PvulFLAVERTChr11.664

Transcript Overview
NamePvulFLAVERTChr11.664
Unique NamedrPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.664
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Sequence length723
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr11chromosomeChr11:13319212..13319934 +Phaseolus vulgaris cv. Flavert genome v1.0n/a
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PvulFLAVERTChr11.664drPhaVulg.Flavert.1.0gene:PvulFLAVERTChr11.664Phaseolus vulgarisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.664.1drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.664.1Phaseolus vulgarisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.664.1drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.664.1Phaseolus vulgarisCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.664drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.664Phaseolus vulgarispolypeptide
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.664drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.664-proteinPhaseolus vulgarispolypeptide


Homology
BLAST of PvulFLAVERTChr11.664 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445M2X9|A0A445M2X9_GLYSO (Endonuclease/exonuclease/phosphatase domain-containing protein (Fragment) OS=Glycine soja OX=3848 GN=D0Y65_001491 PE=4 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.187e-59
Identity = 93/239 (38.91%), Postives = 145/239 (60.67%), Query Frame = 0
Query:    1 MIIVTFNIRGVGGGTKSRYLRHIISCEGAEFVCLQETKVKSISDAKCYSLWGDNKVGWLHYEGENGGGGMLSMWHQEAFIYETHRMGNGYIAVYGRLVKDNLRCVVVNVYAACNLRDKKTLWMELSNIKSSSHEVLWCFCGDFNAIRSHDERRGSTNRVDYTSEIRGFNSFIDDNLLLDTPIMGKNYTWFNSNGSAKSKIDRVLVTEEWMEKWPTCKQYAQRREVSDHCAIVVKSVVRD 239
            M IV++NIRG+  G K   +R ++  +  + +C+ ETK + I  A C +LWGD+ VGW      N  GG+L +W+Q+AF  E    G+G+I + G  +++N +  VVN+Y+ C++  K+  W  L  ++    + LWCF GDFN IR   ER G ++R    + I  FN++I +  L + P +GK +TWF  NG+AKS++DR LV+ +W+ KWP C  +   R  SDHC I++++ V D
Sbjct:   65 MNIVSYNIRGLRRGVKWAAIRRMVRKQKVDMICIHETKRELIDKAACQALWGDSDVGWEFQLVINTAGGLLCVWNQQAFKLERRETGSGFILLEGVWIQENQKTSVVNLYSPCDVHQKRIQWDSLKLLRQQDPDGLWCFMGDFNNIRYQSEREGVSHRGTEATNINDFNNWIAELELEEIPCVGKRFTWFRPNGAAKSRLDRFLVSPKWLHKWPACTNFTLERNFSDHCPIMLRAKVID 303          
BLAST of PvulFLAVERTChr11.664 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445IK09|A0A445IK09_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_026444 PE=4 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 2.581e-58
Identity = 100/239 (41.84%), Postives = 144/239 (60.25%), Query Frame = 0
Query:    1 MIIVTFNIRGVGGGTKSRYLRHIISCEGAEFVCLQETKVKSISDAKCYSLWGDNKVGWLHYEGENGGGGMLSMWHQEAFIYETHRMGNGYIAVYGRLVKDNLRCVVVNVYAACNLRDKKTLWMELSNIKSSSHEVLWCFCGDFNAIRSHDERRGSTNRVDYTSEIRGFNSFIDDNLLLDTPIMGKNYTWFNSNGSAKSKIDRVLVTEEWMEKWPTCKQYAQRREVSDHCAIVVKSVVRD 239
