Vigst.10G062000.01

Transcript Overview


Name	Vigst.10G062000.01
Unique Name	drVigStip.JP252948.2.0.Vigst.10G062000.01
Type	mRNA
Organism	Vigna stipulacea ()
Sequence length	414

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr10	chromosome	Chr10:13601504..13607625 -	Vigna stipulacea acc. JP252948 genome v2.a1	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna stipulacea acc. JP252948 genome v2.a1	2024-06-27
Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt TrEMBL	2024-08-17
Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt Swissprot	2024-08-17
InterProScan Analysis for Vigna stipulacea acc. JP252948 genome v1.0	2024-08-17
Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs arabidopsis Araport11	2024-08-17

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
vstvvaR149	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vstvvaR160	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vstvvaR179	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
anvstL0240	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjvstL190	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjvstL198	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anvstL0544	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvstL0548	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvstL0589	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvstL0594	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjvstL483	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anvstL0899	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjvstL594	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anvstL1079	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
psvstL131	Pisum sativum Cameor genome v1a	Pisum sativum
psvstL141	Pisum sativum Cameor genome v1a	Pisum sativum
psvstL350	Pisum sativum Cameor genome v1a	Pisum sativum
pvvstL275	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
psvstL424	Pisum sativum Cameor genome v1a	Pisum sativum
carvstL423	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
pvvstL391	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
pvvstL475	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
carvstL679	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
carvstL685	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
carvstL778	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
pvvstL864	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
vstvstL009	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vstvstL013	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vfhvstL036	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vstvstR111	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vssvstL034	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vfhvstL133	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vfhvstL235	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vstvuR099	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
vstvuR119	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
vstvuR122	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
vrvvstL365	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
vstvumR111	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vstvumR120	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vstvumR134	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vstvumR146	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vstvumR151	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vssvstL347	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vfhvstL542	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vfhvstL547	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vrvvstL545	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
vssvstL735	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vssvstL738	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vasvstL018	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
vasvstL027	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
vasvstL128	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
vasvstL226	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis

Orthologs


Gene/Transcript	Assembly	Species
rna-TanjilR_20740	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
rna-TanjilR_15937	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
XM_058918848.1	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
XM_058891650.1	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
jg17727.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Vfaba.Hedin2.R1.1g307360.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
Vum_10G00765.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
Vigan.10G098600.01	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
Vigun02g076900.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
jg43302.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Vfaba.Hedin2.R1.4g091480.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
evm.Ca_v2.0_21369	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
evm.Ca_v2.0_23930	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
rna-TanjilR_25578	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Va06G033820.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Vigst.10G062000	drVigStip.JP252948.2.0.Vigst.10G062000	Vigna stipulacea	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
nbis-exon-127495	drVigStip.JP252948.2.0.nbis-exon-127495	Vigna stipulacea	exon
nbis-exon-127496	drVigStip.JP252948.2.0.nbis-exon-127496	Vigna stipulacea	exon
nbis-exon-127497	drVigStip.JP252948.2.0.nbis-exon-127497	Vigna stipulacea	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
three_prime_utr-18162	drVigStip.JP252948.2.0.three_prime_utr-18162	Vigna stipulacea	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
cds-123108	drVigStip.JP252948.2.0.cds-123108	Vigna stipulacea	CDS
cds-123107	drVigStip.JP252948.2.0.cds-123107	Vigna stipulacea	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
five_prime_utr-19244	drVigStip.JP252948.2.0.five_prime_utr-19244	Vigna stipulacea	five_prime_UTR
five_prime_utr-19243	drVigStip.JP252948.2.0.five_prime_utr-19243	Vigna stipulacea	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
drVigStip.JP252948.2.0.Vigst.10G062000.01	drVigStip.JP252948.2.0.Vigst.10G062000.01	Vigna stipulacea	polypeptide
drVigStip.JP252948.2.0.Vigst.10G062000.01	drVigStip.JP252948.2.0.Vigst.10G062000.01-protein	Vigna stipulacea	polypeptide

Homology

[Close]

BLAST of Vigst.10G062000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9USF0|A0A0L9USF0_PHAAN (Single-stranded DNA binding protein Ssb-like OB fold domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0241990 PE=4 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 9.545e-96
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0

Query:    1 MADSKSGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRLAVDKWGRVEVKEPASFTVKEDNNLSLIEYELVNVVVE 137
            MADSKSGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRLAVDKWGRVEVKEPASFTVKEDNNLSLIEYELVNVVVE
Sbjct:    1 MADSKSGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRLAVDKWGRVEVKEPASFTVKEDNNLSLIEYELVNVVVE 137

[Close]

BLAST of Vigst.10G062000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3VWS6|A0A1S3VWS6_VIGRR (Uncharacterized protein At4g28440 OS=Vigna radiata var. radiata OX=3916 GN=LOC106779010 PE=4 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 9.545e-96
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0

Query:    1 MADSKSGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRLAVDKWGRVEVKEPASFTVKEDNNLSLIEYELVNVVVE 137
            MADSKSGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRLAVDKWGRVEVKEPASFTVKEDNNLSLIEYELVNVVVE
Sbjct:    1 MADSKSGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRLAVDKWGRVEVKEPASFTVKEDNNLSLIEYELVNVVVE 137

