PvulFLAVERTChr05.1001215

Transcript Overview
NamePvulFLAVERTChr05.1001215
Unique NamedrPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1001215
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Sequence length322
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr05chromosomeChr05:45354791..45355517 -Phaseolus vulgaris cv. Flavert genome v1.0n/a
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PvulFLAVERTChr05.1001215drPhaVulg.Flavert.1.0gene:PvulFLAVERTChr05.1001215Phaseolus vulgarisgene


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr05.1001215.0drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr05.1001215.0Phaseolus vulgaristhree_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr05.1001215.3drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr05.1001215.3Phaseolus vulgarisexon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr05.1001215.2drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr05.1001215.2Phaseolus vulgarisexon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr05.1001215.1drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr05.1001215.1Phaseolus vulgarisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr05.1001215.3drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr05.1001215.3Phaseolus vulgarisCDS
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr05.1001215.2drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr05.1001215.2Phaseolus vulgarisCDS
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr05.1001215.1drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr05.1001215.1Phaseolus vulgarisCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr05.1001215.6drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr05.1001215.6Phaseolus vulgarisfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1001215drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1001215Phaseolus vulgarispolypeptide
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1001215drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1001215-proteinPhaseolus vulgarispolypeptide


Homology
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. ExPASy TrEMBL (2024)
Match: tr|V7C189|V7C189_PHAVU (ALA-interacting subunit OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G170000g PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.094e-38
Identity = 66/71 (92.96%), Postives = 68/71 (95.77%), Query Frame = 0 
Query:    1 MDIPDENDATTSNKTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESVTSRII 71
            MDIPDENDATTSNKTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESV   ++
Sbjct:    1 MDIPDENDATTSNKTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESVEEVVL 71
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. ExPASy TrEMBL (2024)
Match: tr|V7BXC5|V7BXC5_PHAVU (ALA-interacting subunit OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G170000g PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.050e-37
Identity = 66/71 (92.96%), Postives = 68/71 (95.77%), Query Frame = 0 
Query:    1 MDIPDENDATTSNKTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESVTSRII 71
            MDIPDENDATTSNKTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESV   ++
Sbjct:    1 MDIPDENDATTSNKTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESVEEVVL 71
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SFK5|A0A0S3SFK5_PHAAN (ALA-interacting subunit OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G022800 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.019e-29
Identity = 55/69 (79.71%), Postives = 61/69 (88.41%), Query Frame = 0 
Query:    3 IPDENDATTSNKTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESVTSRII 71
            + DE+DATTS+ +SKKPIYTEFSQQ+LP WKPILTPGWVIAT F VGVIFIPIGLATVFSSESV   +I
Sbjct:    1 MSDEDDATTSHSSSKKPIYTEFSQQELPEWKPILTPGWVIATLFAVGVIFIPIGLATVFSSESVEEIVI 69
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3U3Z7|A0A1S3U3Z7_VIGRR (ALA-interacting subunit OS=Vigna radiata var. radiata OX=3916 GN=LOC106761697 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.346e-28
Identity = 54/69 (78.26%), Postives = 60/69 (86.96%), Query Frame = 0 
Query:    3 IPDENDATTSNKTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESVTSRII 71
            + DEND TTS+++SKKPIYTEFSQQ+LP WKPILTPGWVI T F VGVIFIPIGLATVFSSESV   +I
Sbjct:    1 MADENDDTTSHRSSKKPIYTEFSQQELPEWKPILTPGWVITTLFAVGVIFIPIGLATVFSSESVEEIVI 69
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2NNX1|A0A0B2NNX1_GLYSO (ALA-interacting subunit OS=Glycine soja OX=3848 GN=glysoja_030788 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.006e-27
Identity = 53/71 (74.65%), Postives = 64/71 (90.14%), Query Frame = 0 
Query:    1 MDIP-DENDATTSNKTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESVTSRI 70
            MD+P D++DA TS +TSKKPIY++FSQQ+LPAWKPILTPGWVIATF V+GVIFIPIGLA++FSSESV   +
Sbjct:    1 MDMPVDKDDAPTSKRTSKKPIYSKFSQQELPAWKPILTPGWVIATFSVIGVIFIPIGLASLFSSESVEEAV 71
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. ExPASy TrEMBL (2024)
Match: tr|I1MCS8|I1MCS8_SOYBN (ALA-interacting subunit OS=Glycine max OX=3847 GN=GLYMA_15G017800 PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 2.006e-27
Identity = 53/71 (74.65%), Postives = 64/71 (90.14%), Query Frame = 0 
Query:    1 MDIP-DENDATTSNKTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESVTSRI 70
            MD+P D++DA TS +TSKKPIY++FSQQ+LPAWKPILTPGWVIATF V+GVIFIPIGLA++FSSESV   +
Sbjct:    1 MDMPVDKDDAPTSKRTSKKPIYSKFSQQELPAWKPILTPGWVIATFSVIGVIFIPIGLASLFSSESVEEAV 71
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445GMN4|A0A445GMN4_GLYSO (ALA-interacting subunit OS=Glycine soja OX=3848 GN=D0Y65_039696 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.786e-27
Identity = 53/71 (74.65%), Postives = 64/71 (90.14%), Query Frame = 0 
Query:    1 MDIP-DENDATTSNKTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESVTSRI 70
            MD+P D++DA TS +TSKKPIY++FSQQ+LPAWKPILTPGWVIATF V+GVIFIPIGLA++FSSESV   +
Sbjct:   48 MDMPVDKDDAPTSKRTSKKPIYSKFSQQELPAWKPILTPGWVIATFSVIGVIFIPIGLASLFSSESVEEAV 118
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151SHB7|A0A151SHB7_CAJCA (ALA-interacting subunit OS=Cajanus cajan OX=3821 GN=KK1_000419 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 4.148e-27
Identity = 52/70 (74.29%), Postives = 59/70 (84.29%), Query Frame = 0 
Query:    1 MDIPDENDATTSNKTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESVTSRI 70
            MDI DE  A +S K SKKPIYT+FSQQDLPAWKPILTPGWVIATF VVG+++IPIGL T+F+SESV   I
Sbjct:    1 MDIKDEESAPSSKKASKKPIYTQFSQQDLPAWKPILTPGWVIATFSVVGILYIPIGLLTLFASESVEEAI 70
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6N6S8|A0A4D6N6S8_VIGUN (ALA-interacting subunit OS=Vigna unguiculata OX=3917 GN=DEO72_LG10g197 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.185e-25
Identity = 52/76 (68.42%), Postives = 62/76 (81.58%), Query Frame = 0 
Query:    3 IPDENDATTSNKTSKKPIY-------TEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESVTSRII 71
            +P+E+DAT S+++SKKPI        TEFSQQ+LPAWKPILTPGWVIAT F VGV+FIPIGLAT+FSSESV   +I
Sbjct:    1 MPNEDDATPSHRSSKKPICVFLRAFDTEFSQQELPAWKPILTPGWVIATLFAVGVLFIPIGLATMFSSESVEEVVI 76
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371HFK9|A0A371HFK9_MUCPR (ALA-interacting subunit 1 (Fragment) OS=Mucuna pruriens OX=157652 GN=ALIS1 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.103e-24
Identity = 50/66 (75.76%), Postives = 55/66 (83.33%), Query Frame = 0 
Query:    5 DENDATTSNKTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESVTSRI 70
            D   A TS KTSKKPIYT+FSQQ++PAWKPILTPGWVIATF  +G+IFIPIGLAT FSSESV   I
Sbjct:    6 DGQSAPTSKKTSKKPIYTKFSQQEVPAWKPILTPGWVIATFSAIGIIFIPIGLATFFSSESVEEAI 71
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SLK2|ALIS3_ARATH (ALA-interacting subunit 3 OS=Arabidopsis thaliana OX=3702 GN=ALIS3 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 8.225e-18
Identity = 33/53 (62.26%), Postives = 46/53 (86.79%), Query Frame = 0 
Query:   14 KTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESV 66
            K SK+P Y++F+QQ+LPA KPILTPGWVI+TF +V VIFIP+G+ ++F+S+ V
Sbjct:   23 KNSKRPKYSKFTQQELPACKPILTPGWVISTFLIVSVIFIPLGVISLFASQDV 75
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8L8W0|ALIS5_ARATH (ALA-interacting subunit 5 OS=Arabidopsis thaliana OX=3702 GN=ALIS5 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.246e-17
Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = 0 
Query:   14 KTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESV 66
            KTSK+P Y+ F+QQ+LPA KPILTP WVI TF V GV+FIP+G+  +F+S+ V
Sbjct:   23 KTSKRPKYSRFTQQELPACKPILTPRWVILTFLVAGVVFIPLGVICLFASQGV 75
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LTW0|ALIS1_ARATH (ALA-interacting subunit 1 OS=Arabidopsis thaliana OX=3702 GN=ALIS1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.246e-17
Identity = 31/53 (58.49%), Postives = 46/53 (86.79%), Query Frame = 0 
Query:   14 KTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESV 66
            + SK+P Y++F+QQ+LPA KPILTPGWVI+TF ++ VIFIP+G+ ++F+S+ V
Sbjct:   24 RNSKRPKYSKFTQQELPACKPILTPGWVISTFLIISVIFIPLGVISLFASQDV 76
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SA35|ALIS4_ARATH (Putative ALA-interacting subunit 4 OS=Arabidopsis thaliana OX=3702 GN=ALIS4 PE=2 SV=2)

HSP 1 Score: 63.929 bits (154), Expect = 1.229e-12
Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 0 
Query:   22 TEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESV 66
            + F+QQ+LPA KPILTP WVI TF V GV+FIP+G+  +F+S+ V
Sbjct:   17 SRFTQQELPACKPILTPKWVILTFLVSGVVFIPLGVICLFASQGV 61
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q67YS6|ALIS2_ARATH (Putative ALA-interacting subunit 2 OS=Arabidopsis thaliana OX=3702 GN=ALIS2 PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 5.051e-9
Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 0 
Query:    4 PDENDATTSNKTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSS 63
            PD++    S ++  K +Y +F QQ LPA KP+LTP  VI  F ++G +FIPIGL T+ +S
Sbjct:   12 PDQSSFLRSRRS--KALY-QFKQQKLPACKPVLTPISVITVFMLMGFVFIPIGLITLRAS 68
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. ExPASy Swiss-Prot (2024)
Match: sp|H2L0H3|CHAT1_CAEEL (CDC50 family protein chat-1 OS=Caenorhabditis elegans OX=6239 GN=chat-1 PE=2 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 2.124e-8
Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 0 
Query:    8 DATTSNKTSK-KPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESVT 67
            D   + K  K +P  +   QQ LPAW+PILT   VI T FV+G IF+PIG+    +S++V+
Sbjct:   19 DGVQTEKVLKNRPKASALRQQKLPAWQPILTATTVIPTVFVIGAIFLPIGVFLFIASDAVS 79
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. ExPASy Swiss-Prot (2024)
Match: sp|P25656|CDC50_YEAST (Phospholipid-transporting ATPase accessory subunit CDC50 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CDC50 PE=1 SV=1)

HSP 1 Score: 50.8322 bits (120), Expect = 5.571e-8
Identity = 26/57 (45.61%), Postives = 32/57 (56.14%), Query Frame = 0 
Query:   10 TTSNKTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESV 66
            T    TSKKP  T F QQ L AW+PIL+P  V+     V  IF PIG+  + S+  V
Sbjct:   14 TKEGPTSKKPPNTAFRQQRLKAWQPILSPQSVLPLLIFVACIFTPIGIGLIVSATKV 70
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. ExPASy Swiss-Prot (2024)
Match: sp|P53740|YN8S_YEAST (Phospholipid-transporting ATPase accessory subunit CRF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YNR048W PE=1 SV=1)

HSP 1 Score: 50.8322 bits (120), Expect = 5.969e-8
Identity = 23/58 (39.66%), Postives = 35/58 (60.34%), Query Frame = 0 
Query:   14 KTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESVTSRII 71
            + S+KP  T F QQ L AW+PIL+P  V+    ++  +F PIG+  V S+ SV   ++
Sbjct:   20 QKSRKPANTSFRQQRLKAWQPILSPQSVLPLLILMACVFAPIGIGLVVSTISVQRLVV 77
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8BHG3|CC50B_MOUSE (Cell cycle control protein 50B OS=Mus musculus OX=10090 GN=Tmem30b PE=2 SV=1)

HSP 1 Score: 50.0618 bits (118), Expect = 8.570e-8
Identity = 21/57 (36.84%), Postives = 35/57 (61.40%), Query Frame = 0 
Query:   10 TTSNKTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESV 66
            + + + + +P  T F+QQ LPAW+P+L+ G  +  FF  G+ FI +GL   +SS  +
Sbjct:    4 SATARGAHQPDNTAFTQQRLPAWQPLLSAGIALPLFFCAGLAFIGLGLGLFYSSNGI 60
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q1MTQ5|MUG89_SCHPO (Phospholipid-transporting ATPase accessory subunit mug89 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mug89 PE=2 SV=1)

HSP 1 Score: 49.6766 bits (117), Expect = 1.185e-7
Identity = 21/56 (37.50%), Postives = 36/56 (64.29%), Query Frame = 0 
Query:   16 SKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESVTSRII 71
            ++ P  T F QQ + +W+P+LTP  V+  FFV+G+IF P+G   +++S  V   ++
Sbjct:   21 TRAPPNTSFRQQRIKSWQPLLTPKIVLPLFFVLGIIFGPLGGGLLYASSIVQELVV 76
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:20275732-20277793 REVERSE LENGTH=349)

HSP 1 Score: 78.1814 bits (191), Expect = 8.367e-19
Identity = 33/53 (62.26%), Postives = 46/53 (86.79%), Query Frame = 0 
Query:   14 KTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESV 66
            K SK+P Y++F+QQ+LPA KPILTPGWVI+TF +V VIFIP+G+ ++F+S+ V
Sbjct:   23 KNSKRPKYSKFTQQELPACKPILTPGWVISTFLIVSVIFIPLGVISLFASQDV 75
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:5593493-5595793 REVERSE LENGTH=350)

HSP 1 Score: 77.0258 bits (188), Expect = 2.073e-18
Identity = 33/59 (55.93%), Postives = 46/59 (77.97%), Query Frame = 0 
Query:    8 DATTSNKTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESV 66
            +A+ +  TSK+P Y+ F+QQ+LPA KPILTP WVI TF V GV+FIP+G+  +F+S+ V
Sbjct:   17 EASAAKNTSKRPKYSRFTQQELPACKPILTPKWVILTFLVSGVVFIPLGVICLFASQGV 75
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. Araport11
Match: | (Symbols: ALIS1 | ALA-interacting subunit 1 | chr3:4049739-4051561 FORWARD LENGTH=350)

HSP 1 Score: 76.6406 bits (187), Expect = 3.299e-18
Identity = 31/53 (58.49%), Postives = 46/53 (86.79%), Query Frame = 0 
Query:   14 KTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESV 66
            + SK+P Y++F+QQ+LPA KPILTPGWVI+TF ++ VIFIP+G+ ++F+S+ V
Sbjct:   24 RNSKRPKYSKFTQQELPACKPILTPGWVISTFLIISVIFIPLGVISLFASQDV 76
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. Araport11
Match: | (Symbols: ALIS5 | ALA-interacting subunit 5 | chr1:29887831-29889904 FORWARD LENGTH=350)

HSP 1 Score: 76.6406 bits (187), Expect = 3.299e-18
Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = 0 
Query:   14 KTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESV 66
            KTSK+P Y+ F+QQ+LPA KPILTP WVI TF V GV+FIP+G+  +F+S+ V
Sbjct:   23 KTSKRPKYSRFTQQELPACKPILTPRWVILTFLVAGVVFIPLGVICLFASQGV 75
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:5594043-5595179 REVERSE LENGTH=238)

HSP 1 Score: 63.5438 bits (153), Expect = 9.236e-14
Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 0 
Query:   22 TEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESV 66
            + F+QQ+LPA KPILTP WVI TF V GV+FIP+G+  +F+S+ V
Sbjct:   17 SRFTQQELPACKPILTPKWVILTFLVSGVVFIPLGVICLFASQGV 61
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:5594043-5595179 REVERSE LENGTH=238)

HSP 1 Score: 63.5438 bits (153), Expect = 9.236e-14
Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 0 
Query:   22 TEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESV 66
            + F+QQ+LPA KPILTP WVI TF V GV+FIP+G+  +F+S+ V
Sbjct:   17 SRFTQQELPACKPILTPKWVILTFLVSGVVFIPLGVICLFASQGV 61
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:5593605-5595179 REVERSE LENGTH=339)

HSP 1 Score: 63.929 bits (154), Expect = 1.244e-13
Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 0 
Query:   22 TEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESV 66
            + F+QQ+LPA KPILTP WVI TF V GV+FIP+G+  +F+S+ V
Sbjct:   17 SRFTQQELPACKPILTPKWVILTFLVSGVVFIPLGVICLFASQGV 61
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:5593493-5595179 REVERSE LENGTH=336)

HSP 1 Score: 63.929 bits (154), Expect = 1.245e-13
Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 0 
Query:   22 TEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSSESV 66
            + F+QQ+LPA KPILTP WVI TF V GV+FIP+G+  +F+S+ V
Sbjct:   17 SRFTQQELPACKPILTPKWVILTFLVSGVVFIPLGVICLFASQGV 61
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:18708847-18710424 REVERSE LENGTH=329)

HSP 1 Score: 53.9138 bits (128), Expect = 3.830e-10
Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 0 
Query:    4 PDENDATTSNKTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSS 63
            PD++    S ++  K +Y +F QQ LPA KP+LTP  VI  F ++G +FIPIGL T+ +S
Sbjct:   12 PDQSSFLRSRRS--KALY-QFKQQKLPACKPVLTPISVITVFMLMGFVFIPIGLITLRAS 68
[Close]
BLAST of PvulFLAVERTChr05.1001215 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:18708735-18710424 REVERSE LENGTH=343)

HSP 1 Score: 53.5286 bits (127), Expect = 5.109e-10
Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 0 
Query:    4 PDENDATTSNKTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGVIFIPIGLATVFSS 63
            PD++    S ++  K +Y +F QQ LPA KP+LTP  VI  F ++G +FIPIGL T+ +S
Sbjct:   12 PDQSSFLRSRRS--KALY-QFKQQKLPACKPVLTPISVITVFMLMGFVFIPIGLITLRAS 68
The following BLAST results are available for this feature:
BLAST of PvulFLAVERTChr05.1001215 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|V7C189|V7C189_PHAVU1.094e-3892.96ALA-interacting subunit OS=Phaseolus vulgaris OX=3... [more]
tr|V7BXC5|V7BXC5_PHAVU2.050e-3792.96ALA-interacting subunit OS=Phaseolus vulgaris OX=3... [more]
tr|A0A0S3SFK5|A0A0S3SFK5_PHAAN8.019e-2979.71ALA-interacting subunit OS=Vigna angularis var. an... [more]
tr|A0A1S3U3Z7|A0A1S3U3Z7_VIGRR1.346e-2878.26ALA-interacting subunit OS=Vigna radiata var. radi... [more]
tr|A0A0B2NNX1|A0A0B2NNX1_GLYSO2.006e-2774.65ALA-interacting subunit OS=Glycine soja OX=3848 GN... [more]
tr|I1MCS8|I1MCS8_SOYBN2.006e-2774.65ALA-interacting subunit OS=Glycine max OX=3847 GN=... [more]
tr|A0A445GMN4|A0A445GMN4_GLYSO3.786e-2774.65ALA-interacting subunit OS=Glycine soja OX=3848 GN... [more]
tr|A0A151SHB7|A0A151SHB7_CAJCA4.148e-2774.29ALA-interacting subunit OS=Cajanus cajan OX=3821 G... [more]
tr|A0A4D6N6S8|A0A4D6N6S8_VIGUN7.185e-2568.42ALA-interacting subunit OS=Vigna unguiculata OX=39... [more]
tr|A0A371HFK9|A0A371HFK9_MUCPR7.103e-2475.76ALA-interacting subunit 1 (Fragment) OS=Mucuna pru... [more]
back to top
BLAST of PvulFLAVERTChr05.1001215 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q9SLK2|ALIS3_ARATH8.225e-1862.26ALA-interacting subunit 3 OS=Arabidopsis thaliana ... [more]
sp|Q8L8W0|ALIS5_ARATH3.246e-1762.26ALA-interacting subunit 5 OS=Arabidopsis thaliana ... [more]
sp|Q9LTW0|ALIS1_ARATH3.246e-1758.49ALA-interacting subunit 1 OS=Arabidopsis thaliana ... [more]
sp|Q9SA35|ALIS4_ARATH1.229e-1260.00Putative ALA-interacting subunit 4 OS=Arabidopsis ... [more]
sp|Q67YS6|ALIS2_ARATH5.051e-946.67Putative ALA-interacting subunit 2 OS=Arabidopsis ... [more]
sp|H2L0H3|CHAT1_CAEEL2.124e-844.26CDC50 family protein chat-1 OS=Caenorhabditis eleg... [more]
sp|P25656|CDC50_YEAST5.571e-845.61Phospholipid-transporting ATPase accessory subunit... [more]
sp|P53740|YN8S_YEAST5.969e-839.66Phospholipid-transporting ATPase accessory subunit... [more]
sp|Q8BHG3|CC50B_MOUSE8.570e-836.84Cell cycle control protein 50B OS=Mus musculus OX=... [more]
sp|Q1MTQ5|MUG89_SCHPO1.185e-737.50Phospholipid-transporting ATPase accessory subunit... [more]
back to top
BLAST of PvulFLAVERTChr05.1001215 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
|8.367e-1962.26Symbols: no symbol available | no full name availa... [more]
|2.073e-1855.93Symbols: no symbol available | no full name availa... [more]
|3.299e-1858.49Symbols: ALIS1 | ALA-interacting subunit 1 | chr3:... [more]
|3.299e-1862.26Symbols: ALIS5 | ALA-interacting subunit 5 | chr1:... [more]
|9.236e-1460.00Symbols: no symbol available | no full name availa... [more]
|9.236e-1460.00Symbols: no symbol available | no full name availa... [more]
|1.244e-1360.00Symbols: no symbol available | no full name availa... [more]
|1.245e-1360.00Symbols: no symbol available | no full name availa... [more]
|3.830e-1046.67Symbols: no symbol available | no full name availa... [more]
|5.109e-1046.67Symbols: no symbol available | no full name availa... [more]
back to top
InterPro
Analysis Name: Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005045CDC50/LEM3 familyPANTHERPTHR10926CELL CYCLE CONTROL PROTEIN 50coord: 10..68

Analysis Name: InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005045CDC50/LEM3 familyPANTHERPTHR10926CELL CYCLE CONTROL PROTEIN 50coord: 10..68

Sequences
The following sequences are available for this feature:

mRNA sequence

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1001215 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1001215; Name=PvulFLAVERTChr05.1001215; organism=Phaseolus vulgaris; type=mRNA; length=322bp
TTCTGTGGTCCAACCACAACTACATTGCAGTTACTCTCTCTCTGTAACTT
TTTTTCCATCTCGTCTCAACAACCATGGATATACCCGATGAAAACGACGC
TACCACTTCCAACAAAACTTCCAAAAAACCCATATaTACAGAATTCTCAC
AACAAGATCTTCCTGCATGGAAACCAATTCTAACACCGGGATGGGTTATT
GCCACATTTTTTGTCGTTGGAGTCATATTCATCCCCATTGGTCTTGCTAC
TGTGTTTTCATCAGAGAGTGTAACATCTCGTATAATATAACATACTTACA
TAGTGTGAAATGGATTTGGTGC
back to top

protein sequence of drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1001215

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1001215 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1001215; Name=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1001215; organism=Phaseolus vulgaris; type=polypeptide; length=71bp
MDIPDENDATTSNKTSKKPIYTEFSQQDLPAWKPILTPGWVIATFFVVGV
IFIPIGLATVFSSESVTSRII
back to top

mRNA from alignment at Chr05:45354791..45355517-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1001215 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1001215; Name=PvulFLAVERTChr05.1001215; organism=Phaseolus vulgaris; type=mRNA; length=727bp; location=Sequence derived from: Chr05:45354791..45355517- (Phaseolus vulgaris
TTCTGTGGTCCAACCACAACTACATTGCAGTTACTCTCTCTCTGTAACTT
TTTTTCCATCTCGTCTCAACAACCATGGATATACCCGATGAAAACGACGC
TACCACTTCCAACAAAACTTCCAAAAAACCCATATGTGTGTTCTTCACTT
GCATTTGCTTATAATTAATTCTCTTTTAATTTGTTTTTATTTTGTGTTAA
CCAAGTCTATGTAAATTTCATATGCAGCTTGAAGCAATGGTACATTCAAA
AAATAAAAAAGTAACAATTGGCCAAACCTTTGTTATGATGCTTTGTTTGG
AATTAGAATTAAACATTTTTTTTTCAACGCTTTGTTTAGTTATTTGTACC
CAATTGCTCAAGTGCTAACTTTGCACCAAAATCTGGCAATTTCATGTAGA
AATTTGTGTTTGAAGTAATTGTTGCTAATAATCTTTATTTTGTTTTCTTG
TAGATACAGAATTCTCACAACAAGATCTTCCTGCATGGAAACCAATTCTA
ACACCGGGATGGGTACGGCGTTCAACGCAAACTTGCCCAGTTCTGATTTG
CAAATGTTCTTCTAACAATTGATTGGCGATTTTATATTTGTTTTCTCAGG
TTATTGCCACATTTTTTGTCGTTGGAGTCATATTCATCCCCATTGGTCTT
GCTACTGTGTTTTCATCAGAGAGTGTAACATCTCGTATAATATAACATAC
TTACATAGTGTGAAATGGATTTGGTGC
back to top

Coding sequence (CDS) from alignment at Chr05:45354791..45355517-

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1001215 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1001215; Name=PvulFLAVERTChr05.1001215; organism=Phaseolus vulgaris; type=CDS; length=216bp; location=Sequence derived from: Chr05:45354791..45355517- (Phaseolus vulgaris
ATGGATATACCCGATGAAAACGACGCTACCACTTCCAACAAAACTTCCAA
AAAACCCATATATACAGAATTCTCACAACAAGATCTTCCTGCATGGAAAC
CAATTCTAACACCGGGATGGGTTATTGCCACATTTTTTGTCGTTGGAGTC
ATATTCATCCCCATTGGTCTTGCTACTGTGTTTTCATCAGAGAGTGTAAC
ATCTCGTATAATATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR005045CDC50/LEM3_fam
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane