Vigst.10G119000.01

Transcript Overview
NameVigst.10G119000.01
Unique NamedrVigStip.JP252948.2.0.Vigst.10G119000.01
TypemRNA
OrganismVigna stipulacea ()
Sequence length486
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr10chromosomeChr10:20384082..20384992 +Vigna stipulacea acc. JP252948 genome v2.a1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vstvvaR131Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvvaR138Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvvaR171Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvstL0536Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvstL0596Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvstL0815Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvstL1078Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvstL1080Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
pvvstL008Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvstL128Pisum sativum Cameor genome v1aPisum sativum
carvstL305Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
psvstL345Pisum sativum Cameor genome v1aPisum sativum
pvvstL273Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvstL396Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
carvstL545Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carvstL684Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carvstL778Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
vstvstL002Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstL031Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vstvstR106Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvstR113Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstL100Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vstvuR099Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vstvuR111Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vstvuR114Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vstvumR110Vigna umbellata FF25 genome v1.0Vigna umbellata
vstvuR135Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvstL369Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vstvumR131Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvstL392Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vstvumR140Vigna umbellata FF25 genome v1.0Vigna umbellata
vstvumR148Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvstL448Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvstL540Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvstL532Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvstL530Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvstL539Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvstL743Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vssvstL734Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvstL861Vicia sativa cv. Studenica genome v1.0Vicia sativa
vasvstL017Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvstL125Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvstL221Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvstL285Vigna angularis cv. Shumari genome v1.a1Vigna angularis

Orthologs
Gene/TranscriptAssemblySpecies
Vigun02g140600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.1g365440.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigan.10G174400.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
evm.Ca_v2.0_23370Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Phvul.002G021800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vum_10G01313.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-XM_014665029.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg3519.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_12957Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Psat2g164680.1Pisum sativum Cameor genome v1aPisum sativum
XM_058921962.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigst.10G119000drVigStip.JP252948.2.0.Vigst.10G119000Vigna stipulaceagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
nbis-exon-130809drVigStip.JP252948.2.0.nbis-exon-130809Vigna stipulaceaexon
nbis-exon-130810drVigStip.JP252948.2.0.nbis-exon-130810Vigna stipulaceaexon
nbis-exon-130811drVigStip.JP252948.2.0.nbis-exon-130811Vigna stipulaceaexon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
five_prime_utr-19755drVigStip.JP252948.2.0.five_prime_utr-19755Vigna stipulaceafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-126302drVigStip.JP252948.2.0.cds-126302Vigna stipulaceaCDS
cds-126303drVigStip.JP252948.2.0.cds-126303Vigna stipulaceaCDS
cds-126304drVigStip.JP252948.2.0.cds-126304Vigna stipulaceaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVigStip.JP252948.2.0.Vigst.10G119000.01drVigStip.JP252948.2.0.Vigst.10G119000.01Vigna stipulaceapolypeptide
drVigStip.JP252948.2.0.Vigst.10G119000.01drVigStip.JP252948.2.0.Vigst.10G119000.01-proteinVigna stipulaceapolypeptide


Homology
[Close]
BLAST of Vigst.10G119000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3VQE9|A0A1S3VQE9_VIGRR (Reticulon-like protein OS=Vigna radiata var. radiata OX=3916 GN=LOC106777448 PE=4 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 1.314e-105
Identity = 154/161 (95.65%), Postives = 157/161 (97.52%), Query Frame = 0 
Query:    1 MEVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPKEKKTE 161
            MEVF+FNFLTVISWVA+LVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIA EVRAWFEKIIRWLVLVSVRKEWPVFVGVVA LWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRI +EKK E
Sbjct:   52 MEVFEFNFLTVISWVAMLVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIATEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAGLWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIAQEKKPE 212
[Close]
BLAST of Vigst.10G119000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3T5L6|A0A0S3T5L6_PHAAN (Reticulon-like protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.10G174400 PE=4 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 2.892e-103
Identity = 151/161 (93.79%), Postives = 155/161 (96.27%), Query Frame = 0 
Query:    1 MEVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPKEKKTE 161
            MEVF+FNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIA EVRAWFEKIIRWLVLVSVRKEWPVF+GVVA   SLSY+G CMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWL+EKYKRCYEIIDEKTIHKIKSRI KEKKTE
Sbjct:   52 MEVFEFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIANEVRAWFEKIIRWLVLVSVRKEWPVFLGVVAGFLSLSYLGSCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLKEKYKRCYEIIDEKTIHKIKSRISKEKKTE 212
[Close]
BLAST of Vigst.10G119000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9URB3|A0A0L9URB3_PHAAN (Reticulon-like protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan06g036500 PE=4 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 6.368e-103
Identity = 150/161 (93.17%), Postives = 155/161 (96.27%), Query Frame = 0 
Query:    1 MEVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPKEKKTE 161
            MEVF+FNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIA EVRAWFEKIIRWLVLVSVRK+WPVF+GVVA   SLSY+G CMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWL+EKYKRCYEIIDEKTIHKIKSRI KEKKTE
Sbjct:   52 MEVFEFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIANEVRAWFEKIIRWLVLVSVRKQWPVFLGVVAGFLSLSYLGSCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLKEKYKRCYEIIDEKTIHKIKSRISKEKKTE 212
[Close]
BLAST of Vigst.10G119000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6LRT7|A0A4D6LRT7_VIGUN (Reticulon-like protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG4g2262 PE=4 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 9.654e-102
Identity = 150/161 (93.17%), Postives = 154/161 (95.65%), Query Frame = 0 
Query:    1 MEVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPKEKKTE 161
            MEVF+FNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEET+RRIA EVRAWFEK IRWLVLV VRK+W VFVGVVA LWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNE+KIKRFGEWLREKYKRC EIIDEKTI KIKSRIPKEKKTE
Sbjct:   52 MEVFEFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETSRRIANEVRAWFEKTIRWLVLVGVRKKWQVFVGVVAGLWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEEKIKRFGEWLREKYKRCCEIIDEKTIQKIKSRIPKEKKTE 212
[Close]
BLAST of Vigst.10G119000.01 vs. ExPASy TrEMBL (2024)
Match: tr|V7CFC6|V7CFC6_PHAVU (Reticulon-like protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G021800g PE=4 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 5.813e-98
Identity = 145/161 (90.06%), Postives = 152/161 (94.41%), Query Frame = 0 
Query:    1 MEVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPKEKKTE 161
            MEVF+FNFL VISWVAILVVASTFLYANMLRLLGKE PNL  LEL+EETTRRIA +VRAW ++ IRWL+LVSVRKEWPVFVGVVA LWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNE+KIKRFGEWLREKYKRCYEIIDEKTI KIKSRIPKEKKTE
Sbjct:   52 MEVFEFNFLAVISWVAILVVASTFLYANMLRLLGKEPPNLSWLELTEETTRRIASKVRAWIQETIRWLLLVSVRKEWPVFVGVVAGLWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEEKIKRFGEWLREKYKRCYEIIDEKTIRKIKSRIPKEKKTE 212
[Close]
BLAST of Vigst.10G119000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0JLJ2|A0A8T0JLJ2_PHAAN (Reticulon-like protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0158290 PE=4 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 9.677e-96
Identity = 151/161 (93.79%), Postives = 155/161 (96.27%), Query Frame = 0 
Query:    1 MEVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPKEKKTE 161
            MEVF+FNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIA EVRAWFEKIIRWLVLVSVRKEWPVF+GVVA   SLSY+G CMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWL+EKYKRCYEIIDEKTIHKIKSRI KEKKTE
Sbjct:   52 MEVFEFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIANEVRAWFEKIIRWLVLVSVRKEWPVFLGVVAGFLSLSYLGSCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLKEKYKRCYEIIDEKTIHKIKSRISKEKKTE 212
[Close]
BLAST of Vigst.10G119000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86RWS1|A0AA86RWS1_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS4550 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.695e-92
Identity = 133/161 (82.61%), Postives = 146/161 (90.68%), Query Frame = 0 
Query:    1 MEVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPKEKKTE 161
            MEVF+FNF+TVISWVAILVVAS FLYANM RLLGKE PNLL+LEL+EETTRR+A +VRAW E+ IRW+ LV  RKEWP FVGVVA L SL+YIG CMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWL+EKYKRCY+IIDEKT+ KIK+RIPKEKK E
Sbjct:   98 MEVFEFNFITVISWVAILVVASIFLYANMRRLLGKEPPNLLKLELTEETTRRVANKVRAWIEEAIRWMFLVGARKEWPAFVGVVAGLLSLAYIGSCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLKEKYKRCYQIIDEKTVQKIKTRIPKEKKAE 258
[Close]
BLAST of Vigst.10G119000.01 vs. ExPASy TrEMBL (2024)
Match: tr|I1J938|I1J938_SOYBN (Reticulon-like protein OS=Glycine max OX=3847 GN=GLYMA_01G183200 PE=4 SV=2)

HSP 1 Score: 257.299 bits (656), Expect = 2.045e-85
Identity = 128/161 (79.50%), Postives = 140/161 (86.96%), Query Frame = 0 
Query:    1 MEVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPKEKKTE 161
            MEVF+FNFL V+SWVAILV+AS FLYANMLRLLGKE PNLLRLE++EETT RIAK VRAW ++ IRWL LV   KEWPVFVG VAAL  LSYIG CMDLLT+VY+G LVGMA+PLTYVKNEDKIKRF  WLREK+KR Y+IIDEKTI KIKSRI KEKKTE
Sbjct:    1 MEVFEFNFLAVVSWVAILVLASIFLYANMLRLLGKEPPNLLRLEVTEETTTRIAKTVRAWIKEAIRWLFLVGAEKEWPVFVGAVAALLLLSYIGSCMDLLTLVYMGTLVGMAVPLTYVKNEDKIKRFVGWLREKHKRYYQIIDEKTIQKIKSRIAKEKKTE 161
[Close]
BLAST of Vigst.10G119000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445HXL9|A0A445HXL9_GLYSO (Reticulon-like protein OS=Glycine soja OX=3848 GN=D0Y65_029106 PE=4 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 8.209e-84
Identity = 127/161 (78.88%), Postives = 139/161 (86.34%), Query Frame = 0 
Query:    1 MEVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPKEKKTE 161
            MEVF+FNFLT+ISWVAIL +AS FLYANMLRLLGKE PNLL LE+SE+TT RIA  VRAW E+ IRWL LV   KEWPVFVG VA L SLSY+G CMDLLT+VY+G LVGMA+PLTYVKNEDKIKRF EWLREK+KR Y+IIDEKTI KIKSRI KEKKTE
Sbjct:   52 MEVFEFNFLTLISWVAILGLASIFLYANMLRLLGKEPPNLLGLEVSEKTTTRIAHTVRAWIEEGIRWLFLVGAEKEWPVFVGAVAGLLSLSYLGSCMDLLTLVYMGTLVGMAVPLTYVKNEDKIKRFVEWLREKHKRYYQIIDEKTIQKIKSRIVKEKKTE 212
[Close]
BLAST of Vigst.10G119000.01 vs. ExPASy TrEMBL (2024)
Match: tr|Q9ZTZ3|Q9ZTZ3_SOYBN (Reticulon-like protein OS=Glycine max OX=3847 GN=547494 PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 8.209e-84
Identity = 127/161 (78.88%), Postives = 139/161 (86.34%), Query Frame = 0 
Query:    1 MEVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPKEKKTE 161
            MEVF+FNFLT+ISWVAIL +AS FLYANMLRLLGKE PNLL LE+SE+TT RIA  VRAW E+ IRWL LV   KEWPVFVG VA L SLSY+G CMDLLT+VY+G LVGMA+PLTYVKNEDKIKRF EWLREK+KR Y+IIDEKTI KIKSRI KEKKTE
Sbjct:   52 MEVFEFNFLTLISWVAILGLASIFLYANMLRLLGKEPPNLLGLEVSEKTTTRIAHTVRAWIEEGIRWLFLVGAEKEWPVFVGAVAGLLSLSYLGSCMDLLTLVYMGTLVGMAVPLTYVKNEDKIKRFVEWLREKHKRYYQIIDEKTIQKIKSRIVKEKKTE 212
[Close]
BLAST of Vigst.10G119000.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|O64837|RTNLM_ARATH (Reticulon-like protein B13 OS=Arabidopsis thaliana OX=3702 GN=RTNLB13 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.317e-25
Identity = 50/145 (34.48%), Postives = 81/145 (55.86%), Query Frame = 0 
Query:    1 MEVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEK 145
            +  + F  +T++SW+ I VV+  FL+ ++LRLL K  P L  LE+SEE      +  R   E+++RW+  V    EW VF   V   W LS IG  +D  T ++IG+++G+ +P  + +  D+I++    L++K K  Y    EK
Sbjct:   42 LSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKVEPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNLLDFHTCLFIGLVMGLTVPKLWEEYGDQIQKHLGSLKDKSKGAYNTTHEK 186
[Close]
BLAST of Vigst.10G119000.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FFS0|RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.388e-22
Identity = 46/156 (29.49%), Postives = 86/156 (55.13%), Query Frame = 0 
Query:    1 MEVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPK 156
             E+F+++ L  +   AI  +A+ FL++N    + K  P++  + + E+   ++   +R    + +  L  ++  K+   F+ V+A LW LS IG C + LT+ Y   ++   IP+ Y K EDK+  +GE    + K+ Y ++DEK + K+ S+IP+
Sbjct:   94 FELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIPR 249
[Close]
BLAST of Vigst.10G119000.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SUR3|RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.254e-20
Identity = 48/160 (30.00%), Postives = 86/160 (53.75%), Query Frame = 0 
Query:    2 EVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPKEKKTE 161
            E+ +++ LT++  V I+V+A  FL++N    + K  P +  + + EE   ++A  +R    +    L  ++  ++   F+  +A LW LS +G C + LT+ YI +++   +PL Y K EDK+   GE    + K+ Y ++DEK + KI     K KK +
Sbjct:  116 ELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSKIPLGPLKNKKKD 275
[Close]
BLAST of Vigst.10G119000.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SUT9|RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 7.193e-20
Identity = 47/160 (29.38%), Postives = 85/160 (53.12%), Query Frame = 0 
Query:    2 EVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPKEKKTE 161
            E+ +++ LT++  V I+ +A  FL++N    + K  P +  + + EE   ++A  +R    + I  L  ++  ++   F+  +A LW LS +G C   LT+ YI +++   +PL Y K EDK+  +GE    + K+ Y ++D K   KI     K+KK +
Sbjct:  112 ELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIPRGPLKDKKKD 271
[Close]
BLAST of Vigst.10G119000.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SH59|RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.038e-17
Identity = 45/156 (28.85%), Postives = 84/156 (53.85%), Query Frame = 0 
Query:    1 MEVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPK 156
             E+ ++N LT+   ++IL +A  FL+++    + K   ++  + + E+   ++A  +R    +    L  ++  ++   F+ V+A LW LS +G   + LT++YI  ++   IP+ Y K EDK+  FGE    + K+ Y   D K + K+ S+IPK
Sbjct:   90 FELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKVMSKIPK 245
[Close]
BLAST of Vigst.10G119000.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|O82352|RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.974e-16
Identity = 40/149 (26.85%), Postives = 81/149 (54.36%), Query Frame = 0 
Query:    2 EVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKI 150
            E+ +++ L+++  ++IL +   FL++N   L+ K  P +  + + EE    +A  +R    +    L  +++ ++   F+ VV  LW +S +G   + LT+VYI  ++   +P+ Y K+EDK+    E   ++ ++ Y + DEK + KI
Sbjct:   95 ELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKI 243
[Close]
BLAST of Vigst.10G119000.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8GYH6|RTNLP_ARATH (Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.869e-16
Identity = 46/161 (28.57%), Postives = 84/161 (52.17%), Query Frame = 0 
Query:    3 VFQFN---FLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPKEKKT 160
            +F+F+   FL+V S V ++V+  +F++A +     ++  +L  L LSEE     A   R     ++     V+V  ++ +F  VV  LW LS IG  + L T++YIG ++ + IP  Y K + K+ +    +  +    Y+I+DE  I ++   + K+K +
Sbjct:   66 IFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSLSKDKDS 226
[Close]
BLAST of Vigst.10G119000.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q6DBN4|RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.159e-15
Identity = 41/149 (27.52%), Postives = 79/149 (53.02%), Query Frame = 0 
Query:    2 EVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKI 150
            E+ +++FL+++  + I  +A+ FL +N    + K  P +  + + EE    I   +R    +    L  +++ ++   F+ VV  LW +S +G   + LT+VYI  +V   +P+ Y K+EDK+    E   ++ K+ Y + DEK + K+
Sbjct:   95 ELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKL 243
[Close]
BLAST of Vigst.10G119000.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LT71|RTNLK_ARATH (Reticulon-like protein B11 OS=Arabidopsis thaliana OX=3702 GN=RTNLB11 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.852e-15
Identity = 37/120 (30.83%), Postives = 69/120 (57.50%), Query Frame = 0 
Query:    6 FNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIK 125
            +N L+ +S V +L+VA  FL+A    +L +  P +  +E+ EE   + A ++R W   ++     +++ +     + V   LW++SY+G  ++ LT+VYIGVL+ ++ P+ Y K +D I 
Sbjct:   53 YNLLSFVSNVLLLLVAIFFLWAKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHID 172
[Close]
BLAST of Vigst.10G119000.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LJQ5|RTNLI_ARATH (Reticulon-like protein B9 OS=Arabidopsis thaliana OX=3702 GN=RTNLB9 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.507e-14
Identity = 41/159 (25.79%), Postives = 81/159 (50.94%), Query Frame = 0 
Query:    1 MEVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPKEKK 159
            MEV ++NF+T+I   ++  +   F+++     L  ERP +  + L E + +++A+     F +I+  L+ V+  ++ P+F     +L+ +S IG   + + +++IG +    +P+ Y   ED +      L  K K+ Y+ +D   + KI     K KK
Sbjct:   65 MEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSKIPRGTVKNKK 223
[Close]
BLAST of Vigst.10G119000.01 vs. Araport11
Match: | (Symbols: RTNLB13 | Reticulan like protein B13 | chr2:10057554-10059042 FORWARD LENGTH=206)

HSP 1 Score: 100.138 bits (248), Expect = 1.363e-26
Identity = 50/145 (34.48%), Postives = 81/145 (55.86%), Query Frame = 0 
Query:    1 MEVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEK 145
            +  + F  +T++SW+ I VV+  FL+ ++LRLL K  P L  LE+SEE      +  R   E+++RW+  V    EW VF   V   W LS IG  +D  T ++IG+++G+ +P  + +  D+I++    L++K K  Y    EK
Sbjct:   42 LSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKVEPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNLLDFHTCLFIGLVMGLTVPKLWEEYGDQIQKHLGSLKDKSKGAYNTTHEK 186
[Close]
BLAST of Vigst.10G119000.01 vs. Araport11
Match: | (Symbols: RTNLB4, BTI3 | VIRB2-interacting protein 3, Reticulan like protein B4 | chr5:16636230-16637472 FORWARD LENGTH=257)

HSP 1 Score: 91.6633 bits (226), Expect = 5.543e-23
Identity = 46/156 (29.49%), Postives = 86/156 (55.13%), Query Frame = 0 
Query:    1 MEVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPK 156
             E+F+++ L  +   AI  +A+ FL++N    + K  P++  + + E+   ++   +R    + +  L  ++  K+   F+ V+A LW LS IG C + LT+ Y   ++   IP+ Y K EDK+  +GE    + K+ Y ++DEK + K+ S+IP+
Sbjct:   94 FELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIPR 249
[Close]
BLAST of Vigst.10G119000.01 vs. Araport11
Match: | (Symbols: BTI1, RTN1, RTNLB1 | VIRB2-interacting protein 1, reticulon 1, Reticulan like protein B1 | chr4:12318070-12319574 FORWARD LENGTH=275)

HSP 1 Score: 87.4261 bits (215), Expect = 3.986e-21
Identity = 49/161 (30.43%), Postives = 87/161 (54.04%), Query Frame = 0 
Query:    2 EVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPKEKKTE* 162
            E+ +++ LT++  V I+V+A  FL++N    + K  P +  + + EE   ++A  +R    +    L  ++  ++   F+  +A LW LS +G C + LT+ YI +++   +PL Y K EDK+   GE    + K+ Y ++DEK + KI     K KK +*
Sbjct:  116 ELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSKIPLGPLKNKKKD* 276
[Close]
BLAST of Vigst.10G119000.01 vs. Araport11
Match: | (Symbols: BTI1, RTN1, RTNLB1 | VIRB2-interacting protein 1, reticulon 1, Reticulan like protein B1 | chr4:12318070-12319574 FORWARD LENGTH=275)

HSP 1 Score: 87.4261 bits (215), Expect = 3.986e-21
Identity = 49/161 (30.43%), Postives = 87/161 (54.04%), Query Frame = 0 
Query:    2 EVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPKEKKTE* 162
            E+ +++ LT++  V I+V+A  FL++N    + K  P +  + + EE   ++A  +R    +    L  ++  ++   F+  +A LW LS +G C + LT+ YI +++   +PL Y K EDK+   GE    + K+ Y ++DEK + KI     K KK +*
Sbjct:  116 ELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSKIPLGPLKNKKKD* 276
[Close]
BLAST of Vigst.10G119000.01 vs. Araport11
Match: | (Symbols: BTI2, RTNLB2, RTN2 | reticulon 2, VIRB2-interacting protein 2, Reticulan like protein B2 | chr4:6838176-6839578 REVERSE LENGTH=271)

HSP 1 Score: 86.6557 bits (213), Expect = 5.457e-21
Identity = 48/161 (29.81%), Postives = 86/161 (53.42%), Query Frame = 0 
Query:    2 EVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPKEKKTE* 162
            E+ +++ LT++  V I+ +A  FL++N    + K  P +  + + EE   ++A  +R    + I  L  ++  ++   F+  +A LW LS +G C   LT+ YI +++   +PL Y K EDK+  +GE    + K+ Y ++D K   KI     K+KK +*
Sbjct:  112 ELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIPRGPLKDKKKD* 272
[Close]
BLAST of Vigst.10G119000.01 vs. Araport11
Match: | (Symbols: RTNLB3, RTN3 | reticulon 3, Reticulan like protein B3 | chr1:23789395-23790669 FORWARD LENGTH=255)

HSP 1 Score: 80.4925 bits (197), Expect = 1.065e-18
Identity = 45/156 (28.85%), Postives = 84/156 (53.85%), Query Frame = 0 
Query:    1 MEVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPK 156
             E+ ++N LT+   ++IL +A  FL+++    + K   ++  + + E+   ++A  +R    +    L  ++  ++   F+ V+A LW LS +G   + LT++YI  ++   IP+ Y K EDK+  FGE    + K+ Y   D K + K+ S+IPK
Sbjct:   90 FELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKVMSKIPK 245
[Close]
BLAST of Vigst.10G119000.01 vs. Araport11
Match: | (Symbols: RTNLB3, RTN3 | reticulon 3, Reticulan like protein B3 | chr1:23789395-23790669 FORWARD LENGTH=271)

HSP 1 Score: 80.4925 bits (197), Expect = 1.269e-18
Identity = 45/156 (28.85%), Postives = 84/156 (53.85%), Query Frame = 0 
Query:    1 MEVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPK 156
             E+ ++N LT+   ++IL +A  FL+++    + K   ++  + + E+   ++A  +R    +    L  ++  ++   F+ V+A LW LS +G   + LT++YI  ++   IP+ Y K EDK+  FGE    + K+ Y   D K + K+ S+IPK
Sbjct:  106 FELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKVMSKIPK 261
[Close]
BLAST of Vigst.10G119000.01 vs. Araport11
Match: | (Symbols: RTNLB5 | reticulon-like B 5 | chr2:18965410-18966940 FORWARD LENGTH=255)

HSP 1 Score: 77.0258 bits (188), Expect = 2.023e-17
Identity = 40/149 (26.85%), Postives = 81/149 (54.36%), Query Frame = 0 
Query:    2 EVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKI 150
            E+ +++ L+++  ++IL +   FL++N   L+ K  P +  + + EE    +A  +R    +    L  +++ ++   F+ VV  LW +S +G   + LT+VYI  ++   +P+ Y K+EDK+    E   ++ ++ Y + DEK + KI
Sbjct:   95 ELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKI 243
[Close]
BLAST of Vigst.10G119000.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:3416101-3417497 REVERSE LENGTH=194)

HSP 1 Score: 75.0998 bits (183), Expect = 3.952e-17
Identity = 46/161 (28.57%), Postives = 84/161 (52.17%), Query Frame = 0 
Query:    3 VFQFN---FLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPKEKKT 160
            +F+F+   FL+V S V ++V+  +F++A +     ++  +L  L LSEE     A   R     ++     V+V  ++ +F  VV  LW LS IG  + L T++YIG ++ + IP  Y K + K+ +    +  +    Y+I+DE  I ++   + K+K +
Sbjct:   34 IFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSLSKDKDS 194
[Close]
BLAST of Vigst.10G119000.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:3416101-3417058 REVERSE LENGTH=193)

HSP 1 Score: 75.0998 bits (183), Expect = 4.494e-17
Identity = 46/161 (28.57%), Postives = 84/161 (52.17%), Query Frame = 0 
Query:    3 VFQFN---FLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETTRRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLLTVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKIKSRIPKEKKT 160
            +F+F+   FL+V S V ++V+  +F++A +     ++  +L  L LSEE     A   R     ++     V+V  ++ +F  VV  LW LS IG  + L T++YIG ++ + IP  Y K + K+ +    +  +    Y+I+DE  I ++   + K+K +
Sbjct:   33 IFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSLSKDKDS 193
The following BLAST results are available for this feature:
BLAST of Vigst.10G119000.01 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3VQE9|A0A1S3VQE9_VIGRR1.314e-10595.65Reticulon-like protein OS=Vigna radiata var. radia... [more]
tr|A0A0S3T5L6|A0A0S3T5L6_PHAAN2.892e-10393.79Reticulon-like protein OS=Vigna angularis var. ang... [more]
tr|A0A0L9URB3|A0A0L9URB3_PHAAN6.368e-10393.17Reticulon-like protein OS=Phaseolus angularis OX=3... [more]
tr|A0A4D6LRT7|A0A4D6LRT7_VIGUN9.654e-10293.17Reticulon-like protein OS=Vigna unguiculata OX=391... [more]
tr|V7CFC6|V7CFC6_PHAVU5.813e-9890.06Reticulon-like protein OS=Phaseolus vulgaris OX=38... [more]
tr|A0A8T0JLJ2|A0A8T0JLJ2_PHAAN9.677e-9693.79Reticulon-like protein OS=Phaseolus angularis OX=3... [more]
tr|A0AA86RWS1|A0AA86RWS1_9FABA3.695e-9282.61Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|I1J938|I1J938_SOYBN2.045e-8579.50Reticulon-like protein OS=Glycine max OX=3847 GN=G... [more]
tr|A0A445HXL9|A0A445HXL9_GLYSO8.209e-8478.88Reticulon-like protein OS=Glycine soja OX=3848 GN=... [more]
tr|Q9ZTZ3|Q9ZTZ3_SOYBN8.209e-8478.88Reticulon-like protein OS=Glycine max OX=3847 GN=5... [more]
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BLAST of Vigst.10G119000.01 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|O64837|RTNLM_ARATH1.317e-2534.48Reticulon-like protein B13 OS=Arabidopsis thaliana... [more]
sp|Q9FFS0|RTNLD_ARATH5.388e-2229.49Reticulon-like protein B4 OS=Arabidopsis thaliana ... [more]
sp|Q9SUR3|RTNLA_ARATH5.254e-2030.00Reticulon-like protein B1 OS=Arabidopsis thaliana ... [more]
sp|Q9SUT9|RTNLB_ARATH7.193e-2029.38Reticulon-like protein B2 OS=Arabidopsis thaliana ... [more]
sp|Q9SH59|RTNLC_ARATH1.038e-1728.85Reticulon-like protein B3 OS=Arabidopsis thaliana ... [more]
sp|O82352|RTNLE_ARATH1.974e-1626.85Reticulon-like protein B5 OS=Arabidopsis thaliana ... [more]
sp|Q8GYH6|RTNLP_ARATH7.869e-1628.57Reticulon-like protein B16 OS=Arabidopsis thaliana... [more]
sp|Q6DBN4|RTNLF_ARATH1.159e-1527.52Reticulon-like protein B6 OS=Arabidopsis thaliana ... [more]
sp|Q9LT71|RTNLK_ARATH3.852e-1530.83Reticulon-like protein B11 OS=Arabidopsis thaliana... [more]
sp|Q9LJQ5|RTNLI_ARATH3.507e-1425.79Reticulon-like protein B9 OS=Arabidopsis thaliana ... [more]
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BLAST of Vigst.10G119000.01 vs. Araport11
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
|1.363e-2634.48Symbols: RTNLB13 | Reticulan like protein B13 | ch... [more]
|5.543e-2329.49Symbols: RTNLB4, BTI3 | VIRB2-interacting protein ... [more]
|3.986e-2130.43Symbols: BTI1, RTN1, RTNLB1 | VIRB2-interacting pr... [more]
|3.986e-2130.43Symbols: BTI1, RTN1, RTNLB1 | VIRB2-interacting pr... [more]
|5.457e-2129.81Symbols: BTI2, RTNLB2, RTN2 | reticulon 2, VIRB2-i... [more]
|1.065e-1828.85Symbols: RTNLB3, RTN3 | reticulon 3, Reticulan lik... [more]
|1.269e-1828.85Symbols: RTNLB3, RTN3 | reticulon 3, Reticulan lik... [more]
|2.023e-1726.85Symbols: RTNLB5 | reticulon-like B 5 | chr2:189654... [more]
|3.952e-1728.57Symbols: no symbol available | no full name availa... [more]
|4.494e-1728.57Symbols: no symbol available | no full name availa... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna stipulacea acc. JP252948 genome v1.0
Date Performed: 2024-08-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003388ReticulonPFAMPF02453Reticuloncoord: 1..129
e-value: 1.2E-27
score: 108.2
IPR003388ReticulonPROSITEPS50845RETICULONcoord: 1..161
score: 19.787802
NoneNo IPR availablePANTHERPTHR10994RETICULONcoord: 2..159

Sequences
The following sequences are available for this feature:

mRNA sequence

>drVigStip.JP252948.2.0.Vigst.10G119000.01 ID=drVigStip.JP252948.2.0.Vigst.10G119000.01; Name=Vigst.10G119000.01; organism=Vigna stipulacea; type=mRNA; length=486bp
ATGGAAGTATTTCAGTTCAACTTCCTCACTGTCATCTCATGGGTTGCCAT
ACTCGTTGTTGCTTCAACATTCCTCTATGCCAATATGCTTAGACTTTTGG
GCAAGGAACGACCAAACTTGTTGAGGTTGGAGTTGAGTGAAGAAACAACT
AGAAGAATAGCAAAGGAAGTTCGAGCATGGTTTGAAAAAATAATAAGGTG
GTTGGTCCTTGTGAGTGTAAGGAAAGAGTGGCCAGTATTTGTGGGGGTTG
TGGCTGCATTGTGGTCACTGTCTTATATAGGAAGATGCATGGACCTGCTT
ACAGTAGTTTATATAGGTGTATTAGTGGGAATGGCAATTCCATTAACTTA
TGTGAAGAACGAGGACAAGATCAAGAGATTTGGGGAGTGGTTAAGGGAGA
AATACAAGAGATGTTATGAGATTATTGATGAGAAGACCATTCATAAGATT
AAAAGCAGAATACCAAAGGAGAAGAAGACAGAGTAA
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protein sequence of drVigStip.JP252948.2.0.Vigst.10G119000.01

>drVigStip.JP252948.2.0.Vigst.10G119000.01 ID=drVigStip.JP252948.2.0.Vigst.10G119000.01; Name=drVigStip.JP252948.2.0.Vigst.10G119000.01; organism=Vigna stipulacea; type=polypeptide; length=162bp
MEVFQFNFLTVISWVAILVVASTFLYANMLRLLGKERPNLLRLELSEETT
RRIAKEVRAWFEKIIRWLVLVSVRKEWPVFVGVVAALWSLSYIGRCMDLL
TVVYIGVLVGMAIPLTYVKNEDKIKRFGEWLREKYKRCYEIIDEKTIHKI
KSRIPKEKKTE*
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mRNA from alignment at Chr10:20384082..20384992+

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVigStip.JP252948.2.0.Vigst.10G119000.01 ID=drVigStip.JP252948.2.0.Vigst.10G119000.01; Name=Vigst.10G119000.01; organism=Vigna stipulacea; type=mRNA; length=911bp; location=Sequence derived from: Chr10:20384082..20384992+ (Vigna stipulacea
CATTAAAGATCAATCCTTTAAACTCAACTTTGTGGTTTAATTTTGTGGTG
TAGATGTTGACGATGGTGTAGTGAAGGATGTAGTTCTGTGGAGAAGAAAG
AAACTAAATGCAATCGTTATTGTAGTGGCAACAGCAGCATGGGTGTTGAT
GGAAGTATTTCAGTTCAACTTCCTCACTGTCATCTCATGGGTTGCCATAC
TCGTTGTTGCTTCAACATTCCTCTATGCCAATATGCTTAGACTTTTGGGC
AAGTAAGAACCATTCTTTTGCTTTTTCTTCTGATACAAAATTGTCTTCTC
ACATTCTTCTTCATTACTTACACATAGCAACTTGATTATTTTGATGGGGG
TGCAAAATCACTGCACAATCATCAACTAATGGTTACACAACTTGATTATA
TGAACACCTATATACCTAGTACATGTAATAGTTTTTTTCTGTGAAATTTA
GGGAACGACCAAACTTGTTGAGGTTGGAGTTGAGTGAAGAAACAACTAGA
AGAATAGCAAAGGAAGTTCGAGCATGGTTTGAAAAAATAATAAGGTGGTT
GGTCCTTGTGAGTGTAAGGAAAGAGTGGCCAGTATTTGTGGGGGTTGTGG
CTGCATTGTGGTCACTGTCTTATATAGGAAGATGCATGGACCTGCTTACA
GTAGTTTATATAGGTACGTGGTAAAGTTGTTTTGCAATTTTTTCACATTC
GATCGAGCTCTATTTGTTTGTAATTTTGATTTGATGTGCAGGTGTATTAG
TGGGAATGGCAATTCCATTAACTTATGTGAAGAACGAGGACAAGATCAAG
AGATTTGGGGAGTGGTTAAGGGAGAAATACAAGAGATGTTATGAGATTAT
TGATGAGAAGACCATTCATAAGATTAAAAGCAGAATACCAAAGGAGAAGA
AGACAGAGTAA
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Coding sequence (CDS) from alignment at Chr10:20384082..20384992+

>drVigStip.JP252948.2.0.Vigst.10G119000.01 ID=drVigStip.JP252948.2.0.Vigst.10G119000.01; Name=Vigst.10G119000.01; organism=Vigna stipulacea; type=CDS; length=486bp; location=Sequence derived from: Chr10:20384082..20384992+ (Vigna stipulacea
ATGGAAGTATTTCAGTTCAACTTCCTCACTGTCATCTCATGGGTTGCCAT
ACTCGTTGTTGCTTCAACATTCCTCTATGCCAATATGCTTAGACTTTTGG
GCAAGGAACGACCAAACTTGTTGAGGTTGGAGTTGAGTGAAGAAACAACT
AGAAGAATAGCAAAGGAAGTTCGAGCATGGTTTGAAAAAATAATAAGGTG
GTTGGTCCTTGTGAGTGTAAGGAAAGAGTGGCCAGTATTTGTGGGGGTTG
TGGCTGCATTGTGGTCACTGTCTTATATAGGAAGATGCATGGACCTGCTT
ACAGTAGTTTATATAGGTGTATTAGTGGGAATGGCAATTCCATTAACTTA
TGTGAAGAACGAGGACAAGATCAAGAGATTTGGGGAGTGGTTAAGGGAGA
AATACAAGAGATGTTATGAGATTATTGATGAGAAGACCATTCATAAGATT
AAAAGCAGAATACCAAAGGAGAAGAAGACAGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003388Reticulon