PvulFLAVERTChr06.1001906

Transcript Overview
NamePvulFLAVERTChr06.1001906
Unique NamedrPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr06.1001906
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Sequence length345
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr06chromosomeChr06:33700582..33700926 -Phaseolus vulgaris cv. Flavert genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjpvfL129Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvfL300Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvfL690Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvfL691Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvfL067Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carpvfL068Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carpvfL071Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
pspvfL079Pisum sativum Cameor genome v1aPisum sativum
pspvfL086Pisum sativum Cameor genome v1aPisum sativum
ccapvfL134Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvfL135Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pspvfL506Pisum sativum Cameor genome v1aPisum sativum
ccapvfL494Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvfL495Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carpvfL625Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
pspvfL875Pisum sativum Cameor genome v1aPisum sativum
pspvfL877Pisum sativum Cameor genome v1aPisum sativum
ccapvfL801Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvfL805Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvfpvfL192Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfpvfL290Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfL240Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvfvrvR439Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvfvfhR510Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvfhR520Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvfhR527Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvrvR475Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvfvfhR556Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvfhR558Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvssR547Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvfvssR552Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvfvuR449Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvfvssR553Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvpvfL469Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvfL471Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvfvssR563Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvfvuR460Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvfvuR464Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvpvfL501Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvfvssR587Vicia sativa cv. Studenica genome v1.0Vicia sativa

Orthologs
Gene/TranscriptAssemblySpecies
Vigun06g202800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cc_v2.0_19911.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Va09G060610.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Phvul.006G186900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PvulFLAVERTChr06.1001906drPhaVulg.Flavert.1.0gene:PvulFLAVERTChr06.1001906Phaseolus vulgarisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr06.1001906.1drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr06.1001906.1Phaseolus vulgarisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr06.1001906.1drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr06.1001906.1Phaseolus vulgarisCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr06.1001906drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr06.1001906Phaseolus vulgarispolypeptide
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr06.1001906drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr06.1001906-proteinPhaseolus vulgarispolypeptide


