PvulFLAVERTChr11.1000648

Transcript Overview
NamePvulFLAVERTChr11.1000648
Unique NamedrPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000648
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Sequence length1072
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr11chromosomeChr11:11666258..11669076 -Phaseolus vulgaris cv. Flavert genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anpvfL0116Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjpvfL063Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvfL108Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anpvfL0320Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL0884Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjpvfL664Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anpvfL1117Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL1242Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL1313Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carpvfL006Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carpvfL020Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapvfL092Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pspvfL438Pisum sativum Cameor genome v1aPisum sativum
pspvfL439Pisum sativum Cameor genome v1aPisum sativum
ccapvfL453Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carpvfL567Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
pspvfL773Pisum sativum Cameor genome v1aPisum sativum
pspvfL780Pisum sativum Cameor genome v1aPisum sativum
pspvfL784Pisum sativum Cameor genome v1aPisum sativum
ccapvfL760Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvfpvfR125Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfpvfR133Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhR131Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvfhR145Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvrvR124Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvfvrvR133Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvfvfhR188Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvfhR201Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvrvR154Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvfvssR151Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvfvssR154Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvfvssR164Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvfvuR141Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvpvfL121Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvfvuR161Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvfvuR165Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvpvfL444Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvfL485Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
evm.Ca_v2.0_02291Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Psat7g203000.1Pisum sativum Cameor genome v1aPisum sativum
jg39047.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Va05G046180.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Psat5g261720.1Pisum sativum Cameor genome v1aPisum sativum
rna-XM_014644335.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Hedin2.R1.6g014840.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Va08G056590.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Hedin2.R1.1g450360.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Cc_v2.0_09639.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-XM_014661629.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg44055.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_01343Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.Ca_v2.0_00676Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Vigun05g227700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_014664116.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-TanjilR_03112Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg7384.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun11g118500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.Ca_v2.0_18784Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Cc_v2.0_19498.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Va09G055320.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_19699Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_07231Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun06g159900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Phvul.006G148100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Phvul.011G102200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Phvul.005G115800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr06.1001664Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
PvulFLAVERTChr05.774Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PvulFLAVERTChr11.1000648drPhaVulg.Flavert.1.0gene:PvulFLAVERTChr11.1000648Phaseolus vulgarisgene


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr11.1000648.0drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr11.1000648.0Phaseolus vulgaristhree_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000648.2drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000648.2Phaseolus vulgarisexon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000648.1drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000648.1Phaseolus vulgarisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000648.2drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000648.2Phaseolus vulgarisCDS
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000648.1drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000648.1Phaseolus vulgarisCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr11.1000648.4drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr11.1000648.4Phaseolus vulgarisfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000648drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000648Phaseolus vulgarispolypeptide
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000648drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000648-proteinPhaseolus vulgarispolypeptide


Homology
[Close]
BLAST of PvulFLAVERTChr11.1000648 vs. ExPASy TrEMBL (2024)
Match: tr|V7AG36|V7AG36_PHAVU (Endoplasmic reticulum transmembrane protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G102200g PE=3 SV=1)

HSP 1 Score: 413.305 bits (1061), Expect = 1.656e-145
Identity = 208/212 (98.11%), Postives = 209/212 (98.58%), Query Frame = 0 
Query:    1 MLQLLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSMTKIQQRTLEAGILNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELRILRKTNEVIKKQSRSFEDGKNGNTEEQKTLTEIATLKSKIKKLESECETKGNEAKTLETEVETLKKQSEGFLMEYDRLLEDNQSLRSQLQVIEQSSL 212
            MLQLLYTAIFSEMLLILTLVFKT LRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSMTKIQQRTLEAGILNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELR+LRKTNEVIKKQSRSFEDGKNGN EEQKTLTEIATLKSKIKKLESECETKGNEAKTLETEVE LKKQSEGFLMEYDRLLEDNQSLRSQLQVIEQSSL
Sbjct:    1 MLQLLYTAIFSEMLLILTLVFKTSLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSMTKIQQRTLEAGILNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELRLLRKTNEVIKKQSRSFEDGKNGNAEEQKTLTEIATLKSKIKKLESECETKGNEAKTLETEVEVLKKQSEGFLMEYDRLLEDNQSLRSQLQVIEQSSL 212
[Close]
BLAST of PvulFLAVERTChr11.1000648 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86W6K1|A0AA86W6K1_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS31275 PE=4 SV=1)

HSP 1 Score: 385.571 bits (989), Expect = 1.672e-134
Identity = 194/212 (91.51%), Postives = 201/212 (94.81%), Query Frame = 0 
Query:    1 MLQLLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSMTKIQQRTLEAGILNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELRILRKTNEVIKKQSRSFEDGKNGNTEEQKTLT-EIATLKSKIKKLESECETKGNEAKTLETEVETLKKQSEGFLMEYDRLLEDNQSLRSQLQVIEQSS 211
            MLQLLYTAIFSEMLLILTLVFKTPLRKLVI+SLDRVKRGRGP+VVSTVGATLVVVLSSSLYSM KIQQRTLEAG+LNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELR+LRKT E IKKQSRSFE+ KNGNT EQK LT EIATLKSKIKKLESECE KGN AKTLETEVE LKKQS+GFLMEYDRLLEDNQSLRSQLQ I+QSS
Sbjct:    1 MLQLLYTAIFSEMLLILTLVFKTPLRKLVIVSLDRVKRGRGPVVVSTVGATLVVVLSSSLYSMAKIQQRTLEAGMLNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELRLLRKTMEAIKKQSRSFEESKNGNTVEQKALTVEIATLKSKIKKLESECEEKGNVAKTLETEVEALKKQSDGFLMEYDRLLEDNQSLRSQLQAIDQSS 212
[Close]
BLAST of PvulFLAVERTChr11.1000648 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6LHD5|A0A4D6LHD5_VIGUN (Endoplasmic reticulum transmembrane protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG3g2493 PE=3 SV=1)

HSP 1 Score: 385.571 bits (989), Expect = 1.825e-134
Identity = 196/213 (92.02%), Postives = 201/213 (94.37%), Query Frame = 0 
Query:    1 MLQLLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSMTKIQQRTLEAGILNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELRILRKTNEVIKKQSRSFEDGKNGNTEEQKTLT-EIATLKSKIKKLESECETKGNEAKTLETEVETLKKQSEGFLMEYDRLLEDNQSLRSQLQVIEQSSL 212
            ML LLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSM KIQ RTLEAGILNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELR+LRKT E IKKQSRSFEDGKNG+TEE KTLT EIATLKSKIKKLESECE KG+ AK+LETEVE  KKQSEGFLMEYDRLLEDNQSLRSQLQ +EQSSL
Sbjct:    1 MLHLLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSMAKIQHRTLEAGILNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELRLLRKTMEAIKKQSRSFEDGKNGHTEELKTLTEEIATLKSKIKKLESECEAKGHAAKSLETEVEAHKKQSEGFLMEYDRLLEDNQSLRSQLQSLEQSSL 213
[Close]
BLAST of PvulFLAVERTChr11.1000648 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3VN22|A0A1S3VN22_VIGRR (Endoplasmic reticulum transmembrane protein OS=Vigna radiata var. radiata OX=3916 GN=LOC106776631 PE=3 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 1.930e-132
Identity = 192/211 (91.00%), Postives = 197/211 (93.36%), Query Frame = 0 
Query:    1 MLQLLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSMTKIQQRTLEAGILNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELRILRKTNEVIKKQSRSFEDGKNGNTEEQKTLT-EIATLKSKIKKLESECETKGNEAKTLETEVETLKKQSEGFLMEYDRLLEDNQSLRSQLQVIEQS 210
            MLQLLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSM KIQQR LEAGILNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELR+LRK  E IKKQSRSFEDGKNGNTEE K LT EIATLKSKIK LESECE KG+EAK+LETEVE  KKQSEGFLMEYDRLLEDNQSLRSQLQ ++ S
Sbjct:    1 MLQLLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSMAKIQQRILEAGILNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELRLLRKAMEAIKKQSRSFEDGKNGNTEELKALTEEIATLKSKIKTLESECEAKGHEAKSLETEVEAHKKQSEGFLMEYDRLLEDNQSLRSQLQALDSS 211
[Close]
BLAST of PvulFLAVERTChr11.1000648 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8KVY1|A0A8B8KVY1_ABRPR (Endoplasmic reticulum transmembrane protein OS=Abrus precatorius OX=3816 GN=LOC113858903 PE=3 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 1.940e-132
Identity = 185/213 (86.85%), Postives = 203/213 (95.31%), Query Frame = 0 
Query:    1 MLQLLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSMTKIQQRTLEAGILNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELRILRKTNEVIKKQSRSFEDGKNGNTEEQKTLT-EIATLKSKIKKLESECETKGNEAKTLETEVETLKKQSEGFLMEYDRLLEDNQSLRSQLQVIEQSSL 212
            MLQLLYTAIFSEM+LILTLVFKTPLRKLVII+LDRVKRGRGP+VVSTVGATLVVVL+SSLYSM KIQQRT+EAG++NPTDQVLMSKHMLEASLMGF+LFLSLMIDRLHHYIRELR+LRKT E +KKQSRSFE+GKNGNTEE K LT EIA LKS++KKLESECE KGN+AKTLETEVE LKKQSEGFLMEYDRLLEDNQ+LRSQLQ ++Q+SL
Sbjct:    1 MLQLLYTAIFSEMILILTLVFKTPLRKLVIITLDRVKRGRGPVVVSTVGATLVVVLASSLYSMAKIQQRTIEAGVVNPTDQVLMSKHMLEASLMGFVLFLSLMIDRLHHYIRELRLLRKTMEAVKKQSRSFEEGKNGNTEEHKALTEEIAALKSEVKKLESECEAKGNKAKTLETEVEALKKQSEGFLMEYDRLLEDNQNLRSQLQAVDQNSL 213
[Close]
BLAST of PvulFLAVERTChr11.1000648 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SBX9|A0A0S3SBX9_PHAAN (Endoplasmic reticulum transmembrane protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G153100 PE=3 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 1.994e-132
Identity = 193/211 (91.47%), Postives = 197/211 (93.36%), Query Frame = 0 
Query:    1 MLQLLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSMTKIQQRTLEAGILNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELRILRKTNEVIKKQSRSFEDGKNGNTEEQKTLT-EIATLKSKIKKLESECETKGNEAKTLETEVETLKKQSEGFLMEYDRLLEDNQSLRSQLQVIEQS 210
            MLQLLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSM KIQQR LEAGILNPTDQVLMS HMLEASLMGFLLFLSLMIDRLHHYIRELR+LRK  E IKKQSRSFED KNGNTEE K LT EIATLKSKIKKLESECETKG+EAK+LETEVE  KKQSEGFLMEYDRLLEDNQSLRSQLQ +E S
Sbjct:    1 MLQLLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSMAKIQQRILEAGILNPTDQVLMSNHMLEASLMGFLLFLSLMIDRLHHYIRELRLLRKAMEAIKKQSRSFEDDKNGNTEELKALTEEIATLKSKIKKLESECETKGHEAKSLETEVEAHKKQSEGFLMEYDRLLEDNQSLRSQLQALESS 211
[Close]
BLAST of PvulFLAVERTChr11.1000648 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0KBY0|A0A8T0KBY0_PHAAN (Endoplasmic reticulum transmembrane protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0144170 PE=3 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 1.994e-132
Identity = 193/211 (91.47%), Postives = 197/211 (93.36%), Query Frame = 0 
Query:    1 MLQLLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSMTKIQQRTLEAGILNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELRILRKTNEVIKKQSRSFEDGKNGNTEEQKTLT-EIATLKSKIKKLESECETKGNEAKTLETEVETLKKQSEGFLMEYDRLLEDNQSLRSQLQVIEQS 210
            MLQLLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSM KIQQR LEAGILNPTDQVLMS HMLEASLMGFLLFLSLMIDRLHHYIRELR+LRK  E IKKQSRSFED KNGNTEE K LT EIATLKSKIKKLESECETKG+EAK+LETEVE  KKQSEGFLMEYDRLLEDNQSLRSQLQ +E S
Sbjct:    1 MLQLLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSMAKIQQRILEAGILNPTDQVLMSNHMLEASLMGFLLFLSLMIDRLHHYIRELRLLRKAMEAIKKQSRSFEDDKNGNTEELKALTEEIATLKSKIKKLESECETKGHEAKSLETEVEAHKKQSEGFLMEYDRLLEDNQSLRSQLQALESS 211
[Close]
BLAST of PvulFLAVERTChr11.1000648 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445KG61|A0A445KG61_GLYSO (Endoplasmic reticulum transmembrane protein OS=Glycine soja OX=3848 GN=D0Y65_016274 PE=3 SV=1)

HSP 1 Score: 380.178 bits (975), Expect = 2.142e-132
Identity = 190/213 (89.20%), Postives = 198/213 (92.96%), Query Frame = 0 
Query:    1 MLQLLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSMTKIQQRTLEAGILNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELRILRKTNEVIKKQSRSFEDGKNGNTEEQKTLT-EIATLKSKIKKLESECETKGNEAKTLETEVETLKKQSEGFLMEYDRLLEDNQSLRSQLQVIEQSSL 212
            MLQLLYTAIF EM+LILTLVFKTPLRKLVI+SLDRVKRGRGP+VVSTVGATLVVVL+SSLYSM KIQQRTLEAGI+NPTDQVLMSKHMLEASLMGF+LFLSLMIDRLHHYIRELR LRKT E IKKQSRSFEDGKNGN EE K L  EI TLKSKIKKLESECE KGN+AKTLETEVE LKKQSEGFLMEYDRLLEDNQSLRSQLQ IEQ+ L
Sbjct:    1 MLQLLYTAIFFEMILILTLVFKTPLRKLVIVSLDRVKRGRGPVVVSTVGATLVVVLASSLYSMAKIQQRTLEAGIVNPTDQVLMSKHMLEASLMGFVLFLSLMIDRLHHYIRELRSLRKTMEAIKKQSRSFEDGKNGNLEEHKALNEEITTLKSKIKKLESECEAKGNQAKTLETEVEALKKQSEGFLMEYDRLLEDNQSLRSQLQAIEQNPL 213
[Close]
BLAST of PvulFLAVERTChr11.1000648 vs. ExPASy TrEMBL (2024)
Match: tr|C6THE6|C6THE6_SOYBN (Endoplasmic reticulum transmembrane protein OS=Glycine max OX=3847 GN=100798727 PE=2 SV=1)

HSP 1 Score: 380.178 bits (975), Expect = 2.142e-132
Identity = 190/213 (89.20%), Postives = 198/213 (92.96%), Query Frame = 0 
Query:    1 MLQLLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSMTKIQQRTLEAGILNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELRILRKTNEVIKKQSRSFEDGKNGNTEEQKTLT-EIATLKSKIKKLESECETKGNEAKTLETEVETLKKQSEGFLMEYDRLLEDNQSLRSQLQVIEQSSL 212
            MLQLLYTAIF EM+LILTLVFKTPLRKLVI+SLDRVKRGRGP+VVSTVGATLVVVL+SSLYSM KIQQRTLEAGI+NPTDQVLMSKHMLEASLMGF+LFLSLMIDRLHHYIRELR LRKT E IKKQSRSFEDGKNGN EE K L  EI TLKSKIKKLESECE KGN+AKTLETEVE LKKQSEGFLMEYDRLLEDNQSLRSQLQ IEQ+ L
Sbjct:    1 MLQLLYTAIFFEMILILTLVFKTPLRKLVIVSLDRVKRGRGPVVVSTVGATLVVVLASSLYSMAKIQQRTLEAGIVNPTDQVLMSKHMLEASLMGFVLFLSLMIDRLHHYIRELRSLRKTMEAIKKQSRSFEDGKNGNLEEHKALNEEITTLKSKIKKLESECEAKGNQAKTLETEVEALKKQSEGFLMEYDRLLEDNQSLRSQLQAIEQNPL 213
[Close]
BLAST of PvulFLAVERTChr11.1000648 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445HMZ5|A0A445HMZ5_GLYSO (Endoplasmic reticulum transmembrane protein OS=Glycine soja OX=3848 GN=D0Y65_033857 PE=3 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 2.287e-132
Identity = 190/213 (89.20%), Postives = 199/213 (93.43%), Query Frame = 0 
Query:    1 MLQLLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSMTKIQQRTLEAGILNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELRILRKTNEVIKKQSRSFEDGKNGNTEEQKTLT-EIATLKSKIKKLESECETKGNEAKTLETEVETLKKQSEGFLMEYDRLLEDNQSLRSQLQVIEQSSL 212
            MLQLLYTAIFSEMLLILTLVFKTPLRKLVI+SLD VKRGRGP+VVSTVGATL+VVL+SSLYSM KIQQRTLEAGI+NPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELR LRKT E IKKQSRSFEDGKNGN+EE K L  EI TLKSKIKKLESECE KG++AKTLETEVE LKKQSEGFLMEYDRLLEDNQSLRSQLQ I+QS L
Sbjct:    1 MLQLLYTAIFSEMLLILTLVFKTPLRKLVIVSLDSVKRGRGPVVVSTVGATLMVVLASSLYSMAKIQQRTLEAGIVNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELRSLRKTMEAIKKQSRSFEDGKNGNSEEHKALNEEITTLKSKIKKLESECEAKGSQAKTLETEVEALKKQSEGFLMEYDRLLEDNQSLRSQLQAIDQSPL 213
[Close]
BLAST of PvulFLAVERTChr11.1000648 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:17021459-17022497 REVERSE LENGTH=218)

HSP 1 Score: 290.812 bits (743), Expect = 1.624e-100
Identity = 142/211 (67.30%), Postives = 172/211 (81.52%), Query Frame = 0 
Query:    1 MLQLLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSMTKIQQRTLEAGILNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELRILRKTNEVIKKQSRSFEDGKNGNTEEQKTLT-EIATLKSKIKKLESECETKGNEAKTLETEVETLKKQSEGFLMEYDRLLEDNQSLRSQLQVIEQS 210
            M+ LLYT IF+EM LIL L+FKTPLRKL+I++ DR+KRGRGP+VV T+G T+ VVL SS+YS+  IQ+R+ +  +LNPTDQVL SKH+LEASLMGF+LFLSLMIDRLHHYIRELR+LRKT E  KKQ+R FEDGK  + EE K L  EIA LK+KIK LESE E+KG E K  + E E L+KQ++GFLMEYDRLLEDNQ+LR+QL+ I  S
Sbjct:    1 MIHLLYTVIFAEMALILLLLFKTPLRKLIILTFDRIKRGRGPVVVKTIGTTVFVVLLSSIYSLVNIQRRSEDGAVLNPTDQVLASKHLLEASLMGFVLFLSLMIDRLHHYIRELRLLRKTMETAKKQNRGFEDGKTTSGEEVKALGEEIAALKAKIKTLESESESKGKELKGAQGETEALRKQADGFLMEYDRLLEDNQNLRNQLESIGHS 211
[Close]
BLAST of PvulFLAVERTChr11.1000648 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:4014958-4016222 FORWARD LENGTH=221)

HSP 1 Score: 226.868 bits (577), Expect = 2.456e-75
Identity = 111/209 (53.11%), Postives = 157/209 (75.12%), Query Frame = 0 
Query:    1 MLQLLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSMTKIQQRTLEAGILNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELRILRKTNEVIKKQSRSFEDGKNGNTEEQKTLT-EIATLKSKIKKLESECETKGNEAKTLETEVETLKKQSEGFLMEYDRLLEDNQSLRSQLQVIE 208
            M QLL+  +  E+++I+ L FKTP+RKL+I+SLDR KRGRGP+V+ TV AT++V+L +S+Y+M  IQ+R +E G++NPTD+V+M+KH+LE++LMG  LFL LMIDRLHHY+RELRI RK  EVIKK+    E  K    +E K L  EI +L+ + ++L+SE E +  E +T +T    L+KQSEGFL+E++RLLE+NQ LR QL  ++
Sbjct:    1 MQQLLFAVVLFEVVVIMALSFKTPIRKLLIMSLDRSKRGRGPVVIQTVSATVIVLLVTSVYNMMGIQKRWIEDGVVNPTDEVIMAKHLLESTLMGGFLFLGLMIDRLHHYMRELRIRRKNMEVIKKEGALLEGVKARGLDEVKNLMEEITSLRKRQEQLDSELEARSKEIRTEKTSAVALQKQSEGFLIEFNRLLEENQVLRDQLHTVD 209
[Close]
BLAST of PvulFLAVERTChr11.1000648 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:4014958-4016222 FORWARD LENGTH=220)

HSP 1 Score: 197.978 bits (502), Expect = 6.128e-64
Identity = 102/209 (48.80%), Postives = 151/209 (72.25%), Query Frame = 0 
Query:    1 MLQLLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSMTKIQQRTLEAGILNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELRILRKTNEVIKKQSRSFEDGKNGNTEEQKTLT-EIATLKSKIKKLESECETKGNEAKTLETEVETLKKQSEGFLMEYDRLLEDNQSLRSQLQVIE 208
            M QLL+  +  E+++I+ L FKTP+RKL+I+SLDR KRGRGP+V+ TV AT++V+L +S+Y+M  IQ+R +E G++NPTD+V+M+KH+LE++LM   +    ++  LHHY+RELRI RK  EVIKK+    E  K    +E K L  EI +L+ + ++L+SE E +  E +T +T    L+KQSEGFL+E++RLLE+NQ LR QL  ++
Sbjct:    1 MQQLLFAVVLFEVVVIMALSFKTPIRKLLIMSLDRSKRGRGPVVIQTVSATVIVLLVTSVYNMMGIQKRWIEDGVVNPTDEVIMAKHLLESTLM-VRVLELCLLLWLHHYMRELRIRRKNMEVIKKEGALLEGVKARGLDEVKNLMEEITSLRKRQEQLDSELEARSKEIRTEKTSAVALQKQSEGFLIEFNRLLEENQVLRDQLHTVD 208
[Close]
BLAST of PvulFLAVERTChr11.1000648 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:19736986-19738327 FORWARD LENGTH=219)

HSP 1 Score: 134.035 bits (336), Expect = 5.618e-39
Identity = 87/213 (40.85%), Postives = 134/213 (62.91%), Query Frame = 0 
Query:    1 MLQLLYTAIFSEMLLILTLVFKT-PLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSMTKIQQRTLEAGILNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELRILRKTNEVIKKQSRSFEDGKNGNTEEQKTL--------TEIATLKSKIKKLESECETKGNEAKTLETEVETLKKQSEGFLMEYDRLLEDNQSLRSQL 204
            M+QLL+  +F E  +   L+ K  PLR+LVI SLD++K G+GP  V T+  T+ V+L S+L S+ KIQ +  + G ++P DQVL   H+LEASL+G +LFL  +IDR+HHY+R+L  LR      K++    +  +    E+++           +++++  ++KK E+E + K  + +T ET V  L+KQS   L+EYDRLLEDNQ L+SQ+
Sbjct:    1 MIQLLFLVLFVEGAIAFLLLIKIGPLRELVIKSLDQMKMGKGPATVKTIAGTMSVILFSNLMSIVKIQNKGAKLGTMSPMDQVLWRTHLLEASLLGVVLFLGFIIDRMHHYLRKLINLRSNVGSSKEELEQLQKERTELKEKEEKASKEIKQLQVKLSSITERLKKAETESKEKEKKLETAETHVTALQKQSAELLLEYDRLLEDNQHLQSQI 213
[Close]
BLAST of PvulFLAVERTChr11.1000648 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:2285979-2287155 REVERSE LENGTH=220)

HSP 1 Score: 124.405 bits (311), Expect = 4.034e-35
Identity = 82/218 (37.61%), Postives = 124/218 (56.88%), Query Frame = 0 
Query:    1 MLQLLYTAIFSEMLLILTLVFKT-PLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSMTKIQQRTLEAGILNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELRILRKTNEVIKKQSRSFEDGKNGNTEEQKTLTEIATLKSKIK-KLESECET----------KGNEAKTLETEVETLKKQSEGFLMEYDRLLEDNQSLRSQLQV 206
            M+QLL+  +F E  +   L+ K  PLR+LV+ SLD++K G+ P  + T+  T+ V+L S+L ++ KIQ +  + G ++P DQVL   H+LEASLMG +LF   +IDR HHY+ +L  LR     +       E+ +    E ++   + +    ++K KL    E           K  + +T E  V  L+KQS   L+EYDRLLEDNQ+L+SQ+ V
Sbjct:    1 MIQLLFLVLFVEGAIAFLLLVKIGPLRELVMKSLDQLKLGKRPATLKTIAGTMSVILLSNLMNIIKIQNKGAKLGTMSPMDQVLWRTHLLEASLMGVVLFFGFIIDRTHHYLEKLITLRSN---VGSSKGELEELRKERIELKEKEEKTSKEIKQLKEKLSCVSENLKKLEKESKEKETKLETAEAHVTALQKQSSELLLEYDRLLEDNQNLQSQILV 215
[Close]
BLAST of PvulFLAVERTChr11.1000648 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:7130723-7131239 REVERSE LENGTH=137)

HSP 1 Score: 119.398 bits (298), Expect = 3.402e-34
Identity = 60/131 (45.80%), Postives = 91/131 (69.47%), Query Frame = 0 
Query:    1 MLQLLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGATLVVVLSSSLYSMTKIQQRTLEA-GILNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELRILRKTNEVIKKQSRS 130
            M QLL+T +  E +LILTL F TP R++V+  LD  K+GR P+V  TV AT++V+  S ++S  +I  R  E+ G+ N TDQV+ +  +LEA LMG +LFL+++IDR+H+Y REL+I R+  E+  K+ ++
Sbjct:    5 MFQLLFTIVTIEAVLILTLGFGTPARRVVVKLLDLSKQGRAPLVAKTVAATMLVLFGSVMFSTIQIHTRVSESGGVANSTDQVMFANRLLEAFLMGTVLFLAMVIDRMHYYTRELQITRRNLEIAVKKGKT 135
[Close]
BLAST of PvulFLAVERTChr11.1000648 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:19737214-19738327 FORWARD LENGTH=143)

HSP 1 Score: 76.2554 bits (186), Expect = 1.596e-17
Identity = 54/137 (39.42%), Postives = 85/137 (62.04%), Query Frame = 0 
Query:   76 LNPTDQVLMSKHMLEASLMGFLLFLSLMIDRLHHYIRELRILRKTNEVIKKQSRSFEDGKNGNTEEQKTL--------TEIATLKSKIKKLESECETKGNEAKTLETEVETLKKQSEGFLMEYDRLLEDNQSLRSQL 204
            ++P DQVL   H+LEASL+G +LFL  +IDR+HHY+R+L  LR      K++    +  +    E+++           +++++  ++KK E+E + K  + +T ET V  L+KQS   L+EYDRLLEDNQ L+SQ+
Sbjct:    1 MSPMDQVLWRTHLLEASLLGVVLFLGFIIDRMHHYLRKLINLRSNVGSSKEELEQLQKERTELKEKEEKASKEIKQLQVKLSSITERLKKAETESKEKEKKLETAETHVTALQKQSAELLLEYDRLLEDNQHLQSQI 137
The following BLAST results are available for this feature:
BLAST of PvulFLAVERTChr11.1000648 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|V7AG36|V7AG36_PHAVU1.656e-14598.11Endoplasmic reticulum transmembrane protein OS=Pha... [more]
tr|A0AA86W6K1|A0AA86W6K1_9FABA1.672e-13491.51Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A4D6LHD5|A0A4D6LHD5_VIGUN1.825e-13492.02Endoplasmic reticulum transmembrane protein OS=Vig... [more]
tr|A0A1S3VN22|A0A1S3VN22_VIGRR1.930e-13291.00Endoplasmic reticulum transmembrane protein OS=Vig... [more]
tr|A0A8B8KVY1|A0A8B8KVY1_ABRPR1.940e-13286.85Endoplasmic reticulum transmembrane protein OS=Abr... [more]
tr|A0A0S3SBX9|A0A0S3SBX9_PHAAN1.994e-13291.47Endoplasmic reticulum transmembrane protein OS=Vig... [more]
tr|A0A8T0KBY0|A0A8T0KBY0_PHAAN1.994e-13291.47Endoplasmic reticulum transmembrane protein OS=Pha... [more]
tr|A0A445KG61|A0A445KG61_GLYSO2.142e-13289.20Endoplasmic reticulum transmembrane protein OS=Gly... [more]
tr|C6THE6|C6THE6_SOYBN2.142e-13289.20Endoplasmic reticulum transmembrane protein OS=Gly... [more]
tr|A0A445HMZ5|A0A445HMZ5_GLYSO2.287e-13289.20Endoplasmic reticulum transmembrane protein OS=Gly... [more]
back to top
BLAST of PvulFLAVERTChr11.1000648 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of PvulFLAVERTChr11.1000648 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11)
Total hits: 7
Match NameE-valueIdentityDescription
|1.624e-10067.30Symbols: no symbol available | no full name availa... [more]
|2.456e-7553.11Symbols: no symbol available | no full name availa... [more]
|6.128e-6448.80Symbols: no symbol available | no full name availa... [more]
|5.618e-3940.85Symbols: no symbol available | no full name availa... [more]
|4.034e-3537.61Symbols: no symbol available | no full name availa... [more]
|3.402e-3445.80Symbols: no symbol available | no full name availa... [more]
|1.596e-1739.42Symbols: no symbol available | no full name availa... [more]
back to top
InterPro
Analysis Name: Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:1.20.5.110:FF:000011coord: 137..200
e-value: 2.6E-21
score: 77.2
NoneNo IPR availableGENE3D1.20.5.110coord: 138..200
e-value: 1.9E-14
score: 55.3
IPR041672Bap31/Bap29 cytoplasmic coiled-coil domainPFAMPF18035Bap31_Bap29_Ccoord: 147..200
e-value: 8.4E-4
score: 30.6
IPR008417B-cell receptor-associated protein 29/31PANTHERPTHR12701BCR-ASSOCIATED PROTEIN, BAPcoord: 1..201

Analysis Name: InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:1.20.5.110:FF:000011coord: 137..200
e-value: 2.6E-21
score: 77.2
NoneNo IPR availableGENE3D1.20.5.110coord: 138..200
e-value: 1.9E-14
score: 55.3
IPR041672Bap31/Bap29 cytoplasmic coiled-coil domainPFAMPF18035Bap31_Bap29_Ccoord: 147..200
e-value: 8.4E-4
score: 30.6
IPR008417B-cell receptor-associated protein 29/31PANTHERPTHR12701BCR-ASSOCIATED PROTEIN, BAPcoord: 1..201

Sequences
The following sequences are available for this feature:

mRNA sequence

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000648 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000648; Name=PvulFLAVERTChr11.1000648; organism=Phaseolus vulgaris; type=mRNA; length=1072bp
GACCTTGACTTGTTTTGGAgtttgaaatgaaaaataaagttttgaatACA
GAAAATTCCAAGCACATGCCGCATTGGATCAGCGCATACCTTAGTGAACC
CACAcgcttcttttcttcttcctctattctttttctcttcctctATTCAG
ACCTTTTCTTCTATTCTATTCTCTTCTCTAGAATTTTCTGCTGCCAGTGA
TACAAGATGTTGCAGCTACTCTATACTGCAATTTTCAGCGAAATGCTTCT
GATTCTCACCCTCGTTTTCAAAACTCCTCTCAGAAAACTCGTCATCATCT
CCCTCGATCGGGTTAAACGTGGCCGTGGCCCCATCGTGGTGTCCACGGTG
GGCGCCACATTGGTGGTGGTTCTCTCTTCCAGCCTCTACAGCATGACCAA
GATCCAGCAACGCACCCTTGAGGCCGGTATACTCAACCCCACCGACCAAG
TTCTCATGTCCAAACACATGTTGGAAGCTTCTCTCATGGGATTTTTGCTA
TTTCTCTCTCTTATGATTGATAGATTGCATCATTACATAAGAGAACTCCG
TATACTAAGAAAGACCAATGAGGTTATTAAGAAACAAAGTCGAAGTTTTG
AAGATGGCAAAAATGGCAATACAGAGGAACAGAAAACATTGACAGAAATT
GCCACATTGAAATCCAAAATTAAGAAACTGGAATCTGAATGTGAGACAAA
AGGAAATGAGGCTAAGACTTTAGAAACTGAAGTAGAGACTCTTAAAAAGC
AGTCGGAAGGTTTCCTTATGGAATATGATCGCCTCTTGGAAGACAATCAG
AGTCTTCGGAGTCAGTTGCAGGTCATTGAACAAAGCTCTTTGTAATcctg
ataataaaataatacattgttgaaatatctaaaaatcaactctaTCCTTA
TGTTTAAATAACTCCTGTTTGAATGTCTCGTACTTTCTTAATGAGATCAC
ATTTGTATATACTAAGTGTTTGAAACAAATTACCTCTGTTTTAAGCAGCT
CACATCTATTATTATGTATGTGAGCCTGTAGCCATATTCTTCAAAATGGT
AAGATGATCATAGATATTTATT
back to top

protein sequence of drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000648

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000648 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000648; Name=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000648; organism=Phaseolus vulgaris; type=polypeptide; length=212bp
MLQLLYTAIFSEMLLILTLVFKTPLRKLVIISLDRVKRGRGPIVVSTVGA
TLVVVLSSSLYSMTKIQQRTLEAGILNPTDQVLMSKHMLEASLMGFLLFL
SLMIDRLHHYIRELRILRKTNEVIKKQSRSFEDGKNGNTEEQKTLTEIAT
LKSKIKKLESECETKGNEAKTLETEVETLKKQSEGFLMEYDRLLEDNQSL
RSQLQVIEQSSL
back to top

mRNA from alignment at Chr11:11666258..11669076-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000648 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000648; Name=PvulFLAVERTChr11.1000648; organism=Phaseolus vulgaris; type=mRNA; length=2819bp; location=Sequence derived from: Chr11:11666258..11669076- (Phaseolus vulgaris
GACCTTGACTTGTTTTGGAGTTTGAAATGAAAAATAAAGTTTTGAATACA
GAAAATTCCAAGCACATGCCGCATTGGATCAGCGCATACCTTAGTGAACC
CACACGCTTCTTTTCTTCTTCCTCTATTCTTTTTCTCTTCCTCTATTCAG
ACCTTTTCTTCTATTCTATTCTCTTCTCTAGAATTTTCTGCTGCCAGTGA
TACAAGATGTTGCAGCTACTCTATACTGCAATTTTCAGCGAAATGCTTCT
GATTCTCACCCTCGTTTTCAAAACTCCTCTCAGAAAACTCGTCATCATCT
CCCTCGATCGGGTTAAACGTGGCCGTGGCCCCATCGTGGTGTCCACGGTG
GGCGCCACATTGGTGGTGGTTCTCTCTTCCAGCCTCTACAGCATGACCAA
GATCCAGCAACGCACCCTTGAGGCCGGTATACTCAACCCCACCGACCAAG
TTCTCATGTCCAAACACATGTTGGAAGCTTCTCTCATGGGTATCTCTCAA
AAACCTTTCTTTTGTTTCTAAACTCAAACCCCTGTTTTTTGGGTTTGGGA
ATTAGGTTAAGTTGTTTGAGTTATTTATTTATTTTTGTTGATTCTGGGAG
AAAGGAGTACTATGGAGAATTAATTACTTATTGATATATGGAAGTGATTG
TGGATTTTTGTGCTATTATACATATATGCTGATTTATGGATCAAGTGATT
GTGGATTTTTGTGCTATTTTACATATATGTGATTACAGTGATAGATGATA
TTTTTAGGAAATTCCATTGTGTTGTTTTTTATTGTTTAATTACTTACTGA
TTTGGCCTCTATATCTTTATATCTGAACAATCTTTACGTTTTAGTTCTTA
TATTTAAAAAGTACCCGACTTTGTGCTTCCGTATAATATGGATTTCCGTT
TATATATTGGTTCTTCAGTGCTATTTGATGAATTAGAAATGGTGCTAGTG
GTTTCACATGCTTCGTATCTTTTGTAGTAATTGGTGTAGAATGATTCAGT
ATTAGGCAGGTCGTTTCAAACTTTCGTGTGAATGGGTTTTTATTTTGGGT
AGAGGTGATTAAGGTGTTCTAGGAAATGGATGTGAATCGTCATCAGCTTA
CTATATAATTGATTGCTTGAAATTTTAGGAGTTTGACACTTATAATACTT
TCAATTGTCTATTTGAATTTGAATTGTGAGGTCTTAAGTAAAAGTTTGGC
ATGGATAATCATAAGAAAAAAAATGGAAAATTACTCTTATAAGGAAATTA
GAACGGAAAGAGAGGGAAGTAGAAACATGCAAGTGATGTGGTAATCTGAA
GAATGAAGTGATGGCATGGTGACCATGGTAATCTGTAGCTTTGTGATATA
AATCATATCAGCACATTTGTTTACTATATAACTCTGTAATAAGATTATAA
GAGTGAGTGCCCTTCTCTTCTTTGTGGAAGACGTAATATAATATTATTTG
ATTATGTCAATGACTAGCTTGATTGACATTGTTTTGTTTCCTTTTCTGAA
GTGTGTCAAACATCAACAAGAGGCTCTTCCCACCTAGTAAGACAGCTAAA
GTATTCATTGTGTTTTGTCAAAATCTAACTTTAGCTTTAAGATCTAGCTT
TTTTGGTTGTATCTTTATTTATTGTGTATTCTTCCATATGACCAACTATT
ATCGGGATGTCTGATGGTCTTCTCATGACATGGCCAAACAATCTTATTTA
AGACTCTACCATACCATCTCTTCCTCAATAGGTTTTGCTTCTACATTCTT
TCCATTACATCCAGTCCTAATTTCTTATTTTCTTGTATGTCCTATGTACC
ACGGCATTTTCATCTCTGCTACATTTTGGATATGCTCTTGTTGGTACTAT
ATCGCCCAACCAAACATTCCGTACCACAAAAGCATATCTGGTCTTATTGC
AGTTTCTTTAAATTTCCCTTTTTGAGTTCAAGAGCACCTGCCACCTGTCA
ATCACAATAATACTTAGAAACATTTTCTCCAAAGAAACCAACAGGCATGA
ATTCTATGATCTACTTCTATGTTTATCTCATGTGTATGATAATAAGTACT
TGAAAATTCTTTTGAACAGTAAGAAGCGATTATATTATATAATTTAACTC
AGTGGGGATAAATTAACGACTTTGATACTAGAGTTGAAATAGATTTTTTC
TGTTATGTTTTAAGTGTTTTTGTGTTTCATGAATGTTGTTGTAGTCTTTT
TTTTTTAATTTATAATTTTGCATATAATTTATGCAGGATTTTTGCTATTT
CTCTCTCTTATGATTGATAGATTGCATCATTACATAAGAGAACTCCGTAT
ACTAAGAAAGACCAATGAGGTTATTAAGAAACAAAGTCGAAGTTTTGAAG
ATGGCAAAAATGGCAATACAGAGGAACAGAAAACATTGACAGAAATTGCC
ACATTGAAATCCAAAATTAAGAAACTGGAATCTGAATGTGAGACAAAAGG
AAATGAGGCTAAGACTTTAGAAACTGAAGTAGAGACTCTTAAAAAGCAGT
CGGAAGGTTTCCTTATGGAATATGATCGCCTCTTGGAAGACAATCAGAGT
CTTCGGAGTCAGTTGCAGGTCATTGAACAAAGCTCTTTGTAATCCTGATA
ATAAAATAATACATTGTTGAAATATCTAAAAATCAACTCTATCCTTATGT
TTAAATAACTCCTGTTTGAATGTCTCGTACTTTCTTAATGAGATCACATT
TGTATATACTAAGTGTTTGAAACAAATTACCTCTGTTTTAAGCAGCTCAC
ATCTATTATTATGTATGTGAGCCTGTAGCCATATTCTTCAAAATGGTAAG
ATGATCATAGATATTTATT
back to top

Coding sequence (CDS) from alignment at Chr11:11666258..11669076-

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000648 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000648; Name=PvulFLAVERTChr11.1000648; organism=Phaseolus vulgaris; type=CDS; length=639bp; location=Sequence derived from: Chr11:11666258..11669076- (Phaseolus vulgaris
ATGTTGCAGCTACTCTATACTGCAATTTTCAGCGAAATGCTTCTGATTCT
CACCCTCGTTTTCAAAACTCCTCTCAGAAAACTCGTCATCATCTCCCTCG
ATCGGGTTAAACGTGGCCGTGGCCCCATCGTGGTGTCCACGGTGGGCGCC
ACATTGGTGGTGGTTCTCTCTTCCAGCCTCTACAGCATGACCAAGATCCA
GCAACGCACCCTTGAGGCCGGTATACTCAACCCCACCGACCAAGTTCTCA
TGTCCAAACACATGTTGGAAGCTTCTCTCATGGGATTTTTGCTATTTCTC
TCTCTTATGATTGATAGATTGCATCATTACATAAGAGAACTCCGTATACT
AAGAAAGACCAATGAGGTTATTAAGAAACAAAGTCGAAGTTTTGAAGATG
GCAAAAATGGCAATACAGAGGAACAGAAAACATTGACAGAAATTGCCACA
TTGAAATCCAAAATTAAGAAACTGGAATCTGAATGTGAGACAAAAGGAAA
TGAGGCTAAGACTTTAGAAACTGAAGTAGAGACTCTTAAAAAGCAGTCGG
AAGGTTTCCTTATGGAATATGATCGCCTCTTGGAAGACAATCAGAGTCTT
CGGAGTCAGTTGCAGGTCATTGAACAAAGCTCTTTGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR041672Bap31/Bap29_C
IPR008417BAP29/BAP31
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005783endoplasmic reticulum
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport