PvulFLAVERTChr11.1000701

Transcript Overview
NamePvulFLAVERTChr11.1000701
Unique NamedrPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Sequence length1448
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr11chromosomeChr11:14699935..14704282 -Phaseolus vulgaris cv. Flavert genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjpvfL063Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvfL110Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anpvfL0320Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL0427Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL0483Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL0679Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL0887Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjpvfL664Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anpvfL1242Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL1313Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carpvfL006Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carpvfL011Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carpvfL018Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapvfL092Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvfL107Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pspvfL438Pisum sativum Cameor genome v1aPisum sativum
ccapvfL453Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carpvfL567Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
pspvfL784Pisum sativum Cameor genome v1aPisum sativum
ccapvfL761Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvfpvfR125Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfpvfR134Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhR134Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvfhR145Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvrvR125Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvfvrvR133Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvfvfhR201Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvrvR167Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvfvssR151Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvfvssR156Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvfvuR141Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvpvfL121Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvfvuR161Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvfvuR166Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvpvfL444Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvfL486Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
jg43919.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun11g110600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-TanjilR_27370Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Cc_v2.0_23853.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-TanjilR_07190Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.Ca_v2.0_18701Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Va05G044560.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_014638737.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun05g219900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
jg5636.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.Ca_v2.0_02358Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
rna-XM_014655484.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat5g269080.1Pisum sativum Cameor genome v1aPisum sativum
Va08G053420.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Hedin2.R1.6g010120.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Hedin2.R1.1g051600.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-TanjilR_06530Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr05.724Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Phvul.005G108600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Phvul.011G110700.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PvulFLAVERTChr11.1000701drPhaVulg.Flavert.1.0gene:PvulFLAVERTChr11.1000701Phaseolus vulgarisgene


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr11.1000701.0drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr11.1000701.0Phaseolus vulgaristhree_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000701.5drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000701.5Phaseolus vulgarisexon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000701.4drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000701.4Phaseolus vulgarisexon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000701.3drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000701.3Phaseolus vulgarisexon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000701.2drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000701.2Phaseolus vulgarisexon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000701.1drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000701.1Phaseolus vulgarisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000701.5drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000701.5Phaseolus vulgarisCDS
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000701.4drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000701.4Phaseolus vulgarisCDS
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000701.3drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000701.3Phaseolus vulgarisCDS
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000701.2drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000701.2Phaseolus vulgarisCDS
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000701.1drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000701.1Phaseolus vulgarisCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr11.1000701.10drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr11.1000701.10Phaseolus vulgarisfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701Phaseolus vulgarispolypeptide
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701-proteinPhaseolus vulgarispolypeptide


Homology
[Close]
BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy TrEMBL (2024)
Match: tr|V7AID2|V7AID2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G110700g PE=3 SV=1)

HSP 1 Score: 595.504 bits (1534), Expect = 0.000e+0
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0 
Query:    1 MATVTSSFHFSTLIQSSQRNLTLSSNSPTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQQQFSSL 289
            MATVTSSFHFSTLIQSSQRNLTLSSNSPTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQQQFSSL
Sbjct:    1 MATVTSSFHFSTLIQSSQRNLTLSSNSPTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQQQFSSL 289
[Close]
BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SBN2|A0A0S3SBN2_PHAAN (Protein THYLAKOID FORMATION1, chloroplastic OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G140400 PE=3 SV=1)

HSP 1 Score: 576.244 bits (1484), Expect = 0.000e+0
Identity = 283/291 (97.25%), Postives = 283/291 (97.25%), Query Frame = 0 
Query:    1 MATVTSSFHFSTLIQSSQRNLTLSSNSPTLSFR--VGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQQQFSSL 289
            MATVTSSFHFSTL QSSQRN TLSSNSPT  FR  VGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKK EERA PQKTNEAITQQQFSSL
Sbjct:    1 MATVTSSFHFSTLTQSSQRNFTLSSNSPTFRFRFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKTNEAITQQQFSSL 291
[Close]
BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9V5X4|A0A0L9V5X4_PHAAN (Protein THYLAKOID OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0145100 PE=3 SV=1)

HSP 1 Score: 576.244 bits (1484), Expect = 0.000e+0
Identity = 283/291 (97.25%), Postives = 283/291 (97.25%), Query Frame = 0 
Query:    1 MATVTSSFHFSTLIQSSQRNLTLSSNSPTLSFR--VGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQQQFSSL 289
            MATVTSSFHFSTL QSSQRN TLSSNSPT  FR  VGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKK EERA PQKTNEAITQQQFSSL
Sbjct:    1 MATVTSSFHFSTLTQSSQRNFTLSSNSPTFRFRFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKTNEAITQQQFSSL 291
[Close]
BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6LGY5|A0A4D6LGY5_VIGUN (Protein Thf1 OS=Vigna unguiculata OX=3917 GN=DEO72_LG3g2387 PE=3 SV=1)

HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0
Identity = 281/289 (97.23%), Postives = 281/289 (97.23%), Query Frame = 0 
Query:    1 MATVTSSFHFSTLIQSSQRNLTLSSNSPTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQQQFSSL 289
            MATVTSSFHFSTL QSSQRN TLSSNSPT  FRV FSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQN TSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKK EERA PQKTNEAITQQQFSSL
Sbjct:    1 MATVTSSFHFSTLTQSSQRNFTLSSNSPTFRFRVRFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNPTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKTNEAITQQQFSSL 289
[Close]
BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3TKC6|A0A1S3TKC6_VIGRR (Protein THYLAKOID FORMATION1, chloroplastic OS=Vigna radiata var. radiata OX=3916 GN=LOC106756349 PE=3 SV=1)

HSP 1 Score: 573.933 bits (1478), Expect = 0.000e+0
Identity = 281/289 (97.23%), Postives = 282/289 (97.58%), Query Frame = 0 
Query:    1 MATVTSSFHFSTLIQSSQRNLTLSSNSPTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQQQFSSL 289
            MATVTSSFHFSTL QSSQRN TLSSNSPT  FRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSL+EFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKK EERA PQKTNEAIT QQFSSL
Sbjct:    1 MATVTSSFHFSTLTQSSQRNFTLSSNSPTFRFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLIEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKTNEAIT-QQFSSL 288
[Close]
BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86W5R1|A0AA86W5R1_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS31190 PE=4 SV=1)

HSP 1 Score: 558.14 bits (1437), Expect = 0.000e+0
Identity = 276/290 (95.17%), Postives = 277/290 (95.52%), Query Frame = 0 
Query:    1 MATVTSSFHFSTLIQSSQRNLTLSSNS-PTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQQQFSSL 289
            MATVTSSF FSTL Q SQRNLTLSSNS  TL FRVGFSC Y GVRAS+YASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYI ALKEDPEQYRVDAKKLEEWARAQN TSLVEFSSREGEVE ILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKK EERA PQKTNEAITQQQFSSL
Sbjct:    1 MATVTSSFSFSTLTQFSQRNLTLSSNSEATLRFRVGFSCRYFGVRASNYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIHALKEDPEQYRVDAKKLEEWARAQNPTSLVEFSSREGEVEAILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKTNEAITQQQFSSL 290
[Close]
BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TP34|A0A151TP34_CAJCA (Protein THYLAKOID FORMATION1, chloroplastic OS=Cajanus cajan OX=3821 GN=KK1_022453 PE=3 SV=1)

HSP 1 Score: 538.11 bits (1385), Expect = 0.000e+0
Identity = 262/289 (90.66%), Postives = 271/289 (93.77%), Query Frame = 0 
Query:    1 MATVTSSFHFSTLIQSSQRNLTLSSNSPTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQQQFSSL 289
            MA VTSSF FSTL QSS RNL LSSNSPT  FRVGFSCHY+GVRA+++ASK VVRCS+S V+DPPTVSETKLNFLK YKRPIPSIYN+VLQELIVQQHLMRYKRSYRYD VFALGFVTVYEQLMEGYPSDEDRDAIFQAYI+AL EDPEQYRVDAKKLEEWARAQN TSL+EFSSREGEVEG LKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKK EER  PQKTNEAITQQQFS L
Sbjct:    1 MAAVTSSFSFSTLTQSSHRNLKLSSNSPTFRFRVGFSCHYVGVRAANFASKTVVRCSTS-VSDPPTVSETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRSYRYDPVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIQALNEDPEQYRVDAKKLEEWARAQNPTSLIEFSSREGEVEGSLKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERIEPQKTNEAITQQQFSGL 288
[Close]
BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445KGE7|A0A445KGE7_GLYSO (Protein THYLAKOID FORMATION1, chloroplastic OS=Glycine soja OX=3848 GN=D0Y65_016202 PE=3 SV=1)

HSP 1 Score: 531.946 bits (1369), Expect = 0.000e+0
Identity = 267/292 (91.44%), Postives = 276/292 (94.52%), Query Frame = 0 
Query:    1 MATVTSSFHFSTLIQSSQ-RNL-TLSSNSPTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAIT-QQQFSSL 289
            MATVTSSF FSTL QSS  RNL TLSSNSPT   RVGFSCHY+GVRAS+ ASK+VVRCSS+ V +PPTVSETKLNFLK YKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYI+ALKEDPEQYRVDAKKLEEWARAQN TSLV+FSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNV+KRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKK EERA PQK+NEAIT QQQFSSL
Sbjct:    1 MATVTSSFSFSTLTQSSSPRNLSTLSSNSPTFRIRVGFSCHYVGVRASNSASKIVVRCSSA-VAEPPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIQALKEDPEQYRVDAKKLEEWARAQNPTSLVDFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVDKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKSNEAITQQQQFSSL 291
[Close]
BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy TrEMBL (2024)
Match: tr|I1KF75|I1KF75_SOYBN (Protein THYLAKOID FORMATION1, chloroplastic OS=Glycine max OX=3847 GN=100779964 PE=3 SV=1)

HSP 1 Score: 531.946 bits (1369), Expect = 0.000e+0
Identity = 267/292 (91.44%), Postives = 276/292 (94.52%), Query Frame = 0 
Query:    1 MATVTSSFHFSTLIQSSQ-RNL-TLSSNSPTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAIT-QQQFSSL 289
            MATVTSSF FSTL QSS  RNL TLSSNSPT   RVGFSCHY+GVRAS+ ASK+VVRCSS+ V +PPTVSETKLNFLK YKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYI+ALKEDPEQYRVDAKKLEEWARAQN TSLV+FSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNV+KRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKK EERA PQK+NEAIT QQQFSSL
Sbjct:    1 MATVTSSFSFSTLTQSSSPRNLSTLSSNSPTFRIRVGFSCHYVGVRASNSASKIVVRCSSA-VAEPPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIQALKEDPEQYRVDAKKLEEWARAQNPTSLVDFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVDKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKSNEAITQQQQFSSL 291
[Close]
BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445HNW6|A0A445HNW6_GLYSO (Protein THYLAKOID FORMATION1, chloroplastic OS=Glycine soja OX=3848 GN=D0Y65_033946 PE=3 SV=1)

HSP 1 Score: 528.48 bits (1360), Expect = 0.000e+0
Identity = 267/292 (91.44%), Postives = 274/292 (93.84%), Query Frame = 0 
Query:    1 MATVTSSFHFSTLIQSS-QRNLT-LSSNSPTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAIT-QQQFSSL 289
            MATV SSF FSTL QSS QRNLT LSSNSPT  FRVGFSC  +GVRAS+ ASKMVVRCSSS V +PPTVSETKLNFLK YKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYI+ALKEDPEQYRVDAKKLEEWAR+QN  SL+EFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKK EERA PQK+NEAIT QQQFSSL
Sbjct:    1 MATVISSFSFSTLTQSSSQRNLTTLSSNSPTFRFRVGFSCLNVGVRASNSASKMVVRCSSS-VAEPPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIQALKEDPEQYRVDAKKLEEWARSQNPNSLLEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKSNEAITQQQQFSSL 291
[Close]
BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q7XAB8|THF1_SOLTU (Protein THYLAKOID FORMATION1, chloroplastic OS=Solanum tuberosum OX=4113 GN=THF1 PE=2 SV=1)