            MII+++N RG+G G K   +R +      + VCLQETK + ++   C S+WGD+ V W      N  GG+L MW+  AF  +    G  ++ + GR  KDNL   +VNVYA C++  K+ LW +L ++K+S+ E  WCF GDFN+IRS DER GS+ R     +  GFN +ID   L +    G  YTW   NGSA+S++DR LV+ +W+ KWP   Q+   R+ SDHC I++K+ + D
Sbjct:  340 MIILSYNCRGLGRGVKWAAIRKLNFKHKVDLVCLQETKKEIVTKVVCQSIWGDDSVSWDSVPSINTAGGLLCMWNNLAFEVDRRVKGTNFLMLAGRWAKDNLLLYIVNVYAPCDIAGKRELWDQLKHLKASNPEGAWCFLGDFNSIRSMDERIGSSQRYVGVHDSAGFNEWIDTMELQEIKSFGNIYTWCRPNGSARSRLDRCLVSVQWLNKWPNSSQHVLNRDYSDHCPILLKTDMLD 578          
BLAST of PvulFLAVERTChr11.664 vs. ExPASy TrEMBL (2024)
Match: tr|G8DCX0|G8DCX0_PHAVU (Putative retrotransposon OS=Phaseolus vulgaris OX=3885 PE=4 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 9.426e-58
Identity = 100/214 (46.73%), Postives = 130/214 (60.75%), Query Frame = 0
Query:   18 RYLRHIISCEGAEFVCLQETKVKSISDAKCYSLWGDNKVGWLHYEGENGGGGMLSMWHQEAFIYETHRMGNGYIAVYGRLVKDNLRCVVVNVYAACNLRDKKTLWMELSNIKSSSHEVLWCFCGDFNAIRSHDERRGSTNRVDYTSEIRGFNSFIDDNLLLDTPIMGKNYTWFNSNGSAKSKIDRVLVTEEWMEKWPTCKQYAQRREVSDHCAI 231
            RY+RH++  E A+FVC+QETK K ISDA+C+S WGDNKVGW+H +GE GGG +LS+WH+E F YE H MG G+I V G+ +K                                             +  S  ER+G  +R D + EI GFN+FI+ N L D P++GK +TWF  +G+AKS+IDR LVTEEW++KWP CKQY  RREVSDHC +
Sbjct:  594 RYIRHLVGKEEADFVCVQETKAKEISDARCFSWWGDNKVGWIHNKGEEGGGSLLSLWHKEVFSYENHLMGKGFIVVIGQHLK---------------------------------------------SSSSRSERKGIRDRSDQSREISGFNNFIESNSLFDLPLVGKKFTWFKPDGTAKSRIDRALVTEEWVQKWPMCKQYVLRREVSDHCTL 762          
BLAST of PvulFLAVERTChr11.664 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TSI2|A0A151TSI2_CAJCA (Endonuclease/exonuclease/phosphatase domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_009250 PE=4 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 3.519e-55
Identity = 95/235 (40.43%), Postives = 137/235 (58.30%), Query Frame = 0
Query:    1 MIIVTFNIRGVGGGTKSRYLRHIISCEGAEFVCLQETKVKSISDAKCYSLWGDNKVGWLHYEGENGGGGMLSMWHQEAFIYETHRMGNGYIAVYGRLVKDNLRCVVVNVYAACNLRDKKTLWMELSNIKSSSHEVLWCFCGDFNAIRSHDERRGSTNRVDYTSE-IRGFNSFIDDNLLLDTPIMGKNYTWFNSNGSAKSKIDRVLVTEEWMEKWPTCKQYAQRREVSDHCAIVVK 234
            M I++FNIRG+GG  K   +R+++  E  + VCLQETK +S+    C SLWG +   W  Y  E   GG++S+W    F  ET  +   +IA+YGR  + NL C VVNVYA C  + KK LW+ L  +        WC  GDFN+++   ER+G    V++  E    F  FI    L+D P+ G+ YTW+  +G+  S+I+R L+T  W+++WP   Q+A  R VSDHC I++K
Sbjct:    1 MKILSFNIRGLGGRLKVVEVRNLVRSENVDMVCLQETKKESVDKKLCASLWGADDFEWAFYPSEGRSGGIVSIWKTSIFKLETSIIQPNFIALYGRWGEQNLDCWVVNVYAPCVQQLKKDLWVRLHALMDEKGGARWCLVGDFNSVKDAKERKGVA--VNFRREKAECFAEFIQKTSLIDLPLSGRKYTWYKPDGTCMSRINRFLITIGWLDQWPNLSQWALSRGVSDHCPIILK 233          
BLAST of PvulFLAVERTChr11.664 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2SAJ0|A0A0B2SAJ0_GLYSO (Endonuclease/exonuclease/phosphatase domain-containing protein (Fragment) OS=Glycine soja OX=3848 GN=glysoja_043147 PE=4 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 8.676e-55
Identity = 83/235 (35.32%), Postives = 139/235 (59.15%), Query Frame = 0
Query:    1 MIIVTFNIRGVGGGTKSRYLRHIISCEGAEFVCLQETKVKSISDAKCYSLWGDNKVGWLHYEGENGGGGMLSMWHQEAFIYETHRMGNGYIAVYGRLVKDNLRCVVVNVYAACNLRDKKTLWMELSNIKSSSHEVLWCFCGDFNAIRSHDERRGSTNRVDYTSEIRGFNSFIDDNLLLDTPIMGKNYTWFNSNGSAKSKIDRVLVTEEWMEKWPTCKQYAQRREVSDHCAIVVKS 235
            M I+T+N RG+G G K   +R +++ +  + +C+QETK + I    C++LWGD  V W      +  GG+L +W ++ F  E   +G  Y+ + G+ ++++    + +VY+ C+++ K+ LW  +  +K   H+ LWC  GDFN  R+H ER G+ +R       R FN +I+D  + + P +G  +TW   NGSA+SK+DR LV+ +W+ KWP   Q+   R  SDHC ++++S
Sbjct:    8 MNIITYNARGLGRGVKWPAIRRLVNKQHVDMLCIQETKKELIDRDICHALWGDPDVQWADQPATHTAGGILCLWSEKVFRMERKIIGPRYVMMSGKWIQEDQSVNIASVYSPCDIQGKRVLWEAIKQLKCQHHDGLWCILGDFNCTRNHTERFGTCHRSLENIGSREFNGWIEDLEVEEPPWVGSKFTWVRPNGSARSKLDRFLVSADWLTKWPGTTQFTLERNFSDHCPLLLRS 242          
BLAST of PvulFLAVERTChr11.664 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2Z6MIT1|A0A2Z6MIT1_TRISU (Reverse transcriptase domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_172690 PE=4 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.783e-54
Identity = 96/233 (41.20%), Postives = 147/233 (63.09%), Query Frame = 0
Query:    1 MIIVTFNIRGVGGGTKSRYLRHIISCEGAEFVCLQETKVKSISDAKCYSLWGDNKVGWLHYEGENGGGGMLSMWHQEAFIYETHRMGNGYIAVYGRLVKDNLRCVVVNVYAACNLRDKKTLWMELSNIKSSSHEVLWCFCGDFNAIRSHDERRGSTNRV--DYTSEIRGFNSFIDDNLLLDTPIMGKNYTWFNSNGSAKSKIDRVLVTEEWMEKWPTCKQYAQRREVSDHCAI 231
            MII +FNIRG+G   K R +R ++  E  +F+ LQETK++ I+D+  +SLWG N  GW         GG+LSMW++         +G G++ V   LV    +C +VNVYA CNLRDK+ LW +L   KS   + LWC  GDFN++R+  ERRG+   V   ++SE+  F+ F+++  L+D PI+G+++TWF+ NG A S++DR+LV+ +W + W +   +   R+V+DHC +
Sbjct:    9 MIISSFNIRGMGSRVKRRKVRDLVRAEQLDFLALQETKMEMITDSVVHSLWGSNDCGWAFLPAVGNSGGILSMWNKVKASLVFTFIGEGFVGVCLDLVGVLRKCFIVNVYAKCNLRDKRRLWGDLLMSKSGFGDGLWCVLGDFNSVRASLERRGAGQIVAGGHSSEMLAFDLFLNNLGLVDLPIIGRSFTWFHPNGVAMSRLDRILVSPDWFDIWGSPNVWVLARDVADHCPL 241          
BLAST of PvulFLAVERTChr11.664 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445H5T2|A0A445H5T2_GLYSO (Transposon TX1 149 kDa protein OS=Glycine soja OX=3848 GN=D0Y65_038654 PE=4 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.930e-54
Identity = 88/235 (37.45%), Postives = 144/235 (61.28%), Query Frame = 0