[Close]

BLAST of Vigst.10G062000.01 vs. ExPASy TrEMBL (2024)
Match: tr|V7CJI7|V7CJI7_PHAVU (Single-stranded DNA binding protein Ssb-like OB fold domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G071400g PE=4 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 8.883e-94
Identity = 134/137 (97.81%), Postives = 135/137 (98.54%), Query Frame = 0

Query:    1 MADSKSGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRLAVDKWGRVEVKEPASFTVKEDNNLSLIEYELVNVVVE 137
            MADSKSGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLM+EGATVILRNAKIDMFKGSMRLAVDKWGRVEV EPASFT KEDNNLSLIEYELVNVVVE
Sbjct:    1 MADSKSGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTAKEDNNLSLIEYELVNVVVE 137

[Close]

BLAST of Vigst.10G062000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6LNY0|A0A4D6LNY0_VIGUN (Replication factor A1 OS=Vigna unguiculata OX=3917 GN=DEO72_LG4g1589 PE=4 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.282e-94
Identity = 134/137 (97.81%), Postives = 136/137 (99.27%), Query Frame = 0

Query:    1 MADSKSGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRLAVDKWGRVEVKEPASFTVKEDNNLSLIEYELVNVVVE 137
            MADSKSGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLM+EGATVILRNAKIDMFKGSMRLAVDKWGRVEV EPASF+VKEDNNLSLIEYELVNVVVE
Sbjct:    1 MADSKSGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGSMRLAVDKWGRVEVTEPASFSVKEDNNLSLIEYELVNVVVE 137

[Close]

BLAST of Vigst.10G062000.01 vs. ExPASy TrEMBL (2024)
Match: tr|C6SXP0|C6SXP0_SOYBN (Single-stranded DNA binding protein Ssb-like OB fold domain-containing protein OS=Glycine max OX=3847 GN=100499877 PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 7.553e-93
Identity = 132/137 (96.35%), Postives = 135/137 (98.54%), Query Frame = 0

Query:    1 MADSKSGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRLAVDKWGRVEVKEPASFTVKEDNNLSLIEYELVNVVVE 137
            MADSK+GLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVD+M+E ATVILRNAKIDMFKGSMRLAVDKWGRVEV EPASFTVKEDNNLSLIEYELVNVVVE
Sbjct:    1 MADSKAGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDMMKEAATVILRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTVKEDNNLSLIEYELVNVVVE 137

[Close]

BLAST of Vigst.10G062000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TGI4|A0A151TGI4_CAJCA (Uncharacterized protein At4g28440 family OS=Cajanus cajan OX=3821 GN=KK1_012448 PE=4 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 1.542e-92
Identity = 133/137 (97.08%), Postives = 134/137 (97.81%), Query Frame = 0

Query:    1 MADSKSGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRLAVDKWGRVEVKEPASFTVKEDNNLSLIEYELVNVVVE 137
            MADSK GLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGR DGPQSRQMRIAECLVGDETGMIIFTARNDQVDLM+EGATVILRNAKIDMFKGSMRLAVDKWGRVEV EPASFTVKEDNNLSLIEYELVNVVVE
Sbjct:    1 MADSKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRPDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTVKEDNNLSLIEYELVNVVVE 137

[Close]

BLAST of Vigst.10G062000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445LJ63|A0A445LJ63_GLYSO (Single-stranded DNA binding protein Ssb-like OB fold domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_002859 PE=4 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 2.850e-92
Identity = 131/137 (95.62%), Postives = 134/137 (97.81%), Query Frame = 0

Query:    1 MADSKSGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRLAVDKWGRVEVKEPASFTVKEDNNLSLIEYELVNVVVE 137
            MADSK+GLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVD+M+E ATVILRNAKIDMFKGSMR AVDKWGRVEV EPASFTVKEDNNLSLIEYELVNVVVE
Sbjct:    1 MADSKAGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDMMKEAATVILRNAKIDMFKGSMRFAVDKWGRVEVTEPASFTVKEDNNLSLIEYELVNVVVE 137

[Close]

BLAST of Vigst.10G062000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371H466|A0A371H466_MUCPR (Single-stranded DNA binding protein Ssb-like OB fold domain-containing protein OS=Mucuna pruriens OX=157652 GN=CR513_19787 PE=4 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 3.181e-92
Identity = 132/137 (96.35%), Postives = 134/137 (97.81%), Query Frame = 0

Query:    1 MADSKSGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRLAVDKWGRVEVKEPASFTVKEDNNLSLIEYELVNVVVE 137
            MADSK GLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGR DGPQSRQMRIAECLVGDETGM+IFTARNDQVDLM+EGATVILRNAKIDMFKGSMRLAVDKWGRVEV EPASFTVKEDNNLSLIEYELVNVVVE
Sbjct:    1 MADSKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRPDGPQSRQMRIAECLVGDETGMVIFTARNDQVDLMKEGATVILRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTVKEDNNLSLIEYELVNVVVE 137

[Close]