HSP 1 Score: 395.586 bits (1015), Expect = 1.676e-138
Identity = 198/285 (69.47%), Postives = 233/285 (81.75%), Query Frame = 0 
Query:    1 MATVTSSFHFSTLIQSSQRNLTLSSNS--PTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQ 283
            MA VTS   FS + QS++R  ++SS+    T  FR  FS   + VR+S+  S+ VV C+SSS  D PTV++TKL FL  YKRPIP++YNTVLQELIVQQHL RYK+SY+YD VFALGFVTVY+QLMEGYPS+EDR+AIF+AYI+ALKEDPEQYR DA+KLEEWAR QN+ +LV+FSS+EGE+E I KDIA+RAG K  F YSR FA+GLFRLLELAN  +PTILEKLCA LNVNK+SVDRDLDVYRNLLSKLVQAKELLKEYV+REKKK  ER   QK NE +T+
Sbjct:    1 MAAVTS-VSFSAITQSAERKSSVSSSRSIDTFRFRSNFSFDSVNVRSSNSTSRFVVHCTSSSAADLPTVADTKLKFLTAYKRPIPTVYNTVLQELIVQQHLTRYKKSYQYDPVFALGFVTVYDQLMEGYPSEEDRNAIFKAYIEALKEDPEQYRADAQKLEEWARTQNANTLVDFSSKEGEIENIFKDIAQRAGTKDGFCYSRLFAVGLFRLLELANVTDPTILEKLCAALNVNKKSVDRDLDVYRNLLSKLVQAKELLKEYVEREKKKRGERE-TQKANETVTK 283
[Close]
BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SKT0|THF1_ARATH (Protein THYLAKOID FORMATION 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=THF1 PE=1 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 2.765e-134
Identity = 190/282 (67.38%), Postives = 225/282 (79.79%), Query Frame = 0 
Query:    2 ATVTSSFHFSTLIQSSQRNLTLSSNSPTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQ 283
            AT  SS  F  L QS + +   SS     + R+      L + + S  SK ++ C S+   D P VSETK  FLK YKRPIPSIYNTVLQELIVQQHLMRYK++YRYD VFALGFVTVY+QLMEGYPSD+DRDAIF+AYI+AL EDP+QYR+DA+K+EEWAR+Q S SLV+FSS+EG++E +LKDIA RAG K  FSYSRFFA+GLFRLLELA+A +PT+L+KLCA LN+NK+SVDRDLDVYRNLLSKLVQAKELLKEYV+REKKK  ERA  QK NE I++
Sbjct:    3 ATAISSLSFPALGQSDKISNFASSRPLASAIRICTKFSRLSLNSRS-TSKSLIHCMSNVTADVPPVSETKSKFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMEGYPSDQDRDAIFKAYIEALNEDPKQYRIDAQKMEEWARSQTSASLVDFSSKEGDIEAVLKDIAGRAGSKEGFSYSRFFAVGLFRLLELASATDPTVLDKLCASLNINKKSVDRDLDVYRNLLSKLVQAKELLKEYVEREKKKQGERAQSQKANETISK 283
[Close]
BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q84PB7|THF1_ORYSJ (Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=THF1 PE=2 SV=1)

HSP 1 Score: 372.089 bits (954), Expect = 2.039e-129
Identity = 183/235 (77.87%), Postives = 212/235 (90.21%), Query Frame = 0 
Query:   49 ASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQ 283
             S+ VVRC +++   PPTV+ETK+NFLK YKRPI SIY+TVLQEL+VQQHLMRYK +Y+YDAVFALGFVTVY+QLMEGYPS+EDRDAIF+AYI AL EDPEQYR DA+K+EEWAR+QN  SLVEFSS++GE+E ILKDI+ERA GKG FSYSRFFA+GLFRLLELANA EPTIL+KLCA LN+NKRSVDRDLDVYRN+LSKLVQAKELLKEYV+REKKK EER+   K+NEA+T+
Sbjct:   43 GSRSVVRCVATAGDVPPTVAETKMNFLKSYKRPILSIYSTVLQELLVQQHLMRYKTTYQYDAVFALGFVTVYDQLMEGYPSNEDRDAIFKAYITALNEDPEQYRADAQKMEEWARSQNGNSLVEFSSKDGEIEAILKDISERAQGKGSFSYSRFFAVGLFRLLELANATEPTILDKLCAALNINKRSVDRDLDVYRNILSKLVQAKELLKEYVEREKKKREERSETPKSNEAVTK 277
[Close]
BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy Swiss-Prot (2024)
Match: sp|B0C3M8|THF1_ACAM1 (Protein Thf1 OS=Acaryochloris marina (strain MBIC 11017) OX=329726 GN=thf1 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.181e-42
Identity = 78/216 (36.11%), Postives = 134/216 (62.04%), Query Frame = 0 
Query:   66 TVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEF-----SSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAM----EPTILE---KLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIE 269
            TVS+TK  F   + RP+ S+Y  V++EL+V+ HL+R    +RYD +FALG  T +++ M+GY  + D+DAIF A  KA + DP Q + D ++L E A+++++  ++++     +S   E++  L++IA+       F YSR FAIGLF LLEL+       E ++ E    +C VLN+++  + +DL++YR  L K+ Q ++ + + ++ +KK+ E
Sbjct:    6 TVSDTKRAFYSIHTRPVNSVYRRVVEELMVEMHLLRVNEDFRYDPIFALGVTTSFDRFMDGYQPENDKDAIFSAICKAQEADPVQMKKDGQRLTELAQSKSAQEMLDWITQAANSGGDELQWQLRNIAQNPK----FKYSRLFAIGLFTLLELSEGNITQDEESLAEFLPNICTVLNISESKLQKDLEIYRGNLDKIAQVRQAMDDILEAQKKRRE 217
[Close]
BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy Swiss-Prot (2024)
Match: sp|B8HQ62|THF1_CYAP4 (Protein Thf1 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=thf1 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 3.796e-40
Identity = 84/233 (36.05%), Postives = 137/233 (58.80%), Query Frame = 0 
Query:   61 VTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERA-GGKGDFSYSRFFAIGLFRLLELANAMEP----------TILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAIT 282
            + +P TVS+TK  F   + RPI SIY  V++EL+V+ HL+R  +++ YD VFALG VT +E+ M+GY    D+ +IF A   A + DP+Q + DA++L    R Q+  SL+++ S    + G  +    RA      F YSR FA+GLF LLE A   EP           +L+++  V+++    + +DL+ YR+ L K+ QA++ L++ V  E+K+ ++ A P ++ E+ +
Sbjct:    1 MNNPRTVSDTKRAFYHNHARPINSIYRRVVEELLVEIHLLRVNQTFVYDPVFALGVVTTFERFMQGYHPPADQTSIFNAICLAQELDPQQVQQDAQELLGRVRGQSLESLLDWISTAASLGGDEQQNRLRAIASNPTFKYSRLFAVGLFTLLEQA---EPELGKDEARLLQVLQQVGEVMHLPVEKMQKDLEQYRSNLEKMTQARKTLEDIVAAERKRRQQNAAPDRSPESAS 230
[Close]
BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q116P5|THF1_TRIEI (Protein Thf1 OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=thf1 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.757e-38
Identity = 76/221 (34.39%), Postives = 127/221 (57.47%), Query Frame = 0 
Query:   61 VTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGI--LKDIAERAGGKGDFSYSRFFAIGLFRLLELANA-------MEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERA 272
            + +  TVS+TK  F   + RPI SIYN V++EL+V+ HL+     Y Y+  +ALG VT +++ M+GY   ED+ +IF A I+  +EDP +YR DAK LE+ A   +++ ++ +      ++    L+D          F YSR FAIGLF LLE+ +             L+K+C  LN+ +  + +D+D+Y + L ++ QA+  +++ +   +KK E+R+
Sbjct:    1 MNNTRTVSDTKKTFYHFHTRPINSIYNRVIEELLVEMHLISVNVDYSYNPFYALGVVTAFDRFMQGYSPQEDKTSIFNALIQGQEEDPNKYRSDAKGLEDLAGKISASDILSWICLSKNIDNTQYLQDDLRAISENSKFRYSRLFAIGLFTLLEIVDTELIKEQEKRTEALKKICQSLNLVEEKLLKDIDLYLSNLERVAQARSAMEDTLAAMRKKREKRS 221
[Close]
BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8YZ41|THF1_NOSS1 (Protein Thf1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=thf1 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.984e-36
Identity = 74/219 (33.79%), Postives = 131/219 (59.82%), Query Frame = 0 
Query:   66 TVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSS------REGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANA-------MEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEER 271
            TVS+TK  F   + RPI +IY  V++EL+V+ HL+     + Y+ ++ALG VT +++ MEGY  + D+++IF A  +A++++P++YR DA++L+  A++     LV + S      ++ +++  L+ IA       +F YSR FAIGLF LLE +N             L+ + A L+++     +DL++YR+ L K+ QA  ++ + +  ++KK E+R
Sbjct:    6 TVSDTKRTFYALHTRPINTIYRRVVEELMVEMHLLSVNVDFSYNPIYALGVVTTFDRFMEGYQPERDKESIFSAICQAVEQEPQRYRQDAERLQAVAQSLPVNDLVAWLSQANHLQQDADLQAQLQAIA----NNSNFKYSRLFAIGLFTLLEQSNPDLVKDEKQRTEALKSIAAGLHLSDDKFSKDLELYRSNLDKMTQALAVMADMLTADRKKREQR 220
[Close]
BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy Swiss-Prot (2024)
Match: sp|B2J353|THF1_NOSP7 (Protein Thf1 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=thf1 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 6.597e-36
Identity = 76/234 (32.48%), Postives = 136/234 (58.12%), Query Frame = 0 
Query:   66 TVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLV------EFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAM----EPTILEKLCAV---LNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEER-------AGPQKTNE 279
            TVS+TK  F   + RPI +IY  V++EL+V+ HL+     + Y+ ++ALG VT +++ M+GY  + D+++IF A  +A+++DP+ YR DA++L+  A+      L+       +  R+ +++  L+ IA       +F Y+R FAIG+F LLE ++      E  + E L A+   L+V+   +++DL++YR+ L K+ QA  ++ + +  ++KK E+R         P  +NE
Sbjct:    6 TVSDTKRTFYNLHTRPINTIYRRVVEELMVEMHLLSVNIDFSYNPIYALGVVTTFDRFMQGYEPERDQESIFNALCRAIEQDPQHYRQDAERLQAIAKGLPVKDLIGWLGQTTYLDRDADLQAQLQAIA----NNPNFKYNRLFAIGVFSLLEQSDPELVKDEKQLTEALKAIAAGLHVSDDKLNKDLELYRSNLDKMAQALVVMADMLSADRKKREQRKQQSTAPVAPPSSNE 235
[Close]
BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q3M4B2|THF1_TRIV2 (Protein Thf1 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=thf1 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 8.525e-36
Identity = 73/219 (33.33%), Postives = 132/219 (60.27%), Query Frame = 0 
Query:   66 TVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSS------REGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANA-------MEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEER 271
            TVS+TK  F   + RPI +IY  V++EL+V+ HL+     + Y+ ++ALG VT +++ M+GY  + D+++IF A  +A++++P++YR DA++L+  A++     LV + S      ++ +++  L+ IA       +F YSR FAIGLF LLE +N             L+ + A L+++   + +DL++YR+ L K+ QA  ++ + +  ++KK E+R
Sbjct:    6 TVSDTKRTFYALHTRPINTIYRRVVEELMVEMHLLSVNVDFSYNPIYALGVVTTFDRFMQGYQPERDKESIFSAICQAVEQEPQRYRQDAERLKAVAQSLPVNDLVAWLSQANHLQQDADLQAQLQAIA----SNPNFKYSRLFAIGLFTLLEQSNPDLVKDEKQRTEALKTIAAGLHLSDDKLSKDLELYRSNLDKMTQALAVMADMLTADRKKREQR 220
[Close]
BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q5N664|THF1_SYNP6 (Protein Thf1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=thf1 PE=3 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 3.095e-35
Identity = 74/221 (33.48%), Postives = 123/221 (55.66%), Query Frame = 0 
Query:   61 VTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSRE---GEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELAN---AMEPTILEKLCAVL----NVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEER 271
            +T  PTVS++K  F   Y RPI  +Y  V++EL+V+ HL+    S+ YD +FALG VT ++  M  Y   E    +F A  +A++++PEQYR DA  + E  R   S ++ ++ +     G    +++   +   G+ +F YSR FAIGLF LLE A      +P  L+     +    ++    + +DLD+YR+ L K+ QA+  ++E +  +++K E+R
Sbjct:    1 MTSVPTVSDSKRAFYAAYPRPINPLYRRVVEELLVEIHLLSVNTSFVYDPLFALGVVTAFDSFMSSYRPIEAVGPLFTALTQAVRQNPEQYRHDANAIAEQVRGVGSDTIRQWLTEAEALGNAPELVRSSFQAIAGRSEFKYSRLFAIGLFSLLETAAPDLVQDPEALKTTVTAIAERFHLPSDKLQKDLDLYRSNLEKMEQARITMEEAIQADRRKREQR 221
[Close]
BLAST of PvulFLAVERTChr11.1000701 vs. Araport11
Match: | (Symbols: THF1, PSB29 | THYLAKOID FORMATION1, photosystem II reaction center PSB29 protein | chr2:8987783-8989185 FORWARD LENGTH=300)

HSP 1 Score: 385.185 bits (988), Expect = 2.894e-135
Identity = 190/282 (67.38%), Postives = 225/282 (79.79%), Query Frame = 0 
Query:    2 ATVTSSFHFSTLIQSSQRNLTLSSNSPTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQ 283
            AT  SS  F  L QS + +   SS     + R+      L + + S  SK ++ C S+   D P VSETK  FLK YKRPIPSIYNTVLQELIVQQHLMRYK++YRYD VFALGFVTVY+QLMEGYPSD+DRDAIF+AYI+AL EDP+QYR+DA+K+EEWAR+Q S SLV+FSS+EG++E +LKDIA RAG K  FSYSRFFA+GLFRLLELA+A +PT+L+KLCA LN+NK+SVDRDLDVYRNLLSKLVQAKELLKEYV+REKKK  ERA  QK NE I++
Sbjct:    3 ATAISSLSFPALGQSDKISNFASSRPLASAIRICTKFSRLSLNSRS-TSKSLIHCMSNVTADVPPVSETKSKFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMEGYPSDQDRDAIFKAYIEALNEDPKQYRIDAQKMEEWARSQTSASLVDFSSKEGDIEAVLKDIAGRAGSKEGFSYSRFFAVGLFRLLELASATDPTVLDKLCASLNINKKSVDRDLDVYRNLLSKLVQAKELLKEYVEREKKKQGERAQSQKANETISK 283
The following BLAST results are available for this feature:
BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|V7AID2|V7AID2_PHAVU0.000e+0100.00Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A0S3SBN2|A0A0S3SBN2_PHAAN0.000e+097.25Protein THYLAKOID FORMATION1, chloroplastic OS=Vig... [more]
tr|A0A0L9V5X4|A0A0L9V5X4_PHAAN0.000e+097.25Protein THYLAKOID OS=Phaseolus angularis OX=3914 G... [more]
tr|A0A4D6LGY5|A0A4D6LGY5_VIGUN0.000e+097.23Protein Thf1 OS=Vigna unguiculata OX=3917 GN=DEO72... [more]
tr|A0A1S3TKC6|A0A1S3TKC6_VIGRR0.000e+097.23Protein THYLAKOID FORMATION1, chloroplastic OS=Vig... [more]
tr|A0AA86W5R1|A0AA86W5R1_9FABA0.000e+095.17Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A151TP34|A0A151TP34_CAJCA0.000e+090.66Protein THYLAKOID FORMATION1, chloroplastic OS=Caj... [more]
tr|A0A445KGE7|A0A445KGE7_GLYSO0.000e+091.44Protein THYLAKOID FORMATION1, chloroplastic OS=Gly... [more]
tr|I1KF75|I1KF75_SOYBN0.000e+091.44Protein THYLAKOID FORMATION1, chloroplastic OS=Gly... [more]
tr|A0A445HNW6|A0A445HNW6_GLYSO0.000e+091.44Protein THYLAKOID FORMATION1, chloroplastic OS=Gly... [more]
back to top
BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q7XAB8|THF1_SOLTU1.676e-13869.47Protein THYLAKOID FORMATION1, chloroplastic OS=Sol... [more]
sp|Q9SKT0|THF1_ARATH2.765e-13467.38Protein THYLAKOID FORMATION 1, chloroplastic OS=Ar... [more]
sp|Q84PB7|THF1_ORYSJ2.039e-12977.87Protein THYLAKOID FORMATION1, chloroplastic OS=Ory... [more]
sp|B0C3M8|THF1_ACAM13.181e-4236.11Protein Thf1 OS=Acaryochloris marina (strain MBIC ... [more]
sp|B8HQ62|THF1_CYAP43.796e-4036.05Protein Thf1 OS=Cyanothece sp. (strain PCC 7425 / ... [more]
sp|Q116P5|THF1_TRIEI4.757e-3834.39Protein Thf1 OS=Trichodesmium erythraeum (strain I... [more]
sp|Q8YZ41|THF1_NOSS11.984e-3633.79Protein Thf1 OS=Nostoc sp. (strain PCC 7120 / SAG ... [more]
sp|B2J353|THF1_NOSP76.597e-3632.48Protein Thf1 OS=Nostoc punctiforme (strain ATCC 29... [more]
sp|Q3M4B2|THF1_TRIV28.525e-3633.33Protein Thf1 OS=Trichormus variabilis (strain ATCC... [more]
sp|Q5N664|THF1_SYNP63.095e-3533.48Protein Thf1 OS=Synechococcus sp. (strain ATCC 271... [more]
back to top
BLAST of PvulFLAVERTChr11.1000701 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
|2.894e-13567.38Symbols: THF1, PSB29 | THYLAKOID FORMATION1, photo... [more]
back to top
InterPro
Analysis Name: Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017499Protein Thf1NCBIFAMTIGR03060PS_II_psb29coord: 62..267
e-value: 9.9E-42
score: 154.6
IPR017499Protein Thf1PFAMPF11264ThylakoidFormatcoord: 66..271
e-value: 3.0E-71
score: 251.1
IPR017499Protein Thf1PANTHERPTHR34793PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTICcoord: 1..284
IPR017499Protein Thf1HAMAPMF_01843Thf1coord: 61..269
score: 21.552982

Analysis Name: InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017499Protein Thf1NCBIFAMTIGR03060PS_II_psb29coord: 62..267
e-value: 9.9E-42
score: 154.6
IPR017499Protein Thf1PFAMPF11264ThylakoidFormatcoord: 66..271
e-value: 3.0E-71
score: 251.1
IPR017499Protein Thf1PANTHERPTHR34793PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTICcoord: 1..284
IPR017499Protein Thf1HAMAPMF_01843Thf1coord: 61..269
score: 21.552982

Sequences
The following sequences are available for this feature:

mRNA sequence

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701; Name=PvulFLAVERTChr11.1000701; organism=Phaseolus vulgaris; type=mRNA; length=1448bp
GCTTTTTGATTATTTTACAAAGAAATTACATGTTTCCACGTGTCATTATA
CCATTGTCTCCTTGGATAAGCTTGTCTTTGCTGCAATTCACAAAAGCCTC
ACTTTCCCCAACCCAAAGAAGCAAAGCAATGCCTCTCTGTCTGTGAATAT
TTTCACTGCTATGCCGCAAAACTTCTGATCCCGGCCACcacacactctct
ctctctttctctccgATGGCCACTGTTACTTCTTCTTTCCATTTCTCCAC
TCTCATCCAATCTTCTCAGAGGAACCTCACCCTCTCTTCCAATTCACCAA
CCTTAAGCTTCCGCGTTGGTTTCTCATGCCACTATCTTGGAGTTCGAGCT
TCCAGTTATGCTTCCAAAATGGTTGTTCGCTGCTCCTCTTCCTCTGTCAC
AGACCCTCCAACTGTTTCTGAGACAAAGTTAAATTTTCTCAAGGAATATA
AGCGACCAATTCCTAGTATCTACAACACGGTGCTGCAAGAGCTTATTGTT
CAGCAACATCTAATGAGATACAAGAGATCATATCGCTATGATGCTGTATT
TGCCCTTGGCTTTGTCACTGTATACGAGCAACTCATGGAAGGGTATCCAA
GTGATGAGGACCGAGATGCCATCTTCCAAGCATACATTAAGGCATTGAAA
GAAGATCCTGAACAATACAGAGTAGATGCAAAGAAATTAGAAGAATGGGC
TCGAGCACAAAACTCAACTTCACTAGTTGAGTTCTCATCCAGAGAAGGAG
AAGTTGAGGGAATATTAAAGGATATTGCAGAAAGAGCAGGAGGAAAGGGG
GATTTCAGTTACAGTCGTTTCTTTGCAATAGGCCTCTTTCGCCTTCTTGA
GTTAGCAAATGCTATGGAACCAACAATTTTGGAAAAGCTTTGTGCGGTGT
TGAATGTCAACAAAAGGAGTGTGGATCGGGACTTGGATGTGTATCGTAAC
TTGCTTTCTAAGTTGGTTCAAGCTAAAGAGTTGCTAAAGGAATATGTTGA
CAGggagaaaaagaaaatagaagaaaGGGCTGGACCACAAAAGACTAATG
AGGCCATTACACAACAGCAATTTTCTAGCCTTTAGTTATGGGGTTTCCTC
TGTAATGATAACCTTGTAAGAGTTGGTATTCTTGACTTGCTCTTTTTTTT
GTTGGTCATGTACATTGGGTGAATCAGAATGGGGCACTTCTATCATCATG
GTTTTGCATACTGTACTTGATGTATCTTCTTCCATGGTGATCCAGCTAAA
TCCTGCTTTCTGCTCAACCACAATTTACCTTTCCAACAGTCTTGTGTAAT
CTTCTCTCctacatgtattttttttccacAAGTTCGCAGATCTATTGTAG
TTCAAATACACGCGGGAAAGCATATGTGGTAATTGAAATTGGAATTCTTC
ATATTTCAGaatctaacattttttggagTGAATGTCTGGTTTACATCT
back to top

protein sequence of drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701; Name=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701; organism=Phaseolus vulgaris; type=polypeptide; length=289bp
MATVTSSFHFSTLIQSSQRNLTLSSNSPTLSFRVGFSCHYLGVRASSYAS
KMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLM
RYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQ
YRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYS
RFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKL
VQAKELLKEYVDREKKKIEERAGPQKTNEAITQQQFSSL
back to top

mRNA from alignment at Chr11:14699935..14704282-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701; Name=PvulFLAVERTChr11.1000701; organism=Phaseolus vulgaris; type=mRNA; length=4348bp; location=Sequence derived from: Chr11:14699935..14704282- (Phaseolus vulgaris
GCTTTTTGATTATTTTACAAAGAAATTACATGTTTCCACGTGTCATTATA
CCATTGTCTCCTTGGATAAGCTTGTCTTTGCTGCAATTCACAAAAGCCTC
ACTTTCCCCAACCCAAAGAAGCAAAGCAATGCCTCTCTGTCTGTGAATAT
TTTCACTGCTATGCCGCAAAACTTCTGATCCCGGCCACCACACACTCTCT
CTCTCTTTCTCTCCGATGGCCACTGTTACTTCTTCTTTCCATTTCTCCAC
TCTCATCCAATCTTCTCAGAGGAACCTCACCCTCTCTTCCAATTCACCAA
CCTTAAGCTTCCGCGTTGGTTTCTCATGCCACTATCTTGGAGTTCGAGCT
TCCAGTTATGCTTCCAAAATGGTTGTTCGCTGCTCCTCTTCCTCTGTCAC
AGGTTTGTTTTGTTCCCCACTAAGTGAGGCAAAAAGGGTACAATATGAGT
TTTGAGCTCCTTTTGGTTCTCCGAGAATTGGGTTGTTTTCAATTTTTGTT
TTTTAAGGTTTGGAGTTGAAAATGATGTTTTAATTGCAGGTGTATGGTTG
TCAATTTTTAAGTCTGTTTTTTAAATTTGGTTTTGCAACCGGATTTTTAA
GGAGGAATTTGTCTTTTGAGGATAATGTTGCAATTGAAACTGTGGTTGAT
GAGGTTTGAACATAGTTTTAGAGTTCTTTTGTAACAAGTGGATGAAATTC
CTTGTGGCTCTTTGTACAATTGACTGGGAAATTTTCTGGATTAATGCCAC
CGTGTTGTGTTTGTGATGATTTTTTGTGTGTGAACGTCAAACTGAAATTC
TTTGCAGCTCTTTCTTGCAGAGATGAGTATAGTTTCGATTTTCAATGTTA
TCAGAAAGTGATTTGGTTTTTATTATGAAGATGTTACTTAGAATCATGTT
AGTGACCATGTGATGTAGTGTCAAATGGTTCCAAATTAGGTTCCTTTGTC
GTTCTAATATTCATAGTGCTACATGGGAAAAAGTAATAAAATATGAAATG
GAATATTGTTATCACAGTTGGTTGGTTATGGGTTGTTTACTTTACACACT
TGATCTGCAGACCCTCCAACTGTTTCTGAGACAAAGTTAAATTTTCTCAA
GGAATATAAGCGACCAATTCCTAGTATCTACAACACGGTGCTGCAAGAGC
TTATTGTTCAGCAACATCTAATGAGATACAAGAGATCATATCGCTATGAT
GCTGTATTTGCCCTTGGCTTTGTCACTGTATACGAGCAACTCATGGAAGG
GTATCCAAGTGATGAGGACCGAGATGCCATCTTCCAAGCATACATTAAGG
CATTGAAAGAAGATCCTGAACAATACAGGTTAAAATATTGAATAATTTGG
ACTTTTCTACCCCGTCCCCCACTTCCATTTCTGTGATTCCTATTCCAAAC
CATCGACTTACTGATAAAGAATTGTGAACTAATAATGGCTATAAGCCACT
AGAAACTGTTTCACTTAAACTCACCAAAGCCCTAATGCTGTGTGCTTGGG
AGACATTTGGGTGTTTCCAAAATCATGTTAGCAGTTGCTGCAAATTGTGG
AACATGATTTTGTGATTTGTGAATCAGGTTTGGTGTGCTTTACTCCAAGC
ATGACATTAGAGTTTTAGCACCCAAAATCATGTTTTAGGCTATCGATACC
CATACTATTGTTTAAATATTATTGAAGAGAAATGTGGTACACTCAAATGA
CTCCCTGCTTGAATAATAAATTCTGATGTATTATCTGCTGTTTGCAATTT
GACTGCAATTGGAAGGTATAGTACTAACTGACAAAATATCCTCGATTATT
GCTGTGAAGTGAAAAATAGAGTTCTGAAATTTAATCTGCATGTTTAAAAG
TAGAAGAATAAATTACTTTTCCTAAGACCTGTTGAAGGAAAAAAATTAGC
TGAAATACAAGGACCATTGTCTGTGCTCTGTAAAAAATTGTTATATCAAC
TGGATAGACTGCAATTTCGTTGAATTCTTATTGTAAGTAATTATTTTCTA
CATTTCCCTCTACAGAGTAGATGCAAAGAAATTAGAAGAATGGGCTCGAG
CACAAAACTCAACTTCACTAGTTGAGTTCTCATCCAGAGAAGGAGAAGTT
GAGGGAATATTAAAGGATATTGCAGAAAGAGCAGGAGGAAAGGGGGATTT
CAGTTACAGTCGTTTCTTTGCAATAGGCCTCTTTCGCCTTCTTGAGTTAG
CAAATGCTATGGAACCAACAATTTTGGAAAAGGTTACCCAATTCATTTAA
GGCATCATGTTATTGATTTGATTTCTATATATATATATATATATATATTA
ATAATTTGAAGTTTAGATTGCCAAGTCTATTTCTCATTCATACCAGTCTA
GAAAACAAAATTCAAGACTTTCGAACTTTTTAGACATATTTGTTCTGGCC
TGTTTGGGTTAGCTGCAATAATGGTCTTGATACGGTCTCAATTCAAGTTC
AGGCCTTATTGATGGAATTATTCCCATGATTTTCTTTAATCTACATAAAA
TATTGACTTCATTATTTTTCTTCTGCTGAAATAATTGTATGACATTTGGA
GACGAACACTCCATCTTTTGTAATAAACGTTTAGGACCTTAAGATTATTG
TTTGCAATAGAAATCAAATTCTATATCAGCAGAATAAATGTGCACACTCA
ATGATTTAAGGAGATTTGACAATGTATCTGCGTCCTCAGGATCAGAATAG
TTGTTTCTATTATTATTTAATAAGTAGGCTTGACATATATATATATATAT
ACATATATGTATGTATGTATGTATATATATAACAGTACAGGTTTACATTA
TCACCTGTGTATTTTGTCTGGCAGTAGAATTAGTCATAAACAATTATAGG
CATCAAAATCACAGATAAAACTAACAATTTGAGCATAGGAGATGATACGA
CAATGGAATAGTGGAGGATGCATTTAATACCATGATTATGAGTAAAACCA
TCTACTTTCTACCGCTTACTTACTTTCTATATAGGATTGTTTATCAATCA
ATCTCTGGTCTTAATCCAACAGCTTTGTGCGGTGTTGAATGTCAACAAAA
GGAGTGTGGATCGGGACTTGGATGTGTATCGTAACTTGCTTTCTAAGTTG
GTTCAAGCTAAAGAGTTGCTAAAGGAATATGTTGACAGGTAAAATATTAG
ATCTAGGCATCTTGCAATGTTATTTCGTGAATTTAGTGAGTTATCATCTT
GCAATGCTATTTAGTGAAAATTCCCTTCTCAAGAGTTTTCATCCCTTGAT
AGAATCTACGAATGTTGCATTTATTTAGTGATTTTTTCTCCCGTCTAAAC
CTTTTAGTCTGCAGTTGTAAATCTACTAATTCTTTAGTAGTTTAGCCCAT
CAAGCTCATGGACACATTATTCCAAACTTTGGTATTAACTTAGTAAAATT
TGAGGTGGTTAGCCCCGGCCTATTTATGAAGCTCTTTAGTTTTTAGACAG
ATTCAACATTCCATTCCAAATATCATATTTAGAAAAGGGTATGATTACAG
ACTATCTAGTTAGTGAGAAACATTCGTATCAAGGTGACTTTCAAACTTTT
TGCCGAATATATGGATAAAATATGTTTTTGTTTCTTTATAATTTTTAAAG
TTCAATTTAGTTTCTCTAAAAAGTTCTATATAACTTTTTTCTCCTAATTT
TGAAACAGAGACTAAAATCACATTTTAGCCTAAATATATTGTATTCAAGT
TATTTTACCACCGAGACCAAGCTTAGATCCCATATGCTCCATAATGCTTG
CAGTAGCCTGTGTTTGTGTTTGATACCATTATCTGCTCAGCAGTCAGCAT
TTGGATTCCTTTACCTGAACTGTTGTTCTAGTAGATGTTATATTTACCTT
GTTTCGTTTTCATCCGCAAGATCTTGATTCTTTGAAATAATCTTTTGCTT
CAGGGAGAAAAAGAAAATAGAAGAAAGGGCTGGACCACAAAAGACTAATG
AGGCCATTACACAACAGCAATTTTCTAGCCTTTAGTTATGGGGTTTCCTC
TGTAATGATAACCTTGTAAGAGTTGGTATTCTTGACTTGCTCTTTTTTTT
GTTGGTCATGTACATTGGGTGAATCAGAATGGGGCACTTCTATCATCATG
GTTTTGCATACTGTACTTGATGTATCTTCTTCCATGGTGATCCAGCTAAA
TCCTGCTTTCTGCTCAACCACAATTTACCTTTCCAACAGTCTTGTGTAAT
CTTCTCTCCTACATGTATTTTTTTTCCACAAGTTCGCAGATCTATTGTAG
TTCAAATACACGCGGGAAAGCATATGTGGTAATTGAAATTGGAATTCTTC
ATATTTCAGAATCTAACATTTTTTGGAGTGAATGTCTGGTTTACATCT
back to top

Coding sequence (CDS) from alignment at Chr11:14699935..14704282-

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701; Name=PvulFLAVERTChr11.1000701; organism=Phaseolus vulgaris; type=CDS; length=870bp; location=Sequence derived from: Chr11:14699935..14704282- (Phaseolus vulgaris
ATGGCCACTGTTACTTCTTCTTTCCATTTCTCCACTCTCATCCAATCTTC
TCAGAGGAACCTCACCCTCTCTTCCAATTCACCAACCTTAAGCTTCCGCG
TTGGTTTCTCATGCCACTATCTTGGAGTTCGAGCTTCCAGTTATGCTTCC
AAAATGGTTGTTCGCTGCTCCTCTTCCTCTGTCACAGACCCTCCAACTGT
TTCTGAGACAAAGTTAAATTTTCTCAAGGAATATAAGCGACCAATTCCTA
GTATCTACAACACGGTGCTGCAAGAGCTTATTGTTCAGCAACATCTAATG
AGATACAAGAGATCATATCGCTATGATGCTGTATTTGCCCTTGGCTTTGT
CACTGTATACGAGCAACTCATGGAAGGGTATCCAAGTGATGAGGACCGAG
ATGCCATCTTCCAAGCATACATTAAGGCATTGAAAGAAGATCCTGAACAA
TACAGAGTAGATGCAAAGAAATTAGAAGAATGGGCTCGAGCACAAAACTC
AACTTCACTAGTTGAGTTCTCATCCAGAGAAGGAGAAGTTGAGGGAATAT
TAAAGGATATTGCAGAAAGAGCAGGAGGAAAGGGGGATTTCAGTTACAGT
CGTTTCTTTGCAATAGGCCTCTTTCGCCTTCTTGAGTTAGCAAATGCTAT
GGAACCAACAATTTTGGAAAAGCTTTGTGCGGTGTTGAATGTCAACAAAA
GGAGTGTGGATCGGGACTTGGATGTGTATCGTAACTTGCTTTCTAAGTTG
GTTCAAGCTAAAGAGTTGCTAAAGGAATATGTTGACAGGGAGAAAAAGAA
AATAGAAGAAAGGGCTGGACCACAAAAGACTAATGAGGCCATTACACAAC
AGCAATTTTCTAGCCTTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR017499Thf1
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis
GO:0010207photosystem II assembly