Query:    1 MIIVTFNIRGVGGGTKSRYLRHIISCEGAEFVCLQETKVKSISDAKCYSLWGDNKVGWLHYEGENGGGGMLSMWHQEAFIYETHRMGNGYIAVYGRLVKDNLRCVVVNVYAACNLRDKKTLWMELSNIKSSSHEVLWCFCGDFNAIRSHDERRGSTNRVDYTSEIRGFNSFIDDNLLLDTPIMGKNYTWFNSNGSAKSKIDRVLVTEEWMEKWPTCKQYAQRREVSDHCAIVVKS 235
            M I ++N+RG+G G K   +R +I+ E  + +CLQETK   I    C ++WG ++V W      N  GG+L MW +  F  +   +GNG+I + G   +++++  +V VY+ C++ +K+ LW  +  +K +S   LWC  GDFN IR+ +ER G ++R+   + ++ FN +I+D  LL+ P +G+ YTWF  NG +KS++DR L++ EW + WP   Q+   R  SDHC I++K+
Sbjct:    1 MNIASYNVRGLGKGVKWAAIRRLINKENIQMLCLQETKKDIIDRTLCQAIWGSDEVKWEMQPAINSAGGILCMWTESVFKLQNKVIGNGFILLEGVCNREDMKIGIVTVYSPCDINNKRLLWDSVKQLKQASQVRLWCVLGDFNCIRNPNERIGKSDRLVGDNSMQEFNEWIEDMELLEVPNVGRQYTWFRPNGESKSRLDRALISPEWRDTWPESVQFTLARNFSDHCPILIKA 235          
BLAST of PvulFLAVERTChr11.664 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2Z6PFV4|A0A2Z6PFV4_TRISU (Reverse transcriptase domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_187280 PE=4 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.712e-53
Identity = 96/236 (40.68%), Postives = 141/236 (59.75%), Query Frame = 0
Query:    1 MIIVTFNIRGVGGGTKSRYLRHIISCEGAEFVCLQETKVKSISDAKCYSLWGDNKVGWLHYEGENGGGGMLSMWHQEAFIYETHRMGNGYIAVYGRLVKDNLRCVVVNVYAACNLRDKKTLWMELSNIKSSSHEVLWCFCGDFNAIRSHDERRGSTNRV--DYTSEIRGFNSFIDDNLLLDTPIMGKNYTWFNSNGSAKSKIDRVLVTEEWMEKWPTCKQYAQRREVSDHCAIVVK 234
            MI+ T NIRG+G   K R +R  +S E  +F+ LQETK++S SD+   SLWG     W         GG++S+W +  F       G+G++ V   +V+D  RC V+NVYA CNL DK+ LW E+   +       WC  GDFNA+R   ERRG+   V    + E+  F+ F+++  L+D P++G+ +TWF+ NG A S++DRVL++ EW+ KW     +A  R+VSDHC +VV+
Sbjct:  753 MIVGTLNIRGLGSRVKRRKVREFVSGEKVDFLALQETKLESFSDSFIQSLWGSENCDWACLPAIGNSGGLISIWKKSLFSVVYTFSGHGFVGVCLDVVQDQSRCFVLNVYAKCNLSDKRRLWGEIIMSRRGFGRGCWCVLGDFNAVRDVSERRGARQLVVNSQSKEVLEFDLFLEELELIDMPLIGRRFTWFHPNGVAMSRLDRVLLSAEWISKWENPNVWALSRDVSDHCPLVVR 988          
BLAST of PvulFLAVERTChr11.664 vs. ExPASy TrEMBL (2024)
Match: tr|A0A392PBC2|A0A392PBC2_9FABA (Endonuclease/exonuclease/phosphatase domain-containing protein (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.975e-53
Identity = 84/239 (35.15%), Postives = 144/239 (60.25%), Query Frame = 0
Query:    1 MIIVTFNIRGVGGGTKSRYLRHIISCEGAEFVCLQETKVKSISDAKCYSLWGDNKVGWLHYEGENGGGGMLSMWHQEAFIYETHRMGNGYIAVYGRLVKDNLRCVVVNVYAACNLRDKKTLWMELSNIKSSSHEVLWCFCGDFNAIRSHDERRGSTNRVDYTSEIRGFNSFIDDNLLLDTPIMGKNYTWFNSNGSAKSKIDRVLVTEEWMEKWPTCKQYAQRREVSDHCAIVVKSVVRD 239
            M I+++N+RG+GG  K + +  +I     + +C+QETK++ +  ++C  +WG N  G+   E E   GGML +W+   F  ++   G+ Y+ V G   ++ +   +VNVYA C    K+ LW +LS++ ++     WC  GDFN+IR   ER+G  + +    E+  F+SFI D+ L+D P++G+ +TW   +GS+ S+IDR L++EEW  +WP   Q+   + +SDHC I+++  V++
