PvulFLAVERTChr10.1663

Transcript Overview


Name	PvulFLAVERTChr10.1663
Unique Name	drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr10.1663
Type	mRNA
Organism	Phaseolus vulgaris (Common bean)
Sequence length	3489

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr10	chromosome	Chr10:43571704..43578316 +	Phaseolus vulgaris cv. Flavert genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Phaseolus vulgaris cv. Flavert genome v1.0	2024-07-01
Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL	2024-08-19
Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot	2024-08-19
Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11	2024-08-19
InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0	2024-08-19

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
anpvfL0010	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjpvfL005	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anpvfL0112	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjpvfL179	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anpvfL0723	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anpvfL0880	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjpvfL657	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anpvfL1046	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anpvfL1113	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anpvfL1115	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anpvfL1393	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anpvfL1398	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
carpvfL004	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
ccapvfL091	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccapvfL158	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
pspvfL436	Pisum sativum Cameor genome v1a	Pisum sativum
carpvfL551	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
pspvfL746	Pisum sativum Cameor genome v1a	Pisum sativum
carpvfL785	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
pvfpvfR078	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
pvfvfhR086	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
pvfvrvR085	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
pvfvfhR118	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
pvfvrvR110	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
pvfvssR098	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
pvfvssR104	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
pvfvuR070	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
pvpvfL068	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
pvfvuR096	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
pvpvfL430	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris

Orthologs


Gene/Transcript	Assembly	Species
rna-TanjilR_18177	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Va11G001830.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
Vfaba.Hedin2.R1.2g260760.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
rna-XM_014660746.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
jg57266.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Psat7g252720.1	Pisum sativum Cameor genome v1a	Pisum sativum
rna-TanjilR_27289	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Vigun10g185200.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Phvul.010G150900.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
PvulFLAVERTChr10.1663	drPhaVulg.Flavert.1.0gene:PvulFLAVERTChr10.1663	Phaseolus vulgaris	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr10.1663.utr0	drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr10.1663.utr0	Phaseolus vulgaris	exon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr10.1663.1	drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr10.1663.1	Phaseolus vulgaris	exon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr10.1663.2	drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr10.1663.2	Phaseolus vulgaris	exon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr10.1663.3	drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr10.1663.3	Phaseolus vulgaris	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr10.1663.0	drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr10.1663.0	Phaseolus vulgaris	five_prime_UTR
drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr10.1663.2	drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr10.1663.2	Phaseolus vulgaris	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr10.1663.1	drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr10.1663.1	Phaseolus vulgaris	CDS
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr10.1663.2	drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr10.1663.2	Phaseolus vulgaris	CDS
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr10.1663.3	drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr10.1663.3	Phaseolus vulgaris	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr10.1663.8	drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr10.1663.8	Phaseolus vulgaris	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr10.1663	drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr10.1663	Phaseolus vulgaris	polypeptide
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr10.1663	drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr10.1663-protein	Phaseolus vulgaris	polypeptide

Homology

[Close]

BLAST of PvulFLAVERTChr10.1663 vs. ExPASy TrEMBL (2024)
Match: tr|V7AQ64|V7AQ64_PHAVU (Protein SYS1 homolog OS=Phaseolus vulgaris OX=3885 GN=PHAVU_010G150900g PE=3 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 2.500e-102
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0

Query:    1 MFYGAVVWDPWLIVAQIVGLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVSGAVYMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRSNV 152
            MFYGAVVWDPWLIVAQIV LQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVSGAVYMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRSNV
Sbjct:    1 MFYGAVVWDPWLIVAQIVCLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVSGAVYMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRSNV 152

[Close]

BLAST of PvulFLAVERTChr10.1663 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9T9V7|A0A0L9T9V7_PHAAN (Protein SYS1 homolog OS=Phaseolus angularis OX=3914 GN=LR48_Vigan406s015200 PE=3 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 2.953e-101
Identity = 148/152 (97.37%), Postives = 151/152 (99.34%), Query Frame = 0

Query:    1 MFYGAVVWDPWLIVAQIVGLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVSGAVYMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRSNV 152
            MFYGAVVWDPWLIVAQIV LQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSV+G++YMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRSNV
Sbjct:    1 MFYGAVVWDPWLIVAQIVCLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVAGSIYMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRSNV 152

[Close]

BLAST of PvulFLAVERTChr10.1663 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3VDE5|A0A1S3VDE5_VIGRR (Protein SYS1 homolog isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106773973 PE=3 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 2.953e-101
Identity = 148/152 (97.37%), Postives = 151/152 (99.34%), Query Frame = 0

Query:    1 MFYGAVVWDPWLIVAQIVGLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVSGAVYMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRSNV 152
            MFYGAVVWDPWLIVAQIV LQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSV+G++YMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRSNV
Sbjct:    1 MFYGAVVWDPWLIVAQIVCLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVAGSIYMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRSNV 152

[Close]

BLAST of PvulFLAVERTChr10.1663 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3T0M0|A0A0S3T0M0_PHAAN (Protein SYS1 homolog OS=Vigna angularis var. angularis OX=157739 GN=Vigan.09G218800 PE=3 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 7.456e-100
Identity = 146/151 (96.69%), Postives = 150/151 (99.34%), Query Frame = 0

Query:    1 MFYGAVVWDPWLIVAQIVGLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVSGAVYMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRSN 151
            MFYGAVVWDPWLIVAQIV LQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSV+G++YMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRS+
Sbjct:    1 MFYGAVVWDPWLIVAQIVCLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVAGSIYMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRSS 151

[Close]

BLAST of PvulFLAVERTChr10.1663 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0JQ61|A0A8T0JQ61_PHAAN (Protein SYS1 homolog OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0165900 PE=3 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 7.456e-100
Identity = 146/151 (96.69%), Postives = 150/151 (99.34%), Query Frame = 0

Query:    1 MFYGAVVWDPWLIVAQIVGLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVSGAVYMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRSN 151
            MFYGAVVWDPWLIVAQIV LQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSV+G++YMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRS+
Sbjct:    1 MFYGAVVWDPWLIVAQIVCLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVAGSIYMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRSS 151

[Close]