BLAST of Vigst.10G062000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TGI6|A0A151TGI6_CAJCA (Uncharacterized protein At4g28440 family OS=Cajanus cajan OX=3821 GN=KK1_012449 PE=4 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 3.181e-92
Identity = 132/137 (96.35%), Postives = 134/137 (97.81%), Query Frame = 0

Query:    1 MADSKSGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRLAVDKWGRVEVKEPASFTVKEDNNLSLIEYELVNVVVE 137
            MADSK GLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGR DGPQSRQMRIAECLVGDETGM+IFTARNDQVDLM+EGATVILRNAKIDMFKGSMRLAVDKWGRVEV EPASFTVKEDNNLSLIEYELVNVVVE
Sbjct:    1 MADSKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRPDGPQSRQMRIAECLVGDETGMVIFTARNDQVDLMKEGATVILRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTVKEDNNLSLIEYELVNVVVE 137

[Close]

BLAST of Vigst.10G062000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86RXW6|A0AA86RXW6_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS5271 PE=4 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 2.504e-91
Identity = 131/137 (95.62%), Postives = 134/137 (97.81%), Query Frame = 0

Query:    1 MADSKSGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRLAVDKWGRVEVKEPASFTVKEDNNLSLIEYELVNVVVE 137
            M+DSK GLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARN+QVDLM+EGA VILRNAKIDMFKGSMRLAVDKWGRVEV EPASFTVKEDNNLSLIEYELVNVVVE
Sbjct:    1 MSDSKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNEQVDLMKEGAIVILRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTVKEDNNLSLIEYELVNVVVE 137

[Close]

BLAST of Vigst.10G062000.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|O49453|Y4844_ARATH (Uncharacterized protein At4g28440 OS=Arabidopsis thaliana OX=3702 GN=At4g28440 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.608e-61
Identity = 90/132 (68.18%), Postives = 106/132 (80.30%), Query Frame = 0

Query:    9 RKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQS------RQMRIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRLAVDKWGRVEVKEPASFTVKEDNNLSLIEYELVNV 134
            RKPVF KV+QL+PGT+GHTLTVKV+ A +V+   R   P S      +  RI ECL+GDETG I+FTARNDQVDLM+ GATVILRN++IDMFKG+MRL VDKWGR+E    ASFTVKEDNNLSL+EYEL+NV
Sbjct:   18 RKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRIVECLIGDETGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATGAASFTVKEDNNLSLVEYELINV 149

[Close]

BLAST of Vigst.10G062000.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:8400638-8401171 FORWARD LENGTH=137)

HSP 1 Score: 237.269 bits (604), Expect = 6.405e-82
Identity = 110/136 (80.88%), Postives = 127/136 (93.38%), Query Frame = 0

Query:    1 MADS-KSGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRLAVDKWGRVEVKEPASFTVKEDNNLSLIEYELVNVV 135
            MADS K+GL+KP FTKVDQLRPGTSGH + VK+V+ KMV+QKGR+DGPQ+RQ+RI+EC+VGDETG+I+FTARNDQVDLM+EG+TV LRNAKIDM+KGSMRLAVDKWGRVEV EPASF VKED N+SLIEYELVNVV
Sbjct:    1 MADSTKAGLKKPAFTKVDQLRPGTSGHNVNVKIVSTKMVLQKGRADGPQARQLRISECIVGDETGVIVFTARNDQVDLMKEGSTVTLRNAKIDMYKGSMRLAVDKWGRVEVTEPASFKVKEDTNMSLIEYELVNVV 136

[Close]

BLAST of Vigst.10G062000.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:3502324-3502991 REVERSE LENGTH=139)

HSP 1 Score: 220.32 bits (560), Expect = 4.064e-75
Identity = 107/137 (78.10%), Postives = 123/137 (89.78%), Query Frame = 0

Query:    1 MADSKSGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKG--RSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRLAVDKWGRVEV-KEPASFTVKEDNNLSLIEYELVNV 134
            MA++ S LRKPVFTKV++LRPGT+GH+L VKVVN KMVMQ+G  R  GPQSRQMRIAECLVGDETG+IIFTARNDQVD+M+EG+ V LRNAKIDM+KGSMRLAVD+WGRVEV +EP   TVK+DNNLSLIEYELV+V
Sbjct:    1 MAEATSALRKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMRIAECLVGDETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDITVKDDNNLSLIEYELVSV 137

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Query:    1 MADSKSGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKG--RSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRLAVDKWGRVEV-KEPASFTVKEDNNLSLIEYELVNV 134
            MA++ S LRKPVFTKV++LRPGT+GH+L VKVVN KMVMQ+G  R  GPQSRQMRIAECLVGDETG+IIFTARNDQVD+M+EG+ V LRNAKIDM+KGSMRLAVD+WGRVEV +EP   TVK+DNNLSLIEYELV+V
Sbjct:    1 MAEATSALRKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMRIAECLVGDETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDITVKDDNNLSLIEYELVSV 137

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BLAST of Vigst.10G062000.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:3502324-3503033 REVERSE LENGTH=153)

HSP 1 Score: 219.935 bits (559), Expect = 8.778e-75
Identity = 107/137 (78.10%), Postives = 123/137 (89.78%), Query Frame = 0

