PvulFLAVERTChr01.69

Transcript Overview


Name	PvulFLAVERTChr01.69
Unique Name	drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.69
Type	mRNA
Organism	Phaseolus vulgaris (Common bean)
Sequence length	872

References

External references for this mRNA


Database	Accession
PMID	2471147
PMID	3606121

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr01	chromosome	Chr01:1232533..1234052 +	Phaseolus vulgaris cv. Flavert genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Phaseolus vulgaris cv. Flavert genome v1.0	2024-07-01
Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL	2024-08-19
Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot	2024-08-19
Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11	2024-08-19
InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0	2024-08-19

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
anpvfL0097	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjpvfL052	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anpvfL0307	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anpvfL0365	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anpvfL0421	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anpvfL0529	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anpvfL0598	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjpvfL557	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anpvfL0859	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anpvfL0874	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anpvfL1041	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjpvfL773	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
carpvfL300	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
carpvfL420	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
pspvfL416	Pisum sativum Cameor genome v1a	Pisum sativum
pspvfL606	Pisum sativum Cameor genome v1a	Pisum sativum
ccapvfL518	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccapvfL578	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccapvfL658	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
pvfpvfR063	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
pvfvfhR021	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
pvfvfhR046	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
pvfvrvR030	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
pvfvrvR034	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
pvfvssR033	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
pvfvssR037	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
pvpvfL002	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
pvfvuR056	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
pvfvuR065	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
pvpvfL685	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris

Orthologs


Gene/Transcript	Assembly	Species
Va07G070600.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
Psat6g004680.1	Pisum sativum Cameor genome v1a	Pisum sativum
Vigun08g010000.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
rna-TanjilR_18042	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
rna-XM_014649089.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
rna-TanjilR_09742	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Vfaba.Hedin2.R1.3g235480.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
Cc_v2.0_10959.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
rna-TanjilR_12359	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
evm.Ca_v2.0_11968	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
rna-TanjilR_17058	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
jg35113.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Phvul.001G009100.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
PvulFLAVERTChr01.69	drPhaVulg.Flavert.1.0gene:PvulFLAVERTChr01.69	Phaseolus vulgaris	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr01.69.0	drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr01.69.0	Phaseolus vulgaris	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr01.69.1	drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr01.69.1	Phaseolus vulgaris	exon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr01.69.2	drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr01.69.2	Phaseolus vulgaris	exon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr01.69.3	drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr01.69.3	Phaseolus vulgaris	exon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr01.69.4	drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr01.69.4	Phaseolus vulgaris	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr01.69.1	drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr01.69.1	Phaseolus vulgaris	CDS
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr01.69.2	drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr01.69.2	Phaseolus vulgaris	CDS
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr01.69.3	drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr01.69.3	Phaseolus vulgaris	CDS
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr01.69.4	drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr01.69.4	Phaseolus vulgaris	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr01.69.8	drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr01.69.8	Phaseolus vulgaris	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.69	drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.69	Phaseolus vulgaris	polypeptide
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.69	drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.69-protein	Phaseolus vulgaris	polypeptide

Homology

[Close]

BLAST of PvulFLAVERTChr01.69 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9Q1R5T3|A0A9Q1R5T3_9SOLA (Histone H3.3 OS=Anisodus acutangulus OX=402998 GN=K7X08_016849 PE=3 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 1.038e-93
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   19 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 154

[Close]

BLAST of PvulFLAVERTChr01.69 vs. ExPASy TrEMBL (2024)
Match: tr|A0A453QJ99|A0A453QJ99_AEGTS (Histone H2A/H2B/H3 domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.827e-93
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   32 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 167

[Close]

BLAST of PvulFLAVERTChr01.69 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8S9HTH7|A0A8S9HTH7_BRACR (Histone H3.3 OS=Brassica cretica OX=69181 GN=F2Q70_00016133 PE=3 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.838e-93
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   28 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 163

[Close]

BLAST of PvulFLAVERTChr01.69 vs. ExPASy TrEMBL (2024)
Match: tr|A0A835I999|A0A835I999_9MAGN (Histone H2A/H2B/H3 domain-containing protein OS=Coptis chinensis OX=261450 GN=IFM89_037991 PE=3 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.897e-93
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:  118 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 253

[Close]

BLAST of PvulFLAVERTChr01.69 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9Q1R5J9|A0A9Q1R5J9_9SOLA (Histone H3.3 OS=Anisodus acutangulus OX=402998 GN=K7X08_001753 PE=3 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 2.078e-93
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   55 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 190

[Close]

BLAST of PvulFLAVERTChr01.69 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0D3AQT1|A0A0D3AQT1_BRAOL (Histone H3.3 OS=Brassica oleracea var. oleracea OX=109376 PE=3 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 2.312e-93
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   36 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 171

[Close]

BLAST of PvulFLAVERTChr01.69 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6D2IDN5|A0A6D2IDN5_9BRAS (Histone H3.3 OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS10379 PE=3 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 2.356e-93
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   25 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 160

[Close]

BLAST of PvulFLAVERTChr01.69 vs. ExPASy TrEMBL (2024)
Match: tr|A0A453ST68|A0A453ST68_AEGTS (Histone H2A/H2B/H3 domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 2.513e-93
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   24 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 159

[Close]

BLAST of PvulFLAVERTChr01.69 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6D2HXN6|A0A6D2HXN6_9BRAS (Histone H3.3 OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS23213 PE=3 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 3.152e-93
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   38 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 173

[Close]

BLAST of PvulFLAVERTChr01.69 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K1J132|A0A2K1J132_PHYPA (Histone H3 OS=Physcomitrium patens OX=3218 GN=PHYPA_023132 PE=3 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 3.281e-93
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    8 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 143

[Close]

BLAST of PvulFLAVERTChr01.69 vs. ExPASy Swiss-Prot (2024)
Match: sp|P80553|H3_NARPS (Histone H3 OS=Narcissus pseudonarcissus OX=39639 PE=1 SV=3)

HSP 1 Score: 274.248 bits (700), Expect = 1.379e-95
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of PvulFLAVERTChr01.69 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q71H73|H33_VITVI (Histone H3.3 OS=Vitis vinifera OX=29760 PE=2 SV=3)

HSP 1 Score: 274.248 bits (700), Expect = 1.379e-95
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of PvulFLAVERTChr01.69 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q76N23|H33_TOBAC (Histone H3.3 OS=Nicotiana tabacum OX=4097 GN=H3 PE=1 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 1.379e-95
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of PvulFLAVERTChr01.69 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q711T2|H33_PINPS (Histone H3.3 OS=Pinus pinaster OX=71647 PE=2 SV=3)

HSP 1 Score: 274.248 bits (700), Expect = 1.379e-95
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of PvulFLAVERTChr01.69 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q0JCT1|H33_ORYSJ (Histone H3.3 OS=Oryza sativa subsp. japonica OX=39947 GN=H3 PE=1 SV=2)

HSP 1 Score: 274.248 bits (700), Expect = 1.379e-95
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of PvulFLAVERTChr01.69 vs. ExPASy Swiss-Prot (2024)
Match: sp|A2XHJ3|H33_ORYSI (Histone H3.3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_011536 PE=3 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 1.379e-95
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of PvulFLAVERTChr01.69 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q71U98|H33_ORYCO (Histone H3.3 OS=Oryza coarctata OX=77588 PE=2 SV=3)

HSP 1 Score: 274.248 bits (700), Expect = 1.379e-95
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of PvulFLAVERTChr01.69 vs. ExPASy Swiss-Prot (2024)
Match: sp|P69244|H33_MEDSA (Histone H3.3 OS=Medicago sativa OX=3879 PE=1 SV=2)

HSP 1 Score: 274.248 bits (700), Expect = 1.379e-95
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of PvulFLAVERTChr01.69 vs. ExPASy Swiss-Prot (2024)
Match: sp|P69245|H33_LOLTE (Histone H3.3 OS=Lolium temulentum OX=34176 PE=2 SV=2)

HSP 1 Score: 274.248 bits (700), Expect = 1.379e-95
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of PvulFLAVERTChr01.69 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q3C2E5|H33_LOLMU (Histone H3.3 OS=Lolium multiflorum OX=4521 GN=RH3 PE=2 SV=3)

HSP 1 Score: 274.248 bits (700), Expect = 1.379e-95
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of PvulFLAVERTChr01.69 vs. Araport11
Match: | (Symbols: H3.3, HTR8 | histone 3.3 | chr5:3472591-3473349 REVERSE LENGTH=136)

HSP 1 Score: 274.248 bits (700), Expect = 1.442e-96
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of PvulFLAVERTChr01.69 vs. Araport11
Match: | (Symbols: H3.3, HTR5 | histone 3.3 | chr4:18557539-18558236 REVERSE LENGTH=136)

HSP 1 Score: 274.248 bits (700), Expect = 1.442e-96
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of PvulFLAVERTChr01.69 vs. Araport11
Match: | (Symbols: H3.3, HTR4 | histone 3.3 | chr4:18555840-18556417 REVERSE LENGTH=136)

HSP 1 Score: 274.248 bits (700), Expect = 1.442e-96
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of PvulFLAVERTChr01.69 vs. Araport11
Match: | (Symbols: H3.3, HTR4 | histone 3.3 | chr4:18555840-18556827 REVERSE LENGTH=164)

HSP 1 Score: 275.018 bits (702), Expect = 2.115e-96
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   29 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 164

[Close]

BLAST of PvulFLAVERTChr01.69 vs. Araport11
Match: | (Symbols: H3.1, HTR1 | histone 3.1 | chr5:26120099-26120509 REVERSE LENGTH=136)

HSP 1 Score: 265.774 bits (678), Expect = 3.986e-93
Identity = 132/136 (97.06%), Postives = 133/136 (97.79%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of PvulFLAVERTChr01.69 vs. Araport11
Match: | (Symbols: H3.1, HTR9 | histone 3.1 | chr5:3270478-3270888 REVERSE LENGTH=136)

HSP 1 Score: 265.774 bits (678), Expect = 3.986e-93
Identity = 132/136 (97.06%), Postives = 133/136 (97.79%), Query Frame = 0

Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

The following BLAST results are available for this feature:

BLAST of PvulFLAVERTChr01.69 vs. ExPASy TrEMBL (2024)
BLAST of PvulFLAVERTChr01.69 vs. ExPASy Swiss-Prot (2024)
BLAST of PvulFLAVERTChr01.69 vs. Araport11

BLAST of PvulFLAVERTChr01.69 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL)
Total hits: 10

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
tr\|A0A9Q1R5T3\|A0A9Q1R5T3_9SOLA	1.038e-93	100.00	Histone H3.3 OS=Anisodus acutangulus OX=402998 GN=...	[more]
tr\|A0A453QJ99\|A0A453QJ99_AEGTS	1.827e-93	100.00	Histone H2A/H2B/H3 domain-containing protein OS=Ae...	[more]
tr\|A0A8S9HTH7\|A0A8S9HTH7_BRACR	1.838e-93	100.00	Histone H3.3 OS=Brassica cretica OX=69181 GN=F2Q70...	[more]
tr\|A0A835I999\|A0A835I999_9MAGN	1.897e-93	100.00	Histone H2A/H2B/H3 domain-containing protein OS=Co...	[more]
tr\|A0A9Q1R5J9\|A0A9Q1R5J9_9SOLA	2.078e-93	100.00	Histone H3.3 OS=Anisodus acutangulus OX=402998 GN=...	[more]
tr\|A0A0D3AQT1\|A0A0D3AQT1_BRAOL	2.312e-93	100.00	Histone H3.3 OS=Brassica oleracea var. oleracea OX...	[more]
tr\|A0A6D2IDN5\|A0A6D2IDN5_9BRAS	2.356e-93	100.00	Histone H3.3 OS=Microthlaspi erraticum OX=1685480 ...	[more]
tr\|A0A453ST68\|A0A453ST68_AEGTS	2.513e-93	100.00	Histone H2A/H2B/H3 domain-containing protein OS=Ae...	[more]
tr\|A0A6D2HXN6\|A0A6D2HXN6_9BRAS	3.152e-93	100.00	Histone H3.3 OS=Microthlaspi erraticum OX=1685480 ...	[more]
tr\|A0A2K1J132\|A0A2K1J132_PHYPA	3.281e-93	100.00	Histone H3 OS=Physcomitrium patens OX=3218 GN=PHYP...	[more]

BLAST of PvulFLAVERTChr01.69 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot)
Total hits: 10

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
sp\|P80553\|H3_NARPS	1.379e-95	100.00	Histone H3 OS=Narcissus pseudonarcissus OX=39639 P...	[more]
sp\|Q71H73\|H33_VITVI	1.379e-95	100.00	Histone H3.3 OS=Vitis vinifera OX=29760 PE=2 SV=3	[more]
sp\|Q76N23\|H33_TOBAC	1.379e-95	100.00	Histone H3.3 OS=Nicotiana tabacum OX=4097 GN=H3 PE...	[more]
sp\|Q711T2\|H33_PINPS	1.379e-95	100.00	Histone H3.3 OS=Pinus pinaster OX=71647 PE=2 SV=3	[more]
sp\|Q0JCT1\|H33_ORYSJ	1.379e-95	100.00	Histone H3.3 OS=Oryza sativa subsp. japonica OX=39...	[more]
sp\|A2XHJ3\|H33_ORYSI	1.379e-95	100.00	Histone H3.3 OS=Oryza sativa subsp. indica OX=3994...	[more]
sp\|Q71U98\|H33_ORYCO	1.379e-95	100.00	Histone H3.3 OS=Oryza coarctata OX=77588 PE=2 SV=3	[more]
sp\|P69244\|H33_MEDSA	1.379e-95	100.00	Histone H3.3 OS=Medicago sativa OX=3879 PE=1 SV=2	[more]
sp\|P69245\|H33_LOLTE	1.379e-95	100.00	Histone H3.3 OS=Lolium temulentum OX=34176 PE=2 SV...	[more]
sp\|Q3C2E5\|H33_LOLMU	1.379e-95	100.00	Histone H3.3 OS=Lolium multiflorum OX=4521 GN=RH3 ...	[more]

BLAST of PvulFLAVERTChr01.69 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11)
Total hits: 10

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
\|	1.442e-96	100.00	Symbols: H3.3, HTR8 \| histone 3.3 \| chr5:3472591-3...	[more]
\|	1.442e-96	100.00	Symbols: H3.3, HTR5 \| histone 3.3 \| chr4:18557539-...	[more]
\|	1.442e-96	100.00	Symbols: H3.3, HTR5 \| histone 3.3 \| chr4:18557539-...	[more]
\|	1.442e-96	100.00	Symbols: H3.3, HTR5 \| histone 3.3 \| chr4:18557539-...	[more]
\|	1.442e-96	100.00	Symbols: H3.3, HTR4 \| histone 3.3 \| chr4:18555840-...	[more]
\|	1.442e-96	100.00	Symbols: H3.3, HTR4 \| histone 3.3 \| chr4:18555840-...	[more]
\|	1.442e-96	100.00	Symbols: H3.3, HTR4 \| histone 3.3 \| chr4:18555840-...	[more]
\|	2.115e-96	100.00	Symbols: H3.3, HTR4 \| histone 3.3 \| chr4:18555840-...	[more]
\|	3.986e-93	97.06	Symbols: H3.1, HTR1 \| histone 3.1 \| chr5:26120099-...	[more]
\|	3.986e-93	97.06	Symbols: H3.1, HTR9 \| histone 3.1 \| chr5:3270478-3...	[more]

InterPro

Analysis Name: Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL
Date Performed: 2024-08-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000164	Histone H3/CENP-A	PRINTS	PR00622	HISTONEH3	coord: 114..135 score: 94.86 coord: 98..114 score: 96.93 coord: 80..98 score: 82.38 coord: 3..17 score: 97.1 coord: 17..31 score: 92.32 coord: 34..55 score: 91.8 coord: 58..75 score: 97.46
IPR000164	Histone H3/CENP-A	PANTHER	PTHR11426	HISTONE H3	coord: 1..135
None	No IPR available	FUNFAM	G3DSA:1.10.20.10:FF:000078		coord: 2..50 e-value: 1.2E-31 score: 110.0
None	No IPR available	FUNFAM	G3DSA:1.10.20.10:FF:000044		coord: 53..136 e-value: 1.6E-55 score: 187.0
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 7..132 e-value: 4.1E-45 score: 164.4
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 2..136 e-value: 6.1E-76 score: 254.7
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 2..133

Analysis Name: InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0
Date Performed: 2024-08-19

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000164	Histone H3/CENP-A	PRINTS	PR00622	HISTONEH3	coord: 114..135 score: 94.86 coord: 98..114 score: 96.93 coord: 80..98 score: 82.38 coord: 3..17 score: 97.1 coord: 17..31 score: 92.32 coord: 34..55 score: 91.8 coord: 58..75 score: 97.46
IPR000164	Histone H3/CENP-A	PANTHER	PTHR11426	HISTONE H3	coord: 1..135
None	No IPR available	FUNFAM	G3DSA:1.10.20.10:FF:000078		coord: 2..50 e-value: 1.2E-31 score: 110.0
None	No IPR available	FUNFAM	G3DSA:1.10.20.10:FF:000044		coord: 53..136 e-value: 1.6E-55 score: 187.0
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 7..132 e-value: 4.1E-45 score: 164.4
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 2..136 e-value: 6.1E-76 score: 254.7
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 2..133

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr01:1232533..1234052+
coding sequence from alignment at Chr01:1232533..1234052+

mRNA sequence

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.69 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.69; Name=PvulFLAVERTChr01.69; organism=Phaseolus vulgaris; type=mRNA; length=872bp
GCTTATATAAATACCTAAATCTGTTTTCTCTAGTTCGCATCtcaaacatt
tttcatttgcGTATTTGAAATAtcaattttctctcttttgaaCAATCTTC
TTCCATGGCTCGTACCAAGCAAACCGCTCGCAAATCCACCGGCGGAAAGG
CCCCGAGGAAGCAGCTCGCCACCAAGGCTGCGAGAAAATCTGCACCCACA
ACCGGTGGAGTGAAGAAGCCCCATCGTTATCGCCCTGGAACCGTTGCTCT
TCgTGAGATCCGTAAATACCAGAAAAGTACTGAGCTTCTGATCCGCAAGC
TTCCCTTCCAGCGTCTTGTTCGTGAAATCGCCCAAGATTTCAAGACTGAT
TTGAGGTTCCAGAGTCACGCTGTTCTTGCCCTTCAGGAAGCTGCTGAGGC
CTATTTGGTTGGTTTGTTTGAAGATACCAATTTGTGTGCGATCCACGCCA
AGAGGGTTACCATCATGCCCAAAGATATTCAACTCGCTCGCCGGATCCGT
GGAGAACGTGCTTAGGCCAATTCCATGATCTCATTTACCTATTTGTTTCG
CAatatttttcttgcttttagGGTTTTAGTTCTCTTTGAGTTTGTTTTCT
GTTGTACAGAAGATAGATATATGGACcagtttttcttttctaaatcgGAA
AAGActaatatttgaataaatagATTGTAGCTATTATAAATCTCTGTTGT
GAAAATTGAGTAGATTTTCATTTCATATCATAACGTATTCTTTATCTTCT
GTGTGGAGATTGAAATTAAACTCTTTCGGCTCATTGTTTTTTGGTAACGT
GTATGTAAATAATGCCGGAAAAACTCTGTTGATTGAACTCGATGATCAAC
TTGTGTGCTCATTTTCGTTTTT

protein sequence of drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.69

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.69 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.69; Name=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.69; organism=Phaseolus vulgaris; type=polypeptide; length=136bp
MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR
EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

mRNA from alignment at Chr01:1232533..1234052+

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.69 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.69; Name=PvulFLAVERTChr01.69; organism=Phaseolus vulgaris; type=mRNA; length=1520bp; location=Sequence derived from: Chr01:1232533..1234052+ (Phaseolus vulgaris
GCTTATATAAATACCTAAATCTGTTTTCTCTAGTTCGCATCtcaaacatt
tttcatttgcGTATTTGAAATAtcaattttctctcttttgaaCAATCTTC
TTCCATGGCTCGTACCAAGCAAACCGCTCGCAAATCCACCGGCGGAAAGG
CCCCGAGGAAGCAGCTCGCCACCAAGGTACTCGATTTAGGGTTTTCTTAT
GATGCTAGGGTTTCTGATTACGACGTTTTTCGAAGTCAATTGCATGTTGT
TGTTAATCTACAAAGGgctttttaaattcaattgcATGTTTGGGTTTTCC
TATGCTAGGGTTTCTGATTAGGACCTTTTTCGAAGTCAATTGCTAATATT
TGTTGATTGACTATTggattttaaaattcaattgtATATTAGGGTTTTCT
TGTGCTAGGGTTTCTGATTATGACGTTTTTGAAAGTGAATTgcatattct
tttttatttacaaagAGATTATGAAATTCGTTTGTAATTTAGGGTTTTCT
CATGCTTAGTTTCCTGATCATGACGTTTTTTGGTTTCAATTGCATATTCT
TGTTGATAGACATTGGGTTTTCTACAATTTGTTTTTCCAATTACCTATTT
TGAAGCTAATTATTGTTTAATTCATGGTTTATCTGTAGGCTGCGAGAAAA
TCTGCACCCACAACCGGTGGAGTGAAGAAGCCCCATCGTTATCGCCCTGG
AACCGTTGCTCTTCggtaattcttttttctttaatccGAATTTGTTGTGT
TTCTACTCGTTATCTCTCATTCTCTcagtattgattttttttttttccct
ttattTTCAGTGAGATCCGTAAATACCAGAAAAGTACTGAGCTTCTGATC
CGCAAGCTTCCCTTCCAGCGTCTTGTTCGTGAAATCGCCCAAGATTTCAA
GGTGTGTTGAAATTCGAAAACCCTAATTGTGTTTACCTATCCCCTTTTGC
TTCTATATTCGTTGTattgaatattttgtttgtgTGTTGCAGACTGATTT
GAGGTTCCAGAGTCACGCTGTTCTTGCCCTTCAGGAAGCTGCTGAGGCCT
ATTTGGTTGGTTTGTTTGAAGATACCAATTTGTGTGCGATCCACGCCAAG
AGGGTTACCATCATGCCCAAAGATATTCAACTCGCTCGCCGGATCCGTGG
AGAACGTGCTTAGGCCAATTCCATGATCTCATTTACCTATTTGTTTCGCA
atatttttcttgcttttagGGTTTTAGTTCTCTTTGAGTTTGTTTTCTGT
TGTACAGAAGATAGATATATGGACcagtttttcttttctaaatcgGAAAA
GActaatatttgaataaatagATTGTAGCTATTATAAATCTCTGTTGTGA
AAATTGAGTAGATTTTCATTTCATATCATAACGTATTCTTTATCTTCTGT
GTGGAGATTGAAATTAAACTCTTTCGGCTCATTGTTTTTTGGTAACGTGT
ATGTAAATAATGCCGGAAAAACTCTGTTGATTGAACTCGATGATCAACTT
GTGTGCTCATTTTCGTTTTT

Coding sequence (CDS) from alignment at Chr01:1232533..1234052+

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.69 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr01.69; Name=PvulFLAVERTChr01.69; organism=Phaseolus vulgaris; type=CDS; length=411bp; location=Sequence derived from: Chr01:1232533..1234052+ (Phaseolus vulgaris
ATGGCTCGTACCAAGCAAACCGCTCGCAAATCCACCGGCGGAAAGGCCCC
GAGGAAGCAGCTCGCCACCAAGGCTGCGAGAAAATCTGCACCCACAACCG
GTGGAGTGAAGAAGCCCCATCGTTATCGCCCTGGAACCGTTGCTCTTCgT
GAGATCCGTAAATACCAGAAAAGTACTGAGCTTCTGATCCGCAAGCTTCC
CTTCCAGCGTCTTGTTCGTGAAATCGCCCAAGATTTCAAGACTGATTTGA
GGTTCCAGAGTCACGCTGTTCTTGCCCTTCAGGAAGCTGCTGAGGCCTAT
TTGGTTGGTTTGTTTGAAGATACCAATTTGTGTGCGATCCACGCCAAGAG
GGTTACCATCATGCCCAAAGATATTCAACTCGCTCGCCGGATCCGTGGAG
AACGTGCTTAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000164	Histone_H3/CENP-A
IPR007125	Histone_H2A/H2B/H3
IPR009072	Histone-fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0030527	structural constituent of chromatin
GO:0003677	DNA binding
GO:0046982	protein heterodimerization activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0000786	nucleosome

Search form

PvulFLAVERTChr01.69