Homology
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. ExPASy TrEMBL (2024)
Match: tr|V7BT14|V7BT14_PHAVU (Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G186900g PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 2.640e-67
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 
Query:   15 MMLVGSEVHGITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAVIKAGIKHERASHLPQFCSTQFSFLIDPHFDCDS 114
            MMLVGSEVHGITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAVIKAGIKHERASHLPQFCSTQFSFLIDPHFDCDS
Sbjct:    1 MMLVGSEVHGITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAVIKAGIKHERASHLPQFCSTQFSFLIDPHFDCDS 100
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86VS22|A0AA86VS22_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS18835 PE=4 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 3.594e-48
Identity = 78/116 (67.24%), Postives = 91/116 (78.45%), Query Frame = 0 
Query:    1 MGEKTVIVFGLVINMMLVGSE--VHGITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAVIKAGIKHERASHLPQFCSTQFSFLIDPHFDCDS 114
            M  KTVIV GL+INMMLV SE  V+GITC +A+ YLLPCE FLLGLGP AP   CCT+I  IF +TKTVK+RR ICNCLK++ I AG+KHER + LP++C T FSFLIDP  DCDS
Sbjct:    1 MKGKTVIVLGLLINMMLVASESEVNGITCGKAVVYLLPCETFLLGLGPPAPSLNCCTSIAVIFRQTKTVKLRRYICNCLKKSAIHAGVKHERVALLPKYCKTHFSFLIDPFMDCDS 116
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0K900|A0A8T0K900_PHAAN (Non-specific lipid-transfer protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0065480 PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.071e-45
Identity = 73/114 (64.04%), Postives = 87/114 (76.32%), Query Frame = 0 
Query:    1 MGEKTVIVFGLVINMMLVGSEVHGITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAVIKAGIKHERASHLPQFCSTQFSFLIDPHFDCDS 114
            MG+KT I + L I+MMLV SEVH ITCNEAIT+LLPCEPF+LGLGP  P   CCT+I  IF +TKT ++RRS C+CLK A  +AGIKHERA+ L + C T+FSF IDP  DC S
Sbjct:    1 MGKKTFIAYVLFISMMLVESEVHAITCNEAITFLLPCEPFMLGLGPRIPSLSCCTSIAIIFKQTKTPELRRSTCSCLKNAAFQAGIKHERATLLSRLCRTRFSFPIDPLVDCSS 114
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6KJ73|A0A4D6KJ73_VIGUN (Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g366 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.155e-43
Identity = 75/116 (64.66%), Postives = 87/116 (75.00%), Query Frame = 0 
Query:    1 MGEKTVIVFGLVINMMLVGSEVHG--ITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAVIKAGIKHERASHLPQFCSTQFSFLIDPHFDCDS 114
            M +KT+I F L+I+MM VGSEVH   ITC EAIT LLPCEPFLLGLGP  P   CCT+I  IF ET TV++RRSIC+CLK A  +AGIKH+ A+ L Q C T+FSF IDP  DCDS
Sbjct:    1 MEKKTLIGFVLLISMMFVGSEVHANDITCIEAITLLLPCEPFLLGLGPTTPSLNCCTSIAVIFKETTTVELRRSICSCLKNAAFQAGIKHDSAAKLSQLCKTRFSFPIDPFVDCDS 116
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151T7E6|A0A151T7E6_CAJCA (Non-specific lipid-transfer protein AP10 OS=Cajanus cajan OX=3821 GN=KK1_017494 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.422e-34
Identity = 61/121 (50.41%), Postives = 82/121 (67.77%), Query Frame = 0 
Query:    1 MGEKTV-------IVFGLVINMMLVGSEVHGITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAVIKAGIKHERASHLPQFCSTQFSFLIDPHFDCDS 114
            MGEK +       + FGL+ +M + G +   ITCNEA+TYLLPCEPF+L LGP+ P   CC  +  IF +TK + VRRS+C C+K++ ++AGIKHERA  LPQFC   F+F I P+ +C S
Sbjct:    1 MGEKKMATLYMCMMSFGLLTSM-VSGFQREEITCNEALTYLLPCEPFMLNLGPLEPSSQCCGGLVAIFLKTKKLGVRRSMCQCIKKSTLEAGIKHERAQLLPQFCKIHFAFPITPNANCSS 120
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371E9S6|A0A371E9S6_MUCPR (Non-specific lipid-transfer protein 1 (Fragment) OS=Mucuna pruriens OX=157652 GN=LTP1 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.657e-33
Identity = 60/110 (54.55%), Postives = 74/110 (67.27%), Query Frame = 0 
Query:    7 IVFGLVINMMLVGSEVHGIT--CNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAVIKAGIKHERASHLPQFCSTQFSFLIDPHFDCDS 114
            + FGLVI + +  SE+ G    CN+A+T LLPCEPF+LGLGP+APP  CC  +  IF   KT+  RR  C CLK A+++AGIKH RA  LP+FC   FSF IDP  DC S
Sbjct:    9 VAFGLVITI-VTASEIDGTATECNKAVTNLLPCEPFMLGLGPVAPPNNCCMGLAIIFERAKTLYDRRFTCTCLKVAMMRAGIKHRRAIQLPRFCKIHFSFPIDPLVDCTS 117
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. ExPASy TrEMBL (2024)
Match: tr|A0A314ZR60|A0A314ZR60_PRUYE (Non-specific lipid-transfer protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_04473 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 8.511e-26
Identity = 46/113 (40.71%), Postives = 68/113 (60.18%), Query Frame = 0 
Query:    1 MGEKTVIVFGLVINMMLVGSEVHGITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAVIKAGIKHERASHLPQFCSTQFSFLIDPHFDCD 113
            MG  ++IVFGLV+ ++   S  +G+TC EA+  L+PCEP+L+G GP  P   CC  ++T+ SE  + ++RRS+C CLK+A     I   R   +P+FC       +DP  DC 
Sbjct:    4 MGCWSLIVFGLVVMVLNNASPANGVTCQEALMTLMPCEPYLVGSGPGTPAVPCCAGVQTLVSEASSTEIRRSLCECLKKAAAGMKIDPGRLKAMPEFCKVSMPVPLDPAVDCS 116
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. ExPASy TrEMBL (2024)
Match: tr|A0A314Y6C3|A0A314Y6C3_PRUYE (Non-specific lipid-transfer protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_40185 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.260e-24
Identity = 44/113 (38.94%), Postives = 67/113 (59.29%), Query Frame = 0 
Query:    1 MGEKTVIVFGLVINMMLVGSEVHGITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAVIKAGIKHERASHLPQFCSTQFSFLIDPHFDCD 113
            MG  ++IVFGLV+ ++      +G+TC EA+  L+PCEP+L+G GP  P   CC  ++T+ SE  + ++RRS+C CLK+A     I   R   +P++C       +DP  DC 
Sbjct:    4 MGFWSLIVFGLVVMVLNNACPANGVTCQEALMTLMPCEPYLVGSGPGTPAVPCCAGVQTLVSEASSTEIRRSLCECLKKAAAGMKIDPGRLKAMPEYCKVSMPVPLDPAVDCS 116
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. ExPASy TrEMBL (2024)
Match: tr|A0A314ZYX7|A0A314ZYX7_PRUYE (Non-specific lipid-transfer protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_16063 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.552e-24
Identity = 44/113 (38.94%), Postives = 67/113 (59.29%), Query Frame = 0 
Query:    1 MGEKTVIVFGLVINMMLVGSEVHGITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAVIKAGIKHERASHLPQFCSTQFSFLIDPHFDCD 113
            MG  ++IVFGLV+ ++      +G+TC EA+  L+PCEP+L+G GP  P   CC  ++T+ SE  + ++RRS+C CLK+A     I   R   +P++C       +DP  DC 
Sbjct:    6 MGCWSLIVFGLVVMVLNNACPANGVTCQEALMTLMPCEPYLVGSGPGTPAVPCCAGVQTLVSEASSTEIRRSLCECLKKAAAGMKIDPGRLKAMPEYCKVSMPVPLDPAVDCS 118
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2Z7B0|A0A1S2Z7B0_CICAR (Non-specific lipid-transfer protein OS=Cicer arietinum OX=3827 GN=LOC101489941 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.270e-24
Identity = 45/109 (41.28%), Postives = 62/109 (56.88%), Query Frame = 0 
Query:    6 VIVFGLVINMMLVGSEVHGITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAVIKAGIKHERASHLPQFCSTQFSFLIDPHFDCDS 114
            V+V GL     L   ++  I+C+EAI  L+PC PFL GLG   P   CC   + +  +  T +VRR +C CLK A +K G+  +R   LPQ C+   SF IDP  DC++