Sbjct:    1 MKIISYNVRGLGGVAKKKDVSQLIKKINPDVMCVQETKLQKLERSQCEVMWGSNDFGFSSKESEGRSGGMLMIWNSRKFKMQSESRGDHYLCVQGLWGQEEIPIAIVNVYAPCEAAKKRVLWEKLSDLLATRPGFRWCVLGDFNSIRMEVERKGVGDFM-RREEMIEFDSFITDSELVDLPLIGRKFTWSRIDGSSMSRIDRFLLSEEWCMQWPNSSQWCLEKGLSDHCPILLQDEVKN 238          
BLAST of PvulFLAVERTChr11.664 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445LNP2|A0A445LNP2_GLYSO (Transposon TX1 149 kDa protein OS=Glycine soja OX=3848 GN=D0Y65_003855 PE=4 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 1.008e-52
Identity = 94/239 (39.33%), Postives = 143/239 (59.83%), Query Frame = 0
Query:    1 MIIVTFNIRGVGGGTKSRYLRHIISCEGAEFVCLQETKVKSISDAKCYSLWGDNKVGWLHYEGENGGGGMLSMWHQEAFIYETHRMGNGYIAVYGRLVKDNLRCVVVNVYAACNLRDKKTLWMELSNIKSSSHEVLWCFCGDFNAIRSHDERRGSTNRVDYTSEIRGFNSFIDDNLLLDTPIMGKNYTWFNSNGSAKSKIDRVLVTEEWMEKWPTCKQYAQRREVSDHCAIVVKSVVRD 239
            MII+++N RG+G G K   +R +      + VCLQETK ++I+   C ++WGD+ V W      +  GG+L MW+  AF  +    G  ++ + GR +K+NL+ +++NVYA C+   K+ LW EL  +K+S+ E +WCF  DFN+IRS +ER GS+ R     +  GFN  I D  L +       +TW   NGS +S++DR LV+E+W+ KWP   Q    R+ SDHC I++K+ + D
Sbjct:  709 MIILSYNCRGLGRGVKWAAIRKLNLKYKVDLVCLQETKKENITKLICQNIWGDSNVSWDSVPSIHTAGGLLCMWNNLAFEVDGRVKGRNFLMLVGRWIKENLKLLILNVYAPCDTAGKRELWEELKQLKASNPEGVWCFLEDFNSIRSMEERSGSSQRTVGVYDSAGFNDRISDMELQEIKCFDSRFTWCRPNGSVRSRLDRCLVSEQWLVKWPDSSQQVLHRDYSDHCPILLKTDMVD 947          
The following BLAST results are available for this feature:
BLAST of PvulFLAVERTChr11.664 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A445M2X9|A0A445M2X9_GLYSO1.187e-5938.91Endonuclease/exonuclease/phosphatase domain-contai... [more]
tr|A0A445IK09|A0A445IK09_GLYSO2.581e-5841.84Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|G8DCX0|G8DCX0_PHAVU9.426e-5846.73Putative retrotransposon OS=Phaseolus vulgaris OX=... [more]
tr|A0A151TSI2|A0A151TSI2_CAJCA3.519e-5540.43Endonuclease/exonuclease/phosphatase domain-contai... [more]
tr|A0A0B2SAJ0|A0A0B2SAJ0_GLYSO8.676e-5535.32Endonuclease/exonuclease/phosphatase domain-contai... [more]
tr|A0A2Z6MIT1|A0A2Z6MIT1_TRISU2.783e-5441.20Reverse transcriptase domain-containing protein OS... [more]
tr|A0A445H5T2|A0A445H5T2_GLYSO3.930e-5437.45Transposon TX1 149 kDa protein OS=Glycine soja OX=... [more]
tr|A0A2Z6PFV4|A0A2Z6PFV4_TRISU2.712e-5340.68Reverse transcriptase domain-containing protein OS... [more]
tr|A0A392PBC2|A0A392PBC2_9FABA3.975e-5335.15Endonuclease/exonuclease/phosphatase domain-contai... [more]
tr|A0A445LNP2|A0A445LNP2_GLYSO1.008e-5239.33Transposon TX1 149 kDa protein OS=Glycine soja OX=... [more]
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BLAST of PvulFLAVERTChr11.664 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of PvulFLAVERTChr11.664 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 1..234
e-value: 7.5E-38
score: 132.6
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 1..233
IPR005135Endonuclease/exonuclease/phosphatasePFAMPF03372Exo_endo_phoscoord: 4..228
e-value: 2.8E-10
score: 51.8
NoneNo IPR availablePIRSRPIRSR604808-1PIRSR604808-1coord: 1..233
e-value: 3.9E-8
score: 25.7
NoneNo IPR availablePIRSRPIRSR604808-3PIRSR604808-3coord: 1..233
e-value: 3.9E-8
score: 25.7
NoneNo IPR availablePIRSRPIRSR604808-2PIRSR604808-2coord: 1..233
e-value: 3.9E-8
score: 25.7
NoneNo IPR availablePANTHERPTHR33710BNAC02G09200D PROTEINcoord: 77..234

Analysis Name: InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 1..234
e-value: 7.5E-38
score: 132.6
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 1..233
IPR005135Endonuclease/exonuclease/phosphatasePFAMPF03372Exo_endo_phoscoord: 4..228
e-value: 2.8E-10
score: 51.8
NoneNo IPR availablePIRSRPIRSR604808-1PIRSR604808-1coord: 1..233
e-value: 3.9E-8
score: 25.7
NoneNo IPR availablePIRSRPIRSR604808-3PIRSR604808-3coord: 1..233
e-value: 3.9E-8
score: 25.7
NoneNo IPR availablePIRSRPIRSR604808-2PIRSR604808-2coord: 1..233
e-value: 3.9E-8
score: 25.7
NoneNo IPR availablePANTHERPTHR33710BNAC02G09200D PROTEINcoord: 77..234

Sequences
The following sequences are available for this feature:

mRNA sequence

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.664 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.664; Name=PvulFLAVERTChr11.664; organism=Phaseolus vulgaris; type=mRNA; length=723bp
ATGATTATTGTGACCTTCAATATAAGAGGAGTGGGGGGAGGTACTAAGTC
TAGGTACTTGAGACATATTATATCGTGTGAAGGAGCTGAGTTTGTGTGTT
TGCAAGAAACAAAAGTGAAGTCTATATCTGATGCTAAATGTTACTCTTTG
TGGGGGGATAATAAAGTGGGTTGGTTACACTATGAAGGGGAGAATGGAGG
GGGAGGAATGTTATCTATGTGGCATCAAGAAGCCTTTATATATGAAACTC
ATCGTATGGGAAACGGGTACATTGCGGTATATGGCAGGCTCGTTAAAGAT
AACCTGAGATGTGTTGTGGTCAATGTCTATGCTGCCTGTAACTTGAGAGA
TAAGAAGACCCTGTGGATGGAGCTATCGAATATTAAGTCTAGCTCACATG
AGGTGTTATGGTGTTTCTGTGGTGATTTTAATGCGATCAGAAGTCATGAT
GAAAGGAGAGGTAGTACGAATAGAGTGGATTATACAAGTGAGATTAGAGG
TTTTAATAGCTTCATTGATGATAATCTGTTGCTTGACACTCCTATTATGG
GGAAAAATTATACTTGGTTCAACTCTAATGGGTCGGCAAAGAGCAAAATA
GATAGGGTGTTGGTTACGGAGGAATGGATGGAAAAGTGGCCTACGTGCAA
ACAGTACGCACAACGAAGGGAAGTCTCTGATCATTGTGCCATAGTGGTGA
AATCAGTGGTAAGAGATACCTAA
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protein sequence of drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.664

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.664 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.664; Name=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.664; organism=Phaseolus vulgaris; type=polypeptide; length=240bp
MIIVTFNIRGVGGGTKSRYLRHIISCEGAEFVCLQETKVKSISDAKCYSL
WGDNKVGWLHYEGENGGGGMLSMWHQEAFIYETHRMGNGYIAVYGRLVKD
NLRCVVVNVYAACNLRDKKTLWMELSNIKSSSHEVLWCFCGDFNAIRSHD
ERRGSTNRVDYTSEIRGFNSFIDDNLLLDTPIMGKNYTWFNSNGSAKSKI
DRVLVTEEWMEKWPTCKQYAQRREVSDHCAIVVKSVVRDT
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mRNA from alignment at Chr11:13319212..13319934+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.664 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.664; Name=PvulFLAVERTChr11.664; organism=Phaseolus vulgaris; type=mRNA; length=723bp; location=Sequence derived from: Chr11:13319212..13319934+ (Phaseolus vulgaris
ATGATTATTGTGACCTTCAATATAAGAGGAGTGGGGGGAGGTACTAAGTC TAGGTACTTGAGACATATTATATCGTGTGAAGGAGCTGAGTTTGTGTGTT TGCAAGAAACAAAAGTGAAGTCTATATCTGATGCTAAATGTTACTCTTTG TGGGGGGATAATAAAGTGGGTTGGTTACACTATGAAGGGGAGAATGGAGG GGGAGGAATGTTATCTATGTGGCATCAAGAAGCCTTTATATATGAAACTC ATCGTATGGGAAACGGGTACATTGCGGTATATGGCAGGCTCGTTAAAGAT AACCTGAGATGTGTTGTGGTCAATGTCTATGCTGCCTGTAACTTGAGAGA TAAGAAGACCCTGTGGATGGAGCTATCGAATATTAAGTCTAGCTCACATG AGGTGTTATGGTGTTTCTGTGGTGATTTTAATGCGATCAGAAGTCATGAT GAAAGGAGAGGTAGTACGAATAGAGTGGATTATACAAGTGAGATTAGAGG TTTTAATAGCTTCATTGATGATAATCTGTTGCTTGACACTCCTATTATGG GGAAAAATTATACTTGGTTCAACTCTAATGGGTCGGCAAAGAGCAAAATA GATAGGGTGTTGGTTACGGAGGAATGGATGGAAAAGTGGCCTACGTGCAA ACAGTACGCACAACGAAGGGAAGTCTCTGATCATTGTGCCATAGTGGTGA AATCAGTGGTAAGAGATACCTAA
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Coding sequence (CDS) from alignment at Chr11:13319212..13319934+

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.664 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.664; Name=PvulFLAVERTChr11.664; organism=Phaseolus vulgaris; type=CDS; length=723bp; location=Sequence derived from: Chr11:13319212..13319934+ (Phaseolus vulgaris
ATGATTATTGTGACCTTCAATATAAGAGGAGTGGGGGGAGGTACTAAGTC
TAGGTACTTGAGACATATTATATCGTGTGAAGGAGCTGAGTTTGTGTGTT
TGCAAGAAACAAAAGTGAAGTCTATATCTGATGCTAAATGTTACTCTTTG
TGGGGGGATAATAAAGTGGGTTGGTTACACTATGAAGGGGAGAATGGAGG
GGGAGGAATGTTATCTATGTGGCATCAAGAAGCCTTTATATATGAAACTC
ATCGTATGGGAAACGGGTACATTGCGGTATATGGCAGGCTCGTTAAAGAT
AACCTGAGATGTGTTGTGGTCAATGTCTATGCTGCCTGTAACTTGAGAGA
TAAGAAGACCCTGTGGATGGAGCTATCGAATATTAAGTCTAGCTCACATG
AGGTGTTATGGTGTTTCTGTGGTGATTTTAATGCGATCAGAAGTCATGAT
GAAAGGAGAGGTAGTACGAATAGAGTGGATTATACAAGTGAGATTAGAGG
TTTTAATAGCTTCATTGATGATAATCTGTTGCTTGACACTCCTATTATGG
GGAAAAATTATACTTGGTTCAACTCTAATGGGTCGGCAAAGAGCAAAATA
GATAGGGTGTTGGTTACGGAGGAATGGATGGAAAAGTGGCCTACGTGCAA
ACAGTACGCACAACGAAGGGAAGTCTCTGATCATTGTGCCATAGTGGTGA
AATCAGTGGTAAGAGATACCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf
IPR005135Endo/exonuclease/phosphatase
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity