PvulFLAVERTChr11.1000482

Transcript Overview


Name	PvulFLAVERTChr11.1000482
Unique Name	drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000482
Type	mRNA
Organism	Phaseolus vulgaris (Common bean)
Sequence length	447

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr11	chromosome	Chr11:7336843..7337289 -	Phaseolus vulgaris cv. Flavert genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Phaseolus vulgaris cv. Flavert genome v1.0	2024-07-01
Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL	2024-08-19
Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot	2024-08-19
Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11	2024-08-19
InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0	2024-08-19

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
pvfpvfL004	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
pvfpvfR125	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
pvfvfhR146	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
pvfvrvR132	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
pvpvfL009	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
pvfvfhR194	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
pvfvfhR200	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
pvfvrvR152	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
pvfvfhR207	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
pvfvssR152	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
pvfvssR155	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
pvfvuR138	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
pvfvuR141	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
pvpvfL121	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
pvfvuR161	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
pvpvfL444	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris

Orthologs


Gene/Transcript	Assembly	Species
jg43667.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
rna-XM_014638415.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
PvulFLAVERTChr11.1000482	drPhaVulg.Flavert.1.0gene:PvulFLAVERTChr11.1000482	Phaseolus vulgaris	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000482.1	drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000482.1	Phaseolus vulgaris	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000482.1	drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000482.1	Phaseolus vulgaris	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000482	drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000482	Phaseolus vulgaris	polypeptide
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000482	drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000482-protein	Phaseolus vulgaris	polypeptide

Homology

[Close]

BLAST of PvulFLAVERTChr11.1000482 vs. ExPASy TrEMBL (2024)
Match: tr|V7AG19|V7AG19_PHAVU (FAS1 domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G074600g PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 1.566e-85
Identity = 140/147 (95.24%), Postives = 142/147 (96.60%), Query Frame = 0

Query:    2 QKVELLQFHTLSSFLSISNFDTLTNPVQTQAGDDPKRLQLNITTYGGSHVSMSTGAVNATITGIVYTDNKLTIYEVDKVLLPLDVVLPKPKAPAPKPHADRSGDSNKNMDDESGVPVEASGGCMNFNRVHVKWMSFVVLMGGAMICM 148
            QKVELLQFHTLSSFLSISNFDTLTNPVQTQAGDDPKRLQLNITTYGGSHVSMSTGAVNATITG VYTD +L IYEVDKVLLPLDVVLPKPKAPAPKPHADRSGDSNKNMDD+SGVPVEASGGCMNF  VHVKWMSFVVLMGGAMICM
Sbjct:  135 QKVELLQFHTLSSFLSISNFDTLTNPVQTQAGDDPKRLQLNITTYGGSHVSMSTGAVNATITGTVYTDKQLAIYEVDKVLLPLDVVLPKPKAPAPKPHADRSGDSNKNMDDDSGVPVEASGGCMNFYSVHVKWMSFVVLMGGAMICM 281

[Close]

BLAST of PvulFLAVERTChr11.1000482 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445I2B7|A0A445I2B7_GLYSO (Fasciclin-like arabinogalactan protein 11 OS=Glycine soja OX=3848 GN=D0Y65_029993 PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 1.431e-69
Identity = 118/158 (74.68%), Postives = 127/158 (80.38%), Query Frame = 0

Query:    2 QKVELLQFHTLSSFLSISNFDTLTNPVQTQAGDDPKRLQLNITTYGGSHVSMSTGAVNATITGIVYTDNKLTIYEVDKVLLPLDVVLPKP----------KAPAPKPHADRSGDSNKNMDDESGVPVEASGGCMNFNRVHVKWMSFV---VLMGGAMI 146
            QKVELLQFHTLSSFLSISNFDTLTNPVQTQAGDD KRLQLN+TTYGGS VSM+TGAVNATITG VYTDNKL +YEVDKVL+PLDVVLPKP          ++P  K  AD SGDSNKN DD+  VPV+AS G MNFN VHV  MSFV   VLM G+MI
Sbjct:  135 QKVELLQFHTLSSFLSISNFDTLTNPVQTQAGDDSKRLQLNVTTYGGSQVSMTTGAVNATITGTVYTDNKLAVYEVDKVLVPLDVVLPKPKAPAPSPSKGESPKTKSSADESGDSNKNSDDDGAVPVDASAGSMNFNSVHVTRMSFVVGFVLMVGSMI 292

[Close]

BLAST of PvulFLAVERTChr11.1000482 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86W653|A0AA86W653_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS31541 PE=4 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 1.598e-61
Identity = 109/161 (67.70%), Postives = 120/161 (74.53%), Query Frame = 0

Query:    2 QKVELLQFHTLSSFLSISNFDTLTNPVQTQAGDDPKRLQLNITTYGGSHVSMSTGAVNATITGIVYTDNKLTIYEVDKVLLPLDVVLPKP----------KAPAPKPHADRSGDSNKNM------DDESGVPVEASGGCMNFNRVHVKWMSFVVLMGGAMI 146
            QKVELLQFHTLSSF+SI NFDTLTNPVQTQAGDDP+RLQLNITTYGG HVSMSTGAVNAT+TG VYTDNKL IYEVDKVLLPLDVVLPKP          ++P  K  AD+SGDSNKN+      D    VP +AS    NFN ++  WMSF+V     MI
Sbjct:  135 QKVELLQFHTLSSFISIPNFDTLTNPVQTQAGDDPQRLQLNITTYGGGHVSMSTGAVNATVTGTVYTDNKLAIYEVDKVLLPLDVVLPKPKAPAPSPSKGESPKRKSSADKSGDSNKNIDDDDDDDGGGAVPADASAASTNFNNINGMWMSFIVGFALMMI 295

[Close]

BLAST of PvulFLAVERTChr11.1000482 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445I1S3|A0A445I1S3_GLYSO (Fasciclin-like arabinogalactan protein 11 OS=Glycine soja OX=3848 GN=D0Y65_029991 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.446e-60
Identity = 102/156 (65.38%), Postives = 119/156 (76.28%), Query Frame = 0

Query:    2 QKVELLQFHTLSSFLSISNFDTLTNPVQTQAGDDPKRLQLNITTYGGSHVSMSTGAVNATITGIVYTDNKLTIYEVDKVLLPLDVVLP----------KPKAPAPKPHADRSGDSNKNMDDESGVPVEASGGCMNF-NRVHVKWMSFVVLMGGAMI 146
            QKVELLQFHTLSSF+SISNFDTLTNPVQTQAGDD +RLQLN+TTYGG+ VSM+TG VNATIT  VY DNKL IYEVDKVLLPLDVVLP          K ++P  K + + SGD NKN DD+  V V AS G +N  N V++ ++  +VLMGGAM+
Sbjct:   89 QKVELLQFHTLSSFVSISNFDTLTNPVQTQAGDDAQRLQLNVTTYGGNQVSMATGVVNATITSTVYLDNKLAIYEVDKVLLPLDVVLPKPKAPAPSPFKGESPKTKSYTEESGDGNKNSDDDGAVTVNASAGSVNLINNVNLMFVVGLVLMGGAML 244

[Close]

BLAST of PvulFLAVERTChr11.1000482 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8KAV0|A0A8B8KAV0_ABRPR (Fasciclin-like arabinogalactan protein 11 OS=Abrus precatorius OX=3816 GN=LOC113854202 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 4.697e-57
Identity = 99/157 (63.06%), Postives = 117/157 (74.52%), Query Frame = 0

Query:    2 QKVELLQFHTLSSFLSISNFDTLTNPVQTQAGDDPKRLQLNITTYGGSHVSMSTGAVNATITGIVYTDNKLTIYEVDKVLLPLDVVLPKPKAPAPKPHADRS--GDSNKNMDDESG--------VPVEA--SGGCMNFNRVH-VKWMSFVVLMGGAM 145
            QKVELLQFHTLSSF+S+SNFDTLTNPVQTQAGDDPKRLQLN+TTYGG+ VSM+TGAV AT+TG VY DNKL IY+VDKVLLPLD VLPK KAP+P P    S   D  K+ +DES         VPV+A  +G  M FN+V  V W+  + ++G  +
Sbjct:  146 QKVELLQFHTLSSFISVSNFDTLTNPVQTQAGDDPKRLQLNVTTYGGTQVSMTTGAVYATVTGTVYADNKLAIYQVDKVLLPLDFVLPKAKAPSPSPAKGVSPKSDKTKSSEDESKNDNGDDGVVPVDANSAGSMMGFNKVEIVMWVPLLWVLGATI 302

[Close]

BLAST of PvulFLAVERTChr11.1000482 vs. ExPASy TrEMBL (2024)
Match: tr|A0A834X9J6|A0A834X9J6_9FABA (Fasciclin-like arabinogalactan protein 11 OS=Senna tora OX=362788 GN=G2W53_002655 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.340e-56
Identity = 102/165 (61.82%), Postives = 116/165 (70.30%), Query Frame = 0

Query:    2 QKVELLQFHTLSSFLSISNFDTLTNPVQTQAGDDPKRLQLNITTYGGSHVSMSTGAVNATITGIVYTDNKLTIYEVDKVLLPLDVVLPKPKAPAP----------------KPHADRSGDSNKNMDDESGVPVEASGGCMNFNRVHVKWMSFVVL----MGGAMI 146
            QKVELLQFHT+SSF+SISNFDTLTNPVQTQAGDDP+RLQLN+TTYGGS VSM+TGAVNAT+TG VYTDNKL IYEVDKVLLPLD VLPK  APAP                 P A+ SGD N  + D +G  V++S   M FN   +  +  +VL     GG MI
Sbjct:  140 QKVELLQFHTISSFISISNFDTLTNPVQTQAGDDPRRLQLNVTTYGGSQVSMTTGAVNATVTGTVYTDNKLAIYEVDKVLLPLDFVLPKAMAPAPTIVATKGDSPKSDEANSPLANDSGDDNDKV-DHAGNTVDSSASSMGFNVDVILQVVPIVLGVAFFGGVMI 303

[Close]

BLAST of PvulFLAVERTChr11.1000482 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6A4PIE6|A0A6A4PIE6_LUPAL (Putative FAS1 domain-containing protein OS=Lupinus albus OX=3870 GN=Lalb_Chr13g0295351 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 8.305e-54
Identity = 97/163 (59.51%), Postives = 120/163 (73.62%), Query Frame = 0

Query:    2 QKVELLQFHTLSSFLSISNFDTLTNPVQTQAGDDPKRLQLNITTYGGSHVSMSTGAVNATITGIVYTDNKLTIYEVDKVLLPLDVVLPKPKAPAPKPHADRSGDSNKNM---------------DDESGVPVEASGGCMNFNRVHVKWMSFVV---LMGGAMI 146
            QKVELLQFHTLSSF+SISNFDTLTNPVQTQAGDD +RLQLN+TT+GG+ VSM+TGAVNATITG VYTD+KL IY+VDKVLLPLD+VLP  KAPA  P A + G  +K                 + +S +P E S G +++ +V + W++FVV   L+G A+I
Sbjct:  160 QKVELLQFHTLSSFISISNFDTLTNPVQTQAGDDAQRLQLNVTTFGGNQVSMATGAVNATITGTVYTDSKLAIYQVDKVLLPLDIVLPS-KAPALAPVAAKKGGLSKTNSSSTDDSGSSIGGGDESDSALPAEISAGYLSY-KVGIMWVNFVVGTGLVGIAII 320

[Close]

BLAST of PvulFLAVERTChr11.1000482 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1J7H8N4|A0A1J7H8N4_LUPAN (FAS1 domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_11288 PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 3.898e-51
Identity = 94/151 (62.25%), Postives = 111/151 (73.51%), Query Frame = 0

Query:    2 QKVELLQFHTLSSFLSISNFDTLTNPVQTQAGDDPKRLQLNITTYGGSHVSMSTGAVNATITGIVYTDNKLTIYEVDKVLLPLDVVLPKPKAPAPKPH----------ADRSGDSNKNMDDESGVPVEAS--GGCMNFNRVHVKWMSFVVL 140
            QKVELLQFHTLSSF+SISNFDTLTNPVQTQAGDD KRLQLN+TTYGGS VSM++GAVNAT+ G VY DNKL IYEV+KVLLPLD+VLPKPKA AP P            D   D +K+ +D+  VPV  S  G     N++ +  ++ V+L
Sbjct:  145 QKVELLQFHTLSSFISISNFDTLTNPVQTQAGDDAKRLQLNVTTYGGSQVSMTSGAVNATVIGTVYADNKLGIYEVNKVLLPLDIVLPKPKALAPSPAKGVSPKTKSPEDERQDGSKSNNDDDVVPVHTSSAGTVYADNKLGIYEVNKVLL 295

HSP 2 Score: 74.3294 bits (181), Expect = 1.404e-12
Identity = 46/100 (46.00%), Postives = 59/100 (59.00%), Query Frame = 0

Query:   58 VNATITGIVYTDNKLTIYEVDKVLLPLDVVLPKPKAPAPKPH----------ADRSGDSNKNMDDESGVPVE-ASGGCMNFNRVHVKWMSFVVLMGGAMI 146
            V+ +  G VY DNKL IYEV+KVLLPLD+VLPKPKA AP P            D   D +K+ +D+  VPV  +S G  +FN +   W+  V+   GAMI
Sbjct:  271 VHTSSAGTVYADNKLGIYEVNKVLLPLDIVLPKPKALAPSPAKGVSPKTKSPEDERQDGSKSNNDDDVVPVHTSSAGSFSFNII---WIPLVL---GAMI 364

[Close]

BLAST of PvulFLAVERTChr11.1000482 vs. ExPASy TrEMBL (2024)
Match: tr|G7ILU0|G7ILU0_MEDTR (Fasciclin domain protein OS=Medicago truncatula OX=3880 GN=11442920 PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 2.332e-49
Identity = 95/158 (60.13%), Postives = 112/158 (70.89%), Query Frame = 0

Query:    2 QKVELLQFHTLSSFLSISNFDTLTNPVQTQAGDDPKRLQLNITTYGGSHVSMSTGAVNATITGIVYTDNKLTIYEVDKVLLPLDVVLPK--------PKAPAPKPHADRSGDSNKNMDDESG-VPVEASGGCMNFNRVHVKWMSF----VVLMGGAMI 146
             KVELLQFHTLSSF+SISNFDTLTNPVQTQAGDD KRLQLN+TT GGSHVSM+TG VNAT+TG VYTDNKL IY+VDKVL+PLD+VLP          K  + KP       S K+ DDE+  +P EASG    ++ V   W++     V+L G AM+
Sbjct:  140 HKVELLQFHTLSSFISISNFDTLTNPVQTQAGDDAKRLQLNVTTSGGSHVSMTTGTVNATVTGTVYTDNKLAIYQVDKVLVPLDLVLPAKAPAPAPVSKGDSAKPDDRSKSSSAKDDDDENNDLPAEASGA--GYSNVDGMWLALVFGMVLLAGEAML 295

[Close]

BLAST of PvulFLAVERTChr11.1000482 vs. ExPASy TrEMBL (2024)
Match: tr|I3SRE9|I3SRE9_MEDTR (FAS1 domain-containing protein OS=Medicago truncatula OX=3880 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 3.370e-49
Identity = 95/158 (60.13%), Postives = 112/158 (70.89%), Query Frame = 0

Query:    2 QKVELLQFHTLSSFLSISNFDTLTNPVQTQAGDDPKRLQLNITTYGGSHVSMSTGAVNATITGIVYTDNKLTIYEVDKVLLPLDVVLPKP--------KAPAPKPHADRSGDSNKNMDDESG-VPVEASGGCMNFNRVHVKWMSF----VVLMGGAMI 146
             KVELLQFHTLSSF+SISNFDTLTNPVQTQAGDD KRLQLN+TT GGSHVSM+TG VNAT+TG VYTDNKL IY+VDKVL+PLD+VLP          K  + KP       S K+ DDE+  +P EASG    ++ V   W++     V+L G AM+
Sbjct:  140 HKVELLQFHTLSSFISISNFDTLTNPVQTQAGDDAKRLQLNVTTSGGSHVSMTTGTVNATVTGTVYTDNKLAIYQVDKVLVPLDLVLPAKAPAPAPVFKGDSAKPDDRSKSSSAKDDDDENNDLPAEASGA--GYSNVDGMWLALVFGMVLLAGEAML 295

[Close]

BLAST of PvulFLAVERTChr11.1000482 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8LEJ6|FLA11_ARATH (Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA11 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.624e-21
Identity = 45/99 (45.45%), Postives = 69/99 (69.70%), Query Frame = 0

Query:    2 QKVELLQFHTLSSFLSISNFDTLTNPVQTQAGDDPK-RLQLNITTYGGSHVSMSTGAVNATITGIVYTDNKLTIYEVDKVLLPLDVVLPKPKAPAPKPH 99
            QKV+L+QFH L + +++  F T++NP++TQAGD    +  LNIT+  G+ V+++TG V+AT+   VY+D +L +Y+VD+VLLPL  +     APAP P 
Sbjct:  100 QKVQLVQFHVLPTLITMPQFQTVSNPLRTQAGDGQNGKFPLNITS-SGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPL-AMFGSSVAPAPAPE 196

[Close]

BLAST of PvulFLAVERTChr11.1000482 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8LEE9|FLA12_ARATH (Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA12 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 8.350e-21
Identity = 43/86 (50.00%), Postives = 64/86 (74.42%), Query Frame = 0

Query:    2 QKVELLQFHTLSSFLSISNFDTLTNPVQTQAGDDPK-RLQLNITTYGGSHVSMSTGAVNATITGIVYTDNKLTIYEVDKVLLPLDV 86
            Q+VEL+QFH + S++S SNF T++NP++TQAGD       LN+TT G + V++++G  N T++G VY+D +L +Y+VDKVLLP  V
Sbjct:  102 QQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTTSGNT-VNITSGVTNTTVSGNVYSDGQLAVYQVDKVLLPQQV 186

[Close]

BLAST of PvulFLAVERTChr11.1000482 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SNC3|FLA4_ARATH (Fasciclin-like arabinogalactan protein 4 OS=Arabidopsis thaliana OX=3702 GN=FLA4 PE=1 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 2.761e-9
Identity = 37/101 (36.63%), Postives = 61/101 (60.40%), Query Frame = 0

Query:    2 QKVELLQFHTLSSFLSISNFDTLTNPVQ-TQAGDD--PKRLQLNITTYGGSHVSMSTGAVNATITGIVYTDNKLTIYEVDKVLLPLDVVLPK---PKAPAP 96
            QK  +L+FH L S+ ++ + +++TNPVQ T A ++       LNI+   GS V++++G V A +T   +  N ++++ V KVLLP + + PK   P A AP
Sbjct:  269 QKAFVLKFHVLHSYYTLGSLESITNPVQPTLATEEMGAGSYTLNISRVNGSIVTINSGVVLAVVTQTAFDQNPVSVFGVSKVLLPKE-LFPKSGQPVATAP 368

[Close]

BLAST of PvulFLAVERTChr11.1000482 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SIL7|FLA6_ARATH (Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6 PE=2 SV=2)

HSP 1 Score: 56.225 bits (134), Expect = 4.665e-9
Identity = 48/151 (31.79%), Postives = 70/151 (46.36%), Query Frame = 0

Query:    2 QKVELLQFHTLSSFLSISNFDTLTNPVQTQA-GDDPKRLQLNITTYGGS-HVSMSTGAVNATITGIVYTDNKLTIYEVDKVLLPLDVVLPKPK---APAPKPHADRSGDSNKNMDDESGVPVEASGGCMNFNRVHVKWMSFVVLMGGAMIC 147
            Q+++L+ +H +  + S+S+    +NPV+TQA G D     LN T    S  V++STG V   I   +     L +Y VD VLLP ++   K     APAPK     S   +   DDE       S G        VK  S  +++  A+ C
Sbjct:  101 QQIQLMLYHIIPKYYSLSDLLLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDSVLLPEELFGTKTTPTGAPAPKSSTSSSDADSPAADDE-----HKSAGS------SVKRTSLGIVVSFALFC 240

[Close]

BLAST of PvulFLAVERTChr11.1000482 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FFH6|FLA13_ARATH (Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana OX=3702 GN=FLA13 PE=1 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 3.564e-7
Identity = 44/131 (33.59%), Postives = 70/131 (53.44%), Query Frame = 0

Query:    3 KVELLQFHTLSSFLSISNFDTLTNPVQTQA-GDDPKRLQ-LNITTYGGSHVSMSTGAVNATITGIVYTDNKLTIYEVDKVLLPLDVVLPK---PKAPAPKPHA-DRSGDSNKNMDDESGVPVEASG-GCMN 126
            +V+L+ +H    F ++ +  +++NPV+TQA G D   +  LN T  G + V++STG V   ++  +  +  L +Y VD VLLP ++   +   P AP PK  + D S DS  +    +    E SG G MN
Sbjct:  100 QVKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVGGVYGLNFTGQG-NQVNVSTGVVETRLSTSLRQERPLAVYVVDMVLLPEEMFGERKISPMAPPPKSKSPDVSDDSESSKKAAAPSESEKSGSGEMN 229

[Close]

BLAST of PvulFLAVERTChr11.1000482 vs. Araport11
Match: | (Symbols: FLA11, ATFLA11 | ARABIDOPSIS FASCICLIN-LIKE ARABINOGALACTAN-PROTEIN 11, FASCICLIN-like arabinogalactan-protein 11 | chr5:752898-753638 REVERSE LENGTH=246)

HSP 1 Score: 88.5817 bits (218), Expect = 4.758e-22
Identity = 45/99 (45.45%), Postives = 69/99 (69.70%), Query Frame = 0

Query:    2 QKVELLQFHTLSSFLSISNFDTLTNPVQTQAGDDPK-RLQLNITTYGGSHVSMSTGAVNATITGIVYTDNKLTIYEVDKVLLPLDVVLPKPKAPAPKPH 99
            QKV+L+QFH L + +++  F T++NP++TQAGD    +  LNIT+  G+ V+++TG V+AT+   VY+D +L +Y+VD+VLLPL  +     APAP P 
Sbjct:  100 QKVQLVQFHVLPTLITMPQFQTVSNPLRTQAGDGQNGKFPLNITS-SGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPL-AMFGSSVAPAPAPE 196

[Close]

BLAST of PvulFLAVERTChr11.1000482 vs. Araport11
Match: | (Symbols: AtFLA12, FLA12 | FASCICLIN-like arabinogalactan-protein 12 | chr5:24325916-24326665 REVERSE LENGTH=249)

HSP 1 Score: 88.1965 bits (217), Expect = 8.588e-22
Identity = 43/86 (50.00%), Postives = 64/86 (74.42%), Query Frame = 0

Query:    2 QKVELLQFHTLSSFLSISNFDTLTNPVQTQAGDDPK-RLQLNITTYGGSHVSMSTGAVNATITGIVYTDNKLTIYEVDKVLLPLDV 86
            Q+VEL+QFH + S++S SNF T++NP++TQAGD       LN+TT G + V++++G  N T++G VY+D +L +Y+VDKVLLP  V
Sbjct:  102 QQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTTSGNT-VNITSGVTNTTVSGNVYSDGQLAVYQVDKVLLPQQV 186

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BLAST of PvulFLAVERTChr11.1000482 vs. Araport11
Match: | (Symbols: FLA4, SOS5 | fasciclin-like arabinogalactan-protein 4, salt overly sensitive 5 | chr3:17136612-17137874 REVERSE LENGTH=420)

HSP 1 Score: 57.7658 bits (138), Expect = 2.792e-10
Identity = 37/101 (36.63%), Postives = 61/101 (60.40%), Query Frame = 0

Query:    2 QKVELLQFHTLSSFLSISNFDTLTNPVQ-TQAGDD--PKRLQLNITTYGGSHVSMSTGAVNATITGIVYTDNKLTIYEVDKVLLPLDVVLPK---PKAPAP 96
            QK  +L+FH L S+ ++ + +++TNPVQ T A ++       LNI+   GS V++++G V A +T   +  N ++++ V KVLLP + + PK   P A AP
Sbjct:  269 QKAFVLKFHVLHSYYTLGSLESITNPVQPTLATEEMGAGSYTLNISRVNGSIVTINSGVVLAVVTQTAFDQNPVSVFGVSKVLLPKE-LFPKSGQPVATAP 368

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BLAST of PvulFLAVERTChr11.1000482 vs. Araport11
Match: | (Symbols: FLA6 | FASCICLIN-like arabinogalactan 6 | chr2:8840663-8841406 FORWARD LENGTH=247)

HSP 1 Score: 56.225 bits (134), Expect = 4.749e-10
Identity = 48/151 (31.79%), Postives = 70/151 (46.36%), Query Frame = 0

Query:    2 QKVELLQFHTLSSFLSISNFDTLTNPVQTQA-GDDPKRLQLNITTYGGS-HVSMSTGAVNATITGIVYTDNKLTIYEVDKVLLPLDVVLPKPK---APAPKPHADRSGDSNKNMDDESGVPVEASGGCMNFNRVHVKWMSFVVLMGGAMIC 147
            Q+++L+ +H +  + S+S+    +NPV+TQA G D     LN T    S  V++STG V   I   +     L +Y VD VLLP ++   K     APAPK     S   +   DDE       S G        VK  S  +++  A+ C
Sbjct:  101 QQIQLMLYHIIPKYYSLSDLLLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDSVLLPEELFGTKTTPTGAPAPKSSTSSSDADSPAADDE-----HKSAGS------SVKRTSLGIVVSFALFC 240

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BLAST of PvulFLAVERTChr11.1000482 vs. Araport11
Match: | (Symbols: FLA13 | FASCICLIN-like arabinogalactan protein 13 precursor | chr5:17761128-17761871 FORWARD LENGTH=247)

HSP 1 Score: 51.2174 bits (121), Expect = 3.621e-8
Identity = 44/131 (33.59%), Postives = 70/131 (53.44%), Query Frame = 0

Query:    3 KVELLQFHTLSSFLSISNFDTLTNPVQTQA-GDDPKRLQ-LNITTYGGSHVSMSTGAVNATITGIVYTDNKLTIYEVDKVLLPLDVVLPK---PKAPAPKPHA-DRSGDSNKNMDDESGVPVEASG-GCMN 126
            +V+L+ +H    F ++ +  +++NPV+TQA G D   +  LN T  G + V++STG V   ++  +  +  L +Y VD VLLP ++   +   P AP PK  + D S DS  +    +    E SG G MN
Sbjct:  100 QVKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVGGVYGLNFTGQG-NQVNVSTGVVETRLSTSLRQERPLAVYVVDMVLLPEEMFGERKISPMAPPPKSKSPDVSDDSESSKKAAAPSESEKSGSGEMN 229

[Close]

BLAST of PvulFLAVERTChr11.1000482 vs. Araport11
Match: | (Symbols: FLA9 | FASCICLIN-like arabinoogalactan 9 | chr1:982625-983368 REVERSE LENGTH=247)

HSP 1 Score: 50.0618 bits (118), Expect = 8.519e-8
Identity = 41/123 (33.33%), Postives = 64/123 (52.03%), Query Frame = 0

Query:    3 KVELLQFHTLSSFLSISNFDTLTNPVQTQA-GDDPKRLQLNITTYGGSHVSMSTGAVNATITGIVYTDNKLTIYEVDKVLLPLDVVLP---KPKAPAPKPHA----DRSGDSNKNM--DDESG 115
            +V+L+ +H    + S+ +  +++NPV+TQA G D     LN T    + +++STG V   I+  +     L +Y VD VLLP ++       P APAPK  +    D SG + K     D+SG
Sbjct:  103 QVKLILYHVSPKYYSMDDLLSVSNPVRTQASGRDNGVYGLNFTGQT-NQINVSTGYVETRISNSLRQQRPLAVYVVDMVLLPGEMFGEHKLSPIAPAPKSKSGGVTDDSGSTKKAASPSDKSG 224

The following BLAST results are available for this feature:

BLAST of PvulFLAVERTChr11.1000482 vs. ExPASy TrEMBL (2024)
BLAST of PvulFLAVERTChr11.1000482 vs. ExPASy Swiss-Prot (2024)
BLAST of PvulFLAVERTChr11.1000482 vs. Araport11

BLAST of PvulFLAVERTChr11.1000482 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
tr\|V7AG19\|V7AG19_PHAVU	1.566e-85	95.24	FAS1 domain-containing protein OS=Phaseolus vulgar...	[more]
tr\|A0A445I2B7\|A0A445I2B7_GLYSO	1.431e-69	74.68	Fasciclin-like arabinogalactan protein 11 OS=Glyci...	[more]
tr\|A0AA86W653\|A0AA86W653_9FABA	1.598e-61	67.70	Uncharacterized protein OS=Sphenostylis stenocarpa...	[more]
tr\|A0A445I1S3\|A0A445I1S3_GLYSO	2.446e-60	65.38	Fasciclin-like arabinogalactan protein 11 OS=Glyci...	[more]
tr\|A0A8B8KAV0\|A0A8B8KAV0_ABRPR	4.697e-57	63.06	Fasciclin-like arabinogalactan protein 11 OS=Abrus...	[more]
tr\|A0A834X9J6\|A0A834X9J6_9FABA	1.340e-56	61.82	Fasciclin-like arabinogalactan protein 11 OS=Senna...	[more]
tr\|A0A6A4PIE6\|A0A6A4PIE6_LUPAL	8.305e-54	59.51	Putative FAS1 domain-containing protein OS=Lupinus...	[more]
tr\|A0A1J7H8N4\|A0A1J7H8N4_LUPAN	3.898e-51	62.25	FAS1 domain-containing protein OS=Lupinus angustif...	[more]
tr\|G7ILU0\|G7ILU0_MEDTR	2.332e-49	60.13	Fasciclin domain protein OS=Medicago truncatula OX...	[more]
tr\|I3SRE9\|I3SRE9_MEDTR	3.370e-49	60.13	FAS1 domain-containing protein OS=Medicago truncat...	[more]

BLAST of PvulFLAVERTChr11.1000482 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
sp\|Q8LEJ6\|FLA11_ARATH	4.624e-21	45.45	Fasciclin-like arabinogalactan protein 11 OS=Arabi...	[more]
sp\|Q8LEE9\|FLA12_ARATH	8.350e-21	50.00	Fasciclin-like arabinogalactan protein 12 OS=Arabi...	[more]
sp\|Q9SNC3\|FLA4_ARATH	2.761e-9	36.63	Fasciclin-like arabinogalactan protein 4 OS=Arabid...	[more]
sp\|Q9SIL7\|FLA6_ARATH	4.665e-9	31.79	Fasciclin-like arabinogalactan protein 6 OS=Arabid...	[more]
sp\|Q9FFH6\|FLA13_ARATH	3.564e-7	33.59	Fasciclin-like arabinogalactan protein 13 OS=Arabi...	[more]

BLAST of PvulFLAVERTChr11.1000482 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11)
Total hits: 6

Position :

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Match Name	E-value	Identity	Description
\|	4.758e-22	45.45	Symbols: FLA11, ATFLA11 \| ARABIDOPSIS FASCICLIN-LI...	[more]
\|	8.588e-22	50.00	Symbols: AtFLA12, FLA12 \| FASCICLIN-like arabinoga...	[more]
\|	2.792e-10	36.63	Symbols: FLA4, SOS5 \| fasciclin-like arabinogalact...	[more]
\|	4.749e-10	31.79	Symbols: FLA6 \| FASCICLIN-like arabinogalactan 6 \|...	[more]
\|	3.621e-8	33.59	Symbols: FLA13 \| FASCICLIN-like arabinogalactan pr...	[more]
\|	8.519e-8	33.33	Symbols: FLA9 \| FASCICLIN-like arabinoogalactan 9 ...	[more]

InterPro

Analysis Name: Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL
Date Performed: 2024-08-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000782	FAS1 domain	PFAM	PF02469	Fasciclin	coord: 2..83 e-value: 0.093 score: 24.3
IPR045003	Fasciclin-like arabinogalactan protein, group A	PANTHER	PTHR32077	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN	coord: 2..123
IPR036378	FAS1 domain superfamily	SUPERFAMILY	82153	FAS1 domain	coord: 3..84

Analysis Name: InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0
Date Performed: 2024-08-19

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000782	FAS1 domain	PFAM	PF02469	Fasciclin	coord: 2..83 e-value: 0.093 score: 24.3
IPR045003	Fasciclin-like arabinogalactan protein, group A	PANTHER	PTHR32077	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN	coord: 2..123
IPR036378	FAS1 domain superfamily	SUPERFAMILY	82153	FAS1 domain	coord: 3..84

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr11:7336843..7337289-
coding sequence from alignment at Chr11:7336843..7337289-

mRNA sequence

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000482 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000482; Name=PvulFLAVERTChr11.1000482; organism=Phaseolus vulgaris; type=mRNA; length=447bp
ATGCAAAAGGTGGAACTCCTACAGTTTCACACTCTTTCTTCCTtcctctc
aatctccaacttcGACACTTTAACCAACCCCGTTCAGACCCAAGCCGGTG
ATGACCCCAAAAGGCTGCAACTTAACATCACCACTTACGGTGGCAGCCAC
GTGAGCATGAGCACCGGTGCCGTCAATGCCACCATTACAGGCATCGTGTA
TACAGACAACAAGCTTACTATTTATGAGGTGGACAAGGTGCTTCTTCCAC
TTGACGTGGTGCTCCCTAAGCCTAAGGCTCCGGCACCAAAGCCACATGCA
GACAGAAGTGGTGATAGTAACAAAAATATGGACGATGAAAGTGGTGTTCC
GGTGGAGGCTTCTGGTGGTTGCATGAATTTCAACCGCGTACATGTAAAAT
GGATGTCTTTTGTTGTTCTGATGGGTGGAGCCATGATATGCATGTAG

protein sequence of drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000482

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000482 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000482; Name=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000482; organism=Phaseolus vulgaris; type=polypeptide; length=148bp
MQKVELLQFHTLSSFLSISNFDTLTNPVQTQAGDDPKRLQLNITTYGGSH
VSMSTGAVNATITGIVYTDNKLTIYEVDKVLLPLDVVLPKPKAPAPKPHA
DRSGDSNKNMDDESGVPVEASGGCMNFNRVHVKWMSFVVLMGGAMICM

mRNA from alignment at Chr11:7336843..7337289-

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000482 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000482; Name=PvulFLAVERTChr11.1000482; organism=Phaseolus vulgaris; type=mRNA; length=447bp; location=Sequence derived from: Chr11:7336843..7337289- (Phaseolus vulgaris
ATGCAAAAGGTGGAACTCCTACAGTTTCACACTCTTTCTTCCTTCCTCTC
AATCTCCAACTTCGACACTTTAACCAACCCCGTTCAGACCCAAGCCGGTG
ATGACCCCAAAAGGCTGCAACTTAACATCACCACTTACGGTGGCAGCCAC
GTGAGCATGAGCACCGGTGCCGTCAATGCCACCATTACAGGCATCGTGTA
TACAGACAACAAGCTTACTATTTATGAGGTGGACAAGGTGCTTCTTCCAC
TTGACGTGGTGCTCCCTAAGCCTAAGGCTCCGGCACCAAAGCCACATGCA
GACAGAAGTGGTGATAGTAACAAAAATATGGACGATGAAAGTGGTGTTCC
GGTGGAGGCTTCTGGTGGTTGCATGAATTTCAACCGCGTACATGTAAAAT
GGATGTCTTTTGTTGTTCTGATGGGTGGAGCCATGATATGCATGTAG

Coding sequence (CDS) from alignment at Chr11:7336843..7337289-

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000482 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000482; Name=PvulFLAVERTChr11.1000482; organism=Phaseolus vulgaris; type=CDS; length=447bp; location=Sequence derived from: Chr11:7336843..7337289- (Phaseolus vulgaris
ATGCAAAAGGTGGAACTCCTACAGTTTCACACTCTTTCTTCCTTCCTCTC
AATCTCCAACTTCGACACTTTAACCAACCCCGTTCAGACCCAAGCCGGTG
ATGACCCCAAAAGGCTGCAACTTAACATCACCACTTACGGTGGCAGCCAC
GTGAGCATGAGCACCGGTGCCGTCAATGCCACCATTACAGGCATCGTGTA
TACAGACAACAAGCTTACTATTTATGAGGTGGACAAGGTGCTTCTTCCAC
TTGACGTGGTGCTCCCTAAGCCTAAGGCTCCGGCACCAAAGCCACATGCA
GACAGAAGTGGTGATAGTAACAAAAATATGGACGATGAAAGTGGTGTTCC
GGTGGAGGCTTCTGGTGGTTGCATGAATTTCAACCGCGTACATGTAAAAT
GGATGTCTTTTGTTGTTCTGATGGGTGGAGCCATGATATGCATGTAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000782	FAS1_domain
IPR045003	FLA_A
IPR036378	FAS1_dom_sf

Search form

PvulFLAVERTChr11.1000482