Query:    1 MADSKSGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKG--RSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRLAVDKWGRVEV-KEPASFTVKEDNNLSLIEYELVNV 134
            MA++ S LRKPVFTKV++LRPGT+GH+L VKVVN KMVMQ+G  R  GPQSRQMRIAECLVGDETG+IIFTARNDQVD+M+EG+ V LRNAKIDM+KGSMRLAVD+WGRVEV +EP   TVK+DNNLSLIEYELV+V
Sbjct:   15 MAEATSALRKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMRIAECLVGDETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDITVKDDNNLSLIEYELVSV 151

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BLAST of Vigst.10G062000.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:14317781-14318712 FORWARD LENGTH=182)

HSP 1 Score: 199.519 bits (506), Expect = 2.772e-66
Identity = 98/131 (74.81%), Postives = 108/131 (82.44%), Query Frame = 0

Query:    9 RKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQK-GRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRLAVDKWGRVEVKEPASFTVKEDNNLSLIEYELVNVVVE* 138
            +KPVF KVDQL+PGTSGHTLTVKVV+   V QK G +     R  RI+ECLVGDET  I+FTARNDQV+LM+ GATV LRNAKIDMFKGSMRLAVDKWGR+E  EPA  TVKEDNNLSL+EYELVNVV E*
Sbjct:   53 KKPVFVKVDQLKPGTSGHTLTVKVVDQNSVPQKPGAASSSHLRPARISECLVGDETACILFTARNDQVELMKPGATVNLRNAKIDMFKGSMRLAVDKWGRIEATEPADITVKEDNNLSLVEYELVNVVEE* 183

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BLAST of Vigst.10G062000.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:14060054-14060970 FORWARD LENGTH=153)

HSP 1 Score: 188.348 bits (477), Expect = 2.722e-62
Identity = 90/132 (68.18%), Postives = 106/132 (80.30%), Query Frame = 0

Query:    9 RKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQS------RQMRIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRLAVDKWGRVEVKEPASFTVKEDNNLSLIEYELVNV 134
            RKPVF KV+QL+PGT+GHTLTVKV+ A +V+   R   P S      +  RI ECL+GDETG I+FTARNDQVDLM+ GATVILRN++IDMFKG+MRL VDKWGR+E    ASFTVKEDNNLSL+EYEL+NV
Sbjct:   18 RKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRIVECLIGDETGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATGAASFTVKEDNNLSLVEYELINV 149

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BLAST of Vigst.10G062000.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:8400749-8401171 FORWARD LENGTH=100)

HSP 1 Score: 182.185 bits (461), Expect = 1.293e-60
Identity = 83/99 (83.84%), Postives = 95/99 (95.96%), Query Frame = 0

Query:   37 MVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRLAVDKWGRVEVKEPASFTVKEDNNLSLIEYELVNVV 135
            MV+QKGR+DGPQ+RQ+RI+EC+VGDETG+I+FTARNDQVDLM+EG+TV LRNAKIDM+KGSMRLAVDKWGRVEV EPASF VKED N+SLIEYELVNVV
Sbjct:    1 MVLQKGRADGPQARQLRISECIVGDETGVIVFTARNDQVDLMKEGSTVTLRNAKIDMYKGSMRLAVDKWGRVEVTEPASFKVKEDTNMSLIEYELVNVV 99

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BLAST of Vigst.10G062000.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:958759-959609 FORWARD LENGTH=143)

HSP 1 Score: 168.703 bits (426), Expect = 1.176e-54
Identity = 80/127 (62.99%), Postives = 98/127 (77.17%), Query Frame = 0

Query:    9 RKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQM---RIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRLAVDKWGRVEVKEPASFTVKEDNNLSLIEYELV 132
            RKPVF KVDQL+PGTSGHTL VKV+ +  V    R      + +   RIAECL+GD+TG I+FTARNDQVDLM+ GATVILRNAKID+FK +MR+AVD+WGR+E+  P SF V   NNLSL+EYE++
Sbjct:   15 RKPVFVKVDQLKPGTSGHTLIVKVLESNPVKPAIRKSSLTQQPISSPRIAECLIGDDTGCILFTARNDQVDLMKTGATVILRNAKIDLFKDTMRMAVDRWGRIEITGPVSFEVNRANNLSLVEYEVI 141

The following BLAST results are available for this feature:

BLAST of Vigst.10G062000.01 vs. ExPASy TrEMBL (2024)
BLAST of Vigst.10G062000.01 vs. ExPASy Swiss-Prot (2024)
BLAST of Vigst.10G062000.01 vs. Araport11

BLAST of Vigst.10G062000.01 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
tr\|A0A0L9USF0\|A0A0L9USF0_PHAAN	9.545e-96	100.00	Single-stranded DNA binding protein Ssb-like OB fo...	[more]
tr\|A0A1S3VWS6\|A0A1S3VWS6_VIGRR	9.545e-96	100.00	Uncharacterized protein At4g28440 OS=Vigna radiata...	[more]
tr\|V7CJI7\|V7CJI7_PHAVU	8.883e-94	97.81	Single-stranded DNA binding protein Ssb-like OB fo...	[more]
tr\|A0A4D6LNY0\|A0A4D6LNY0_VIGUN	9.282e-94	97.81	Replication factor A1 OS=Vigna unguiculata OX=3917...	[more]
tr\|C6SXP0\|C6SXP0_SOYBN	7.553e-93	96.35	Single-stranded DNA binding protein Ssb-like OB fo...	[more]
tr\|A0A151TGI4\|A0A151TGI4_CAJCA	1.542e-92	97.08	Uncharacterized protein At4g28440 family OS=Cajanu...	[more]
tr\|A0A445LJ63\|A0A445LJ63_GLYSO	2.850e-92	95.62	Single-stranded DNA binding protein Ssb-like OB fo...	[more]
tr\|A0A371H466\|A0A371H466_MUCPR	3.181e-92	96.35	Single-stranded DNA binding protein Ssb-like OB fo...	[more]
tr\|A0A151TGI6\|A0A151TGI6_CAJCA	3.181e-92	96.35	Uncharacterized protein At4g28440 family OS=Cajanu...	[more]
tr\|A0AA86RXW6\|A0AA86RXW6_9FABA	2.504e-91	95.62	Uncharacterized protein OS=Sphenostylis stenocarpa...	[more]

BLAST of Vigst.10G062000.01 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt Swissprot)
Total hits: 1

Position :

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Match Name	E-value	Identity	Description
sp\|O49453\|Y4844_ARATH	2.608e-61	68.18	Uncharacterized protein At4g28440 OS=Arabidopsis t...	[more]

BLAST of Vigst.10G062000.01 vs. Araport11
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs arabidopsis Araport11)
Total hits: 8

Position :

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Match Name	E-value	Identity	Description
\|	6.405e-82	80.88	Symbols: no symbol available \| no full name availa...	[more]
\|	4.064e-75	78.10	Symbols: no symbol available \| no full name availa...	[more]
\|	4.064e-75	78.10	Symbols: no symbol available \| no full name availa...	[more]
\|	8.778e-75	78.10	Symbols: no symbol available \| no full name availa...	[more]
\|	2.772e-66	74.81	Symbols: no symbol available \| no full name availa...	[more]
\|	2.722e-62	68.18	Symbols: no symbol available \| no full name availa...	[more]
\|	1.293e-60	83.84	Symbols: no symbol available \| no full name availa...	[more]
\|	1.176e-54	62.99	Symbols: no symbol available \| no full name availa...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vigna stipulacea acc. JP252948 genome v1.0
Date Performed: 2024-08-17

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	FUNFAM	G3DSA:2.40.50.140:FF:000240		coord: 23..126 e-value: 5.3E-57 score: 192.1
None	No IPR available	PANTHER	PTHR31472	OS05G0244600 PROTEIN	coord: 4..135
None	No IPR available	CDD	cd04491	SoSSB_OBF	coord: 27..111 e-value: 7.6174E-17 score: 68.4185
IPR048970	Single-stranded DNA binding protein Ssb-like, OB fold	PFAM	PF21473	Ssb-like_OB	coord: 19..110 e-value: 1.9E-43 score: 157.9
IPR012340	Nucleic acid-binding, OB-fold	GENE3D	2.40.50.140		coord: 23..126 e-value: 9.9E-44 score: 149.8
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 6..135

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr10:13601504..13607625-
coding sequence from alignment at Chr10:13601504..13607625-

mRNA sequence

>drVigStip.JP252948.2.0.Vigst.10G062000.01 ID=drVigStip.JP252948.2.0.Vigst.10G062000.01; Name=Vigst.10G062000.01; organism=Vigna stipulacea; type=mRNA; length=414bp
ATGGCAGATTCAAAATCAGGATTGAGGAAGCCCGTATTCACCAAGGTGGA
TCAGCTTCGCCCTGGGACAAGTGGGCACACTTTAACTGTGAAGGTGGTCA
ATGCTAAGATGGTGATGCAGAAAGGTCGTTCTGATGGTCCTCAGTCCCGT
CAAATGCGAATTGCTGAATGTTTGGTTGGTGATGAGACTGGAATGATCAT
ATTCACTGCCAGAAATGATCAAGTGGATTTGATGGAAGAGGGTGCTACTG
TGATCCTGCGAAATGCCAAAATTGACATGTTCAAAGGATCAATGAGGCTT
GCTGTGGACAAGTGGGGCCGAGTGGAAGTGAAAGAACCTGCTAGTTTCAC
TGTTAAGGAAGATAACAACCTGTCTCTCATCGAGTATGAACTTGTGAATG
TTGTTGTAGAATGA

protein sequence of drVigStip.JP252948.2.0.Vigst.10G062000.01

>drVigStip.JP252948.2.0.Vigst.10G062000.01 ID=drVigStip.JP252948.2.0.Vigst.10G062000.01; Name=drVigStip.JP252948.2.0.Vigst.10G062000.01; organism=Vigna stipulacea; type=polypeptide; length=138bp
MADSKSGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSR
QMRIAECLVGDETGMIIFTARNDQVDLMEEGATVILRNAKIDMFKGSMRL
AVDKWGRVEVKEPASFTVKEDNNLSLIEYELVNVVVE*

