PvulFLAVERTChr04.973
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of PvulFLAVERTChr04.973 vs. ExPASy TrEMBL (2024)
Match: tr|V7C613|V7C613_PHAVU (Mediator of RNA polymerase II transcription subunit 25 OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G160600g PE=3 SV=1) HSP 1 Score: 904.049 bits (2335), Expect = 0.000e+0 Identity = 436/441 (98.87%), Postives = 439/441 (99.55%), Query Frame = 0 Query: 56 MYNSNYNNIGLDLQYIHWTRDVNYFLDILSCLTFNGDNLNRHVMVEGLAEALVMFPRPSDVMTTQEYYNGERHCVLIAARDPFPRRMVVSVPEITKEGIIGTQSHHVNADFYEVAEMFGPLAVSLSIISPMLHPIFGVIFNMGNDGSVLSTTPISNTGMDQFTVLLSRKFKEAHDAFRGKRKMDQRTEEWLESMKRINVPRFPMNVAKYLQ-GEGSSKERDRKVVLGGIPENWSMFPRSTGSSFNIQPYSSPMLPSATNGGGGHQHSAFQGPRFGPLGRSALGSSTWAPPPAPPATPQLNLPNALPFSPFTNFQHYSLAWEGYLVGNINNIASSFHIAKALKRASSPATLAKDWSRRLEILLYLSEKAVNHTIRNYSEPIDFVFITIMQFNNLDLYEYLKNGNLCAKICLPTQTMILSPTESKHHYIGTIFLGDTVFVEPL 495 MYNSNYNNIGLDLQYIHWTRDVNYFLDILSCLTFNGDNLNRHVMVEGLAEALVMFPRPSD+MTTQEYYNGERHCVLIAARDPFPRRMVVSVPEITKEGIIGTQSHHVNADFYEVAEMFGPLAVSLSIISPMLHPIFGVIFNMGNDGSVLSTTPISNTGMDQFTVLLSRKFKEAHDAFRGKRKMDQRTEEWLESMKRINVPRFP NVAKYLQ GEGSSKERDRKVVLGG+PENWSMFPRSTGSSFNIQPYSSPMLPSATNGGGGHQHSAFQGPRFGPLGRSALGSSTWAPPPAPPATPQLNLPNALPFSPFTNFQHYSLAWEGYLVGNINNIASSFHIAKALKRASSPATLAKDWSRRLEILLYLSEKAVNHTIRNYSEPIDFVFITIMQFNNLDLYEYLK+GNLCAKICLPTQTMILSPTESKHHYIGTIFLGDTVFVEPL Sbjct: 1 MYNSNYNNIGLDLQYIHWTRDVNYFLDILSCLTFNGDNLNRHVMVEGLAEALVMFPRPSDIMTTQEYYNGERHCVLIAARDPFPRRMVVSVPEITKEGIIGTQSHHVNADFYEVAEMFGPLAVSLSIISPMLHPIFGVIFNMGNDGSVLSTTPISNTGMDQFTVLLSRKFKEAHDAFRGKRKMDQRTEEWLESMKRINVPRFP-NVAKYLQAGEGSSKERDRKVVLGGMPENWSMFPRSTGSSFNIQPYSSPMLPSATNGGGGHQHSAFQGPRFGPLGRSALGSSTWAPPPAPPATPQLNLPNALPFSPFTNFQHYSLAWEGYLVGNINNIASSFHIAKALKRASSPATLAKDWSRRLEILLYLSEKAVNHTIRNYSEPIDFVFITIMQFNNLDLYEYLKSGNLCAKICLPTQTMILSPTESKHHYIGTIFLGDTVFVEPL 440
BLAST of PvulFLAVERTChr04.973 vs. ExPASy TrEMBL (2024)
Match: tr|K7N145|K7N145_SOYBN (Mediator of RNA polymerase II transcription subunit 25 OS=Glycine max OX=3847 GN=102668050 PE=3 SV=1) HSP 1 Score: 488.804 bits (1257), Expect = 3.682e-165 Identity = 273/574 (47.56%), Postives = 353/574 (61.50%), Query Frame = 0 Query: 1 MAAKKWLNIVVDANSALAPHWPKIVSEYLEKIVRTFFDNSIEEEASGAACELGLLMYNSNYNNIGLDLQYIHWTRDVNYFLDILSCLTFNGDNLNRHVMVEGLAEALVMFPRPSDVMTTQEYYNGERHCVLIAARDPFPRRMVVSVPEITKEGIIGTQSHHVNADFYEVAEMFGPLAVSLSIISPMLHPIFGVIFNMGNDGSVLSTTPISNTGMDQFTVLLSRKF-----------------KEAHDAFR-------------------------GKRKMDQRTEEWL--------------ESMKRINVPRFPMNVAK---YLQGEGSSK----------ERDRKVVLG------GIPENWSMFPRSTGSSFNIQPYSS-PMLPSATNGGGGHQHSAFQGPRFGPLGRSALGSSTWAPPPAPPATPQLNLPNAL--PFSPFTNFQHYSLAWEGYLVGNINNIASSFHI-AKALKRASSPATLAKDWSRRLEILLYLSEKAVNHTIRNYSEPIDFVFITIMQFNNLDLYEYLKNGNLCAKICLPTQTMILSPTESKHHYIGTIFLGDTVFVEPL 495 M KKWLN+++D NS L P+WPKIVSEYLEKIVRTF DNS EE + CE+GL+MYN N +++G ++QYIHWTRDV+YFL ILSCL F GD+LN++ MVEGLA AL +FPRPS+ MT QEYY+GERHC+LI ARDP P+RM+VSVPEI IGT+ H + ADFYEVA+MFG LAVSLSIISP+ HPIFGVIFNMGN+ S L+ TPIS+ +QF VLLSR F KE+ ++ + GK+ ++ ++ L S + + PM ++ ++ GEGS K + +G P SM P S G++F++QPYSS MLP A++ + FQ FGPLGR A G+ST PP P TPQ N P P S TNF Y L WEG L G I H+ K L++A+SP