BLAST of PvulFLAVERTChr10.1663 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q0FHI0|A0A3Q0FHI0_VIGRR (Protein SYS1 homolog isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106773973 PE=3 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 7.610e-100
Identity = 146/151 (96.69%), Postives = 149/151 (98.68%), Query Frame = 0

Query:    1 MFYGAVVWDPWLIVAQIVGLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVSGAVYMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRSN 151
            MFYGAVVWDPWLIVAQIV LQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSV+G++YMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRS 
Sbjct:    1 MFYGAVVWDPWLIVAQIVCLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVAGSIYMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRSK 151

[Close]

BLAST of PvulFLAVERTChr10.1663 vs. ExPASy TrEMBL (2024)
Match: tr|I1KV88|I1KV88_SOYBN (Protein SYS1 homolog OS=Glycine max OX=3847 GN=100817072 PE=3 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 5.801e-98
Identity = 141/152 (92.76%), Postives = 150/152 (98.68%), Query Frame = 0

Query:    1 MFYGAVVWDPWLIVAQIVGLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVSGAVYMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRSNV 152
            MFYG+VVWDPWLIVAQIV LQCLYYITLGL LSILVGTRVSR+SLVYFFDYVAITTST+TGWCVIASFLLSS++GAVY+FYLIERS+KCLDFSAT+YIVHLFICIVYGGWPSSITWWIVNG+GIAVMALLGERLCMKRELQEISLTRFRSNV
Sbjct:    1 MFYGSVVWDPWLIVAQIVCLQCLYYITLGLFLSILVGTRVSRLSLVYFFDYVAITTSTITGWCVIASFLLSSLAGAVYVFYLIERSKKCLDFSATIYIVHLFICIVYGGWPSSITWWIVNGTGIAVMALLGERLCMKRELQEISLTRFRSNV 152

[Close]

BLAST of PvulFLAVERTChr10.1663 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445JHP9|A0A445JHP9_GLYSO (Protein SYS1-like isoform C OS=Glycine soja OX=3848 GN=D0Y65_021144 PE=3 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 5.801e-98
Identity = 141/152 (92.76%), Postives = 150/152 (98.68%), Query Frame = 0

Query:    1 MFYGAVVWDPWLIVAQIVGLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVSGAVYMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRSNV 152
            MFYG+VVWDPWLIVAQIV LQCLYYITLGL LSILVGTRVSR+SLVYFFDYVAITTST+TGWCVIASFLLSS++GAVY+FYLIERS+KCLDFSAT+YIVHLFICIVYGGWPSSITWWIVNG+GIAVMALLGERLCMKRELQEISLTRFRSNV
Sbjct:    1 MFYGSVVWDPWLIVAQIVCLQCLYYITLGLFLSILVGTRVSRLSLVYFFDYVAITTSTITGWCVIASFLLSSLAGAVYVFYLIERSKKCLDFSATIYIVHLFICIVYGGWPSSITWWIVNGTGIAVMALLGERLCMKRELQEISLTRFRSNV 152

[Close]

BLAST of PvulFLAVERTChr10.1663 vs. ExPASy TrEMBL (2024)
Match: tr|I1KG80|I1KG80_SOYBN (Protein SYS1 homolog OS=Glycine max OX=3847 GN=100783390 PE=3 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 4.666e-97
Identity = 142/152 (93.42%), Postives = 149/152 (98.03%), Query Frame = 0

Query:    1 MFYGAVVWDPWLIVAQIVGLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVSGAVYMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRSNV 152
            MFYG+VVWDPWLIVAQIV LQCLYYITLGL LSILVGTRVSR+SLVYFFDYVAITTSTVTGWCVIASFLLSSV+GAVY+F LIERS+KCLDFSAT+YIVHLFICIVYGGWPSSITWWIVNG+GIAVMALLGERLCMKRELQEISLTRFRSNV
Sbjct:    1 MFYGSVVWDPWLIVAQIVCLQCLYYITLGLFLSILVGTRVSRLSLVYFFDYVAITTSTVTGWCVIASFLLSSVAGAVYVFCLIERSKKCLDFSATVYIVHLFICIVYGGWPSSITWWIVNGTGIAVMALLGERLCMKRELQEISLTRFRSNV 152

[Close]

BLAST of PvulFLAVERTChr10.1663 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86SBU2|A0AA86SBU2_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS14647 PE=4 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 1.341e-96
Identity = 140/151 (92.72%), Postives = 148/151 (98.01%), Query Frame = 0

Query:    1 MFYGAVVWDPWLIVAQIVGLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVSGAVYMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRSN 151
            MFYG VVWDPWLIVAQIV LQCLYYITLGLLLSILVGTRVSRMSLVYFFD+VAITTSTVTGWCVIASFLLSSV+GAVYMFYLIERSRKCLDFSATLYI+HLFICIVYGGWPSSITWW+VNGSG+AVM+LLGERLC+KRE QEISLTRFRS+
Sbjct:    1 MFYGTVVWDPWLIVAQIVCLQCLYYITLGLLLSILVGTRVSRMSLVYFFDFVAITTSTVTGWCVIASFLLSSVAGAVYMFYLIERSRKCLDFSATLYIIHLFICIVYGGWPSSITWWVVNGSGVAVMSLLGERLCIKRERQEISLTRFRSS 151

[Close]

BLAST of PvulFLAVERTChr10.1663 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q55E69|SYS1_DICDI (Protein SYS1 homolog OS=Dictyostelium discoideum OX=44689 GN=sys1 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.685e-38
Identity = 62/150 (41.33%), Postives = 97/150 (64.67%), Query Frame = 0

Query:    1 MFYGAVVWDPWLIVAQIVGLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVSGAVYMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRS 150
            MFY    WDP LI+ QI+ +QCLYYI L  +L +L     S +SL   F+Y +I T + +G  V+ +FL++S+ G+  + Y++ERS+KCLD SAT+  +H  I  +  G+P ++ WW +   G+ +MA++GE LCM++EL +I L R + 
Sbjct:    1 MFYKYNAWDPKLIIGQILSIQCLYYILLAGILYLLDSMFSSSLSLEQMFEYQSINTHSQSGRVVMTAFLINSLFGSFCLKYIVERSKKCLDHSATVTFIHFIIVWIVSGFPKTVVWWAIQLIGMVIMAMIGEYLCMRKELMDIPLQRGKD 150

