PvulFLAVERTChr11.1000701

Transcript Overview


Name	PvulFLAVERTChr11.1000701
Unique Name	drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701
Type	mRNA
Organism	Phaseolus vulgaris (Common bean)
Sequence length	1448

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr11	chromosome	Chr11:14699935..14704282 -	Phaseolus vulgaris cv. Flavert genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Phaseolus vulgaris cv. Flavert genome v1.0	2024-07-01
Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL	2024-08-19
Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot	2024-08-19
Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11	2024-08-19
InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0	2024-08-19

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
avjpvfL063	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjpvfL110	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anpvfL0320	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anpvfL0427	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anpvfL0483	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anpvfL0679	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anpvfL0887	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjpvfL664	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anpvfL1242	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anpvfL1313	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
carpvfL006	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
carpvfL011	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
carpvfL018	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
ccapvfL092	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccapvfL107	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
pspvfL438	Pisum sativum Cameor genome v1a	Pisum sativum
ccapvfL453	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
carpvfL567	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
pspvfL784	Pisum sativum Cameor genome v1a	Pisum sativum
ccapvfL761	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
pvfpvfR125	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
pvfpvfR134	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
pvfvfhR134	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
pvfvfhR145	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
pvfvrvR125	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
pvfvrvR133	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
pvfvfhR201	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
pvfvrvR167	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
pvfvssR151	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
pvfvssR156	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
pvfvuR141	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
pvpvfL121	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
pvfvuR161	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
pvfvuR166	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
pvpvfL444	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
pvpvfL486	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris

Orthologs


Gene/Transcript	Assembly	Species
jg43919.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Vigun11g110600.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
rna-TanjilR_27370	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Cc_v2.0_23853.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
rna-TanjilR_07190	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
evm.Ca_v2.0_18701	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
Va05G044560.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
rna-XM_014638737.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
Vigun05g219900.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
jg5636.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
evm.Ca_v2.0_02358	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
rna-XM_014655484.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
Psat5g269080.1	Pisum sativum Cameor genome v1a	Pisum sativum
Va08G053420.2	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
Vfaba.Hedin2.R1.6g010120.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
Vfaba.Hedin2.R1.1g051600.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
rna-TanjilR_06530	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
PvulFLAVERTChr05.724	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
Phvul.005G108600.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Phvul.011G110700.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
PvulFLAVERTChr11.1000701	drPhaVulg.Flavert.1.0gene:PvulFLAVERTChr11.1000701	Phaseolus vulgaris	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr11.1000701.0	drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr11.1000701.0	Phaseolus vulgaris	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000701.5	drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000701.5	Phaseolus vulgaris	exon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000701.4	drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000701.4	Phaseolus vulgaris	exon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000701.3	drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000701.3	Phaseolus vulgaris	exon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000701.2	drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000701.2	Phaseolus vulgaris	exon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000701.1	drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000701.1	Phaseolus vulgaris	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000701.5	drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000701.5	Phaseolus vulgaris	CDS
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000701.4	drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000701.4	Phaseolus vulgaris	CDS
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000701.3	drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000701.3	Phaseolus vulgaris	CDS
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000701.2	drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000701.2	Phaseolus vulgaris	CDS
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000701.1	drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000701.1	Phaseolus vulgaris	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr11.1000701.10	drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr11.1000701.10	Phaseolus vulgaris	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701	drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701	Phaseolus vulgaris	polypeptide
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701	drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701-protein	Phaseolus vulgaris	polypeptide

Homology

[Close]

BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy TrEMBL (2024)
Match: tr|V7AID2|V7AID2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G110700g PE=3 SV=1)

HSP 1 Score: 595.504 bits (1534), Expect = 0.000e+0
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0

Query:    1 MATVTSSFHFSTLIQSSQRNLTLSSNSPTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQQQFSSL 289
            MATVTSSFHFSTLIQSSQRNLTLSSNSPTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQQQFSSL
Sbjct:    1 MATVTSSFHFSTLIQSSQRNLTLSSNSPTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQQQFSSL 289

[Close]

BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SBN2|A0A0S3SBN2_PHAAN (Protein THYLAKOID FORMATION1, chloroplastic OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G140400 PE=3 SV=1)

HSP 1 Score: 576.244 bits (1484), Expect = 0.000e+0
Identity = 283/291 (97.25%), Postives = 283/291 (97.25%), Query Frame = 0

Query:    1 MATVTSSFHFSTLIQSSQRNLTLSSNSPTLSFR--VGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQQQFSSL 289
            MATVTSSFHFSTL QSSQRN TLSSNSPT  FR  VGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKK EERA PQKTNEAITQQQFSSL
Sbjct:    1 MATVTSSFHFSTLTQSSQRNFTLSSNSPTFRFRFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKTNEAITQQQFSSL 291

[Close]

BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9V5X4|A0A0L9V5X4_PHAAN (Protein THYLAKOID OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0145100 PE=3 SV=1)

HSP 1 Score: 576.244 bits (1484), Expect = 0.000e+0
Identity = 283/291 (97.25%), Postives = 283/291 (97.25%), Query Frame = 0

Query:    1 MATVTSSFHFSTLIQSSQRNLTLSSNSPTLSFR--VGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQQQFSSL 289
            MATVTSSFHFSTL QSSQRN TLSSNSPT  FR  VGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKK EERA PQKTNEAITQQQFSSL
Sbjct:    1 MATVTSSFHFSTLTQSSQRNFTLSSNSPTFRFRFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKTNEAITQQQFSSL 291

[Close]

BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6LGY5|A0A4D6LGY5_VIGUN (Protein Thf1 OS=Vigna unguiculata OX=3917 GN=DEO72_LG3g2387 PE=3 SV=1)

HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0
Identity = 281/289 (97.23%), Postives = 281/289 (97.23%), Query Frame = 0

Query:    1 MATVTSSFHFSTLIQSSQRNLTLSSNSPTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQQQFSSL 289
            MATVTSSFHFSTL QSSQRN TLSSNSPT  FRV FSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQN TSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKK EERA PQKTNEAITQQQFSSL
Sbjct:    1 MATVTSSFHFSTLTQSSQRNFTLSSNSPTFRFRVRFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNPTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKTNEAITQQQFSSL 289

[Close]

BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3TKC6|A0A1S3TKC6_VIGRR (Protein THYLAKOID FORMATION1, chloroplastic OS=Vigna radiata var. radiata OX=3916 GN=LOC106756349 PE=3 SV=1)

HSP 1 Score: 573.933 bits (1478), Expect = 0.000e+0
Identity = 281/289 (97.23%), Postives = 282/289 (97.58%), Query Frame = 0

Query:    1 MATVTSSFHFSTLIQSSQRNLTLSSNSPTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQQQFSSL 289
            MATVTSSFHFSTL QSSQRN TLSSNSPT  FRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSL+EFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKK EERA PQKTNEAIT QQFSSL
Sbjct:    1 MATVTSSFHFSTLTQSSQRNFTLSSNSPTFRFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLIEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKTNEAIT-QQFSSL 288

[Close]

BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86W5R1|A0AA86W5R1_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS31190 PE=4 SV=1)

HSP 1 Score: 558.14 bits (1437), Expect = 0.000e+0
Identity = 276/290 (95.17%), Postives = 277/290 (95.52%), Query Frame = 0

Query:    1 MATVTSSFHFSTLIQSSQRNLTLSSNS-PTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQQQFSSL 289
            MATVTSSF FSTL Q SQRNLTLSSNS  TL FRVGFSC Y GVRAS+YASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYI ALKEDPEQYRVDAKKLEEWARAQN TSLVEFSSREGEVE ILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKK EERA PQKTNEAITQQQFSSL
Sbjct:    1 MATVTSSFSFSTLTQFSQRNLTLSSNSEATLRFRVGFSCRYFGVRASNYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIHALKEDPEQYRVDAKKLEEWARAQNPTSLVEFSSREGEVEAILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKTNEAITQQQFSSL 290

[Close]

BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TP34|A0A151TP34_CAJCA (Protein THYLAKOID FORMATION1, chloroplastic OS=Cajanus cajan OX=3821 GN=KK1_022453 PE=3 SV=1)

HSP 1 Score: 538.11 bits (1385), Expect = 0.000e+0
Identity = 262/289 (90.66%), Postives = 271/289 (93.77%), Query Frame = 0

Query:    1 MATVTSSFHFSTLIQSSQRNLTLSSNSPTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQQQFSSL 289
            MA VTSSF FSTL QSS RNL LSSNSPT  FRVGFSCHY+GVRA+++ASK VVRCS+S V+DPPTVSETKLNFLK YKRPIPSIYN+VLQELIVQQHLMRYKRSYRYD VFALGFVTVYEQLMEGYPSDEDRDAIFQAYI+AL EDPEQYRVDAKKLEEWARAQN TSL+EFSSREGEVEG LKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKK EER  PQKTNEAITQQQFS L
Sbjct:    1 MAAVTSSFSFSTLTQSSHRNLKLSSNSPTFRFRVGFSCHYVGVRAANFASKTVVRCSTS-VSDPPTVSETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRSYRYDPVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIQALNEDPEQYRVDAKKLEEWARAQNPTSLIEFSSREGEVEGSLKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERIEPQKTNEAITQQQFSGL 288

[Close]

BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445KGE7|A0A445KGE7_GLYSO (Protein THYLAKOID FORMATION1, chloroplastic OS=Glycine soja OX=3848 GN=D0Y65_016202 PE=3 SV=1)

HSP 1 Score: 531.946 bits (1369), Expect = 0.000e+0
Identity = 267/292 (91.44%), Postives = 276/292 (94.52%), Query Frame = 0

Query:    1 MATVTSSFHFSTLIQSSQ-RNL-TLSSNSPTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAIT-QQQFSSL 289
            MATVTSSF FSTL QSS  RNL TLSSNSPT   RVGFSCHY+GVRAS+ ASK+VVRCSS+ V +PPTVSETKLNFLK YKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYI+ALKEDPEQYRVDAKKLEEWARAQN TSLV+FSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNV+KRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKK EERA PQK+NEAIT QQQFSSL
Sbjct:    1 MATVTSSFSFSTLTQSSSPRNLSTLSSNSPTFRIRVGFSCHYVGVRASNSASKIVVRCSSA-VAEPPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIQALKEDPEQYRVDAKKLEEWARAQNPTSLVDFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVDKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKSNEAITQQQQFSSL 291

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BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy TrEMBL (2024)
Match: tr|I1KF75|I1KF75_SOYBN (Protein THYLAKOID FORMATION1, chloroplastic OS=Glycine max OX=3847 GN=100779964 PE=3 SV=1)

HSP 1 Score: 531.946 bits (1369), Expect = 0.000e+0
Identity = 267/292 (91.44%), Postives = 276/292 (94.52%), Query Frame = 0

Query:    1 MATVTSSFHFSTLIQSSQ-RNL-TLSSNSPTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAIT-QQQFSSL 289
            MATVTSSF FSTL QSS  RNL TLSSNSPT   RVGFSCHY+GVRAS+ ASK+VVRCSS+ V +PPTVSETKLNFLK YKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYI+ALKEDPEQYRVDAKKLEEWARAQN TSLV+FSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNV+KRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKK EERA PQK+NEAIT QQQFSSL
Sbjct:    1 MATVTSSFSFSTLTQSSSPRNLSTLSSNSPTFRIRVGFSCHYVGVRASNSASKIVVRCSSA-VAEPPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIQALKEDPEQYRVDAKKLEEWARAQNPTSLVDFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVDKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKSNEAITQQQQFSSL 291

[Close]

BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445HNW6|A0A445HNW6_GLYSO (Protein THYLAKOID FORMATION1, chloroplastic OS=Glycine soja OX=3848 GN=D0Y65_033946 PE=3 SV=1)

HSP 1 Score: 528.48 bits (1360), Expect = 0.000e+0
Identity = 267/292 (91.44%), Postives = 274/292 (93.84%), Query Frame = 0

Query:    1 MATVTSSFHFSTLIQSS-QRNLT-LSSNSPTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAIT-QQQFSSL 289
            MATV SSF FSTL QSS QRNLT LSSNSPT  FRVGFSC  +GVRAS+ ASKMVVRCSSS V +PPTVSETKLNFLK YKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYI+ALKEDPEQYRVDAKKLEEWAR+QN  SL+EFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKK EERA PQK+NEAIT QQQFSSL
Sbjct:    1 MATVISSFSFSTLTQSSSQRNLTTLSSNSPTFRFRVGFSCLNVGVRASNSASKMVVRCSSS-VAEPPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIQALKEDPEQYRVDAKKLEEWARSQNPNSLLEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKSNEAITQQQQFSSL 291

[Close]

BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q7XAB8|THF1_SOLTU (Protein THYLAKOID FORMATION1, chloroplastic OS=Solanum tuberosum OX=4113 GN=THF1 PE=2 SV=1)

HSP 1 Score: 395.586 bits (1015), Expect = 1.676e-138
Identity = 198/285 (69.47%), Postives = 233/285 (81.75%), Query Frame = 0

Query:    1 MATVTSSFHFSTLIQSSQRNLTLSSNS--PTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQ 283
            MA VTS   FS + QS++R  ++SS+    T  FR  FS   + VR+S+  S+ VV C+SSS  D PTV++TKL FL  YKRPIP++YNTVLQELIVQQHL RYK+SY+YD VFALGFVTVY+QLMEGYPS+EDR+AIF+AYI+ALKEDPEQYR DA+KLEEWAR QN+ +LV+FSS+EGE+E I KDIA+RAG K  F YSR FA+GLFRLLELAN  +PTILEKLCA LNVNK+SVDRDLDVYRNLLSKLVQAKELLKEYV+REKKK  ER   QK NE +T+
Sbjct:    1 MAAVTS-VSFSAITQSAERKSSVSSSRSIDTFRFRSNFSFDSVNVRSSNSTSRFVVHCTSSSAADLPTVADTKLKFLTAYKRPIPTVYNTVLQELIVQQHLTRYKKSYQYDPVFALGFVTVYDQLMEGYPSEEDRNAIFKAYIEALKEDPEQYRADAQKLEEWARTQNANTLVDFSSKEGEIENIFKDIAQRAGTKDGFCYSRLFAVGLFRLLELANVTDPTILEKLCAALNVNKKSVDRDLDVYRNLLSKLVQAKELLKEYVEREKKKRGERE-TQKANETVTK 283

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BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SKT0|THF1_ARATH (Protein THYLAKOID FORMATION 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=THF1 PE=1 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 2.765e-134
Identity = 190/282 (67.38%), Postives = 225/282 (79.79%), Query Frame = 0

Query:    2 ATVTSSFHFSTLIQSSQRNLTLSSNSPTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQ 283
            AT  SS  F  L QS + +   SS     + R+      L + + S  SK ++ C S+   D P VSETK  FLK YKRPIPSIYNTVLQELIVQQHLMRYK++YRYD VFALGFVTVY+QLMEGYPSD+DRDAIF+AYI+AL EDP+QYR+DA+K+EEWAR+Q S SLV+FSS+EG++E +LKDIA RAG K  FSYSRFFA+GLFRLLELA+A +PT+L+KLCA LN+NK+SVDRDLDVYRNLLSKLVQAKELLKEYV+REKKK  ERA  QK NE I++
Sbjct:    3 ATAISSLSFPALGQSDKISNFASSRPLASAIRICTKFSRLSLNSRS-TSKSLIHCMSNVTADVPPVSETKSKFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMEGYPSDQDRDAIFKAYIEALNEDPKQYRIDAQKMEEWARSQTSASLVDFSSKEGDIEAVLKDIAGRAGSKEGFSYSRFFAVGLFRLLELASATDPTVLDKLCASLNINKKSVDRDLDVYRNLLSKLVQAKELLKEYVEREKKKQGERAQSQKANETISK 283

[Close]

BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q84PB7|THF1_ORYSJ (Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=THF1 PE=2 SV=1)

HSP 1 Score: 372.089 bits (954), Expect = 2.039e-129
Identity = 183/235 (77.87%), Postives = 212/235 (90.21%), Query Frame = 0

Query:   49 ASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQ 283
             S+ VVRC +++   PPTV+ETK+NFLK YKRPI SIY+TVLQEL+VQQHLMRYK +Y+YDAVFALGFVTVY+QLMEGYPS+EDRDAIF+AYI AL EDPEQYR DA+K+EEWAR+QN  SLVEFSS++GE+E ILKDI+ERA GKG FSYSRFFA+GLFRLLELANA EPTIL+KLCA LN+NKRSVDRDLDVYRN+LSKLVQAKELLKEYV+REKKK EER+   K+NEA+T+
Sbjct:   43 GSRSVVRCVATAGDVPPTVAETKMNFLKSYKRPILSIYSTVLQELLVQQHLMRYKTTYQYDAVFALGFVTVYDQLMEGYPSNEDRDAIFKAYITALNEDPEQYRADAQKMEEWARSQNGNSLVEFSSKDGEIEAILKDISERAQGKGSFSYSRFFAVGLFRLLELANATEPTILDKLCAALNINKRSVDRDLDVYRNILSKLVQAKELLKEYVEREKKKREERSETPKSNEAVTK 277

[Close]

BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy Swiss-Prot (2024)
Match: sp|B0C3M8|THF1_ACAM1 (Protein Thf1 OS=Acaryochloris marina (strain MBIC 11017) OX=329726 GN=thf1 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.181e-42
Identity = 78/216 (36.11%), Postives = 134/216 (62.04%), Query Frame = 0

Query:   66 TVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEF-----SSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAM----EPTILE---KLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIE 269
            TVS+TK  F   + RP+ S+Y  V++EL+V+ HL+R    +RYD +FALG  T +++ M+GY  + D+DAIF A  KA + DP Q + D ++L E A+++++  ++++     +S   E++  L++IA+       F YSR FAIGLF LLEL+       E ++ E    +C VLN+++  + +DL++YR  L K+ Q ++ + + ++ +KK+ E
Sbjct:    6 TVSDTKRAFYSIHTRPVNSVYRRVVEELMVEMHLLRVNEDFRYDPIFALGVTTSFDRFMDGYQPENDKDAIFSAICKAQEADPVQMKKDGQRLTELAQSKSAQEMLDWITQAANSGGDELQWQLRNIAQNPK----FKYSRLFAIGLFTLLELSEGNITQDEESLAEFLPNICTVLNISESKLQKDLEIYRGNLDKIAQVRQAMDDILEAQKKRRE 217

[Close]

BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy Swiss-Prot (2024)
Match: sp|B8HQ62|THF1_CYAP4 (Protein Thf1 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=thf1 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 3.796e-40
Identity = 84/233 (36.05%), Postives = 137/233 (58.80%), Query Frame = 0

Query:   61 VTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERA-GGKGDFSYSRFFAIGLFRLLELANAMEP----------TILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAIT 282
            + +P TVS+TK  F   + RPI SIY  V++EL+V+ HL+R  +++ YD VFALG VT +E+ M+GY    D+ +IF A   A + DP+Q + DA++L    R Q+  SL+++ S    + G  +    RA      F YSR FA+GLF LLE A   EP           +L+++  V+++    + +DL+ YR+ L K+ QA++ L++ V  E+K+ ++ A P ++ E+ +
Sbjct:    1 MNNPRTVSDTKRAFYHNHARPINSIYRRVVEELLVEIHLLRVNQTFVYDPVFALGVVTTFERFMQGYHPPADQTSIFNAICLAQELDPQQVQQDAQELLGRVRGQSLESLLDWISTAASLGGDEQQNRLRAIASNPTFKYSRLFAVGLFTLLEQA---EPELGKDEARLLQVLQQVGEVMHLPVEKMQKDLEQYRSNLEKMTQARKTLEDIVAAERKRRQQNAAPDRSPESAS 230

[Close]

BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q116P5|THF1_TRIEI (Protein Thf1 OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=thf1 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.757e-38
Identity = 76/221 (34.39%), Postives = 127/221 (57.47%), Query Frame = 0

Query:   61 VTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGI--LKDIAERAGGKGDFSYSRFFAIGLFRLLELANA-------MEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERA 272
            + +  TVS+TK  F   + RPI SIYN V++EL+V+ HL+     Y Y+  +ALG VT +++ M+GY   ED+ +IF A I+  +EDP +YR DAK LE+ A   +++ ++ +      ++    L+D          F YSR FAIGLF LLE+ +             L+K+C  LN+ +  + +D+D+Y + L ++ QA+  +++ +   +KK E+R+
Sbjct:    1 MNNTRTVSDTKKTFYHFHTRPINSIYNRVIEELLVEMHLISVNVDYSYNPFYALGVVTAFDRFMQGYSPQEDKTSIFNALIQGQEEDPNKYRSDAKGLEDLAGKISASDILSWICLSKNIDNTQYLQDDLRAISENSKFRYSRLFAIGLFTLLEIVDTELIKEQEKRTEALKKICQSLNLVEEKLLKDIDLYLSNLERVAQARSAMEDTLAAMRKKREKRS 221

[Close]

BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8YZ41|THF1_NOSS1 (Protein Thf1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=thf1 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.984e-36
Identity = 74/219 (33.79%), Postives = 131/219 (59.82%), Query Frame = 0

Query:   66 TVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSS------REGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANA-------MEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEER 271
            TVS+TK  F   + RPI +IY  V++EL+V+ HL+     + Y+ ++ALG VT +++ MEGY  + D+++IF A  +A++++P++YR DA++L+  A++     LV + S      ++ +++  L+ IA       +F YSR FAIGLF LLE +N             L+ + A L+++     +DL++YR+ L K+ QA  ++ + +  ++KK E+R
Sbjct:    6 TVSDTKRTFYALHTRPINTIYRRVVEELMVEMHLLSVNVDFSYNPIYALGVVTTFDRFMEGYQPERDKESIFSAICQAVEQEPQRYRQDAERLQAVAQSLPVNDLVAWLSQANHLQQDADLQAQLQAIA----NNSNFKYSRLFAIGLFTLLEQSNPDLVKDEKQRTEALKSIAAGLHLSDDKFSKDLELYRSNLDKMTQALAVMADMLTADRKKREQR 220

[Close]

BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy Swiss-Prot (2024)
Match: sp|B2J353|THF1_NOSP7 (Protein Thf1 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=thf1 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 6.597e-36
Identity = 76/234 (32.48%), Postives = 136/234 (58.12%), Query Frame = 0

Query:   66 TVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLV------EFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAM----EPTILEKLCAV---LNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEER-------AGPQKTNE 279
            TVS+TK  F   + RPI +IY  V++EL+V+ HL+     + Y+ ++ALG VT +++ M+GY  + D+++IF A  +A+++DP+ YR DA++L+  A+      L+       +  R+ +++  L+ IA       +F Y+R FAIG+F LLE ++      E  + E L A+   L+V+   +++DL++YR+ L K+ QA  ++ + +  ++KK E+R         P  +NE
Sbjct:    6 TVSDTKRTFYNLHTRPINTIYRRVVEELMVEMHLLSVNIDFSYNPIYALGVVTTFDRFMQGYEPERDQESIFNALCRAIEQDPQHYRQDAERLQAIAKGLPVKDLIGWLGQTTYLDRDADLQAQLQAIA----NNPNFKYNRLFAIGVFSLLEQSDPELVKDEKQLTEALKAIAAGLHVSDDKLNKDLELYRSNLDKMAQALVVMADMLSADRKKREQRKQQSTAPVAPPSSNE 235