TL +W RLEI LYL +KAVNHT++ P+D+VF+ + QF+NLDL+++L N NL AKI LP+Q ++L+PT+SKHH+IG +F GDT+F+E L Sbjct: 1 MTTKKWLNLIIDGNSTLGPYWPKIVSEYLEKIVRTFIDNS-REEGANHHCEVGLVMYNDN-SDLGSNVQYIHWTRDVDYFLGILSCLVFKGDSLNQNTMVEGLASALTLFPRPSNKMTAQEYYDGERHCILITARDPIPKRMLVSVPEIQGR-FIGTKLHTLKADFYEVAKMFGSLAVSLSIISPIQHPIFGVIFNMGNNDSSLANTPISDCRNEQFIVLLSRNFREAHYALHEKRTMDPPTKESVESLKTTNDIILAIDFADDHEEDLFSIMMTGKQIIEADKDDRLVHDPISLLPLSVPNASTGEVGISTLPMVISTTPTFIVGEGSLKGVVGGNSGNCSTSTAIAVGMADPRDAPPAQNSMLPHSIGNTFDVQPYSSLSMLPYASSSSRSRPYLPFQVIGFGPLGRIAFGTSTGVPPA--PITPQFN-PYDFWPPPSSLTNFNDYLLEWEGSLAGKIVKKNRQLHLWVKVLRKATSPLTLTIEWPSRLEIALYLPQKAVNHTVKICRGPVDYVFLYLKQFDNLDLHDHLNNKNLSAKIHLPSQILMLTPTKSKHHFIGIVFPGDTIFIELL 568
BLAST of PvulFLAVERTChr04.973 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0JXA1|A0A8T0JXA1_PHAAN (Mediator of RNA polymerase II transcription subunit 25 OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0123260 PE=3 SV=1) HSP 1 Score: 455.292 bits (1170), Expect = 1.128e-152 Identity = 255/536 (47.57%), Postives = 329/536 (61.38%), Query Frame = 0 Query: 1 MAAKKWLNIVVDANSALAPHWPKIVSEYLEKIVRTFFDNSIEEEASGAACELGLLMYNSNYNNIGLDLQYIHWTRDVNYFLDILSCLTFNGDNLNRHVMVEGLAEALVMFPRPSDVMTTQEYYNGERHCVLIAARDPFPRRMVVSVPEITKEGIIGTQSHHVNADFYEVAEMFGPLAVSLSIISPMLHPIFGVIFNMGNDGSVLSTTPISNTGMDQFTVLLSRKFKEAHDAFRGKRKMDQRTEEWLESMKRINVPRFPM-NVAKYLQGEGSSKE--RDR-----KVVLG-------------------------GIPENWSM----FPRSTGSSFNIQPY----SSPMLPSATNGGGGHQHSAFQGPRFGPLGRSALGSSTWAPP--PAPPATPQLNLPNALPFSPFTNFQHYSLAWEGYLVGNINNIASSFHIAKALKRASSPATLAKDWSRRLEILLYLSEKAVNHTIRNYSEPIDFVFITIMQFNNLDLYEYLKNGNLCAKICLPTQTMILSPTESKHHYIGTIFLGDTVFVE 493 MA KWLNI VD NSALA +WP I S+ LEKIVR FF++S E GA ++GL+MYN+N NN GLD+QYI WTR+V+ FL +LS L FNG+N N+ MV+GLAEAL+MFPRPS+ MTT+EYYNG RHC+++AARDP P +M VSVPEI + +GTQ + VNADFY+VAE+F PLAVSLSIISP+ HP F VIFNMGN+GS L T PISN + QF V+LSR F+EAH A RGKR MD T + + N + + +AK + G + E RDR V L G+ E M RS+ +S NI PY + P + + T+ G + F P GR T+ P P PP TPQ N + P P +N + AW+G L+ + + KA +R +SP TL +WS RLE+ YL +KA+N+TI + PID+VF ++ FNNLDLYEYL NLCAK+ LP QT+I+SPT+++H YIGT+F D FV+ Sbjct: 1 MANNKWLNITVDGNSALASYWPNIFSDCLEKIVRNFFEDSRNE---GANAQVGLVMYNAN-NNPGLDVQYIPWTREVDSFLGVLSSLVFNGNNENQQTMVKGLAEALLMFPRPSNFMTTEEYYNGTRHCIVVAARDPIPAKMTVSVPEINQGTTVGTQLYTVNADFYDVAELFSPLAVSLSIISPVQHPCFEVIFNMGNNGSPLETDPISNFRIGQFNVILSRNFREAHVALRGKRTMDPPTNDIRVPIHYANDNQEDLFTIAKMMMSGGRNTEAARDRLETTNPVSLAVSDGFSTPAMFVSNAESSTREGSSEGLVEERGMADQPTSRSSENSLNILPYFALQTLPNITTTTSSSKGFARLPYLAAGFDPYGR-----PTYEPNGVPPPPITPQFNPIDFWPPQPSSNSLNLVQAWQGTLIAKTHRSRKNLQRGKAHRRVTSPFTLTNEWSSRLEVAFYLPQKALNYTITIFRGPIDYVFFYMLHFNNLDLYEYLMKKNLCAKVNLPFQTLIISPTKNRHFYIGTVFPADVTFVQ 527
BLAST of PvulFLAVERTChr04.973 vs. ExPASy TrEMBL (2024)
Match: tr|K7N146|K7N146_SOYBN (Mediator of RNA polymerase II transcription subunit 25 OS=Glycine max OX=3847 GN=102668050 PE=3 SV=1) HSP 1 Score: 419.468 bits (1077), Expect = 8.317e-139 Identity = 239/519 (46.05%), Postives = 309/519 (59.54%), Query Frame = 0 Query: 56 MYNSNYNNIGLDLQYIHWTRDVNYFLDILSCLTFNGDNLNRHVMVEGLAEALVMFPRPSDVMTTQEYYNGERHCVLIAARDPFPRRMVVSVPEITKEGIIGTQSHHVNADFYEVAEMFGPLAVSLSIISPMLHPIFGVIFNMGNDGSVLSTTPISNTGMDQFTVLLSRKFKEAHDAFR------------------------------------------GKRKMDQRTEEWL--------------ESMKRINVPRFPMNVAK---YLQGEGSSK----------ERDRKVVLG------GIPENWSMFPRSTGSSFNIQPYSS-PMLPSATNGGGGHQHSAFQGPRFGPLGRSALGSSTWAPPPAPPATPQLNLPNAL--PFSPFTNFQHYSLAWEGYLVGNINNIASSFHI-AKALKRASSPATLAKDWSRRLEILLYLSEKAVNHTIRNYSEPIDFVFITIMQFNNLDLYEYLKNGNLCAKICLPTQTMILSPTESKHHYIGTIFLGDTVFVEPL 495 MYN N +++G ++QYIHWTRDV+YFL ILSCL F GD+LN++ MVEGLA AL +FPRPS+ MT QEYY+GERHC+LI ARDP P+RM+VSVPEI IGT+ H + ADFYEVA+MFG LAVSLSIISP+ HPIFGVIFNMGN+ S L+ TPIS+ +QF VLLSR F+EAH A GK+ ++ ++ L S + + PM ++ ++ GEGS K + +G P SM P S G++F++QPYSS MLP A++ + FQ FGPLGR A G+ST PP P TPQ N P P S TNF Y L WEG L G I H+ K L++A+SP TL +W RLEI LYL +KAVNHT++ P+D+VF+ + QF+NLDL+++L N NL AKI LP+Q ++L+PT+SKHH+IG +F GDT+F+E L Sbjct: 1 MYNDN-SDLGSNVQYIHWTRDVDYFLGILSCLVFKGDSLNQNTMVEGLASALTLFPRPSNKMTAQEYYDGERHCILITARDPIPKRMLVSVPEIQGR-FIGTKLHTLKADFYEVAKMFGSLAVSLSIISPIQHPIFGVIFNMGNNDSSLANTPISDCRNEQFIVLLSRNFREAHYALHEKRTMDPPTKESVESLKTTNDIILAIDFADDHEEDLFSIMMTGKQIIEADKDDRLVHDPISLLPLSVPNASTGEVGISTLPMVISTTPTFIVGEGSLKGVVGGNSGNCSTSTAIAVGMADPRDAPPAQNSMLPHSIGNTFDVQPYSSLSMLPYASSSSRSRPYLPFQVIGFGPLGRIAFGTSTGVPPA--PITPQFN-PYDFWPPPSSLTNFNDYLLEWEGSLAGKIVKKNRQLHLWVKVLRKATSPLTLTIEWPSRLEIALYLPQKAVNHTVKICRGPVDYVFLYLKQFDNLDLHDHLNNKNLSAKIHLPSQILMLTPTKSKHHFIGIVFPGDTIFIELL 514
BLAST of PvulFLAVERTChr04.973 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445F0D7|A0A445F0D7_GLYSO (Mediator of RNA polymerase II transcription subunit 25 OS=Glycine soja OX=3848 GN=D0Y65_052975 PE=3 SV=1) HSP 1 Score: 419.468 bits (1077), Expect = 8.317e-139 Identity = 239/519 (46.05%), Postives = 309/519 (59.54%), Query Frame = 0 Query: 56 MYNSNYNNIGLDLQYIHWTRDVNYFLDILSCLTFNGDNLNRHVMVEGLAEALVMFPRPSDVMTTQEYYNGERHCVLIAARDPFPRRMVVSVPEITKEGIIGTQSHHVNADFYEVAEMFGPLAVSLSIISPMLHPIFGVIFNMGNDGSVLSTTPISNTGMDQFTVLLSRKFKEAHDAFR------------------------------------------GKRKMDQRTEEWL--------------ESMKRINVPRFPMNVAK---YLQGEGSSK----------ERDRKVVLG------GIPENWSMFPRSTGSSFNIQPYSS-PMLPSATNGGGGHQHSAFQGPRFGPLGRSALGSSTWAPPPAPPATPQLNLPNAL--PFSPFTNFQHYSLAWEGYLVGNINNIASSFHI-AKALKRASSPATLAKDWSRRLEILLYLSEKAVNHTIRNYSEPIDFVFITIMQFNNLDLYEYLKNGNLCAKICLPTQTMILSPTESKHHYIGTIFLGDTVFVEPL 495 MYN N +++G ++QYIHWTRDV+YFL ILSCL F GD+LN++ MVEGLA AL +FPRPS+ MT QEYY+GERHC+LI ARDP P+RM+VSVPEI IGT+ H + ADFYEVA+MFG LAVSLSIISP+ HPIFGVIFNMGN+ S L+ TPIS+ +QF VLLSR F+EAH A GK+ ++ ++ L S + + PM ++ ++ GEGS K + +G P SM P S G++F++QPYSS MLP A++ + FQ FGPLGR A G+ST PP P TPQ N P P S TNF Y L WEG L G I H+ K L++A+SP TL +W RLEI LYL +KAVNHT++ P+D+VF+ + QF+NLDL+++L N NL AKI LP+Q ++L+PT+SKHH+IG +F GDT+F+E L Sbjct: 1 MYNDN-SDLGSNVQYIHWTRDVDYFLGILSCLVFKGDSLNQNTMVEGLASALTLFPRPSNKMTAQEYYDGERHCILITARDPIPKRMLVSVPEIQGR-FIGTKLHTLKADFYEVAKMFGSLAVSLSIISPIQHPIFGVIFNMGNNDSSLANTPISDCRNEQFIVLLSRNFREAHYALHEKRTMDPPTKESVESLKTTNDIILAIDFADDHEEDLFSIMMTGKQIIEADKDDRLVHDPISLLPLSVPNASTGEVGISTLPMVISTTPTFIVGEGSLKGVVGGNSGNCSTSTAIAVGMADPRDAPPAQNSMLPHSIGNTFDVQPYSSLSMLPYASSSSRSRPYLPFQVIGFGPLGRIAFGTSTGVPPA--PITPQFN-PYDFWPPPSSLTNFNDYLLEWEGSLAGKIVKKNRQLHLWVKVLRKATSPLTLTIEWPSRLEIALYLPQKAVNHTVKICRGPVDYVFLYLKQFDNLDLHDHLNNKNLSAKIHLPSQILMLTPTKSKHHFIGIVFPGDTIFIELL 514
BLAST of PvulFLAVERTChr04.973 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9VH26|A0A0L9VH26_PHAAN (Mediator of RNA polymerase II transcription subunit 25 OS=Phaseolus angularis OX=3914 GN=LR48_Vigan10g018500 PE=4 SV=1) HSP 1 Score: 404.06 bits (1037), Expect = 1.244e-134 Identity = 232/396 (58.59%), Postives = 260/396 (65.66%), Query Frame = 0 Query: 109 MFPRPSDVMTTQEYYNGERHCVLIAARDPFPRRMVVSVPEITKEGIIGTQSHHVNADFYEVAEMFGPLAVSLSIISPMLHPIFGVIFNMGNDGSVLSTTPISNTGMDQFTVLLSRKFKEAHDAFRGKRKMDQRTEEWLESMKRINVPRFPMNVAKYLQ-----------GEGSSK-----ERDRKVVLGGIPENWSMFPRSTGSSFNIQPYSSPMLPSATNGGGGHQHSAFQGPRFGPLGRSALGSSTWAPPPAPPATPQLNLPNALPFSP-FTNFQHYSLAWEGYLVGNINNIASSFHIAKALKRASSPATLAKDWSRRLEILLYLSEKAVNHTIRNYSEPIDFVFITIMQFNNLDLYEYLKNGNLCAKICLPTQTMILSPTESKHHYIGTIFLG 487 MFPRPS+VMT QEYYNGERHCV++AARDPFP RM+VSVPEITKEGIIGT H+VNADFYEVAEMFGP NDGS++ST+PI +T MDQFTVLLSRKFKEAHDAFRGKR MD TEEW+ESMKR N RFP+N A + Q GEGSSK ERD VLGG+ SM P STG+S N+QPY ATN + G + GRSA+GSST APP + ATPQ N N LPFSP FTNFQ Y AWEG LVGNI+N SS IAKALKR +SP T+ YSEP+D+VF +IMQFNNLDLYE+LKN LCAKI LP+QT+ILS TESK HYIGTIFLG Sbjct: 44 MFPRPSNVMTAQEYYNGERHCVVVAARDPFPTRMLVSVPEITKEGIIGTNLHYVNADFYEVAEMFGP----------------------ANDGSIVSTSPICSTRMDQFTVLLSRKFKEAHDAFRGKRIMDPSTEEWIESMKRTNNTRFPINFANHCQAMVSTTPTLTAGEGSSKGVVMEERDNMGVLGGM----SMLPGSTGNSLNVQPY-------ATN----NGGGGGGGHQHFQFGRSAVGSSTRAPPAS--ATPQFNHTNTLPFSPSFTNFQPYVHAWEGCLVGNIHNNRSSILIAKALKRETSPLTI-------------------------YSEPVDYVFFSIMQFNNLDLYEHLKNKKLCAKIRLPSQTLILSATESKDHYIGTIFLG 375 HSP 2 Score: 76.6406 bits (187), Expect = 3.226e-11 Identity = 35/43 (81.40%), Postives = 38/43 (88.37%), Query Frame = 0 Query: 1 MAAKKWLNIVVDANSALAPHWPKIVSEYLEKIVRTFFDNSIEE 43 MA KKWLNI+VD +SAL P+WP IVSEYLEKIVRTFF NSIEE Sbjct: 1 MAPKKWLNILVDGSSALGPYWPNIVSEYLEKIVRTFFYNSIEE 43
BLAST of PvulFLAVERTChr04.973 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6LUL6|A0A4D6LUL6_VIGUN (Mediator of RNA polymerase II transcription subunit 25 OS=Vigna unguiculata OX=3917 GN=DEO72_LG5g202 PE=3 SV=1) HSP 1 Score: 407.142 bits (1045), Expect = 5.710e-131 Identity = 236/436 (54.13%), Postives = 267/436 (61.24%), Query Frame = 0 Query: 1 MAAKKWLNIVVDANSALAPHWPKIVSEYLEKIVRTFFDNSIEEEASGAACELGLLMYNSNYNNIGLDLQYIHWTRDVNYFLDILSCLTFNGDN-LNRHVMVEGLAEALVMFPRPSDVMTTQEYYNGERHCVLIAARDPFPRRMVVSVPEITKEGIIGTQSHHVNADFYEVAEMFGPLAVSLSIISPMLHPIFGVIFNMGNDGSVLSTTPISNTGMDQFTVLLSRKFKEAHDAFRGKRKMDQRTEEWLESMKRINVPRFPMNVAKYLQ-GEGSSK-----ERDRKVVLGGIPENWSMFPRSTGSSFNIQPYSSPMLPSATNGGGGHQHSAFQGPRFGPLGRSALGSSTWAPPPAPPATPQLNLPNALPFSP-FTNFQHYSLAWEGYLVGNINNIASSFHIAKALKRASSPATLAKDWSRRLEILLYLSEKAVNHTIR 428 MAAKKWLNIVVD +SAL P+WP IVSEYL++IVR Y N + +DVNYFLDILSCL FNGDN LNR+VMVEGLA+AL+MFPRPS+VMT QEYYNG+RHCV++AARDPFPRR +VSVPEIT GIIGT+ HHVNADFYEVAEMFGP GNDGS++S PIS+ M++FTVLLSRKFKEAH+AFRGKR MD TEEW+ESMKR N N A L GEGSSK ERD K VLGGI ENWSMFP STG+SFN+QP+SS L ATN G G H Q FSP FTNFQ Y+ AWE ALKRA+SP TL +DWS RL+I+LYLSEKAV HTI+ Sbjct: 426 MAAKKWLNIVVDGSSALGPYWPNIVSEYLQEIVR--------------------------YENFC-------YFKDVNYFLDILSCLAFNGDNNLNRNVMVEGLAKALMMFPRPSNVMTIQEYYNGQRHCVVVAARDPFPRRSLVSVPEITNGGIIGTKLHHVNADFYEVAEMFGP----------------------GNDGSLVSKIPISSIRMNEFTVLLSRKFKEAHNAFRGKRTMDPHTEEWVESMKRTN------NTAPTLTAGEGSSKGMVMEERDNKGVLGGISENWSMFPHSTGNSFNVQPHSSSNLLYATNNGSGGAHQHHQT-----------------------------------FSPYFTNFQLYNHAWE------------------ALKRATSPLTLTEDWSSRLDIILYLSEKAVTHTIK 747 HSP 2 Score: 324.324 bits (830), Expect = 4.944e-99 Identity = 192/415 (46.27%), Postives = 249/415 (60.00%), Query Frame = 0 Query: 1 MAAKKWLNIVVDANSALAPHWPKIVSEYLEKIVRTFFDNSIEEEASGAACELGLLMYNSNYNNIGLDLQYIHWTRDVNYFLDILSCLTFNGDNLNRHVMVEGLAEALVMFPRPSDVMTTQEYYNGERHCVLIAARDPFPRRMVVSVPEITKEGIIGTQSHHVNADFYEVAEMFGPLAVSLSIISPMLHPIFGVIFNMGNDGSVLSTTPISNTGMDQFTVLLSRKFKEAHDAFRGKRKMDQRTEEWL-------------------------------ESMKRINVPRFPMNVAKYLQGEGSSKERDRKVV-----LGGIPENWSMFPRSTGSSFNIQPYSSPM-LPS-ATNGGGGHQHSAFQGPRFGPLGRSALGSSTWAPP--PAPPATPQLNLPNALPFSPFTNFQHYSLAWE 375 MA KWLNIVVD NSALAP+WP I S+ L+KIVRTFF++S E GA ++GL+MYN+N NN GLD+QYI WT++V+ FL +LS L FNG+N N+H MV+GLAEAL+MFPRPS+ MTT+EYYN RHC+++AARDP P++M+VSVPE+ +GTQ + VNADFY+VAE+FGP A SLSIISP+ HP F VIFNMGN+GS L T PISN + +F V+LSR FKEAH A RGK MD T + + ++ ++ P +A + GEG S+ V +G P + S S+ +SFNI Y SP LP+ AT G + + G G T+ P P PP TPQ N + P P + + AW+ Sbjct: 1 MANNKWLNIVVDGNSALAPYWPNIFSDCLQKIVRTFFEDSRNE---GANAQVGLVMYNAN-NNPGLDIQYIPWTKEVDNFLGVLSSLLFNGNNENQHTMVKGLAEALLMFPRPSNFMTTEEYYNETRHCIVVAARDPIPQKMLVSVPELNHGKTVGTQIYTVNADFYDVAELFGPFAASLSIISPVQHPCFEVIFNMGNNGSPLETAPISNFRIGEFNVILSRNFKEAHVALRGKETMDPPTNDVMVPIHYASDNQEDLFTIAKMMMSGGRNTTNPVSAVSNVSTSATPA-MAVSITGEGCSEGLVEGVSGMADPMGFPPTHNSTPSASSENSFNILTYLSPQTLPNLATITTTGSSSNGLSRIPYLAAGFDRYGRPTYEPNGVPPPPVTPQFNPFDFWPPQPSSISLNLVQAWQ 410
BLAST of PvulFLAVERTChr04.973 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q0EME9|A0A3Q0EME9_VIGRR (Mediator of RNA polymerase II transcription subunit 25 OS=Vigna radiata var. radiata OX=3916 GN=LOC111241018 PE=3 SV=1) HSP 1 Score: 383.259 bits (983), Expect = 2.495e-126 Identity = 210/443 (47.40%), Postives = 273/443 (61.63%), Query Frame = 0 Query: 56 MYNSNYNNIGLDLQYIHWTRDVNYFLDILSCLTFNGDNLNRHVMVEGLAEALVMFPRPSDVMTTQEYYNGERHCVLIAARDPFPRRMVVSVPEITKEGIIGTQSHHVNADFYEVAEMFGPLAVSLSIISPMLHPIFGVIFNMGNDGSVLSTTPISNTGMDQFTVLLSRKFKEAHDAFRGKRKMDQRTEEWLESMKRINVPRFPMNVAKYLQGEGSSKERDRKVVLGGIPENWSMFPRSTGSSFNIQP-YSSPMLPSA--TNGGGGHQHSAFQGPRFGPLGRSALGSSTWAPPPAPPATPQLNLPNALPFSPFTNFQHYSLAWEGYLVGNINNIASSFHIAKALKRASSPATLAKDWSRRLEILLYLSEKAVNHTIRNYSEPIDFVFITIMQFNNLDLYEYLKNGNLCAKICLPTQTMILSPTESKHHYIGTIFLGDTVFVEPL 495 MYN+N N D+Q+IHWT +V+YFL +LS L FNG+N N+H MV+GL EAL++FPRPSDVMT +EYYNG RHC+LIA+ DP PRRM+VS+P+I K I GTQ H +N DF EVAEMFGPLAVSLSIIS + HPIFGVIFNMGN+GS + TTP S + + VLL+R FKEAHDA GKR++D T+E ++SM+ N VA + G+ +P + SMF +S G+ N P S P+LP A + H F F P GR G +T EG L G I ++ KAL+R +SP TL +WS RLEI LYL +K +++ I + PID+VF I+ FNNLDLYE+L N N+ AKI LP+Q +I+SPT+++H+YIGTIF DT F++ + Sbjct: 1 MYNANSN---ADVQHIHWTGEVDYFLGVLSSLVFNGNNGNQHTMVQGLGEALMLFPRPSDVMTKEEYYNGSRHCILIASGDPVPRRMLVSLPQIDKGRIFGTQLHTLNVDFCEVAEMFGPLAVSLSIISAVQHPIFGVIFNMGNNGSPIVTTPNSIIRIGELNVLLARNFKEAHDALGGKRRVDPATKESVKSMRMTN-----EEVANMIDPRGA------------LPADDSMFIQSRGNIVNTAPSLSRPVLPYACTSTSSSTRPHLPFLAAGFDPYGRPVFGPTT----------------------------------EGTLFGKIQRNRTNTQRGKALRRVTSPPTLTYEWSSRLEISLYLPKKTIDYMITIHFGPIDYVFFDILHFNNLDLYEHLTNKNVSAKINLPSQILIISPTKNRHYYIGTIFPSDTTFIQKI 389
BLAST of PvulFLAVERTChr04.973 vs. ExPASy TrEMBL (2024)
Match: tr|V7C3Q4|V7C3Q4_PHAVU (Mediator of RNA polymerase II transcription subunit 25 (Fragment) OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G1605000g PE=3 SV=1) HSP 1 Score: 345.51 bits (885), Expect = 2.892e-110 Identity = 209/493 (42.39%), Postives = 284/493 (57.61%), Query Frame = 0 Query: 47 GAACELGLLMYNSNYNNIGLDLQYIHWTRDVNYFLDILSCLTFNGDNLNRHVMVEGLAEALVMFPRPSDVMTTQEYYNGERHCVLIAARDPFPRRMVVSVPEITKEGIIGTQSHHVNADFYEVAEMFGPLAVSLSIISPMLHPIFGVIFNMGNDGSVLSTTPISNTGMDQFTVLLSRKFKEAHDAFRGKRKMDQRTEEWLESMKRINVPRFPMNVAKYLQGEGSSKERDRKVVLGGIPENWSMFPR-STGSSFNIQPYSSPMLPSATNGGGGHQHSAFQGPRFGPL-GRSALGSSTWAPPPAPPA----TP---QLNLPNALPF------------SPFTNFQHYSLAWEGYLVGNINNIASS---------------------FHIAKALKRASSPATLAKDWSRRLEILLYLSEKAVNHTIRNYSEPIDFVFITIMQFNNLDLYEYLKNGNLCAKICLPTQTMILSPTESKHHYIGTIFLGDTV--FVEPL 495 GA ++GL++YN+N +N GL +QYI+WT++V+ FL +L L F G+N N+H +V+GLAEALVMFPRPS+VMT +EYY+G RHC++IAARDP P RM VSVPEI++ IGTQ + NADFY+VAE+FGPLAVSLSIISP+ HP F VIFNMG+ G+ +PISN + F VLLSR F+EAH A RGKR MD T + + F + +G + DR GGI + P ST + F+ P + P++T G Q +G + G SA+G P PPA TP N N LP+ P F G + N +A + + +A RA+SP+TL +WS RLE YL +KA+ +TI + PID+VF ++ FNNLD +E+L NLCA++ LPTQ +I+SPTE++H+Y+GT+F +V F+E L Sbjct: 1 GANAQVGLILYNAN-DNPGLGVQYIYWTKEVDDFLAVLPSLVFTGNNENQHTIVQGLAEALVMFPRPSNVMTAEEYYHGTRHCIVIAARDPVPLRMPVSVPEISRGKTIGTQLYTANADFYDVAELFGPLAVSLSIISPVHHPCFEVIFNMGSIGTEQENSPISNIRIGHFNVLLSRNFREAHVALRGKRAMDPPTNDIRVPLHHNQEDLFSIANMMMNRGRITEAATDR---FGGINPGSLVAPNVSTRAGFSTPPMAVSNAPTSTTREGFSQGFVEEGRGMAMVAGSSAMGVGMADPRGFPPAHNSTTPFPSSENSFNILPYLASMLPDGASICCPRLPFLAAGFDPYGRPIYEPNGVALAPVTPQFNPFEFWPPKSSVLNLVQVWQAHVRATSPSTLTMEWSSRLETAFYLPQKALEYTITIFHGPIDYVFFYMLNFNNLDFFEHLTKQNLCARVTLPTQILIISPTENQHYYVGTVFPRVSVIFFIESL 489
BLAST of PvulFLAVERTChr04.973 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86VYH7|A0AA86VYH7_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS14990 PE=4 SV=1) HSP 1 Score: 340.117 bits (871), Expect = 1.478e-106 Identity = 213/490 (43.47%), Postives = 272/490 (55.51%), Query Frame = 0 Query: 34 RTFFDNSIEEEASGAACELGLLMYNSNYNNIGLDLQYIHWTRDVNYFLDILSCLTFNGDNLNRHVMVEGLAEALVMFPRPSDVMTTQEYYNGERHCVLIAARDPFPRRMVVSVPEITKEGIIGTQSHHVNADFYEVAEMFGPLAVSLSIISPMLHPIFGVIFNMGNDGSVLSTTPISNTGMDQFTVLLSRKFKEAHDAFRGKRKMDQRTEEWLE--------------------SMKRINV----------PRFPMNVAKYLQGEGSSK-----ERDRKVVLG-----------GI---------PENWSMFPRSTGSSFNIQPY-SSPMLPSATNGGGGHQHSAFQGPRFGPLGRSALGSSTWAPPPAPPA--TPQLNLPNALPFSP-FTNFQHYSLAWEGYLVGNIN-----------NIASSFHIAKALKRASSPATLAKDWSRRLEILLYLSEKAVNHTIRNYSEPIDFVFITIMQFNNLDLYEYL 453 +TFFD+S + A+ CE+ L+MYN++ + G D+Q IHWTR+VN L ILS L FNG+N ++ MV+GLAEAL MFPRPS++MTT+EYYNG RHC+L+AAR+P PRRM VSVPE IG + +NADF+EVAEMFGPLA SLSIISP+ HPIF VI+NMG++GS L TTPI N + QF VLL+R F EAH A RGK MD T + + S+ NV P F N EGSSK ER + V+ G G+ P ++++F S G+SFN QPY S PMLPS T + G G P PPA PQ N + P P TN Q LAWEG L+G + N++ I +A +R +SP TL +WS RLEI YL +KA+N+TI P+D+VF ++ FNNLDL +L Sbjct: 85 QTFFDHSRNQGANNPECEVALIMYNAS-SYPGFDVQCIHWTREVNQVLAILSSLVFNGNNEKQYTMVQGLAEALAMFPRPSNIMTTEEYYNGTRHCILVAAREPTPRRMPVSVPEFQGR-TIGARVVTLNADFFEVAEMFGPLATSLSIISPVQHPIFEVIYNMGDNGSPLETTPIPNIRIGQFHVLLARNFTEAHVALRGKGIMDPPTVDIRDFANDNQGSLPLSLSETVNPLSLVVPNVSTSAVGMSTPPVFFSNAPTSTAREGSSKGLVQEERGKGVLAGSSQTCSMTTTFGVGMADPRVSPPADYAIFLHSGGNSFNAQPYFSPPMLPSVTTSRSSSSSIRRLRLPYHAAGIDYYGRPMLQPTVVPPAPTIPQFNPTDFWPLQPSATNSQDLVLAWEGTLIGKTHRQRKNIQRGTLNVSPFSAIKQAHRRVTSPPTLVNEWSSRLEIDFYLPQKALNYTITISRGPVDYVFFHMLHFNNLDLVLHL 572 HSP 2 Score: 84.7297 bits (208), Expect = 1.740e-13 Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 0 Query: 391 IAKALKRASSPATLAKDWSRRLEILLYLSEKAVNHTIRNYSEPIDFVFITIMQFNNLDLYEYLKNGNLCA 460 + +AL+R +SP+TL +WS RLEI YL +K +N+ I Y PID+VF+ I FNNLDLYE+LKN NL A Sbjct: 1 MKQALRRVTSPSTLTSEWSSRLEISFYLPQKTLNYMITIYRGPIDYVFLDISYFNNLDLYEHLKNKNLGA 70
BLAST of PvulFLAVERTChr04.973 vs. ExPASy Swiss-Prot (2024)
Match: sp|A0A3Q7JC00|MED25_SOLLC (Mediator of RNA polymerase II transcription subunit 25 OS=Solanum lycopersicum OX=4081 GN=MED25 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 6.790e-34 Identity = 81/230 (35.22%), Postives = 124/230 (53.91%), Query Frame = 0 Query: 7 LNIVVDANSALAPHWPKIVSEYLEKIVRTFFD-NSIEEEASGAACELGLLMYNSNYNNIGLDLQYIHWTRDVNYFLDILSCLTFNGDNLNRHVMVEGLAEALVMFPRPSDVMTTQEYYNGERHCVLIAARDPFPRRMVVSVPEITK---EGIIGTQSHHVNADFYEVAEMFGPLAVSLSIISPMLHPIFGVIFNMGNDGSVLSTTPISNTGMDQFTVLLSRKFKEAHDAF 232 L + V+ + L P+W IVS+YL+KI+R FF +S +++S A E+ ++M+N++ +Q WT+D++ FL LS + F+G N + EGLAEALVMF P+ TQ+ G++HC+LI+ +P+P V P++ K I Q+ AD VA+ F ++SLS+I P P I++ G + PI F VL+S F EA AF Sbjct: 5 LIVAVEGTAVLGPYWKIIVSDYLDKIIRCFFGVDSTSQKSSAADVEVSMVMFNTHGPYSACLVQRSGWTKDMDTFLQWLSAIPFSGGGFNDAAVAEGLAEALVMFSVPNG-NQTQQKMEGKKHCILISGSNPYPLPTPVYRPQMQKLEQNENIEAQTDSRLADAETVAKTFPQCSISLSVICPKKLPKLRAIYDAGKHNPRAADPPIDTAKNPNFLVLISENFIEARAAF 233
BLAST of PvulFLAVERTChr04.973 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q7XYY2|MED25_ARATH (Mediator of RNA polymerase II transcription subunit 25 OS=Arabidopsis thaliana OX=3702 GN=MED25 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.099e-27 Identity = 84/264 (31.82%), Postives = 125/264 (47.35%), Query Frame = 0 Query: 5 KWLNIVVDANSALAPHWPKIVSEYLEKIVRTFFDNSIEEEASG-AACELGLLMYNSNYNNIGLDLQYIHWTRDVNYFLDILSCLTFNGDNLNRHVMVEGLAEALVMFPRPSDVMTTQEYYNGERHCVLIAARDPF--------PRRMVVSVPEITKEGIIGTQSHHVNADFYEVAEMFGPLAVSLSIISPMLHPIFGVIFNMGNDGSVLSTTPISNTGMDQFTVLLSRKFKEAHDAFRGKRKMDQRTEEWLESMKRINVPRFPM 259 K L +V + +AL P+W IVS+YLEKI+R+F + + E + + EL L+++NS+ + +Q WTRDV+ FL LS + F G N EGLAEAL+MF PS Q + +RHC+LI A +P PR V E + G Q+ +D VA F +VSLS++ P P ++N G + I + VL+S F EA A +T+ ++ + P P+ Sbjct: 6 KQLIVVAEGTAALGPYWQTIVSDYLEKIIRSFCGSELNGERNPVSTVELSLVIFNSHGSYCACLVQRSGWTRDVDIFLHWLSSIQFGGGGFNEVATAEGLAEALMMFSPPSG--QAQPSNDLKRHCILITASNPHILPTPVYRPRLQNV---ERNENG--DAQAESRLSDAETVASYFAKCSVSLSVVCPKQLPTIRALYNAGKPNQQSADLSIDTAKNTFYLVLISENFVEACAALSHSATNLPQTQSPVKVDRATVAPSIPV 262
BLAST of PvulFLAVERTChr04.973 vs. Araport11
Match: | (Symbols: MED25, PFT1 | mediator 25, PHYTOCHROME AND FLOWERING TIME 1 | chr1:8969392-8974446 REVERSE LENGTH=836) HSP 1 Score: 120.939 bits (302), Expect = 1.112e-28 Identity = 84/264 (31.82%), Postives = 125/264 (47.35%), Query Frame = 0 Query: 5 KWLNIVVDANSALAPHWPKIVSEYLEKIVRTFFDNSIEEEASG-AACELGLLMYNSNYNNIGLDLQYIHWTRDVNYFLDILSCLTFNGDNLNRHVMVEGLAEALVMFPRPSDVMTTQEYYNGERHCVLIAARDPF--------PRRMVVSVPEITKEGIIGTQSHHVNADFYEVAEMFGPLAVSLSIISPMLHPIFGVIFNMGNDGSVLSTTPISNTGMDQFTVLLSRKFKEAHDAFRGKRKMDQRTEEWLESMKRINVPRFPM 259 K L +V + +AL P+W IVS+YLEKI+R+F + + E + + EL L+++NS+ + +Q WTRDV+ FL LS + F G N EGLAEAL+MF PS Q + +RHC+LI A +P PR V E + G Q+ +D VA F +VSLS++ P P ++N G + I + VL+S F EA A +T+ ++ + P P+ Sbjct: 6 KQLIVVAEGTAALGPYWQTIVSDYLEKIIRSFCGSELNGERNPVSTVELSLVIFNSHGSYCACLVQRSGWTRDVDIFLHWLSSIQFGGGGFNEVATAEGLAEALMMFSPPSG--QAQPSNDLKRHCILITASNPHILPTPVYRPRLQNV---ERNENG--DAQAESRLSDAETVASYFAKCSVSLSVVCPKQLPTIRALYNAGKPNQQSADLSIDTAKNTFYLVLISENFVEACAALSHSATNLPQTQSPVKVDRATVAPSIPV 262 The following BLAST results are available for this feature:
BLAST of PvulFLAVERTChr04.973 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of PvulFLAVERTChr04.973 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot) Total hits: 2
BLAST of PvulFLAVERTChr04.973 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11) Total hits: 1
InterPro
Analysis Name: Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL
Date Performed: 2024-08-19
Analysis Name: InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0 Date Performed: 2024-08-19
Sequences
The
following sequences are available for this feature:
mRNA sequence >drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr04.973 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr04.973; Name=PvulFLAVERTChr04.973; organism=Phaseolus vulgaris; type=mRNA; length=1886bpback to top protein sequence of drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr04.973 >drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr04.973 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr04.973; Name=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr04.973; organism=Phaseolus vulgaris; type=polypeptide; length=495bpback to top mRNA from alignment at Chr04:52443270..52451758+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr04.973 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr04.973; Name=PvulFLAVERTChr04.973; organism=Phaseolus vulgaris; type=mRNA; length=8489bp; location=Sequence derived from: Chr04:52443270..52451758+ (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr04:52443270..52451758+ >drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr04.973 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr04.973; Name=PvulFLAVERTChr04.973; organism=Phaseolus vulgaris; type=CDS; length=1488bp; location=Sequence derived from: Chr04:52443270..52451758+ (Phaseolus vulgarisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|