[Close]

BLAST of PvulFLAVERTChr10.1663 vs. ExPASy Swiss-Prot (2024)
Match: sp|A7S6Y0|SYS1_NEMVE (Protein SYS1 homolog OS=Nematostella vectensis OX=45351 GN=sys1 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 8.814e-35
Identity = 58/140 (41.43%), Postives = 100/140 (71.43%), Query Frame = 0

Query:    7 VWDPWLIVAQIVGLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVSGAVYMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLT 146
            VWDP LI++QI+ +QC +YI+LG+ + I+     S  SL  FF Y  +  S++ G  ++ +F L+S++GA+ ++++++R+++CLDF+ T +IVHL  C +Y G+P S TWW++N   +A+MA++GE +CMK EL+ I ++
Sbjct:    9 VWDPVLIISQIIAIQCTFYISLGVWVLIVDYWSGSIHSLDQFFAYKELDISSLKGKLLMIAFCLNSLTGAMALWFIVKRAKQCLDFTTTAHIVHLVFCCIYAGFPFSWTWWLLNIICLALMAVIGEFVCMKTELKAIKVS 148

[Close]

BLAST of PvulFLAVERTChr10.1663 vs. ExPASy Swiss-Prot (2024)
Match: sp|A4K2W1|SYS1_PONAB (Protein SYS1 homolog OS=Pongo abelii OX=9601 GN=SYS1 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.727e-32
Identity = 64/152 (42.11%), Postives = 98/152 (64.47%), Query Frame = 0

Query:    3 YGAVVWDPWLIVAQIVGLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVSGAVYMFYLIERSRKCLDFSATLYIVHLFICIVYGG-WPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRF-RSNV 152
            + + VWDP LI++QIV +Q +YY +LGL L+++ G   S  SL   FD   +  ST  G   + SF+L++++ A+ + Y I R ++CLDF+ T++  HL  C  Y   +PS++TWW+V    IA+MA++GE LCM+ EL+EI L    +SNV
Sbjct:    5 FRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGRLSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWLVQAVCIALMAVIGEYLCMRTELKEIPLNSAPKSNV 156

[Close]

BLAST of PvulFLAVERTChr10.1663 vs. ExPASy Swiss-Prot (2024)
Match: sp|A4K2N5|SYS1_PAPAN (Protein SYS1 homolog OS=Papio anubis OX=9555 GN=SYS1 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.727e-32
Identity = 64/152 (42.11%), Postives = 98/152 (64.47%), Query Frame = 0

Query:    3 YGAVVWDPWLIVAQIVGLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVSGAVYMFYLIERSRKCLDFSATLYIVHLFICIVYGG-WPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRF-RSNV 152
            + + VWDP LI++QIV +Q +YY +LGL L+++ G   S  SL   FD   +  ST  G   + SF+L++++ A+ + Y I R ++CLDF+ T++  HL  C  Y   +PS++TWW+V    IA+MA++GE LCM+ EL+EI L    +SNV
Sbjct:    5 FRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGRLSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWLVQAVCIALMAVIGEYLCMRTELKEIPLNSAPKSNV 156

[Close]

BLAST of PvulFLAVERTChr10.1663 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8N2H4|SYS1_HUMAN (Protein SYS1 homolog OS=Homo sapiens OX=9606 GN=SYS1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.727e-32
Identity = 64/152 (42.11%), Postives = 98/152 (64.47%), Query Frame = 0

Query:    3 YGAVVWDPWLIVAQIVGLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVSGAVYMFYLIERSRKCLDFSATLYIVHLFICIVYGG-WPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRF-RSNV 152
            + + VWDP LI++QIV +Q +YY +LGL L+++ G   S  SL   FD   +  ST  G   + SF+L++++ A+ + Y I R ++CLDF+ T++  HL  C  Y   +PS++TWW+V    IA+MA++GE LCM+ EL+EI L    +SNV
Sbjct:    5 FRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGRLSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWLVQAVCIALMAVIGEYLCMRTELKEIPLNSAPKSNV 156

[Close]

BLAST of PvulFLAVERTChr10.1663 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q78S06|SYS1_MOUSE (Protein SYS1 homolog OS=Mus musculus OX=10090 GN=Sys1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.417e-31
Identity = 63/152 (41.45%), Postives = 99/152 (65.13%), Query Frame = 0

Query:    3 YGAVVWDPWLIVAQIVGLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVSGAVYMFYLIERSRKCLDFSATLYIVHLFICIVYGG-WPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRF-RSNV 152
            + + VWDP LI++QIV +Q +YY +LGL L+++     S  SL   FD   +  ST  G   + SF+L++++ A+ + Y I R ++CLDF+ T++  HL  C +Y   +PS++TWW+V    IA+MA++GE LCM+ EL+EI L+   +SNV
Sbjct:    5 FRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDALVRSSPSLDQMFDAEILGFSTPPGRLSMMSFVLNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWLYSSRFPSALTWWLVQAVCIALMAVIGEYLCMRTELKEIPLSSAPKSNV 156

[Close]

BLAST of PvulFLAVERTChr10.1663 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q1RMQ3|SYS1_BOVIN (Protein SYS1 homolog OS=Bos taurus OX=9913 GN=SYS1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.095e-31
Identity = 61/145 (42.07%), Postives = 94/145 (64.83%), Query Frame = 0

Query:    3 YGAVVWDPWLIVAQIVGLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVSGAVYMFYLIERSRKCLDFSATLYIVHLFICIVYGG-WPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLT 146
            + + VWDP LI++QIV +Q +YY +LGL L+++ G   S  SL   FD   +  ST  G     SF+L++++ A+ + Y I R ++CLDF+ T++  HL  C +Y   +PS++TWW+V    IA+MA++GE LCM+ EL+EI L 
Sbjct:    5 FRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVHSSPSLDQVFDAEILGFSTPPGRLSTMSFVLNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWLYSSRFPSALTWWLVQAVCIALMAVIGEYLCMRSELKEIPLN 149

[Close]

BLAST of PvulFLAVERTChr10.1663 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:30084522-30085194 FORWARD LENGTH=152)

HSP 1 Score: 230.335 bits (586), Expect = 1.016e-78
Identity = 106/152 (69.74%), Postives = 126/152 (82.89%), Query Frame = 0

Query:    1 MFYGAVVWDPWLIVAQIVGLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVSGAVYMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRSNV 152
            MFYG  VWDPWLIV QI+ LQC YY+TLGL   + +G RV R+SLVYFFDY  +TTST TGW VIASFL SS++GAVYM +L+ER+RKCLDFSATLYI+HLF CI+YGGWPSS+ WW+VNG+G+AVMALL E LC+KRE +EI + RF S V
Sbjct:    1 MFYGTAVWDPWLIVGQIICLQCSYYLTLGLFTMVFLGLRVPRLSLVYFFDYATLTTSTFTGWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCIMYGGWPSSMAWWVVNGTGLAVMALLAEYLCIKREQREIPMDRFHSRV 152

[Close]

Query:    1 MFYGAVVWDPWLIVAQIVGLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVSGAVYMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRSNV 152
            MFYG  VWDPWLIV QI+ LQC YY+TLGL   + +G RV R+SLVYFFDY  +TTST TGW VIASFL SS++GAVYM +L+ER+RKCLDFSATLYI+HLF CI+YGGWPSS+ WW+VNG+G+AVMALL E LC+KRE +EI + RF S V
Sbjct:    1 MFYGTAVWDPWLIVGQIICLQCSYYLTLGLFTMVFLGLRVPRLSLVYFFDYATLTTSTFTGWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCIMYGGWPSSMAWWVVNGTGLAVMALLAEYLCIKREQREIPMDRFHSRV 152

[Close]

Query:    1 MFYGAVVWDPWLIVAQIVGLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAITTSTVTGWCVIASFLLSSVSGAVYMFYLIERSRKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRSNV 152
            MFYG  VWDPWLIV QI+ LQC YY+TLGL   + +G RV R+SLVYFFDY  +TTST TGW VIASFL SS++GAVYM +L+ER+RKCLDFSATLYI+HLF CI+YGGWPSS+ WW+VNG+G+AVMALL E LC+KRE +EI + RF S V
Sbjct:    1 MFYGTAVWDPWLIVGQIICLQCSYYLTLGLFTMVFLGLRVPRLSLVYFFDYATLTTSTFTGWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCIMYGGWPSSMAWWVVNGTGLAVMALLAEYLCIKREQREIPMDRFHSRV 152

The following BLAST results are available for this feature:

BLAST of PvulFLAVERTChr10.1663 vs. ExPASy TrEMBL (2024)
BLAST of PvulFLAVERTChr10.1663 vs. ExPASy Swiss-Prot (2024)
BLAST of PvulFLAVERTChr10.1663 vs. Araport11

BLAST of PvulFLAVERTChr10.1663 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
tr\|V7AQ64\|V7AQ64_PHAVU	2.500e-102	99.34	Protein SYS1 homolog OS=Phaseolus vulgaris OX=3885...	[more]
tr\|A0A0L9T9V7\|A0A0L9T9V7_PHAAN	2.953e-101	97.37	Protein SYS1 homolog OS=Phaseolus angularis OX=391...	[more]
tr\|A0A1S3VDE5\|A0A1S3VDE5_VIGRR	2.953e-101	97.37	Protein SYS1 homolog isoform X2 OS=Vigna radiata v...	[more]
tr\|A0A0S3T0M0\|A0A0S3T0M0_PHAAN	7.456e-100	96.69	Protein SYS1 homolog OS=Vigna angularis var. angul...	[more]
tr\|A0A8T0JQ61\|A0A8T0JQ61_PHAAN	7.456e-100	96.69	Protein SYS1 homolog OS=Phaseolus angularis OX=391...	[more]
tr\|A0A3Q0FHI0\|A0A3Q0FHI0_VIGRR	7.610e-100	96.69	Protein SYS1 homolog isoform X1 OS=Vigna radiata v...	[more]
tr\|I1KV88\|I1KV88_SOYBN	5.801e-98	92.76	Protein SYS1 homolog OS=Glycine max OX=3847 GN=100...	[more]
tr\|A0A445JHP9\|A0A445JHP9_GLYSO	5.801e-98	92.76	Protein SYS1-like isoform C OS=Glycine soja OX=384...	[more]
tr\|I1KG80\|I1KG80_SOYBN	4.666e-97	93.42	Protein SYS1 homolog OS=Glycine max OX=3847 GN=100...	[more]
tr\|A0AA86SBU2\|A0AA86SBU2_9FABA	1.341e-96	92.72	Uncharacterized protein OS=Sphenostylis stenocarpa...	[more]

BLAST of PvulFLAVERTChr10.1663 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot)
Total hits: 7

Position :

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Match Name	E-value	Identity	Description
sp\|Q55E69\|SYS1_DICDI	2.685e-38	41.33	Protein SYS1 homolog OS=Dictyostelium discoideum O...	[more]
sp\|A7S6Y0\|SYS1_NEMVE	8.814e-35	41.43	Protein SYS1 homolog OS=Nematostella vectensis OX=...	[more]
sp\|A4K2W1\|SYS1_PONAB	3.727e-32	42.11	Protein SYS1 homolog OS=Pongo abelii OX=9601 GN=SY...	[more]
sp\|A4K2N5\|SYS1_PAPAN	3.727e-32	42.11	Protein SYS1 homolog OS=Papio anubis OX=9555 GN=SY...	[more]
sp\|Q8N2H4\|SYS1_HUMAN	3.727e-32	42.11	Protein SYS1 homolog OS=Homo sapiens OX=9606 GN=SY...	[more]
sp\|Q78S06\|SYS1_MOUSE	1.417e-31	41.45	Protein SYS1 homolog OS=Mus musculus OX=10090 GN=S...	[more]
sp\|Q1RMQ3\|SYS1_BOVIN	2.095e-31	42.07	Protein SYS1 homolog OS=Bos taurus OX=9913 GN=SYS1...	[more]

BLAST of PvulFLAVERTChr10.1663 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11)
Total hits: 3

Position :

Zoom :

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Match Name	E-value	Identity	Description
\|	1.016e-78	69.74	Symbols: no symbol available \| no full name availa...	[more]
\|	1.016e-78	69.74	Symbols: no symbol available \| no full name availa...	[more]
\|	1.016e-78	69.74	Symbols: no symbol available \| no full name availa...	[more]

InterPro

Analysis Name: Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL
Date Performed: 2024-08-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019185	Integral membrane protein SYS1-related	PFAM	PF09801	SYS1	coord: 6..145 e-value: 7.4E-41 score: 151.1
IPR019185	Integral membrane protein SYS1-related	PANTHER	PTHR12952	SYS1	coord: 1..150

Analysis Name: InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0
Date Performed: 2024-08-19

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019185	Integral membrane protein SYS1-related	PFAM	PF09801	SYS1	coord: 6..145 e-value: 7.4E-41 score: 151.1
IPR019185	Integral membrane protein SYS1-related	PANTHER	PTHR12952	SYS1	coord: 1..150

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr10:43571704..43578316+
coding sequence from alignment at Chr10:43571704..43578316+

mRNA sequence

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr10.1663 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr10.1663; Name=PvulFLAVERTChr10.1663; organism=Phaseolus vulgaris; type=mRNA; length=3489bp
CTAAAACGACACTTTGTAGTTTCAACTTCAATGCTTAGTGAAATTGTGTG
CAATTGTTCTTCCAAAATTTTCATCTGTGGCCATCACCGTTGGAGAACAC
TCCAATTTTCTCTCCAACAGCAATTCGTTCTTACCCTTCTCAATTTTCGG
CTTCTACTCCCAATCTTCGATTTTCCCCGTGAAAAGTTACCGCTTCCAGA
ATCCAGATCTGAGTGTGCAGGAACCACCGTTTGCATTTGGGTAACCTTGA
TTTGGGTTTTAAAGTGCTTTAAGGAAACTGGGGTCTCTAAATTCTGTACC
TTTTGTCGAATGACGAGTAGTGTGGCTCCAATTGCGGAGATTTGGATTAC
TGGGTTGCTGCTGTAGTGGAGGAAGTTTGAGAATTGGTTTCGATTTGTTT
GAGGAGGTTTTCTGGGAGGACTAGGTTTTTGTGAGGGAGTTTGTCTGGTC
GGCGTCATGTTCTATGGTGCGGTGGTATGGGACCCTTGGCTTATTGTTGC
TCAAATTGTGGGTCTTCAATGTTTGTACTATATCACCCTGGGGTTGCTCT
TGTCGATACTTGTTGGCACGCGTGTGTCTCGGATGAGTCTCGTTTATTTC
TTTGACTATGTTGCCATTACCACCTCCACCGTTACTGGTTGGTGTGTTAT
TGCTTCATTTCTGCTCAGTTCAGTTTCAGGGGCggtatatatgttttatt
tgatTGAAAGATCACGAAAGTGCTTGGATTTTTCAGCCACACTCTACATT
GTCCATCTCTTTATATGCATTGTGTATGGGGGTTGGCCCTCCTCTATAAC
ATGGTGGATTGTGAATGGTTCTGGAATTGCAGTGATGGCCTTGCTTGGTG
AACGTCTGTGCATGAAGCGGGAACTCCAGGAGATATCATTAACACGATTT
CGTTCAAATGTTTGATTGGCTGAAGTACATTTTTCAAGAAAGAAGTGCTG
CAGGATGGTAACCACTTTTGCTTCTTTATATTGGATGATCTACAAGATAC
AGCCCAAGAAGTGAATAATTCTATTCTGCGGTTAAAAAACctacattttc
ttttaattctttaGTTGCAATAGAAATGAAACATATAACCAGACGAGATT
AGGTACATAATTTTCAGGAATTACTGGAAGTCTtgatgtaatttatttat
attctatttttgatTTTCCCTCCCTTTGGTGTTGTTGGTTAAGGTGATGC
ATTAGTTGATAGGATTTCTATTCTTTTTACTCTTTTTGTGAGTTTTCGCT
TCTGTTTGCAGTCTTGGAATTATATGTTACTTCTTTCTGTCCCATTACTT
TTATCGAGGTTGGTATATCAGGTAGCAGATTGAACCTCTTcgtcaaattt
atttatttataactatttattGATTGATAAATTTGCACCACATTTTTGGT
CGATCTTCCTCTACATAGTTTAATTGCTAATGTTACATTGTCCATGTAGT
TCCTTATTAAAGGAATGAGAATTAAACCATTATGTAATCATCTTGTCATG
GGAATGAAGCTTGTTAAAGTAACCTACTAGTGGGATTACTTTATTTATAC
GTGTAGGCATTGGAAGCACTGGCTCCGCTAACAATCGCTTTCCCTTTTGT
TAGTGTGAggtcttttttttcaaattgggAAAACTTAACATTTGTGttag
gaaaaaggaaaaagaatatAGTCATATCAGCAAAAAAGAAGATTGGAACG
CTCGTCTTTTATTCCTTCTTTAATCTcaaaatatctataatattaTCATT
GTCAACAGAATAAAGtcatctcaatgtgttttgctTGGATGCTCTTCTGA
AACAACAAAAGCCTTGGTTTGTCAAGGTTTTTGCTAGCAAAGTAGCCGGA
GAGATTCTGAAAGAAGTTAGAAGCCTCATCTTTTTCCTTTTGTACTTGAA
ATTCATCTATGGAATTCAAGGCTGAGCTTTCCAGGAGGATGAAATGTCAG
CCACAGCTTCTCCAACTGTGAGATAGACACCTTTCAACCCAAAGGAATCT
AAAATATTTGAGTGATGCAACTTTTCCATCACATTTCCAACAGGATTTGC
CAACACAAGCTGCACCAACGAATTATGAATATAAGTATTTGAAATAAAAC
TGATGGAAGTCTCTATGGCCTTATAAAATGTTACAGATAGTATCTATACC
TGAAGTGATCTTTTGTCCAGCACCTTTCTAAGCTCACATAGAGTATCGAT
TCCACTTGTGTCTATGGCTGTAACAGCTGgggaaagaaaataagaaatta
ttctTTTCAGTCAGAAGTATCTCAAAActtgaataaaaaaactttaagtC
AGAAGAAATGCATACCTGTCATGTCCAAAATTATACACTTCAATGCACTT
TCATCGTTTGCTTTTACTCGCTCTTCCTCTTCTCGAACCCATCTCAGTAT
CCTATAGCAGGAAAAGCACTCAAGTGGTTAGAATCTCATAATCACTCAGA
AAATGCctctaaaaaaatcattgaaatgTTCTAAACATTTACAAAATTAC
AATCTATAAGTCGCTTTATCTAACCTTTCTTGCAGGTACGTTGAATTAGC
AAAGTAGATAGGAGACTCAACAGCCAAAATGAGAAATGAAGGAATCCTCA
AAGCTTCTCTATATTGGTTTAGGTTGTGGAATATTGGCGTCCCCGGTATA
TTCCCCAAAACCAGTGTGTTTGGCCTAGAGACATTAAGCAAGATCTTGAA
GACTGATATTCCCACCTGAAGATTTTGGCCAAGCCAGTAATATTAATCAC
ATAGCATCAACATACAATGTATTTTAGATTTCTAATAACAGGAAACAGAT
TAAATTATTCCTAGCTTACCGCTATTCCAAGGCCTAGAGGCACTGAAATG
AACAGAACACCGAAAAAGGAGCACAAGCAGGCCAAGAAGTCAAGCTTGTC
AACCTTCCACAATTTATATGCAGCTTGATAATCTATTAGCCCTACAACAG
CAGTGATGATAATGGCTGCTAAGACTACATTCGGTGTGTAATGGAACAGC
GGCATCAGAAACAAAAGGGTCACAAGAACTGCTGATGCCATGATTATATT
TGATACTGCTGTCTGTGCCCCAGCATTGAAGTTAACAGCTGATCGAGAAA
ATGACCCTGCAAGTTTATTTTAATGTCAGAATGGACATTTTCTCAACTTC
CATCTCTTCAATAACTTAACTACTAGTAAATTGTCAATCACGTGGTCAAA
TGAGAGAAGAATCATTACCTGTTGTGACGTAGCATGAAGAACAAGAACCA
GCTATGTTCATAAGACCAATGGCCATCATTTCTTTGTTTCCATCCACCTG
GTAGTTCTTCAGTGCAGCAAATGTTCTTCCCACTGCAATTCCTTCCTGAA
ACAGAAGAAAATAGCTGTTGAGTTATATGGTGTATTGTGTGTGTATGCTT
GCTTATATGGTGTATTCTGTAGTCATTATGTTTCTCAGTTTGGGACAACA
TACAGTGAGAGACAAAATCCCAGTGACAAGCCCTGTTTT

protein sequence of drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr10.1663

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr10.1663 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr10.1663; Name=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr10.1663; organism=Phaseolus vulgaris; type=polypeptide; length=152bp
MFYGAVVWDPWLIVAQIVGLQCLYYITLGLLLSILVGTRVSRMSLVYFFD
YVAITTSTVTGWCVIASFLLSSVSGAVYMFYLIERSRKCLDFSATLYIVH
LFICIVYGGWPSSITWWIVNGSGIAVMALLGERLCMKRELQEISLTRFRS
NV

mRNA from alignment at Chr10:43571704..43578316+

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr10.1663 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr10.1663; Name=PvulFLAVERTChr10.1663; organism=Phaseolus vulgaris; type=mRNA; length=6613bp; location=Sequence derived from: Chr10:43571704..43578316+ (Phaseolus vulgaris
CTAAAACGACACTTTGTAGTTTCAACTTCAATGCTTAGTGAAATTGTGTG
CAATTGTTCTTCCAAAATTTTCATCTGTGGCCATCACCGTTGGAGAACAC
TCCAATTTTCTCTCCAACAGCAATTCGTTCTTACCCTTCTCAATTTTCGG
CTTCTACTCCCAATCTGTAATTTCCCCTCACTCTCCCTCTATTCCTCTCA
CTGTTACTACAAAGTTGGAATCTCTCTCTTCAATTTCCCGTAAGATAAAT
CGATCACGAACTTATATTGATTTGTTTTTCTCATGCTGATCTTATTTTTC
AGTCGATTTTCCCCGTGAAAAGTTACCGCTTCCAGAATCCAGATCTGAGT
GTGCAGGAACCACCGTTTGCATTTGGGTAACCTTGATTTGGGTTTTAAAG
TGCTTTAAGGAAACTGGGGTCTCTAAATTCTGTACCTTTTGTCGAATGAC
GAGTAGTGTGGCTCCAATTGCGGAGATTTGGATTACTGGGTTGCTGCTGT
AGTGGAGGAAGTTTGAGAATTGGTTTCGATTTGTTTGAGGAGGTTTTCTG
GGAGGACTAGGTTTTTGTGAGGGAGTTTGTCTGGTCGGCGTCATGTTCTA
TGGTGCGGTGGTATGGGACCCTTGGCTTATTGTTGCTCAAATTGTGGGTC
TTCAATGTTTGTACTATATCACCCTGGGGTTGCTCTTGTCGATACTTGTT
GGCACGCGTGTGTCTCGGATGAGTCTCGTTTATTTCTTTGACTATGTTGC
CATTACCACCTCCACCGTTACTGGTTGGTGTGTTATTGCTTCATTTCTGC
TCAGTTCAGTTTCAGGGTAATTGTTTTTTTACACCTTAAATAAAATGTTT
GAATTTGTCATTAGTTGGCCTATAATTGATTACTGATTGTGAGTTGTGAC
TCTACTTCCCTGTAGTGTATcgtaatttttaatttactgGTTAGAAGGTT
GCTTTCATTATTTACTTATTCTATTGATTGCTTCCTGAAGTTTCTGAACA
AACCTTTAGCATTTTTGTAACCATGTATTTAGCATATTTTCCTCTTTCCT
TCatcattttcctttttggtTTGGTTTAGCAGCTTTCTGCCTCTAAGCTT
ATGAATGAATGTTCATTGTTAAAGCCGTTTGAGTGATTGTTCTCCTTGTG
TTGGACTGATTGTGCTGTATTCTAGAGtaggaaaagaaacaaaaattaca
ctTGGGACCTTTGAGATAGTTGTGTCTTTAATTTGGAATTTTAAGTTCTC
TTTCTATCAATGCTTTTGGAATGTTAAAGAAACGATATTTGATTTGTAAA
TTAGACCCTGTTAGGAATGTTACTAAATAAGAAATCagaaataatatgtt
tttttttttctaaatctagtggaattatttgttttatatttagaaattcT
GTCCAATGTTGTGTTTGTTCTGTGATTATTTTTAGTGGGAGGATTGAACC
AAAGGAGGCATTCTTAGCTGTTGGGTTACGGCTTCTGTGCACTATTTGCT
CAAATTATGTTGTAGACATTGTTCTTATGCCACTATTTTTGTATGCAGGG
CggtatatatgttttatttgatTGAAAGATCACGAAAGTGCTTGGATTTT
TCAGCCACACTCTACATTGTCCATCTCTTTATATGCATTGTGTATGGGGG
TTGGCCCTCCTCTATAACATGGTGGATTGTGAATGGTTCTGGAATTGCAG
TGATGGCCTTGCTTGGTGAACGTCTGTGCATGAAGCGGGAACTCCAGGAG
ATATCATTAACACGATTTCGTTCAAGTAAGAATTTCCTCCTTCGTGTACG
CTTAGCTGGCTAACTGGACATGTGTTGTTTAAAGTTTTGTTTCCTTGTGT
TAtattttatatctatatattgTGCCATATCTTTTATTGTGTTTACTTAT
TTTCAGAAACCTGAATATATGTTCAGGCTGTTAAACTCAATTTGCGTTAG
GCAAAGCATTTGAATACTATATGTATGTTGTGAAGgttgtgctttttttt
ttttctttttcttgccTTTTCCCATTTCGAACATTATCAGAAGGAAAAAC
CTTAATCTATGCACTAAGTTTTATATTCTCATTTCTGTTTGGATATCATG
TTGCattaagttttaagttttaTGCTATTCTCTTTGTTGGTAGCTCATGT
CAGAGCTCCCCCTCTCCAAATAATCAAGCTCTCTGCAATACCAAGTTGAA
TTAGAGTATCTGTATTCCAATTAGATTTAAGGCTGAGATAAAAAGTGTTA
CATATTAGCAAACGACAATTAAATAAAACTCTAGTTTCTGAGTCACCACC
CTATGACACATGTAAAATTCTAGATTATTTCTATTCTATTAGGATACTgc
caatttatattttgttgttaCATTCCCTTTTCATCCTGTTTTGTACTGGG
CAATGTGACAGCCTCTTGGCTCCTGATCCACTGGTATATAGATAGTACTT
TTAGTAATGAAAGAAGGGGAAGAagaattaattttgtttattttagttTG
ACTCCTTACTTGCTTTGGGAACTTCCCCTTGCTTGAAAAGGGTCATTACA
GaactatttttgaaattattgaaAGATCCTTCCTCCAAACCTCCCTCTGA
AATTCACCTACAACTGCCCCACCCCCTCTCTTCACCGTCTCCCTCAAGGC
TGTTAGAGTTTCCGACGTGGTCAAAACCCAAACAAGTGCAAACCTCCTGG
CACCAAGCCTCCAAGCCCTGCTTTAAACCAATACCTCCAATTCAGCCAAT
ACCCCGAGGCTGTGGAACCACCACCGGCATCAAAGGACCAAATTGAAACC
CAGCCATATAGTTGTCGTTGTTCTCTACCCAGCTAGCTAAGCAGCAAACA
GCGGAGGCAGAGAGAAGCAAGTAAACCCCAAACTGATGCCAGTCCAAATT
CCAGCAGGAACAAACCGAAAAAACACCGCTATATCTAAAATTGTTCACAA
AGAACAAATGGGTATGATCCAAACCACACATTTAACCCTAATGcaactaa
taataattataataatgaatgGTTTGTGCAATTTTTTCACCAAAATTGAT
CAATAAGAACGGACAAAGGTTGGGTTAGACATGACACTGACAGTGAGGTA
GGGCAAAGAAGTCTAATTTGTGGGTTTCAGTGCCAGAGGGAATCACTGGA
AAAGAGACATTCTCCTGAAGCGGAGCCCATACAACAATAACAAATGCTTC
ATCCTACAAAGGCAAGGTCAGCTACGTATATCACATGATGACCTCTTTTG
GGTAAAGAGGAGcccatatattttaatatttagtaaatataaggTCTATC
TACGcgaacatattttaatttataaaaagttaCGTTAACCTGTAAGtctt
ttaaaatctatttattcatatattttactaGAAGTAGATCCATACTCCAA
TTGTTGGCTGGAGTGTGGGAGACTATCCTATTGCAAACTGTTTAAACTTG
CAGTCTTTCTGAGTAAGCACCCCTCGAGAACTAAGAATTTTCATTATGTC
AACACTAGCGAAAGACAGAAAGTTTTGCCTGTCTgtcagatttttatttt
ttgcataaattattaaatttaattcttttatcagtttaatgtttttaatt
tgatgtGGAAGTCTCGTAAAGAGTAGTAGATGTTTTGGGTGCAGTTGAAG
GGTAAAGTAGtctaacaatatatatatatatatataacaaatgaGGGTAT
TCCATTTATTATagattatagaaaaatattattatagacTAGGGAATAAG
AGACACTTCATAccttctatatttttaaagaggagaaataaaataagaga
gAGATAAAGAATAGAATACTGGGAAATAAATAATGGTTTACCTAACTAGC
TTTACGGGGGTATAACAAGGCACAAAAATGTGCACTCCAGCACCTTgtat
tcattttatatatactaTAGATATAGATTATCGTTTATAGATAATGATGA
GTCAGAGAGCAATCTGTTTTATATACTGTCCAAAAGATGGTTAACTATTC
CTGTGGCTTAATACTGTCGACTTCCTTGCAGATGTTTGATTGGCTGAAGT
ACATTTTTCAAGAAAGAAGTGCTGCAGGATGGTAACCACTTTTGCTTCTT
TATATTGGATGATCTACAAGATACAGCCCAAGAAGTGAATAATTCTATTC
TGCGGTTAAAAAACctacattttcttttaattctttaGTTGCAATAGAAA
TGAAACATATAACCAGACGAGATTAGGTACATAATTTTCAGGAATTACTG
GAAGTCTtgatgtaatttatttatattctatttttgatTTTCCCTCCCTT
TGGTGTTGTTGGTTAAGGTGATGCATTAGTTGATAGGATTTCTATTCTTT
TTACTCTTTTTGTGAGTTTTCGCTTCTGTTTGCAGTCTTGGAATTATATG
TTACTTCTTTCTGTCCCATTACTTTTATCGAGGTTGGTATATCAGGTAGC
AGATTGAACCTCTTcgtcaaatttatttatttataactatttattGATTG
ATAAATTTGCACCACATTTTTGGTCGATCTTCCTCTACATAGTTTAATTG
CTAATGTTACATTGTCCATGTAGTTCCTTATTAAAGGAATGAGAATTAAA
CCATTATGTAATCATCTTGTCATGGGAATGAAGCTTGTTAAAGTAACCTA
CTAGTGGGATTACTTTATTTATACGTGTAGGCATTGGAAGCACTGGCTCC
GCTAACAATCGCTTTCCCTTTTGTTAGTGTGAggtcttttttttcaaatt
gggAAAACTTAACATTTGTGttaggaaaaaggaaaaagaatatAGTCATA
TCAGCAAAAAAGAAGATTGGAACGCTCGTCTTTTATTCCTTCTTTAATCT
caaaatatctataatattaTCATTGTCAACAGAATAAAGtcatctcaatg
tgttttgctTGGATGCTCTTCTGAAACAACAAAAGCCTTGGTTTGTCAAG
GTTTTTGCTAGCAAAGTAGCCGGAGAGATTCTGAAAGAAGTTAGAAGCCT
CATCTTTTTCCTTTTGTACTTGAAATTCATCTATGGAATTCAAGGCTGAG
CTTTCCAGGAGGATGAAATGTCAGCCACAGCTTCTCCAACTGTGAGATAG
ACACCTTTCAACCCAAAGGAATCTAAAATATTTGAGTGATGCAACTTTTC
CATCACATTTCCAACAGGATTTGCCAACACAAGCTGCACCAACGAATTAT
GAATATAAGTATTTGAAATAAAACTGATGGAAGTCTCTATGGCCTTATAA
AATGTTACAGATAGTATCTATACCTGAAGTGATCTTTTGTCCAGCACCTT
TCTAAGCTCACATAGAGTATCGATTCCACTTGTGTCTATGGCTGTAACAG
CTGgggaaagaaaataagaaattattctTTTCAGTCAGAAGTATCTCAAA
ActtgaataaaaaaactttaagtCAGAAGAAATGCATACCTGTCATGTCC
AAAATTATACACTTCAATGCACTTTCATCGTTTGCTTTTACTCGCTCTTC
CTCTTCTCGAACCCATCTCAGTATCCTATAGCAGGAAAAGCACTCAAGTG
GTTAGAATCTCATAATCACTCAGAAAATGCctctaaaaaaatcattgaaa
tgTTCTAAACATTTACAAAATTACAATCTATAAGTCGCTTTATCTAACCT
TTCTTGCAGGTACGTTGAATTAGCAAAGTAGATAGGAGACTCAACAGCCA
AAATGAGAAATGAAGGAATCCTCAAAGCTTCTCTATATTGGTTTAGGTTG
TGGAATATTGGCGTCCCCGGTATATTCCCCAAAACCAGTGTGTTTGGCCT
AGAGACATTAAGCAAGATCTTGAAGACTGATATTCCCACCTGAAGATTTT
GGCCAAGCCAGTAATATTAATCACATAGCATCAACATACAATGTATTTTA
GATTTCTAATAACAGGAAACAGATTAAATTATTCCTAGCTTACCGCTATT
CCAAGGCCTAGAGGCACTGAAATGAACAGAACACCGAAAAAGGAGCACAA
GCAGGCCAAGAAGTCAAGCTTGTCAACCTTCCACAATTTATATGCAGCTT
GATAATCTATTAGCCCTACAACAGCAGTGATGATAATGGCTGCTAAGACT
ACATTCGGTGTGTAATGGAACAGCGGCATCAGAAACAAAAGGGTCACAAG
AACTGCTGATGCCATGATTATATTTGATACTGCTGTCTGTGCCCCAGCAT
TGAAGTTAACAGCTGATCGAGAAAATGACCCTGCAAGTTTATTTTAATGT
CAGAATGGACATTTTCTCAACTTCCATCTCTTCAATAACTTAACTACTAG
TAAATTGTCAATCACGTGGTCAAATGAGAGAAGAATCATTACCTGTTGTG
ACGTAGCATGAAGAACAAGAACCAGCTATGTTCATAAGACCAATGGCCAT
CATTTCTTTGTTTCCATCCACCTGGTAGTTCTTCAGTGCAGCAAATGTTC
TTCCCACTGCAATTCCTTCCTGAAACAGAAGAAAATAGCTGTTGAGTTAT
ATGGTGTATTGTGTGTGTATGCTTGCTTATATGGTGTATTCTGTAGTCAT
TATGTTTCTCAGTTTGGGACAACATACAGTGAGAGACAAAATCCCAGTGA
CAAGCCCTGTTTT

Coding sequence (CDS) from alignment at Chr10:43571704..43578316+

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr10.1663 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr10.1663; Name=PvulFLAVERTChr10.1663; organism=Phaseolus vulgaris; type=CDS; length=459bp; location=Sequence derived from: Chr10:43571704..43578316+ (Phaseolus vulgaris
ATGTTCTATGGTGCGGTGGTATGGGACCCTTGGCTTATTGTTGCTCAAAT
TGTGGGTCTTCAATGTTTGTACTATATCACCCTGGGGTTGCTCTTGTCGA
TACTTGTTGGCACGCGTGTGTCTCGGATGAGTCTCGTTTATTTCTTTGAC
TATGTTGCCATTACCACCTCCACCGTTACTGGTTGGTGTGTTATTGCTTC
ATTTCTGCTCAGTTCAGTTTCAGGGGCggtatatatgttttatttgatTG
AAAGATCACGAAAGTGCTTGGATTTTTCAGCCACACTCTACATTGTCCAT
CTCTTTATATGCATTGTGTATGGGGGTTGGCCCTCCTCTATAACATGGTG
GATTGTGAATGGTTCTGGAATTGCAGTGATGGCCTTGCTTGGTGAACGTC
TGTGCATGAAGCGGGAACTCCAGGAGATATCATTAACACGATTTCGTTCA
AATGTTTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR019185	Integral_membrane_SYS1-rel

Search form

PvulFLAVERTChr10.1663