Sbjct:   13 VMVLGLQAVTTLDARQIDDISCSEAIVLLVPCVPFLTGLGQPTPSTSCCEGAQNLNQKADTTQVRRDVCECLKGASMKFGVNSDRTKQLPQLCNISLSFSIDPSIDCNT 121
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q41073|NLTP_PINTA (Non-specific lipid-transfer protein OS=Pinus taeda OX=3352 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.711e-17
Identity = 39/114 (34.21%), Postives = 61/114 (53.51%), Query Frame = 0 
Query:    4 KTVIVFGLVINMMLVGSEV---HGITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAVIKAGIKHERASHLPQFCS-TQFSFLIDPHFDCD 113
            + V V GLV+ MM V   V     I+CN+ ++ + PC  +L+G     P   CC +I+ + S+ K    R+++CNCLK      G+K  +A++LP  C  T  +  I P+ DC 
Sbjct:    8 EAVFVVGLVVTMMNVWGAVPVEGAISCNQVVSAMTPCATYLIG-NAATPAATCCPSIRGLDSQVKATPDRQAVCNCLKTQAKSYGVKLGKAANLPGLCKVTDLNVPISPNVDCS 120
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q43129|NLTP2_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum OX=3635 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.473e-15
Identity = 39/107 (36.45%), Postives = 55/107 (51.40%), Query Frame = 0 
Query:   11 LVINMMLVGSEVH--GITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAVIK-AGIKHERASHLPQFCSTQFSFLIDPHFDCDS 114
            +V+  M+VG+ +    +T  +    L PC  +L G G  A PP CCT IK++ S  +T  VR++ C C+K A     GI    AS LP  C     + I P  DC+S
Sbjct:   12 VVVLCMVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNS 118
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q42762|NLTP1_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum OX=3635 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.816e-15
Identity = 39/107 (36.45%), Postives = 55/107 (51.40%), Query Frame = 0 
Query:   11 LVINMMLVGSEV--HGITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAVIK-AGIKHERASHLPQFCSTQFSFLIDPHFDCDS 114
            +V+  M+VG+ +    +T  +    L PC  +L G G  A PP CCT IK++ S  +T  VR++ C C+K A     GI    AS LP  C     + I P  DC+S
Sbjct:    8 VVVLCMVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNS 114
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. ExPASy Swiss-Prot (2024)
Match: sp|P82007|NLTP1_HELAN (Non-specific lipid-transfer protein AP10 OS=Helianthus annuus OX=4232 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 1.554e-14
Identity = 34/109 (31.19%), Postives = 53/109 (48.62%), Query Frame = 0 
Query:    6 VIVFGLVINMMLVGSEVHGITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAVIKAGIKHERASHLPQFCSTQFSFLIDPHFDCDS 114
            V +  +++   L+      ITCN+    L PC P+L   G   P P CC   K +   T+T   RR+ C C K A  +  ++ + AS LP  C    S  I+P+ +C++
Sbjct:    8 VAILAMIVMAQLMVHPSVAITCNDVTGNLTPCLPYLRSGG--KPTPACCAGAKKLLGATRTQADRRTACKCAKTAAPQLKVRPDMASSLPGKCGISTSIPINPNVNCNT 114
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. ExPASy Swiss-Prot (2024)
Match: sp|P27056|NLTP1_SOLLC (Non-specific lipid-transfer protein 1 OS=Solanum lycopersicum OX=4081 GN=TSW12 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 2.894e-14
Identity = 34/102 (33.33%), Postives = 49/102 (48.04%), Query Frame = 0 
Query:   15 MMLVGSEVHGITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEA--VIKAGIKHERASHLPQFCSTQFSFLIDPHFDCDS 114
            M++V      +TC +    L PC P+L G GP+     CC  +K +    KT   R++ C CLK A   IK GI   +A+ +P  C     + I P  DC +
Sbjct:   15 MVVVAPHAEALTCGQVTAGLAPCLPYLQGRGPLGG---CCGGVKNLLGSAKTTADRKTACTCLKSAANAIK-GIDLNKAAGIPSVCKVNIPYKISPSTDCST 112
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. ExPASy Swiss-Prot (2024)
Match: sp|P80450|NLTP_AMACA (Non-specific lipid-transfer protein OS=Amaranthus caudatus OX=3567 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 3.576e-14
Identity = 29/92 (31.52%), Postives = 48/92 (52.17%), Query Frame = 0 
Query:   24 GITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAVIKA-GIKHERASHLPQFCSTQFSFLIDPHFDCDS 114
             +TC      L PC  +L G G   PP  CC  ++++ +  +TV  RR  CNC+K A  K   + ++ A+ L   C  + S+ + P+ +C+S
Sbjct:    1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNS 92
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. ExPASy Swiss-Prot (2024)
Match: sp|P83167|NLTP1_AMAHP (Non-specific lipid-transfer protein 1 OS=Amaranthus hypochondriacus OX=28502 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 3.576e-14
Identity = 29/92 (31.52%), Postives = 48/92 (52.17%), Query Frame = 0 
Query:   24 GITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAVIKA-GIKHERASHLPQFCSTQFSFLIDPHFDCDS 114
             +TC      L PC  +L G G   PP  CC  ++++ +  +TV  RR  CNC+K A  K   + ++ A+ L   C  + S+ + P+ +C+S
Sbjct:    1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNS 92
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. ExPASy Swiss-Prot (2024)
Match: sp|O24037|NLTP1_SOLPN (Non-specific lipid-transfer protein 1 OS=Solanum pennellii OX=28526 GN=LTP1 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 3.958e-14
Identity = 34/106 (32.08%), Postives = 52/106 (49.06%), Query Frame = 0 
Query:   11 LVINMMLVGSEVHGITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEA--VIKAGIKHERASHLPQFCSTQFSFLIDPHFDCDS 114
            +++ M++V      +TC +    L PC P+L G GP+     CC  +K +    KT   R++ C CLK A   IK GI   +A+ +P  C     + I P  DC +
Sbjct:   11 VLLCMVVVAPHAEALTCGQVTAGLAPCLPYLQGRGPLGG---CCGGVKGLLGSAKTTADRKTACTCLKSAANAIK-GIDLNKAAGIPSVCKVNIPYKISPSTDCST 112
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q03461|NLTP2_TOBAC (Non-specific lipid-transfer protein 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 4.506e-14
Identity = 34/105 (32.38%), Postives = 53/105 (50.48%), Query Frame = 0 
Query:   11 LVINMMLVGSEVHGITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEA--VIKAGIKHERASHLPQFCSTQFSFLIDPHFDCD 113
            +V+ M++V      ++C +  + L PC P+L G GP+     CC  +K +    K++  R++ C CLK A   IK GI   +A+ LP  C     + I P  DC 
Sbjct:   11 VVLCMVVVAPHAEALSCGQVQSGLAPCLPYLQGRGPLGS---CCGGVKGLLGAAKSLSDRKTACTCLKSAANAIK-GIDMGKAAGLPGACGVNIPYKISPSTDCS 111
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9M5X6|NLTP_PYRCO (Non-specific lipid-transfer protein OS=Pyrus communis OX=23211 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.412e-14
Identity = 38/115 (33.04%), Postives = 53/115 (46.09%), Query Frame = 0 
Query:    1 MGEKTVIVFGLVINMMLVGSEVHGITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKE-AVIKAGIKHERASHLPQFCSTQFSFLIDPHFDCDS 114
            M    VI   LV+ + +  S  H ITC++    L PC  ++   G +  PP CC  IKTI    KT   R++ CNCLK  A   +G+    A  LP  C     + I    +C +
Sbjct:    1 MASSAVIKLALVVALCMAVSVAHAITCSQVSANLAPCINYVRSGGAV--PPACCNGIKTINGLAKTTPDRQAACNCLKNLAGSVSGVNPGNAESLPGKCGVNVPYKISTSTNCAT 113
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. Araport11
Match: | (Symbols: LTP6, AtLtpI-6 | lipid transfer protein 6 | chr3:2664349-2664784 REVERSE LENGTH=113)

HSP 1 Score: 54.299 bits (129), Expect = 1.632e-10
Identity = 28/94 (29.79%), Postives = 45/94 (47.87%), Query Frame = 0 
Query:   24 GITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAVIKAGIKH---ERASHLPQFCSTQFSFLIDPHFDCDS 114
             ++CN  I  L PC  ++   GP+  P +CC  + T+ S+ +T   R+ +C C+K A+    +     + A  LP  C     +   P  DCDS
Sbjct:   20 AVSCNTVIADLYPCLSYVTQGGPV--PTLCCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDCDS 111
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. Araport11
Match: | (Symbols: LTP6, AtLtpI-6 | lipid transfer protein 6 | chr3:2664330-2664784 REVERSE LENGTH=117)

HSP 1 Score: 54.299 bits (129), Expect = 1.813e-10
Identity = 28/94 (29.79%), Postives = 45/94 (47.87%), Query Frame = 0 
Query:   24 GITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAVIKAGIKH---ERASHLPQFCSTQFSFLIDPHFDCDS 114
             ++CN  I  L PC  ++   GP+  P +CC  + T+ S+ +T   R+ +C C+K A+    +     + A  LP  C     +   P  DCDS
Sbjct:   20 AVSCNTVIADLYPCLSYVTQGGPV--PTLCCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDCDS 111
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:337234-337678 FORWARD LENGTH=116)

HSP 1 Score: 53.1434 bits (126), Expect = 5.224e-10
Identity = 30/107 (28.04%), Postives = 54/107 (50.47%), Query Frame = 0 
Query:   11 LVINMMLVGSEVHGITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAVIK---AGIKHERASHLPQFCSTQFSFLIDPHFDCDS 114
            L+ ++   GSE   I+CN     L PC  +++  G I  P  CC  I+ +  +  +   ++ +C C+K  V +   + I  ++A+ LP  C  +  + IDP  +C+S
Sbjct:   11 LLASIFAWGSEA-AISCNAVQANLYPCVVYVVQGGAI--PYSCCNGIRMLSKQATSASDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNS 114
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. Araport11
Match: | (Symbols: LTP, LTP7 | lipid transfer protein, lipid transfer protein 7 | chr2:6518888-6519888 FORWARD LENGTH=122)

HSP 1 Score: 51.6026 bits (122), Expect = 2.205e-9
Identity = 24/89 (26.97%), Postives = 42/89 (47.19%), Query Frame = 0 
Query:   25 ITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAV--IKAGIKHERASHLPQFCSTQFSFLIDPHFD 111
            ++C E  + L PC  +L   G  +P P CC  ++ +     T   RR  C C+K A   +  G+  +RA+ +P+ C  +  +     F+
Sbjct:   27 LSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFN 115
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. Araport11
Match: | (Symbols: LTP, LTP7 | lipid transfer protein, lipid transfer protein 7 | chr2:6518888-6519259 FORWARD LENGTH=123)

HSP 1 Score: 51.6026 bits (122), Expect = 2.527e-9
Identity = 24/89 (26.97%), Postives = 42/89 (47.19%), Query Frame = 0 
Query:   25 ITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAV--IKAGIKHERASHLPQFCSTQFSFLIDPHFD 111
            ++C E  + L PC  +L   G  +P P CC  ++ +     T   RR  C C+K A   +  G+  +RA+ +P+ C  +  +     F+
Sbjct:   27 LSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFN 115
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. Araport11
Match: | (Symbols: ATLTP1, AtLtpI-4, LTP1, LP1 | ARABIDOPSIS THALIANA LIPID TRANSFER PROTEIN 1, lipid transfer protein 1, LIPID TRANSFER PROTEIN 1 | chr2:16130418-16130893 FORWARD LENGTH=118)

HSP 1 Score: 51.2174 bits (121), Expect = 2.550e-9
Identity = 26/92 (28.26%), Postives = 46/92 (50.00%), Query Frame = 0 
Query:   25 ITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEA--VIKAGIKHERASHLPQFCSTQFSFLIDPHFDCDS 114
            ++C    + L  C  ++L  G I  PP CC+ +K + S  KT   R+  CNC++ A   + +G+   RA+ +P+ C     + I    +C +
Sbjct:   27 LSCGSVNSNLAACIGYVLQGGVI--PPACCSGVKNLNSIAKTTPDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNCKT 116
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. Araport11
Match: | (Symbols: LTP3 | lipid transfer protein 3 | chr5:23929051-23929492 FORWARD LENGTH=115)

HSP 1 Score: 50.8322 bits (120), Expect = 3.679e-9
Identity = 31/105 (29.52%), Postives = 48/105 (45.71%), Query Frame = 0 
Query:   11 LVINMMLVGSEVHGITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAVIK-AGIKHERASHLPQFCSTQFSFLIDPHFDCDS 114
            LV+ + +V S    I+C      L PC  +L   G +  PP CC  +KT+ S  KT   R+  C C++      +G+    AS LP  C     + I    +C++
Sbjct:   11 LVLTVCIVASVDAAISCGTVAGSLAPCATYLSKGGLV--PPSCCAGVKTLNSMAKTTPDRQQACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCNN 113
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:16067097-16067568 FORWARD LENGTH=119)

HSP 1 Score: 50.447 bits (119), Expect = 5.712e-9
Identity = 33/107 (30.84%), Postives = 47/107 (43.93%), Query Frame = 0 
Query:   11 LVINMMLVGSEVHG--ITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKE-AVIKAGIKHERASHLPQFCSTQFSFLIDPHFDCDS 114
            L++  +L+G   HG  I C +   YL  C P+L   G   P P+CC  + ++ +       R+  CNCLK  A    GI  + A  LP  C            DC+S
Sbjct:   13 LLVITILLGIAYHGEAIACPQVNMYLAQCLPYLKAGG--NPSPMCCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNS 117
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. Araport11
Match: | (Symbols: LTP, LTP7 | lipid transfer protein, lipid transfer protein 7 | chr2:6518888-6519888 FORWARD LENGTH=115)

HSP 1 Score: 50.0618 bits (118), Expect = 7.117e-9
Identity = 23/82 (28.05%), Postives = 40/82 (48.78%), Query Frame = 0 
Query:   25 ITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAV--IKAGIKHERASHLPQFCSTQFSF 104
            ++C E  + L PC  +L   G  +P P CC  ++ +     T   RR  C C+K A   +  G+  +RA+ +P+ C  +  +
Sbjct:   27 LSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPY 108
[Close]
BLAST of PvulFLAVERTChr06.1001906 vs. Araport11
Match: | (Symbols: LTP4, AtLtpI-11 | lipid transfer protein 4 | chr5:23925296-23925772 REVERSE LENGTH=112)

HSP 1 Score: 49.2914 bits (116), Expect = 1.270e-8
Identity = 31/104 (29.81%), Postives = 46/104 (44.23%), Query Frame = 0 
Query:   11 LVINMMLVGSEVHGITCNEAITYLLPCEPFLLGLGPIAPPPICCTNIKTIFSETKTVKVRRSICNCLKEAVIKAGIKHERASHLPQFCSTQFSFLIDPHFDCDS 114
             V+ + +V S    ITC    + L PC  +L   G + PPP CC  +K +    +T   R+  C CL+ A    G+    AS LP  C     + I    +C +
Sbjct:   11 FVLTVFIVASVDAAITCGTVASSLSPCLGYL-SKGGVVPPP-CCAGVKKLNGMAQTTPDRQQACRCLQSAA--KGVNPSLASGLPGKCGVSIPYPISTSTNCAT 110
The following BLAST results are available for this feature:
BLAST of PvulFLAVERTChr06.1001906 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|V7BT14|V7BT14_PHAVU2.640e-67100.00Bifunctional inhibitor/plant lipid transfer protei... [more]
tr|A0AA86VS22|A0AA86VS22_9FABA3.594e-4867.24Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A8T0K900|A0A8T0K900_PHAAN5.071e-4564.04Non-specific lipid-transfer protein OS=Phaseolus a... [more]
tr|A0A4D6KJ73|A0A4D6KJ73_VIGUN1.155e-4364.66Bifunctional inhibitor/plant lipid transfer protei... [more]
tr|A0A151T7E6|A0A151T7E6_CAJCA6.422e-3450.41Non-specific lipid-transfer protein AP10 OS=Cajanu... [more]
tr|A0A371E9S6|A0A371E9S6_MUCPR2.657e-3354.55Non-specific lipid-transfer protein 1 (Fragment) O... [more]
tr|A0A314ZR60|A0A314ZR60_PRUYE8.511e-2640.71Non-specific lipid-transfer protein OS=Prunus yedo... [more]
tr|A0A314Y6C3|A0A314Y6C3_PRUYE1.260e-2438.94Non-specific lipid-transfer protein OS=Prunus yedo... [more]
tr|A0A314ZYX7|A0A314ZYX7_PRUYE1.552e-2438.94Non-specific lipid-transfer protein OS=Prunus yedo... [more]
tr|A0A1S2Z7B0|A0A1S2Z7B0_CICAR2.270e-2441.28Non-specific lipid-transfer protein OS=Cicer ariet... [more]
back to top
BLAST of PvulFLAVERTChr06.1001906 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q41073|NLTP_PINTA2.711e-1734.21Non-specific lipid-transfer protein OS=Pinus taeda... [more]
sp|Q43129|NLTP2_GOSHI2.473e-1536.45Non-specific lipid-transfer protein OS=Gossypium h... [more]
sp|Q42762|NLTP1_GOSHI2.816e-1536.45Non-specific lipid-transfer protein OS=Gossypium h... [more]
sp|P82007|NLTP1_HELAN1.554e-1431.19Non-specific lipid-transfer protein AP10 OS=Helian... [more]
sp|P27056|NLTP1_SOLLC2.894e-1433.33Non-specific lipid-transfer protein 1 OS=Solanum l... [more]
sp|P80450|NLTP_AMACA3.576e-1431.52Non-specific lipid-transfer protein OS=Amaranthus ... [more]
sp|P83167|NLTP1_AMAHP3.576e-1431.52Non-specific lipid-transfer protein 1 OS=Amaranthu... [more]
sp|O24037|NLTP1_SOLPN3.958e-1432.08Non-specific lipid-transfer protein 1 OS=Solanum p... [more]
sp|Q03461|NLTP2_TOBAC4.506e-1432.38Non-specific lipid-transfer protein 2 OS=Nicotiana... [more]
sp|Q9M5X6|NLTP_PYRCO9.412e-1433.04Non-specific lipid-transfer protein OS=Pyrus commu... [more]
back to top
BLAST of PvulFLAVERTChr06.1001906 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
|1.632e-1029.79Symbols: LTP6, AtLtpI-6 | lipid transfer protein 6... [more]
|1.813e-1029.79Symbols: LTP6, AtLtpI-6 | lipid transfer protein 6... [more]
|5.224e-1028.04Symbols: no symbol available | no full name availa... [more]
|2.205e-926.97Symbols: LTP, LTP7 | lipid transfer protein, lipid... [more]
|2.527e-926.97Symbols: LTP, LTP7 | lipid transfer protein, lipid... [more]
|2.550e-928.26Symbols: ATLTP1, AtLtpI-4, LTP1, LP1 | ARABIDOPSIS... [more]
|3.679e-929.52Symbols: LTP3 | lipid transfer protein 3 | chr5:23... [more]
|5.712e-930.84Symbols: no symbol available | no full name availa... [more]
|7.117e-928.05Symbols: LTP, LTP7 | lipid transfer protein, lipid... [more]
|1.270e-829.81Symbols: LTP4, AtLtpI-11 | lipid transfer protein ... [more]
back to top
InterPro
Analysis Name: Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000528Plant non-specific lipid-transfer protein/Par allergenPRINTSPR00382LIPIDTRNSFERcoord: 69..84
score: 36.92
coord: 26..42
score: 27.6
coord: 103..114
score: 29.36
coord: 48..62
score: 30.15
coord: 85..102
score: 26.67
IPR000528Plant non-specific lipid-transfer protein/Par allergenPANTHERPTHR33076NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATEDcoord: 14..113
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilyGENE3D1.10.110.10coord: 24..114
e-value: 1.4E-21
score: 78.8
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 25..113
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF00234Tryp_alpha_amylcoord: 27..112
e-value: 2.3E-4
score: 32.7
NoneNo IPR availableCDDcd01960nsLTP1coord: 25..113
e-value: 9.49444E-22
score: 80.0865

Analysis Name: InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000528Plant non-specific lipid-transfer protein/Par allergenPRINTSPR00382LIPIDTRNSFERcoord: 69..84
score: 36.92
coord: 26..42
score: 27.6
coord: 103..114
score: 29.36
coord: 48..62
score: 30.15
coord: 85..102
score: 26.67
IPR000528Plant non-specific lipid-transfer protein/Par allergenPANTHERPTHR33076NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATEDcoord: 14..113
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilyGENE3D1.10.110.10coord: 24..114
e-value: 1.4E-21
score: 78.8
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 25..113
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF00234Tryp_alpha_amylcoord: 27..112
e-value: 2.3E-4
score: 32.7
NoneNo IPR availableCDDcd01960nsLTP1coord: 25..113
e-value: 9.49444E-22
score: 80.0865

Sequences
The following sequences are available for this feature:

mRNA sequence

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr06.1001906 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr06.1001906; Name=PvulFLAVERTChr06.1001906; organism=Phaseolus vulgaris; type=mRNA; length=345bp
ATGGGAGAGAAGACAGTGATAGTTTTTGGGTTGGTAATAAACATGATGTT
AGTTGGAAGTGAAGTTCATGGTATAACATGTAATGAGGCTATAACTTATT
TGTTGCCATGTGAGCCATTCTTGCTGGGTTTGGGTCCAATAGCACCACCT
CCCATTTGCTGTACAAACATAAAGACAATATTTTCAGAGACAAAAACAGT
TAAGGTTCGTAGATCCATATGTAATTGTCTCAAGGAAGCTGTCATTAAAG
CAGGAATCAAGCATGAGAGAGCCTCACATCTTCCTCAATTCTGCAGTACT
CAGTTTTCGTTCCTCATTGATCCACACTTCGATTGTGATTCGTAA
back to top

protein sequence of drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr06.1001906

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr06.1001906 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr06.1001906; Name=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr06.1001906; organism=Phaseolus vulgaris; type=polypeptide; length=114bp
MGEKTVIVFGLVINMMLVGSEVHGITCNEAITYLLPCEPFLLGLGPIAPP
PICCTNIKTIFSETKTVKVRRSICNCLKEAVIKAGIKHERASHLPQFCST
QFSFLIDPHFDCDS
back to top

mRNA from alignment at Chr06:33700582..33700926-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr06.1001906 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr06.1001906; Name=PvulFLAVERTChr06.1001906; organism=Phaseolus vulgaris; type=mRNA; length=345bp; location=Sequence derived from: Chr06:33700582..33700926- (Phaseolus vulgaris
ATGGGAGAGAAGACAGTGATAGTTTTTGGGTTGGTAATAAACATGATGTT
AGTTGGAAGTGAAGTTCATGGTATAACATGTAATGAGGCTATAACTTATT
TGTTGCCATGTGAGCCATTCTTGCTGGGTTTGGGTCCAATAGCACCACCT
CCCATTTGCTGTACAAACATAAAGACAATATTTTCAGAGACAAAAACAGT
TAAGGTTCGTAGATCCATATGTAATTGTCTCAAGGAAGCTGTCATTAAAG
CAGGAATCAAGCATGAGAGAGCCTCACATCTTCCTCAATTCTGCAGTACT
CAGTTTTCGTTCCTCATTGATCCACACTTCGATTGTGATTCGTAA
back to top

Coding sequence (CDS) from alignment at Chr06:33700582..33700926-

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr06.1001906 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr06.1001906; Name=PvulFLAVERTChr06.1001906; organism=Phaseolus vulgaris; type=CDS; length=345bp; location=Sequence derived from: Chr06:33700582..33700926- (Phaseolus vulgaris
ATGGGAGAGAAGACAGTGATAGTTTTTGGGTTGGTAATAAACATGATGTT
AGTTGGAAGTGAAGTTCATGGTATAACATGTAATGAGGCTATAACTTATT
TGTTGCCATGTGAGCCATTCTTGCTGGGTTTGGGTCCAATAGCACCACCT
CCCATTTGCTGTACAAACATAAAGACAATATTTTCAGAGACAAAAACAGT
TAAGGTTCGTAGATCCATATGTAATTGTCTCAAGGAAGCTGTCATTAAAG
CAGGAATCAAGCATGAGAGAGCCTCACATCTTCCTCAATTCTGCAGTACT
CAGTTTTCGTTCCTCATTGATCCACACTTCGATTGTGATTCGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000528Plant_nsLTP
IPR036312Bifun_inhib/LTP/seed_sf
IPR016140Bifunc_inhib/LTP/seed_store
Vocabulary: Molecular Function
TermDefinition
GO:0008289lipid binding
Vocabulary: Biological Process
TermDefinition
GO:0006869lipid transport