Vigan.06G159100.01

Transcript Overview
NameVigan.06G159100.01
Unique NamedrVigAngu.Shumari.1.0.Vigan.06G159100.01
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length882
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr06chromosomeChr06:29224135..29227023 -Vigna angularis cv. Shumari genome v1.a1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vasvvaR600Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvvaR625Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvvaR642Vicia villosa cv. AU Merit genome v1.0Vicia villosa
avjvasL058Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvasL0324Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvasL388Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvasL0657Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvasL527Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvasL1019Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvasL1143Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvasL1194Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvasL1275Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carvasL061Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
pvvasL063Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
carvasL234Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
pvvasL193Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvasL246Pisum sativum Cameor genome v1aPisum sativum
vasvasL216Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvasR293Vigna angularis cv. Shumari genome v1.a1Vigna angularis
carvasL343Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
psvasL517Pisum sativum Cameor genome v1aPisum sativum
carvasL603Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
pvvasL535Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvasL781Pisum sativum Cameor genome v1aPisum sativum
psvasL815Pisum sativum Cameor genome v1aPisum sativum
vasvfhR557Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vasvfhR575Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vasvfhR597Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vasvfhR604Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vasvrvR467Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vasvrvR479Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vasvssR602Vicia sativa cv. Studenica genome v1.0Vicia sativa
vasvssR619Vicia sativa cv. Studenica genome v1.0Vicia sativa
vasvuR473Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vasvssR643Vicia sativa cv. Studenica genome v1.0Vicia sativa
vasvstR495Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuR486Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vasvstR502Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvstR515Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvumR474Vigna umbellata FF25 genome v1.0Vigna umbellata
vasvumR479Vigna umbellata FF25 genome v1.0Vigna umbellata
vasvumR490Vigna umbellata FF25 genome v1.0Vigna umbellata

Orthologs
Gene/TranscriptAssemblySpecies
evm.Ca_v2.0_02254Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Vum_07G00618.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vum_06G01049.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigun11g123300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigst.04G227600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigst.06G145800.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Psat5g259800.1Pisum sativum Cameor genome v1aPisum sativum
rna-TanjilR_01326Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Psat3g030480.1Pisum sativum Cameor genome v1aPisum sativum
rna-XM_022778560.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Phvul.001G193900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Hedin2.R1.3g038800.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigun05g233700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.Ca_v2.0_10457Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Vum_04G02562.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-TanjilR_03149Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.011G097400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigst.07G058200.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Phvul.005G121100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Va08G057870.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Va05G047340.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigan.04G350700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigan.07G077800.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Va03G075900.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigan.06G113800drVigAngu.Shumari.1.0.Vigan.06G113800Vigna angularisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
nbis-exon-88037drVigAngu.Shumari.1.0.nbis-exon-88037Vigna angularisexon
nbis-exon-88038drVigAngu.Shumari.1.0.nbis-exon-88038Vigna angularisexon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
three_prime_utr-18374drVigAngu.Shumari.1.0.three_prime_utr-18374Vigna angularisthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-82486drVigAngu.Shumari.1.0.cds-82486Vigna angularisCDS
cds-82485drVigAngu.Shumari.1.0.cds-82485Vigna angularisCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
five_prime_utr-19319drVigAngu.Shumari.1.0.five_prime_utr-19319Vigna angularisfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVigAngu.Shumari.1.0.Vigan.06G159100.01drVigAngu.Shumari.1.0.Vigan.06G159100.01Vigna angularispolypeptide
drVigAngu.Shumari.1.0.Vigan.06G159100.01drVigAngu.Shumari.1.0.Vigan.06G159100.01-proteinVigna angularispolypeptide


Homology
[Close]
BLAST of Vigan.06G159100.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SC29|A0A0S3SC29_PHAAN (poly(A)-specific ribonuclease OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G159100 PE=3 SV=1)

HSP 1 Score: 609.757 bits (1571), Expect = 0.000e+0
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0 
Query:    1 MGVFSEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTFCFNANSSLTIKQIKVLSKVL 293
            MGVFSEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTFCFNANSSLTIKQIKVLSKVL
Sbjct:    1 MGVFSEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTFCFNANSSLTIKQIKVLSKVL 293
[Close]
BLAST of Vigan.06G159100.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9V632|A0A0L9V632_PHAAN (poly(A)-specific ribonuclease OS=Phaseolus angularis OX=3914 GN=LR48_Vigan08g133200 PE=3 SV=1)

HSP 1 Score: 607.06 bits (1564), Expect = 0.000e+0
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0 
Query:    1 MGVFSEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTFCFNANSSLTIKQIKVLSK 291
            MGVFSEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTFCFNANSSLTIKQIKVLSK
Sbjct:    1 MGVFSEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTFCFNANSSLTIKQIKVLSK 291
[Close]
BLAST of Vigan.06G159100.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0KD91|A0A8T0KD91_PHAAN (poly(A)-specific ribonuclease OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0143660 PE=3 SV=1)

HSP 1 Score: 566.229 bits (1458), Expect = 0.000e+0
Identity = 271/273 (99.27%), Postives = 272/273 (99.63%), Query Frame = 0 
Query:    1 MGVFSEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTF 273
            MGVFSEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAG+ F
Sbjct:    1 MGVFSEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGVLF 273
[Close]
BLAST of Vigan.06G159100.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3VNE5|A0A1S3VNE5_VIGRR (poly(A)-specific ribonuclease OS=Vigna radiata var. radiata OX=3916 GN=LOC106776932 PE=3 SV=2)

HSP 1 Score: 565.074 bits (1455), Expect = 0.000e+0
Identity = 269/278 (96.76%), Postives = 273/278 (98.20%), Query Frame = 0 
Query:    1 MGVFSEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTFCFNAN 278
            MGVF+EDLNPIVIREVWASNIESEF+LIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNH TRRPADHYRLLK+NVDALNLIQVGLTLSDSAGNLPGDA NRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERN TNG+DSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLT C NAN
Sbjct:    1 MGVFTEDLNPIVIREVWASNIESEFQLIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHRTRRPADHYRLLKSNVDALNLIQVGLTLSDSAGNLPGDAENRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNATNGVDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTCCLNAN 278
[Close]
BLAST of Vigan.06G159100.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q0ET64|A0A3Q0ET64_VIGRR (poly(A)-specific ribonuclease OS=Vigna radiata var. radiata OX=3916 GN=LOC106776932 PE=3 SV=1)

HSP 1 Score: 553.132 bits (1424), Expect = 0.000e+0
Identity = 262/269 (97.40%), Postives = 266/269 (98.88%), Query Frame = 0 
Query:    1 MGVFSEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHA 269
            MGVF+EDLNPIVIREVWASNIESEF+LIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNH TRRPADHYRLLK+NVDALNLIQVGLTLSDSAGNLPGDA NRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERN TNG+DSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHA
Sbjct:    1 MGVFTEDLNPIVIREVWASNIESEFQLIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHRTRRPADHYRLLKSNVDALNLIQVGLTLSDSAGNLPGDAENRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNATNGVDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHA 269
[Close]
BLAST of Vigan.06G159100.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q0ERH3|A0A3Q0ERH3_VIGRR (poly(A)-specific ribonuclease OS=Vigna radiata var. radiata OX=3916 GN=LOC106776932 PE=3 SV=1)

HSP 1 Score: 552.747 bits (1423), Expect = 0.000e+0
Identity = 263/272 (96.69%), Postives = 268/272 (98.53%), Query Frame = 0 
Query:    1 MGVFSEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLT 272
            MGVF+EDLNPIVIREVWASNIESEF+LIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNH TRRPADHYRLLK+NVDALNLIQVGLTLSDSAGNLPGDA NRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERN TNG+DSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAG +
Sbjct:    1 MGVFTEDLNPIVIREVWASNIESEFQLIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHRTRRPADHYRLLKSNVDALNLIQVGLTLSDSAGNLPGDAENRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNATNGVDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGTS 272
[Close]
BLAST of Vigan.06G159100.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q0EVV2|A0A3Q0EVV2_VIGRR (poly(A)-specific ribonuclease OS=Vigna radiata var. radiata OX=3916 GN=LOC106776932 PE=3 SV=1)

HSP 1 Score: 552.362 bits (1422), Expect = 0.000e+0
Identity = 262/269 (97.40%), Postives = 266/269 (98.88%), Query Frame = 0 
Query:    1 MGVFSEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHA 269
            MGVF+EDLNPIVIREVWASNIESEF+LIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNH TRRPADHYRLLK+NVDALNLIQVGLTLSDSAGNLPGDA NRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERN TNG+DSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHA
Sbjct:    1 MGVFTEDLNPIVIREVWASNIESEFQLIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHRTRRPADHYRLLKSNVDALNLIQVGLTLSDSAGNLPGDAENRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNATNGVDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHA 269
[Close]
BLAST of Vigan.06G159100.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q0EUZ1|A0A3Q0EUZ1_VIGRR (poly(A)-specific ribonuclease OS=Vigna radiata var. radiata OX=3916 GN=LOC106776932 PE=3 SV=1)

HSP 1 Score: 551.977 bits (1421), Expect = 0.000e+0
Identity = 262/269 (97.40%), Postives = 266/269 (98.88%), Query Frame = 0 
Query:    1 MGVFSEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHA 269
            MGVF+EDLNPIVIREVWASNIESEF+LIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNH TRRPADHYRLLK+NVDALNLIQVGLTLSDSAGNLPGDA NRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERN TNG+DSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHA
Sbjct:    1 MGVFTEDLNPIVIREVWASNIESEFQLIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHRTRRPADHYRLLKSNVDALNLIQVGLTLSDSAGNLPGDAENRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNATNGVDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHA 269
[Close]
BLAST of Vigan.06G159100.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q0ER27|A0A3Q0ER27_VIGRR (poly(A)-specific ribonuclease OS=Vigna radiata var. radiata OX=3916 GN=LOC106776932 PE=3 SV=1)

HSP 1 Score: 551.977 bits (1421), Expect = 0.000e+0
Identity = 262/269 (97.40%), Postives = 266/269 (98.88%), Query Frame = 0 
Query:    1 MGVFSEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHA 269
            MGVF+EDLNPIVIREVWASNIESEF+LIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNH TRRPADHYRLLK+NVDALNLIQVGLTLSDSAGNLPGDA NRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERN TNG+DSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHA
Sbjct:    1 MGVFTEDLNPIVIREVWASNIESEFQLIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHRTRRPADHYRLLKSNVDALNLIQVGLTLSDSAGNLPGDAENRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNATNGVDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHA 269
[Close]
BLAST of Vigan.06G159100.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q0EVV7|A0A3Q0EVV7_VIGRR (poly(A)-specific ribonuclease OS=Vigna radiata var. radiata OX=3916 GN=LOC106776932 PE=3 SV=1)

HSP 1 Score: 549.666 bits (1415), Expect = 0.000e+0
Identity = 262/271 (96.68%), Postives = 267/271 (98.52%), Query Frame = 0 
Query:    1 MGVFSEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGL 271
            MGVF+EDLNPIVIREVWASNIESEF+LIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNH TRRPADHYRLLK+NVDALNLIQVGLTLSDSAGNLPGDA NRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERN TNG+DSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHA +
Sbjct:    1 MGVFTEDLNPIVIREVWASNIESEFQLIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHRTRRPADHYRLLKSNVDALNLIQVGLTLSDSAGNLPGDAENRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNATNGVDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHADI 271
[Close]
BLAST of Vigan.06G159100.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LXM2|CAF1I_ARATH (Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana OX=3702 GN=CAF1-9 PE=2 SV=1)

HSP 1 Score: 383.259 bits (983), Expect = 9.893e-134
Identity = 195/277 (70.40%), Postives = 224/277 (80.87%), Query Frame = 0 
Query:    5 SEDLNP----IVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLP--GDAGNR-FIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCD-TLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTF 273
            + DL P    +V REVWA N+ESEFELI E+ID YPFISMDTEFPGVIF+  +  T P         D Y LLK NVDAL+LIQVGLTLSD  GNLP  GD  +R FIWEFNFRDFDVARDA+APDSI LLRRQGIDFERN  +G++S RFAELMMSSGLVCN+ VSWVTFHSAYDFGYL+KILTR++LP  L EF  V++V FG+ VYDVKHMM+FC+  L+GGLDRVARTL V+RAVGKCHQAGSDSLLTWHAFQ++ DLYFV+D  +KHAG+ +
Sbjct:    7 NRDLKPDGVTVVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRFTNP--------DDLYTLLKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLRRQGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGALGEFKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLTWHAFQRMRDLYFVQDGPEKHAGVLY 275
[Close]
BLAST of Vigan.06G159100.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FMS6|CAF1K_ARATH (Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana OX=3702 GN=CAF1-11 PE=2 SV=1)

HSP 1 Score: 379.022 bits (972), Expect = 3.684e-132
Identity = 184/267 (68.91%), Postives = 218/267 (81.65%), Query Frame = 0 
Query:   11 IVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLP---GDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDT-LYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTF 273
            IVIR+VWA N+ESEF+LIR +++ YPFISMDTEFPGVI++  +D  +  N     P   Y LLK+NVDAL+LIQVGLTLSD+ GNLP   G    R+IWEFNFRDFDV RD +APDSI LLRR GIDFERN   G++S RFAELMMSSGL+CN++VSWVTFHSAYDFGYLVKILTR+ LP  L EFL +++ FFGD VYDVKH+MRFC+  LYGGLDRVAR+L V+RAVGKCHQAGSDSLLTW AFQ++ DLYFV+D  +KHAG+ +
Sbjct:   12 IVIRDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLDVLRRGN-----PNYLYNLLKSNVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELLRRHGIDFERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVALREFLGLLRAFFGDRVYDVKHIMRFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLLTWQAFQRMRDLYFVEDGAEKHAGVLY 273
[Close]
BLAST of Vigan.06G159100.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LEU4|CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 3.280e-95
Identity = 142/275 (51.64%), Postives = 191/275 (69.45%), Query Frame = 0 
Query:    9 NPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRF-IWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTFCFNANSSLT 282
            + I+IREVW  N+  EF LIRE++D++ +I+MDTEFPGV+ +P    T  YN+       +YR LK NVD L LIQVGLT SD  GNLP    ++F IW+FNFR+F++  D YA +SI LLR+ GIDF++N   GID  RF ELMMSSG+V NDA+SWVTFH  YDFGYLVK+LT ++LP +  +F  ++ V+F   VYD+KH+M FC+ L+GGL+R+A  + V+R VG CHQAGSDSLLT  +F+K+ + YF     +K+ G+ +        T
Sbjct:    8 DSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPV--ATFKYNNDL-----NYRTLKENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCGIDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQADFFKLLYVYF-PTVYDIKHLMTFCNGLFGGLNRLAELMGVER-VGICHQAGSDSLLTLGSFRKLKERYF-PGSTEKYTGVLYGLGVEDGTT 272
[Close]
BLAST of Vigan.06G159100.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SKZ2|CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 281.567 bits (719), Expect = 1.016e-93
Identity = 144/275 (52.36%), Postives = 194/275 (70.55%), Query Frame = 0 
Query:    1 MGVFSEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLP--GDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTF 273
            M +F +D + I IREVW  N+ESE  LIRE++D +PF++MDTEFPG++ RP V   K    +      HY  LKTNV+ L +IQ+GLT SD  GNLP  G      IW+FNFR+FD+  D YA DSI LLR+ GIDF +N   GIDS RFAEL+MSSG+V N+ V WVTFHS YDFGYL+K+LT Q+LP     F  ++ V+F   VYD+KH+M+FC++L+GGL+++A  L+V+R VG CHQAGSDSLLT   F+K+ + +F+    +K++G+ +
Sbjct:    1 MSLFLKD-DSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRP-VGTFKTNTEY------HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEMISVYF-PRVYDIKHLMKFCNSLHGGLNKLAELLDVER-VGICHQAGSDSLLTSCTFRKLQENFFIGS-MEKYSGVLY 264
[Close]
BLAST of Vigan.06G159100.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SAI2|CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=CAF1-6 PE=1 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.498e-91
Identity = 138/275 (50.18%), Postives = 197/275 (71.64%), Query Frame = 0 
Query:    1 MGVFSEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPAD-HYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRF-IWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTF 273
            M +F +D + I IREVW  N++ E +LIR+++D +P+++MDTEFPG++ RP            +  AD HY  LKTNV+ L +IQ+GLT S+  GNLP    +++ IW+FNFR+FD+  D +A DSI LL++ GID  +NT +GIDS RFAEL+MSSG+V N+ V WVTFHS YDFGYL+K+LT Q+LP    +F  ++ V+F   VYD+KH+M+FC++L+GGL+++A  L V+R VG CHQAGSDSLLT   F+K+ + +FV   H K++G+ +
Sbjct:    1 MSLFLKD-DSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPV--------GTFKSNADYHYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIELLKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYF-PTVYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCTFRKLKENFFVGPLH-KYSGVLY 263
[Close]
BLAST of Vigan.06G159100.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9S9P2|CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 5.968e-83
Identity = 133/281 (47.33%), Postives = 183/281 (65.12%), Query Frame = 0 
Query:    5 SEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRP-QVDPT-KPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNR-FIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTFCFNANSSLT 282
             E+ + I IREVW  N+E E  LI + ID +P+++MDTEFPG++ +    +P   PY+ H      +Y  LK NV+ L LIQ+GLTLSD  GNLP    N+  IW+FNFR+F+V  D +A DSI LLR+  ID E+N   G+D+ RFAEL+M SG+V ND + WVTFH  YDFGYL+K+L+ ++LP  + +F + ++ FF   VYD+K++M FC  LYGGL+++A  L V R VG  HQAGSDSLLT   F K+ + +F      K++G  F  +    LT
Sbjct:    8 EEEDDTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEY---NYDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELLRKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPEEISDFFDQMEKFF-PVVYDIKYLMGFCTNLYGGLEKIAELLGVKR-VGISHQAGSDSLLTLRTFIKMKEFFFT-GSLLKYSGFLFGLDNPRLLT 282
[Close]
BLAST of Vigan.06G159100.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9D8X5|CNOT8_MOUSE (CCR4-NOT transcription complex subunit 8 OS=Mus musculus OX=10090 GN=Cnot8 PE=1 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 5.729e-72
Identity = 115/252 (45.63%), Postives = 164/252 (65.08%), Query Frame = 0 
Query:    9 NPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYF 260
            N  VI EVWASN+E E   IRE++  Y +I+MDTEFPGV+ RP  +     ++        Y+LL+ NVD L +IQ+GLT ++  G  P        W+FNF+ F++  D Y+ DSI LL   G+ F+++   GID+  FAEL+M+SG+V  D V W++FHS YDFGY+VK+LT   LP    EF +++ +FF  ++YDVK++M+ C  L GGL  VA  L++ R +G+ HQAGSDSLLT  AF ++ +L+F
Sbjct:    8 NSQVICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQ-------YQLLRCNVDLLKIIQLGLTFTNEKGEYPSGINT---WQFNFK-FNLTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILNLFF-PSIYDVKYLMKSCKNLKGGLQEVADQLDLQR-IGRQHQAGSDSLLTGMAFFRMKELFF 246
[Close]
BLAST of Vigan.06G159100.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9UFF9|CNOT8_HUMAN (CCR4-NOT transcription complex subunit 8 OS=Homo sapiens OX=9606 GN=CNOT8 PE=1 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 5.983e-72
Identity = 115/252 (45.63%), Postives = 164/252 (65.08%), Query Frame = 0 
Query:    9 NPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYF 260
            N  VI EVWASN+E E   IRE++  Y +I+MDTEFPGV+ RP  +     ++        Y+LL+ NVD L +IQ+GLT ++  G  P        W+FNF+ F++  D Y+ DSI LL   G+ F+++   GID+  FAEL+M+SG+V  D V W++FHS YDFGY+VK+LT   LP    EF +++ +FF  ++YDVK++M+ C  L GGL  VA  L++ R +G+ HQAGSDSLLT  AF ++ +L+F
Sbjct:    8 NSQVICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQ-------YQLLRCNVDLLKIIQLGLTFTNEKGEYPSGINT---WQFNFK-FNLTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILNLFF-PSIYDVKYLMKSCKNLKGGLQEVADQLDLQR-IGRQHQAGSDSLLTGMAFFRMKELFF 246
[Close]
BLAST of Vigan.06G159100.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9UIV1|CNOT7_HUMAN (CCR4-NOT transcription complex subunit 7 OS=Homo sapiens OX=9606 GN=CNOT7 PE=1 SV=3)

HSP 1 Score: 221.09 bits (562), Expect = 6.347e-70
Identity = 118/272 (43.38%), Postives = 173/272 (63.60%), Query Frame = 0 
Query:   13 IREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADH-YRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEH---QKHAGLTFCFNANSS 280
            I EVWA N++ E + IR++I +Y +++MDTEFPGV+ RP  +         R  AD+ Y+LL+ NVD L +IQ+GLT  +  G  P        W+FNF+ F++  D YA DSI LL   GI F+++   GI++  FAEL+M+SG+V  + V W++FHS YDFGYL+KILT  +LP    +F  ++++FF   +YDVK++M+ C  L GGL  VA  L ++R +G  HQAGSDSLLT  AF K+ +++F  ++H    K+ G  +   + SS
Sbjct:   12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGE--------FRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTST---WQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMREMFF--EDHIDDAKYCGHLYGLGSGSS 267
[Close]
BLAST of Vigan.06G159100.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q5ZJV9|CNOT7_CHICK (CCR4-NOT transcription complex subunit 7 OS=Gallus gallus OX=9031 GN=CNOT7 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.347e-70
Identity = 118/272 (43.38%), Postives = 173/272 (63.60%), Query Frame = 0 
Query:   13 IREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADH-YRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEH---QKHAGLTFCFNANSS 280
            I EVWA N++ E + IR++I +Y +++MDTEFPGV+ RP  +         R  AD+ Y+LL+ NVD L +IQ+GLT  +  G  P        W+FNF+ F++  D YA DSI LL   GI F+++   GI++  FAEL+M+SG+V  + V W++FHS YDFGYL+KILT  +LP    +F  ++++FF   +YDVK++M+ C  L GGL  VA  L ++R +G  HQAGSDSLLT  AF K+ +++F  ++H    K+ G  +   + SS
Sbjct:   12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGE--------FRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTST---WQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMREMFF--EDHIDDAKYCGHLYGLGSGSS 267
[Close]
BLAST of Vigan.06G159100.01 vs. Araport11
Match: | (Symbols: AtCAF1a, CAF1a | CCR4- associated factor 1a | chr3:15952213-15953055 REVERSE LENGTH=280)

HSP 1 Score: 383.259 bits (983), Expect = 1.036e-134
Identity = 195/277 (70.40%), Postives = 224/277 (80.87%), Query Frame = 0 
Query:    5 SEDLNP----IVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLP--GDAGNR-FIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCD-TLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTF 273
            + DL P    +V REVWA N+ESEFELI E+ID YPFISMDTEFPGVIF+  +  T P         D Y LLK NVDAL+LIQVGLTLSD  GNLP  GD  +R FIWEFNFRDFDVARDA+APDSI LLRRQGIDFERN  +G++S RFAELMMSSGLVCN+ VSWVTFHSAYDFGYL+KILTR++LP  L EF  V++V FG+ VYDVKHMM+FC+  L+GGLDRVARTL V+RAVGKCHQAGSDSLLTWHAFQ++ DLYFV+D  +KHAG+ +
Sbjct:    7 NRDLKPDGVTVVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRFTNP--------DDLYTLLKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLRRQGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGALGEFKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLTWHAFQRMRDLYFVQDGPEKHAGVLY 275
[Close]
BLAST of Vigan.06G159100.01 vs. Araport11
Match: | (Symbols: AtCAF1b, CAF1b | CCR4- associated factor 1b | chr5:7365605-7366441 REVERSE LENGTH=278)

HSP 1 Score: 379.022 bits (972), Expect = 3.857e-133
Identity = 184/267 (68.91%), Postives = 218/267 (81.65%), Query Frame = 0 
Query:   11 IVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLP---GDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDT-LYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTF 273
            IVIR+VWA N+ESEF+LIR +++ YPFISMDTEFPGVI++  +D  +  N     P   Y LLK+NVDAL+LIQVGLTLSD+ GNLP   G    R+IWEFNFRDFDV RD +APDSI LLRR GIDFERN   G++S RFAELMMSSGL+CN++VSWVTFHSAYDFGYLVKILTR+ LP  L EFL +++ FFGD VYDVKH+MRFC+  LYGGLDRVAR+L V+RAVGKCHQAGSDSLLTW AFQ++ DLYFV+D  +KHAG+ +
Sbjct:   12 IVIRDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLDVLRRGN-----PNYLYNLLKSNVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELLRRHGIDFERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVALREFLGLLRAFFGDRVYDVKHIMRFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLLTWQAFQRMRDLYFVEDGAEKHAGVLY 273
[Close]
BLAST of Vigan.06G159100.01 vs. Araport11
Match: | (Symbols: CAF1i | CCR4-associated factor 1i | chr5:3464581-3465414 FORWARD LENGTH=277)

HSP 1 Score: 285.419 bits (729), Expect = 3.427e-96
Identity = 142/275 (51.64%), Postives = 191/275 (69.45%), Query Frame = 0 
Query:    9 NPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRF-IWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTFCFNANSSLT 282
            + I+IREVW  N+  EF LIRE++D++ +I+MDTEFPGV+ +P    T  YN+       +YR LK NVD L LIQVGLT SD  GNLP    ++F IW+FNFR+F++  D YA +SI LLR+ GIDF++N   GID  RF ELMMSSG+V NDA+SWVTFH  YDFGYLVK+LT ++LP +  +F  ++ V+F   VYD+KH+M FC+ L+GGL+R+A  + V+R VG CHQAGSDSLLT  +F+K+ + YF     +K+ G+ +        T
Sbjct:    8 DSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPV--ATFKYNNDL-----NYRTLKENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCGIDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQADFFKLLYVYF-PTVYDIKHLMTFCNGLFGGLNRLAELMGVER-VGICHQAGSDSLLTLGSFRKLKERYF-PGSTEKYTGVLYGLGVEDGTT 272
[Close]
BLAST of Vigan.06G159100.01 vs. Araport11
Match: | (Symbols: CAF1k | CCR4-associated factor 1k | chr2:13640829-13641656 REVERSE LENGTH=275)

HSP 1 Score: 281.567 bits (719), Expect = 1.062e-94
Identity = 144/275 (52.36%), Postives = 194/275 (70.55%), Query Frame = 0 
Query:    1 MGVFSEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLP--GDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTF 273
            M +F +D + I IREVW  N+ESE  LIRE++D +PF++MDTEFPG++ RP V   K    +      HY  LKTNV+ L +IQ+GLT SD  GNLP  G      IW+FNFR+FD+  D YA DSI LLR+ GIDF +N   GIDS RFAEL+MSSG+V N+ V WVTFHS YDFGYL+K+LT Q+LP     F  ++ V+F   VYD+KH+M+FC++L+GGL+++A  L+V+R VG CHQAGSDSLLT   F+K+ + +F+    +K++G+ +
Sbjct:    1 MSLFLKD-DSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRP-VGTFKTNTEY------HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEMISVYF-PRVYDIKHLMKFCNSLHGGLNKLAELLDVER-VGICHQAGSDSLLTSCTFRKLQENFFIGS-MEKYSGVLY 264
[Close]
BLAST of Vigan.06G159100.01 vs. Araport11
Match: | (Symbols: CAF1j | CCR4-associated factor 1j | chr1:30358517-30359341 FORWARD LENGTH=274)

HSP 1 Score: 275.404 bits (703), Expect = 2.609e-92
Identity = 138/275 (50.18%), Postives = 197/275 (71.64%), Query Frame = 0 
Query:    1 MGVFSEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPAD-HYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRF-IWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTF 273
            M +F +D + I IREVW  N++ E +LIR+++D +P+++MDTEFPG++ RP            +  AD HY  LKTNV+ L +IQ+GLT S+  GNLP    +++ IW+FNFR+FD+  D +A DSI LL++ GID  +NT +GIDS RFAEL+MSSG+V N+ V WVTFHS YDFGYL+K+LT Q+LP    +F  ++ V+F   VYD+KH+M+FC++L+GGL+++A  L V+R VG CHQAGSDSLLT   F+K+ + +FV   H K++G+ +
Sbjct:    1 MSLFLKD-DSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPV--------GTFKSNADYHYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIELLKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYF-PTVYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCTFRKLKENFFVGPLH-KYSGVLY 263
[Close]
BLAST of Vigan.06G159100.01 vs. Araport11
Match: | (Symbols: CAF1j | CCR4-associated factor 1j | chr1:30358517-30359341 FORWARD LENGTH=274)

HSP 1 Score: 275.404 bits (703), Expect = 2.609e-92
Identity = 138/275 (50.18%), Postives = 197/275 (71.64%), Query Frame = 0 
Query:    1 MGVFSEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPAD-HYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRF-IWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTF 273
            M +F +D + I IREVW  N++ E +LIR+++D +P+++MDTEFPG++ RP            +  AD HY  LKTNV+ L +IQ+GLT S+  GNLP    +++ IW+FNFR+FD+  D +A DSI LL++ GID  +NT +GIDS RFAEL+MSSG+V N+ V WVTFHS YDFGYL+K+LT Q+LP    +F  ++ V+F   VYD+KH+M+FC++L+GGL+++A  L V+R VG CHQAGSDSLLT   F+K+ + +FV   H K++G+ +
Sbjct:    1 MSLFLKD-DSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPV--------GTFKSNADYHYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIELLKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYF-PTVYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCTFRKLKENFFVGPLH-KYSGVLY 263
[Close]
BLAST of Vigan.06G159100.01 vs. Araport11
Match: | (Symbols: CAF1j | CCR4-associated factor 1j | chr1:30358517-30359583 FORWARD LENGTH=286)

HSP 1 Score: 275.018 bits (702), Expect = 4.504e-92
Identity = 139/288 (48.26%), Postives = 200/288 (69.44%), Query Frame = 0 
Query:    1 MGVFSEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPAD-HYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRF-IWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTFCFNANSSLTIKQI 286
            M +F +D + I IREVW  N++ E +LIR+++D +P+++MDTEFPG++ RP            +  AD HY  LKTNV+ L +IQ+GLT S+  GNLP    +++ IW+FNFR+FD+  D +A DSI LL++ GID  +NT +GIDS RFAEL+MSSG+V N+ V WVTFHS YDFGYL+K+LT Q+LP    +F  ++ V+F   VYD+KH+M+FC++L+GGL+++A  L V+R VG CHQAGSDSLLT   F+K+ + +FV   H K++G+ +     +    K +
Sbjct:    1 MSLFLKD-DSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPV--------GTFKSNADYHYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIELLKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYF-PTVYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCTFRKLKENFFVGPLH-KYSGVLYGLGVENEANGKNV 276
[Close]
BLAST of Vigan.06G159100.01 vs. Araport11
Match: | (Symbols: CAF1h | CCR4-associated factor 1h | chr1:5469962-5470822 FORWARD LENGTH=286)

HSP 1 Score: 254.603 bits (649), Expect = 6.227e-84
Identity = 133/281 (47.33%), Postives = 183/281 (65.12%), Query Frame = 0 
Query:    5 SEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRP-QVDPT-KPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNR-FIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTFCFNANSSLT 282
             E+ + I IREVW  N+E E  LI + ID +P+++MDTEFPG++ +    +P   PY+ H      +Y  LK NV+ L LIQ+GLTLSD  GNLP    N+  IW+FNFR+F+V  D +A DSI LLR+  ID E+N   G+D+ RFAEL+M SG+V ND + WVTFH  YDFGYL+K+L+ ++LP  + +F + ++ FF   VYD+K++M FC  LYGGL+++A  L V R VG  HQAGSDSLLT   F K+ + +F      K++G  F  +    LT
Sbjct:    8 EEEDDTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEY---NYDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELLRKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPEEISDFFDQMEKFF-PVVYDIKYLMGFCTNLYGGLEKIAELLGVKR-VGISHQAGSDSLLTLRTFIKMKEFFFT-GSLLKYSGFLFGLDNPRLLT 282
[Close]
BLAST of Vigan.06G159100.01 vs. Araport11
Match: | (Symbols: CAF1h | CCR4-associated factor 1h | chr1:5469962-5470822 FORWARD LENGTH=286)

HSP 1 Score: 254.603 bits (649), Expect = 6.227e-84
Identity = 133/281 (47.33%), Postives = 183/281 (65.12%), Query Frame = 0 
Query:    5 SEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRP-QVDPT-KPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNR-FIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLYFVKDEHQKHAGLTFCFNANSSLT 282
             E+ + I IREVW  N+E E  LI + ID +P+++MDTEFPG++ +    +P   PY+ H      +Y  LK NV+ L LIQ+GLTLSD  GNLP    N+  IW+FNFR+F+V  D +A DSI LLR+  ID E+N   G+D+ RFAEL+M SG+V ND + WVTFH  YDFGYL+K+L+ ++LP  + +F + ++ FF   VYD+K++M FC  LYGGL+++A  L V R VG  HQAGSDSLLT   F K+ + +F      K++G  F  +    LT
Sbjct:    8 EEEDDTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEY---NYDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELLRKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPEEISDFFDQMEKFF-PVVYDIKYLMGFCTNLYGGLEKIAELLGVKR-VGISHQAGSDSLLTLRTFIKMKEFFFT-GSLLKYSGFLFGLDNPRLLT 282
[Close]
BLAST of Vigan.06G159100.01 vs. Araport11
Match: | (Symbols: CAF1g | CCR4-associated factor 1g | chr1:1965924-1967006 FORWARD LENGTH=360)

HSP 1 Score: 150.599 bits (379), Expect = 1.135e-42
Identity = 96/259 (37.07%), Postives = 135/259 (52.12%), Query Frame = 0 
Query:    7 DLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFRPQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDAGNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDS---TRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLN-VVKVFFGDNVYDVKHMMRFCDTL--YGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDLY 259
            +++  + R VW SN++ E   + E + R+P I+ DTE+PG+IFR   D +           + YR +K NV+   LIQ G TL ++ G + G      +WE NF +F    D     SI  LRR G+D ++    G+D      F +LM  +       V +VTF  AYDF Y + IL    LP    EF   VVKVF    VYD K M  FC+ L  + GL ++A+ L + R VG+ H AGSDSL+T   F K+  +Y
Sbjct:    3 EIHQPLARRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTYFDSSS---------DECYRAMKGNVENTKLIQCGFTLFNAKGEIGG------VWEINFSNFGDPSDTRNELSIEFLRRHGLDLQKIRDEGVDMFGYGFFPKLM--TVFRSQKHVEFVTFQGAYDFAYFLSILNHGKLPETHGEFATEVVKVF--GQVYDTKVMAGFCEGLGEHLGLSKLAQLLQITR-VGRAHHAGSDSLMTALVFIKLKHVY 241
The following BLAST results are available for this feature:
BLAST of Vigan.06G159100.01 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-13 (Blastp of Vigna angularis cv. Shumari v1.a1 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0S3SC29|A0A0S3SC29_PHAAN0.000e+0100.00poly(A)-specific ribonuclease OS=Vigna angularis v... [more]
tr|A0A0L9V632|A0A0L9V632_PHAAN0.000e+0100.00poly(A)-specific ribonuclease OS=Phaseolus angular... [more]
tr|A0A8T0KD91|A0A8T0KD91_PHAAN0.000e+099.27poly(A)-specific ribonuclease OS=Phaseolus angular... [more]
tr|A0A1S3VNE5|A0A1S3VNE5_VIGRR0.000e+096.76poly(A)-specific ribonuclease OS=Vigna radiata var... [more]
tr|A0A3Q0ET64|A0A3Q0ET64_VIGRR0.000e+097.40poly(A)-specific ribonuclease OS=Vigna radiata var... [more]
tr|A0A3Q0ERH3|A0A3Q0ERH3_VIGRR0.000e+096.69poly(A)-specific ribonuclease OS=Vigna radiata var... [more]
tr|A0A3Q0EVV2|A0A3Q0EVV2_VIGRR0.000e+097.40poly(A)-specific ribonuclease OS=Vigna radiata var... [more]
tr|A0A3Q0EUZ1|A0A3Q0EUZ1_VIGRR0.000e+097.40poly(A)-specific ribonuclease OS=Vigna radiata var... [more]
tr|A0A3Q0ER27|A0A3Q0ER27_VIGRR0.000e+097.40poly(A)-specific ribonuclease OS=Vigna radiata var... [more]
tr|A0A3Q0EVV7|A0A3Q0EVV7_VIGRR0.000e+096.68poly(A)-specific ribonuclease OS=Vigna radiata var... [more]
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BLAST of Vigan.06G159100.01 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-13 (Blastp of Vigna angularis cv. Shumari v1.a1 proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q9LXM2|CAF1I_ARATH9.893e-13470.40Probable CCR4-associated factor 1 homolog 9 OS=Ara... [more]
sp|Q9FMS6|CAF1K_ARATH3.684e-13268.91Probable CCR4-associated factor 1 homolog 11 OS=Ar... [more]
sp|Q9LEU4|CAF1J_ARATH3.280e-9551.64Probable CCR4-associated factor 1 homolog 10 OS=Ar... [more]
sp|Q9SKZ2|CAF1G_ARATH1.016e-9352.36Probable CCR4-associated factor 1 homolog 7 OS=Ara... [more]
sp|Q9SAI2|CAF1F_ARATH2.498e-9150.18Probable CCR4-associated factor 1 homolog 6 OS=Ara... [more]
sp|Q9S9P2|CAF1B_ARATH5.968e-8347.33Probable CCR4-associated factor 1 homolog 2 OS=Ara... [more]
sp|Q9D8X5|CNOT8_MOUSE5.729e-7245.63CCR4-NOT transcription complex subunit 8 OS=Mus mu... [more]
sp|Q9UFF9|CNOT8_HUMAN5.983e-7245.63CCR4-NOT transcription complex subunit 8 OS=Homo s... [more]
sp|Q9UIV1|CNOT7_HUMAN6.347e-7043.38CCR4-NOT transcription complex subunit 7 OS=Homo s... [more]
sp|Q5ZJV9|CNOT7_CHICK6.347e-7043.38CCR4-NOT transcription complex subunit 7 OS=Gallus... [more]
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BLAST of Vigan.06G159100.01 vs. Araport11
Analysis Date: 2024-08-13 (Blastp of Vigna angularis cv. Shumari v1.a1 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
|1.036e-13470.40Symbols: AtCAF1a, CAF1a | CCR4- associated factor ... [more]
|3.857e-13368.91Symbols: AtCAF1b, CAF1b | CCR4- associated factor ... [more]
|3.427e-9651.64Symbols: CAF1i | CCR4-associated factor 1i | chr5:... [more]
|1.062e-9452.36Symbols: CAF1k | CCR4-associated factor 1k | chr2:... [more]
|2.609e-9250.18Symbols: CAF1j | CCR4-associated factor 1j | chr1:... [more]
|2.609e-9250.18Symbols: CAF1j | CCR4-associated factor 1j | chr1:... [more]
|4.504e-9248.26Symbols: CAF1j | CCR4-associated factor 1j | chr1:... [more]
|6.227e-8447.33Symbols: CAF1h | CCR4-associated factor 1h | chr1:... [more]
|6.227e-8447.33Symbols: CAF1h | CCR4-associated factor 1h | chr1:... [more]
|1.135e-4237.07Symbols: CAF1g | CCR4-associated factor 1g | chr1:... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna angularis cv. Shumari genome v1.a1
Date Performed: 2024-08-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:3.30.420.10:FF:000027coord: 4..279
e-value: 5.2E-127
score: 424.5
IPR006941Ribonuclease CAF1PFAMPF04857CAF1coord: 16..144
e-value: 3.9E-9
score: 47.8
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 2..278
e-value: 4.0E-93
score: 313.4
IPR039637CCR4-NOT transcription complex subunit 7/8/Pop2PANTHERPTHR10797CCR4-NOT TRANSCRIPTION COMPLEX SUBUNITcoord: 12..275
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 12..263

Sequences
The following sequences are available for this feature:

mRNA sequence

>drVigAngu.Shumari.1.0.Vigan.06G159100.01 ID=drVigAngu.Shumari.1.0.Vigan.06G159100.01; Name=Vigan.06G159100.01; organism=Vigna angularis; type=mRNA; length=882bp
ATGGGTGTGTTCAGTGAAGACCTCAATCCAATTGTGATACGTGAAGTATG
GGCATCGAATATAGAATCTGAATTCGAACTCATCCGAGAGTTAATTGATC
GCTACCCTTTTATCTCCATGGACACTGAGTTTCCTGGAGTGATTTTCCGG
CCGCAGGTTGATCCTACCAAACCCTACAACCACCACACTCGCCGCCCTGC
CGACCACTACCGTCTCCTCAAGACCAACGTTGACGCGCTCAACCTCATCC
AGGTCGGCCTTACACTGTCTGACTCAGCCGGCAACCTCCCTGGCGATGCC
GGAAATCGCTTCATCTGGGAGTTTAATTTCCGCGACTTTGACGTGGCGCG
TGATGCTTACGCGCCGGACTCCATCGCACTTCTCCGCCGCCAGGGGATCG
ACTTCGAGCGCAACACCACCAACGGTATTGACTCAACTCGCTTCGCGGAG
CTGATGATGTCTTCAGGACTCGTGTGCAACGACGCCGTGAGCTGGGTCAC
CTTCCACAGCGCTTACGATTTCGGGTATTTGGTTAAGATCCTTACCCGAC
AGGATTTACCGACCCGGTTGGAGGAATTTTTAAACGTTGTGAAAGTGTTC
TTTGGAGACAACGTTTACGATGTGAAGCACATGATGAGGTTCTGTGATAC
ACTCTACGGTGGTTTGGATCGGGTTGCTCGGACGCTTAACGTGGACCGCG
CCGTAGGGAAGTGCCACCAGGCTGGGTCAGACAGCTTACTGACCTGGCAC
GCGTTCCAGAAGATTGTGGATCTTTATTTTGTTAAGGATGAACACCAAAA
ACATGCTGGTCTAACTTTCTGCTTTAATGCAAATTCAAGCTTGACTATTA
AGCAAATTAAAGTGTTAAGCAAGGTATTGTAA
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protein sequence of drVigAngu.Shumari.1.0.Vigan.06G159100.01

>drVigAngu.Shumari.1.0.Vigan.06G159100.01 ID=drVigAngu.Shumari.1.0.Vigan.06G159100.01; Name=drVigAngu.Shumari.1.0.Vigan.06G159100.01; organism=Vigna angularis; type=polypeptide; length=294bp
MGVFSEDLNPIVIREVWASNIESEFELIRELIDRYPFISMDTEFPGVIFR
PQVDPTKPYNHHTRRPADHYRLLKTNVDALNLIQVGLTLSDSAGNLPGDA
GNRFIWEFNFRDFDVARDAYAPDSIALLRRQGIDFERNTTNGIDSTRFAE
LMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRQDLPTRLEEFLNVVKVF
FGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWH
AFQKIVDLYFVKDEHQKHAGLTFCFNANSSLTIKQIKVLSKVL*
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mRNA from alignment at Chr06:29224135..29227023-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVigAngu.Shumari.1.0.Vigan.06G159100.01 ID=drVigAngu.Shumari.1.0.Vigan.06G159100.01; Name=Vigan.06G159100.01; organism=Vigna angularis; type=mRNA; length=2889bp; location=Sequence derived from: Chr06:29224135..29227023- (Vigna angularis
TGCTGAAATTTGGGTTTAGATGATGATGACTTTTAGCTGTAATCCAAACA
GGAGATGGAAGAAAATAATAATGAAAAGAGGTGCCTAATCTGACTGAGTC
TGGCATTGACTAAGCATCGGTTACCTTGTTCAGTCAAGGTTTCTCACGCG
TTGAACCTTGACGCTTTTCCGCCACATTCACGCATTCTTACACTCAACTT
ACACACACTTTTCTTTCTTTAATCCAAAAACCACTTTCCACGCAACATCT
TCACACCCTTCTCCCTTCTTCATATAAAACCTCACTCTTCACACACCCTT
TTCCAAACCCATCAACCATAACAAAATTCAAAATCAACTTCCAAAGCTAG
TCAGTCTCAAAGTTTAAATCTTGAAATATGGGTGTGTTCAGTGAAGACCT
CAATCCAATTGTGATACGTGAAGTATGGGCATCGAATATAGAATCTGAAT
TCGAACTCATCCGAGAGTTAATTGATCGCTACCCTTTTATCTCCATGGAC
ACTGAGTTTCCTGGAGTGATTTTCCGGCCGCAGGTTGATCCTACCAAACC
CTACAACCACCACACTCGCCGCCCTGCCGACCACTACCGTCTCCTCAAGA
CCAACGTTGACGCGCTCAACCTCATCCAGGTCGGCCTTACACTGTCTGAC
TCAGCCGGCAACCTCCCTGGCGATGCCGGAAATCGCTTCATCTGGGAGTT
TAATTTCCGCGACTTTGACGTGGCGCGTGATGCTTACGCGCCGGACTCCA
TCGCACTTCTCCGCCGCCAGGGGATCGACTTCGAGCGCAACACCACCAAC
GGTATTGACTCAACTCGCTTCGCGGAGCTGATGATGTCTTCAGGACTCGT
GTGCAACGACGCCGTGAGCTGGGTCACCTTCCACAGCGCTTACGATTTCG
GGTATTTGGTTAAGATCCTTACCCGACAGGATTTACCGACCCGGTTGGAG
GAATTTTTAAACGTTGTGAAAGTGTTCTTTGGAGACAACGTTTACGATGT
GAAGCACATGATGAGGTTCTGTGATACACTCTACGGTGGTTTGGATCGGG
TTGCTCGGACGCTTAACGTGGACCGCGCCGTAGGGAAGTGCCACCAGGCT
GGGTCAGACAGCTTACTGACCTGGCACGCGTTCCAGAAGATTGTGGATCT
TTATTTTGTTAAGGATGAACACCAAAAACATGCTGGTGTGTTGTTTGGAT
TAGAAGTTCTGTGTTAATTAAAAATTTATTATAAACATAAATAATAAAAA
TTCAATTGATTGATTATTTATTGGTTTTTTGTTGTTGTTGAAGGTCTAAC
TTTCTGCTTTAATGCAAATTCAAGCTTGACTATTAAGCAAATTAAAGTGT
TAAGCAAGGTATTGTAAATGGCATAATGGCATGTGGGAAGTTGTCAATCA
ATGAAAACTTCACAATGAAGTAAATTACAGTGTTACGCAAAGTGGTGAAT
ACTATTATTCTTTAAGGGGTTGATTTTCATTTATCAGCATGATCATGTGC
AGGAACTAGCATTGTGATTGAAAATGAGTTTATGTTCAACTTTTTAGGAT
GTTTCAGAACATAAACTGAAGAAAACTCTGCAGCTGCTAATGGAAATTGT
TTTTACTTGTTTCATTGGTTTCAGCCTACTGTTGGCTATTGCCAGAGATA
TATTTTTGAGTTGGTGTTGCTTAGTAGAGTTAACAGAATCCAAGGGTTCC
TGCGGCTGTAAGTAGATTGTGCTGAATTTGTGGATTGTGCTTATGTTTGT
TTATACGTTCTTACATTTTTAATGCAATTCTTCTCATTACTTTGATAGAT
GTAAACAGTTAAATATTCTGAATGTAGAATGATAGTGGTAAACTCCATTC
ATTTTACAGAAACTCTTGGTTAAAGTTCTTGCAAACAAATTCTACCAGCA
TGCCATTTTTCAGACTCATCATAATATGTTTTTAAAGTAGTATGTTGGTT
GTTCAAACTGGTATGACATTTAGCTATTGGTTAAGTTAAATTAGATTAAA
AGTTTATTATTTGTCGCTATTTTCAAGATATGTTATGTGTATGGATTGTT
TTCTTCACACCTGCAGCTTTCTAATAGTGTATTTCATTATCCCCTTATTT
CAAATGGTTGTGGCACTGAGCAAAATATACTTGTGATTGTTGTATGATCT
TAAGGAAATCTATGTTTATGAGTCAAAGAATCTGCTGATTGCAGGAGCGG
ACTCTGAAGTTACTTTTAAGGTTTCTTTAAAGAATTCCTAGTTTCATGGA
CTCAGATACGAGACAAGTTGGCATAATATGCATATGTTTTTGTTTAATGC
TTGCGTTGTTTGACCACTTACTTCCTTGAACTTTGCAACTTGTAACTTAG
GTTTATTTTTAATTGGATTTTATTTTCTAAATTTAGTACTATCAGTTTAG
CTTCCTTTTCTGATACCACATAATGGTTTCTTGGATCTTCTCTCCGATGA
TTTGGCTGCAGATATTTGTTGCAGATGTTCGAAAAATTAGTCACTGATTA
GTCTGGTTTCCAGTGTCATTCTGAAGACATTTTCTCTTTAATTGTGTTGT
TGGATTAAAGAAGTAAAAGATATGCTTAAGGAATGGTGCGAAAAGGTATT
GTTCTTCCATTTTTTGATGCTTATATTTGTTGTTCATGACAGGGGAAATG
AATCATAGTTTCTATTCAGACCATCATGAGTTTGTGGTCAAATTGGTTAG
GTGTATGTATTTTTTTGCCCTGTTTCACACCAATACGTTGAAACTTTGTG
TCCTCTCTTGTTCTCGTGTATTTTCACATACAAAGTTTGACAATTTGGCT
ACAAGATTCAATCAAGTTTTTCCAAAATCATTTTATTTAGCACTTTGAAA
AGGAATGTATTCGAGATAGAAAAAGTTGTGCCTTGGAAG
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Coding sequence (CDS) from alignment at Chr06:29224135..29227023-

>drVigAngu.Shumari.1.0.Vigan.06G159100.01 ID=drVigAngu.Shumari.1.0.Vigan.06G159100.01; Name=Vigan.06G159100.01; organism=Vigna angularis; type=CDS; length=882bp; location=Sequence derived from: Chr06:29224135..29227023- (Vigna angularis
ATGGGTGTGTTCAGTGAAGACCTCAATCCAATTGTGATACGTGAAGTATG
GGCATCGAATATAGAATCTGAATTCGAACTCATCCGAGAGTTAATTGATC
GCTACCCTTTTATCTCCATGGACACTGAGTTTCCTGGAGTGATTTTCCGG
CCGCAGGTTGATCCTACCAAACCCTACAACCACCACACTCGCCGCCCTGC
CGACCACTACCGTCTCCTCAAGACCAACGTTGACGCGCTCAACCTCATCC
AGGTCGGCCTTACACTGTCTGACTCAGCCGGCAACCTCCCTGGCGATGCC
GGAAATCGCTTCATCTGGGAGTTTAATTTCCGCGACTTTGACGTGGCGCG
TGATGCTTACGCGCCGGACTCCATCGCACTTCTCCGCCGCCAGGGGATCG
ACTTCGAGCGCAACACCACCAACGGTATTGACTCAACTCGCTTCGCGGAG
CTGATGATGTCTTCAGGACTCGTGTGCAACGACGCCGTGAGCTGGGTCAC
CTTCCACAGCGCTTACGATTTCGGGTATTTGGTTAAGATCCTTACCCGAC
AGGATTTACCGACCCGGTTGGAGGAATTTTTAAACGTTGTGAAAGTGTTC
TTTGGAGACAACGTTTACGATGTGAAGCACATGATGAGGTTCTGTGATAC
ACTCTACGGTGGTTTGGATCGGGTTGCTCGGACGCTTAACGTGGACCGCG
CCGTAGGGAAGTGCCACCAGGCTGGGTCAGACAGCTTACTGACCTGGCAC
GCGTTCCAGAAGATTGTGGATCTTTATTTTGTTAAGGATGAACACCAAAA
ACATGCTGGTCTAACTTTCTGCTTTAATGCAAATTCAAGCTTGACTATTA
AGCAAATTAAAGTGTTAAGCAAGGTATTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR006941RNase_CAF1
IPR036397RNaseH_sf
IPR039637CNOT7/CNOT8/Pop2
IPR012337RNaseH-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0004535poly(A)-specific ribonuclease activity
Vocabulary: Cellular Component
TermDefinition
GO:0030014CCR4-NOT complex