PvulFLAVERTChr11.1000672
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of PvulFLAVERTChr11.1000672 vs. ExPASy TrEMBL (2024)
Match: tr|V7BLN0|V7BLN0_PHAVU (Lipase OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G000900g PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.050e-19 Identity = 42/50 (84.00%), Postives = 47/50 (94.00%), Query Frame = 0 Query: 46 SVGTLMAFTAFSRGQVFNMLRSAAKLSPIAHMREVNSPIARMFADQLLAE 95 S+GTLMAFTAFS G+VFNMLRSAA LSPIAHMR+VNSPIAR+FADQ +AE Sbjct: 177 SLGTLMAFTAFSGGKVFNMLRSAAMLSPIAHMRQVNSPIARIFADQFVAE 226
BLAST of PvulFLAVERTChr11.1000672 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0K7X6|A0A8T0K7X6_PHAAN (Lipase OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0182980 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.505e-19 Identity = 46/66 (69.70%), Postives = 51/66 (77.27%), Query Frame = 0 Query: 46 SVGTLMAFTAFSRGQVFNMLRSAAKLSPIAHMREVNSPIARMFADQLLAEVRHKQHHLNFNSFIEY 111 S+GTLMAFTAFSRGQV + LRSAA LSPIAHMR+VNSPIAR+FAD LAE HLNF E+ Sbjct: 165 SLGTLMAFTAFSRGQVLDRLRSAALLSPIAHMRQVNSPIARVFADTFLAE------HLNFIGIHEF 224
BLAST of PvulFLAVERTChr11.1000672 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9V8G4|A0A0L9V8G4_PHAAN (Lipase OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g002000 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.073e-19 Identity = 46/66 (69.70%), Postives = 51/66 (77.27%), Query Frame = 0 Query: 46 SVGTLMAFTAFSRGQVFNMLRSAAKLSPIAHMREVNSPIARMFADQLLAEVRHKQHHLNFNSFIEY 111 S+GTLMAFTAFSRGQV + LRSAA LSPIAHMR+VNSPIAR+FAD LAE HLNF E+ Sbjct: 177 SLGTLMAFTAFSRGQVLDRLRSAALLSPIAHMRQVNSPIARVFADTFLAE------HLNFIGIHEF 236
BLAST of PvulFLAVERTChr11.1000672 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3W070|A0A1S3W070_VIGRR (Lipase OS=Vigna radiata var. radiata OX=3916 GN=LOC106779976 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.620e-19 Identity = 46/66 (69.70%), Postives = 51/66 (77.27%), Query Frame = 0 Query: 46 SVGTLMAFTAFSRGQVFNMLRSAAKLSPIAHMREVNSPIARMFADQLLAEVRHKQHHLNFNSFIEY 111 S+GTLMAFTAFSRGQV + LRSAA LSPIAHMR+VNSPIAR+FAD LAE HLNF E+ Sbjct: 177 SLGTLMAFTAFSRGQVLDRLRSAALLSPIAHMRQVNSPIARVFADTFLAE------HLNFIGIGEF 236
BLAST of PvulFLAVERTChr11.1000672 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6KVI4|A0A4D6KVI4_VIGUN (Lipase OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g2114 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 3.644e-17 Identity = 41/50 (82.00%), Postives = 44/50 (88.00%), Query Frame = 0 Query: 46 SVGTLMAFTAFSRGQVFNMLRSAAKLSPIAHMREVNSPIARMFADQLLAE 95 S+GTLMAFTAFSRGQV + LRSAA LSPIAHM EVNSPIAR+FAD LAE Sbjct: 179 SLGTLMAFTAFSRGQVLDRLRSAALLSPIAHMSEVNSPIARIFADTFLAE 228
BLAST of PvulFLAVERTChr11.1000672 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86SKM2|A0AA86SKM2_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS13363 PE=4 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.337e-14 Identity = 37/50 (74.00%), Postives = 45/50 (90.00%), Query Frame = 0 Query: 46 SVGTLMAFTAFSRGQVFNMLRSAAKLSPIAHMREVNSPIARMFADQLLAE 95 S+GTLMAF AFSRGQV++MLRSAA LSPIAH+R ++SP+AR+FAD L AE Sbjct: 177 SLGTLMAFAAFSRGQVYDMLRSAALLSPIAHLRLLSSPVARVFADTLSAE 226
BLAST of PvulFLAVERTChr11.1000672 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151SCL7|A0A151SCL7_CAJCA (Lipase OS=Cajanus cajan OX=3821 GN=KK1_025644 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.039e-10 Identity = 31/50 (62.00%), Postives = 40/50 (80.00%), Query Frame = 0 Query: 46 SVGTLMAFTAFSRGQVFNMLRSAAKLSPIAHMREVNSPIARMFADQLLAE 95 S+GTLMA TAFS+G++ +MLRSAA LSPIAHM ++ SPIA + AD L + Sbjct: 180 SLGTLMALTAFSQGKLMDMLRSAALLSPIAHMHQIASPIATLAADTFLTD 229
BLAST of PvulFLAVERTChr11.1000672 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2P6S1V3|A0A2P6S1V3_ROSCH (Lipase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0157881 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.363e-10 Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 0 Query: 46 SVGTLMAFTAFSRGQVFNMLRSAAKLSPIAHMREVNSPIARMFADQLLAEVRHKQHHLNFNSFIE 110 S+GTL+A AFS+ Q+ NMLRSA LSPIAH+ ++ SP+AR A+ +AE +K + FN +E Sbjct: 181 SLGTLIALGAFSKDQLVNMLRSAVLLSPIAHVGQMTSPLARAAAENFIAEALYKAGYREFNPRLE 245
BLAST of PvulFLAVERTChr11.1000672 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9Q0J6M7|A0A9Q0J6M7_9ROSI (Lipase OS=Turnera subulata OX=218843 GN=Tsubulata_031790 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 6.343e-10 Identity = 29/50 (58.00%), Postives = 39/50 (78.00%), Query Frame = 0 Query: 46 SVGTLMAFTAFSRGQVFNMLRSAAKLSPIAHMREVNSPIARMFADQLLAE 95 S+GTL+AF AFS+GQ+ NMLRSAA LSPIAH+ ++ SP+ + A +AE Sbjct: 183 SLGTLIAFAAFSQGQLLNMLRSAALLSPIAHLNQITSPLTKGAAKSFIAE 232
BLAST of PvulFLAVERTChr11.1000672 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5B7BA55|A0A5B7BA55_DAVIN (Putative triacylglycerol lipase 2-like (Fragment) OS=Davidia involucrata OX=16924 GN=Din_034735 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.803e-10 Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 0 Query: 46 SVGTLMAFTAFSRGQVFNMLRSAAKLSPIAHMREVNSPIARMFADQLLAE 95 S+GTL+A +FSRGQ+FNMLRSAA LSPIA++ ++ SP+A AD +AE Sbjct: 177 SLGTLIALASFSRGQLFNMLRSAALLSPIAYVGQMTSPLATSAADNFIAE 226 The following BLAST results are available for this feature:
BLAST of PvulFLAVERTChr11.1000672 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of PvulFLAVERTChr11.1000672 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of PvulFLAVERTChr11.1000672 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11) Total hits: 0
Sequences
The
following sequences are available for this feature:
mRNA sequence >drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000672 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000672; Name=PvulFLAVERTChr11.1000672; organism=Phaseolus vulgaris; type=mRNA; length=1494bpback to top protein sequence of drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000672 >drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000672 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000672; Name=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000672; organism=Phaseolus vulgaris; type=polypeptide; length=127bpback to top mRNA from alignment at Chr11:12722671..12725507- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000672 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000672; Name=PvulFLAVERTChr11.1000672; organism=Phaseolus vulgaris; type=mRNA; length=2837bp; location=Sequence derived from: Chr11:12722671..12725507- (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr11:12722671..12725507- >drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000672 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000672; Name=PvulFLAVERTChr11.1000672; organism=Phaseolus vulgaris; type=CDS; length=384bp; location=Sequence derived from: Chr11:12722671..12725507- (Phaseolus vulgarisback to top |