mRNA from alignment at Chr10:13601504..13607625-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>drVigStip.JP252948.2.0.Vigst.10G062000.01 ID=drVigStip.JP252948.2.0.Vigst.10G062000.01; Name=Vigst.10G062000.01; organism=Vigna stipulacea; type=mRNA; length=6122bp; location=Sequence derived from: Chr10:13601504..13607625- (Vigna stipulacea
TCTGGTGTCTCAATTGAGGACAAAACGCGGAAATGCGTGACGACTATAGC
TATCCCTTTCACTTATTAAAACTTGACATCTCAGTCTGAGTATCAGTTCC
TCATCTTTCTCTTCCCTCACAAATTTTCAGGTTGCATTCCAATCTCCTTC
CCTTATTCCCATATCTTTCAATTTTCATGTCCCTTTTCACTTCATTACTT
GTTTGCTTTACACTCATGCATGCTTTCTTGTGAAAGAACTTCATTTTTGA
CTGTTGGGTTTCTCGAATTTATTTTGCTTTTTTTTTTTCATATGAATGTT
ATTTCAAACTTCTTAAACATGTTTGATGGAACTGATAAATTGGTATGAGT
TTGGATCTTATGCTCTACCCTTTTACTAAACGGATATTATTATCAATTTA
TGTTCCTGAGATATTGAAAATTTCTGAACTTTCTTGCCCCTTCAACCTGG
GGTTAGGTTAGGTAAGGTTGAGTTATGTATTAAGGTTTTTCTAGGGAGGA
ATAATGTGTTTTTCTGCAGTTTTATGCTGTCTTAGTGGAGGTTCTTGTGC
TTTTGTAGGATTTGAAGCATGGCAGATTCAAAATCAGGATTGAGGAAGCC
CGTATTCACCAAGGTGGATCAGCTTCGCCCTGGGACAAGTGGGCACACTT
TAACTGTGAAGGTGGTCAATGCTAAGATGGTGATGCAGAAAGGTCGTTCT
GATGGTCCTCAGTCCCGTCAAATGCGAATTGCTGAATGTTTGGTTGGTGA
TGAGACTGGAATGATCATATTCACTGCCAGAAATGATCAAGGTATATATG
TGTTATTGCTTTCACAAAGCTGTCCATTATCATGTTTTCTGTCGCTGCAT
GGTGTTTTTTTATTGTTGTCATTGTGTTTTTCTTTGGCTGGGCGAAGACG
CGTTATTTATTTGGTTGTTTTGCACTGAATAAGCGCATGTCATGTGTCTA
GTGTCCTGTTTTGTCCATTTTTTGGCAATCTTCCATTTCCATTTCTGTTT
TGATATCGGTTAGTTCTGGACATTCATCTGTCCAGGGACATGTATTAGTT
GCTTTATTCCATGAATTTCATGTGCGTCTTTAGTTACTGCTTTGTGGTAT
GTGCTGTGAACTGAAGGTGAATTGTTCTGAGCTATAACAGATACTTCACT
TTGCTTATCTATGCAGTTTTGGATATATAAATCACCAAAAAGCACTTCTA
TGTTTTTTTCTTACATATCTGACACTGCTTGTTATTATGAGATGCCTAAG
TTCTACATTGAGTAGAATAAGATATTCGGTATACTGAAATATATAAGAGC
TGTCAATGAGGAAGTTGAGTGAAGTGTCACCAAGTGAAATGTTGTAGAGA
AGTTGTGACGGTGTTGGCTCTTGGGGATGTGCTGTTAGGGATTCGAGTAT
TGTAGATCTAAGTCCCTCATTGAACAATAGGAGATGCTTGGTGGAGTATG
TAAGTGTTTGGATTTGATATGTTTTGGTGAAGTGTCAAGTCAAGCATTTT
ATGAAATTTTAATGCAACTATATGAAACATATAAGGATGTGCGATGAAGA
AACATTGTCCCTAGATATACCAAATATACAAGTTGTTCTCTTCGTAGATG
ATTTTAAGAAAGGAATGAGATTTATGGTAGTACTCATATATGTCAATGGT
AGAAAGTAATTTATGATGCAATGGGTTTTAATTTTTTATTTACTTTAGCA
ATATATAAGAAAGATGTTTTAAATTTTGATTTGCAGAATTGTAGTTACAT
ATTTATTATGTCTTATGAATTTTTAGATATTTTTAAATATGTATCTTATA
TGTATCATACCCTCCATATCAAACCTGATATGTATCCGATATGCATAATG
TATCTGTGCATCATTGGTCTTGAACGTTTATAGATTTGTTTTTAAAAAGA
AACTTCTATAAAAGATAGATATCTATTTAGTTATTGGAATTCTATAGAGA
ATTTACCATATGAAGTTTTCCGGAAGTCCCAGGTTTGTAGTTAATTGTGC
ACTAGATGATCTAAATAACTGGAAAAATTTATGCAATAGAGGAATCAGTG
TAAGTGCTGTTGCGTGTTTTTCTTGTTTCTTGTACCCAAAATATCCTAAT
TAATGTCCATTATTATTTTCTTGCAGTAACGTCATCAACCATATAAACAT
TTTGTCTCAAAATTTTATAGAAATTAGGATAAAATAAGGAATAATCTGTC
TTTTCCTATTTGGGTTTAGCATATTTAAACCAGTCTGTTGTTAACTTGTT
ATCCGACTAAAAAAGCTCAAATTCCTGTTTGGCAGCATTTGGTAACAATA
GAAAGATCTCTATATAATGTACACATATAGTTATCAAAGGAAAACGTAAT
TTTTAGTTGTAGGAAAACGCAGTTTCTTAGTAATCTAAATCTTCTGATAT
GTTTCAGGGTCTCTCCCAATTCACTCTGTGATCTATTTTTTTGGTTCTTG
TGAGTTTCTTGATTATTTTATCCAATTATTTGTGTATTATGTGTTGTATT
TAGAAATGACATGAATATCATAACAATTCTGTTGTTGTATAGTTAATGTT
CCGTATGCCAAATAATCTAAGTTGTGGATTAAGAGTACATTCACATGCCT
GTTAGAGTAGATCAGTCCTACAATTAGTTAAATCTGAGTAAATTTGCAGT
AGTTGACATGTGTTAATTTCCTTTGGTTGTTGTACACGTATGTGTAATGG
AGAATTTTTACATCCTTGAGGATATGATGGCACACTTCTCTTTTGCAATG
ATAAAGAAAAATTGTGTGCTATGTATCCTACATTGTTGGTGATAAATGAT
TCAACAATAAATATAAAAAAATGATAGATTTTCCACCCTTCTAATGTTGA
AATGTTTCTTTGCTTCTGTATGGTATGGTTATTTTTCTTGAACTCAGAAA
AGGTGTAAGACTTGAAGTACTGGGGAGATATAGAAATGAAAAACTGATGT
AATTGGGGGAACAATGGTAGCAAAAGACACAACAATGTCATTCAGGGCAT
TCCCTAATTTTGCCTGTCTTGCTTTTTTTTTTTTTTTTCCGGTAAACTAC
ATTTCAGGATCTAGGGCAGAGAAGCCCAGCTTTGTTATTTTTCTACAAGT
TATTGCCTTCTGGTTTATACTACTTTCTTGGTTCAACTAAAATATATCAA
GGTCTCATCGGTAATTTTATTGTTTAAGAGTGGTTGTCTAGAATTTGTAC
AGTGTTTTAGTGTAGTTACTAAAACTTCATTGGCTGATTCAATTGGGAAT
CAGTTAGGTCACTTATCTAAATAACATAAAAAAGATGTTGGAGAAAAAGA
CTAGTTAAAAGGTATCCAAAACCAGGTAAGAACCACTGCAAAAAACTGAT
GAAACTTTACCTCAAATATTTTTATTTTTTATTCTAAAACATGTTTAAAA
TGATTAAACGATCTTAGGTTTATATGTAAGATCTATCTATAGATTGCTAT
TTTATTTTTATTTTTTTGTATTTTTACCATCATTACATCCATATAAATTG
CTATTTTTCTTTTACTTTTTACCTAATTTATTTTGCATTAGTTTATTGCT
TGTTATATTATAATATTAAAGATATATATATATATATATATATATATATA
TATATATATATTGTTATGCTAATTTAACCACAATTGAAGCCGATCAATGT
GCAGTTTTGAAGACTTTGGTTTAGTTTTGTTGGGTTTCATAATTGACAAC
GCTTTTTAAACTCTTGCTTTCGTTAAAAGTTTCATCATGTATTCCCTCTC
TATTTCACTTCTTCAGGCCATGGGGACATGCTTGATAGTTTATATTATGT
AATTCTTGAGTTTTATGCTTTTCACTATATTATTGCAACTGAAGACAATA
ACTCAGATTCTCAACAATGGTGGGAGTATTATTGATTGGAACAACTTTTT
TATTATTTATTATTGACGTTTTAAATAGTAAGATAAGTCCTGGTTGTGGT
TTTTTGTTTATCTGAATGAATACTTGAAATGAAATTTTATTCAATTTCTT
TGTTTCTCAGTTATTATTGTTGTGAAATTTAGCAAGCCTTTACAATTTAC
GGCATATATGTGAAATTGGTGGGAAAATTATATATGACCAATTCCTTGTG
CACTTGCATGACATGTGAGTATTGTTTTTTCCAACTCAGGAGTTTATATA
ACTACTGTTTGTATGGGTTTTGTATCGCTACTAAAGAATGACTTTTAGGG
TTGAATTGGGCTTACTTAGTCTAGGATAATCAGGAAATAATGTGTGGGTT
TTGTATCACTACTAAAGAGCTATTTTTGGGGTTTTTGGCGTTGAATTGGG
CTTACACAGTCTGGGAAAATCAGGAAATAATGTGTGTTCCAGTTTCTAAC
AACGTTTTGTATGCCCTTTTGCATATATCTATTACTTAAGCTGTGAATAG
AAACAAATTAAGTTGAGGTTCTTTGGGGAAATGGGAGCGGGTGAAGAGAG
TTTGAGAAGAAAGTTAGAAACGAACAAAAGCTCTATTCCTTGCAAACATT
AAGGAATGAAGCTAGAATTGCAGATGCAATATTGCTTATTCCTGCTTATT
ACTTGTTCCTGCTTTTGAATTCTCCCTATGGCTGAGGTCTGATAAGTGTA
GAACCAAAAGAGAAACTATGTTTACTAATGCGAAATTTTGAAAGAAAGAG
TAGCAAGCATGAAGTGGTTGTCATTTTTTCATGATAGTGAAAGTGTATGC
CTGCTGATTGCTTTCTTTTACATTAAGACTGTCATTTTTTTCATGATAGT
GGAAGTGTATACAATGTTTTTTTGGACCATTACTTTTACTAATAGAAAAA
GTTTAGTATTCTCATGATATTATAGGGATCATATATGACGGAGAACTTAA
ATTTAATAAATAATCGGAAAAGGTAATTACCATTTAGGAAAAAAAATAAC
CAAACCAGTGGTTTGAAATGCTAAAATTGATTGGAACCGATTTTCCCCCC
AAAAGTAACCAGACTAGTTCCCTGGGACAAATAAATGCAGAAAATAAAAG
ATCCAGAGTTCTGTAGATGCACACAATCTCTAGCCCAACCGCATGCCCTT
TTCTTCTCTAGTCATATCTAGCTTGTTGTTTCTTTCACCTTTTAATCACC
TTCTCTTCAACATAATGACACATGTTTCCCTCGGAAATTCTGATACTCAC
TGAGTTTCTCTTCCCTTCATCTACCCTGTTATTACTTGCCGTCCATATTT
TGGTCTAGTGCTTGATGTTATTTACTTATAACTCCGTTGCAATGACTGTT
TATATTTAAAAGTGTTATATTGTATTGTAATTCTCCCTTGACAGAAATAG
TGTAATAGTTGTCAACTTGTATTCAACATGAAAGTTAAAATGAAGTTTTA
GGTTGGAAGTTCAACAACAATCTTGAAAATATTTTATGTAGAATTTTCAA
ATTAAATTGCAATCTAAACGAATATTTAAAGTGTTGGCTTAGTTGTTGAA
CATTTTATTTATGTTCAGTGGATTTGATGGAAGAGGGTGCTACTGTGATC
CTGCGAAATGCCAAAATTGACATGTTCAAAGGATCAATGAGGCTTGCTGT
GGACAAGTGGGGCCGAGTGGAAGTGAAAGAACCTGCTAGTTTCACTGTTA
AGGAAGATAACAACCTGTCTCTCATCGAGTATGAACTTGTGAATGTTGTT
GTAGAATGACTTGTTGGGACATCCTGGAATTTCTAATGAGAATAAAACAA
ATCCAGCAAAGAAATCTAGCTTTGTTTCTTTTTGTATCCGAGACATCTAA
TCATGCTCTTCACAGTTCACCTTAGTCTAGGAATAGGATTTGAGAAGCCA
GTAGTATCAACAGTTGCTTCTTACTGTTGCAGCAAACTATGGATCTTGTA
GCTTCAACCACTGAACAGATACATGTGTAAGTGCAGCAAGAAAATGGGAA
CTGGTTTCCAGATCATACTTTTTTGTTGTGCTATCTATTGACATTTTAGA
TTTATATCTATCTTCATCTACCATGGATTATATCTATCTAATTATTATGT
ATGGTTGGTGGGTGTTTATACTTGATATAATCCATGTTTAACCTCAATCT
TTATCGTGATCTTGATAATCTGTTCAAACAAGTCGAGTTGCACACTCTGA
CTTACCAAGAACCTGTTTAACC

Coding sequence (CDS) from alignment at Chr10:13601504..13607625-

>drVigStip.JP252948.2.0.Vigst.10G062000.01 ID=drVigStip.JP252948.2.0.Vigst.10G062000.01; Name=Vigst.10G062000.01; organism=Vigna stipulacea; type=CDS; length=414bp; location=Sequence derived from: Chr10:13601504..13607625- (Vigna stipulacea
ATGGCAGATTCAAAATCAGGATTGAGGAAGCCCGTATTCACCAAGGTGGA
TCAGCTTCGCCCTGGGACAAGTGGGCACACTTTAACTGTGAAGGTGGTCA
ATGCTAAGATGGTGATGCAGAAAGGTCGTTCTGATGGTCCTCAGTCCCGT
CAAATGCGAATTGCTGAATGTTTGGTTGGTGATGAGACTGGAATGATCAT
ATTCACTGCCAGAAATGATCAAGTGGATTTGATGGAAGAGGGTGCTACTG
TGATCCTGCGAAATGCCAAAATTGACATGTTCAAAGGATCAATGAGGCTT
GCTGTGGACAAGTGGGGCCGAGTGGAAGTGAAAGAACCTGCTAGTTTCAC
TGTTAAGGAAGATAACAACCTGTCTCTCATCGAGTATGAACTTGTGAATG
TTGTTGTAGAATGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR048970	Ssb-like_OB
IPR012340	NA-bd_OB-fold

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Vigst.10G062000.01