[Close]

BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q3M4B2|THF1_TRIV2 (Protein Thf1 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=thf1 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 8.525e-36
Identity = 73/219 (33.33%), Postives = 132/219 (60.27%), Query Frame = 0

Query:   66 TVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSS------REGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANA-------MEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEER 271
            TVS+TK  F   + RPI +IY  V++EL+V+ HL+     + Y+ ++ALG VT +++ M+GY  + D+++IF A  +A++++P++YR DA++L+  A++     LV + S      ++ +++  L+ IA       +F YSR FAIGLF LLE +N             L+ + A L+++   + +DL++YR+ L K+ QA  ++ + +  ++KK E+R
Sbjct:    6 TVSDTKRTFYALHTRPINTIYRRVVEELMVEMHLLSVNVDFSYNPIYALGVVTTFDRFMQGYQPERDKESIFSAICQAVEQEPQRYRQDAERLKAVAQSLPVNDLVAWLSQANHLQQDADLQAQLQAIA----SNPNFKYSRLFAIGLFTLLEQSNPDLVKDEKQRTEALKTIAAGLHLSDDKLSKDLELYRSNLDKMTQALAVMADMLTADRKKREQR 220

[Close]

BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q5N664|THF1_SYNP6 (Protein Thf1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=thf1 PE=3 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 3.095e-35
Identity = 74/221 (33.48%), Postives = 123/221 (55.66%), Query Frame = 0

Query:   61 VTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSRE---GEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELAN---AMEPTILEKLCAVL----NVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEER 271
            +T  PTVS++K  F   Y RPI  +Y  V++EL+V+ HL+    S+ YD +FALG VT ++  M  Y   E    +F A  +A++++PEQYR DA  + E  R   S ++ ++ +     G    +++   +   G+ +F YSR FAIGLF LLE A      +P  L+     +    ++    + +DLD+YR+ L K+ QA+  ++E +  +++K E+R
Sbjct:    1 MTSVPTVSDSKRAFYAAYPRPINPLYRRVVEELLVEIHLLSVNTSFVYDPLFALGVVTAFDSFMSSYRPIEAVGPLFTALTQAVRQNPEQYRHDANAIAEQVRGVGSDTIRQWLTEAEALGNAPELVRSSFQAIAGRSEFKYSRLFAIGLFSLLETAAPDLVQDPEALKTTVTAIAERFHLPSDKLQKDLDLYRSNLEKMEQARITMEEAIQADRRKREQR 221

[Close]

BLAST of PvulFLAVERTChr11.1000701 vs. Araport11
Match: | (Symbols: THF1, PSB29 | THYLAKOID FORMATION1, photosystem II reaction center PSB29 protein | chr2:8987783-8989185 FORWARD LENGTH=300)

HSP 1 Score: 385.185 bits (988), Expect = 2.894e-135
Identity = 190/282 (67.38%), Postives = 225/282 (79.79%), Query Frame = 0

Query:    2 ATVTSSFHFSTLIQSSQRNLTLSSNSPTLSFRVGFSCHYLGVRASSYASKMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKIEERAGPQKTNEAITQ 283
            AT  SS  F  L QS + +   SS     + R+      L + + S  SK ++ C S+   D P VSETK  FLK YKRPIPSIYNTVLQELIVQQHLMRYK++YRYD VFALGFVTVY+QLMEGYPSD+DRDAIF+AYI+AL EDP+QYR+DA+K+EEWAR+Q S SLV+FSS+EG++E +LKDIA RAG K  FSYSRFFA+GLFRLLELA+A +PT+L+KLCA LN+NK+SVDRDLDVYRNLLSKLVQAKELLKEYV+REKKK  ERA  QK NE I++
Sbjct:    3 ATAISSLSFPALGQSDKISNFASSRPLASAIRICTKFSRLSLNSRS-TSKSLIHCMSNVTADVPPVSETKSKFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMEGYPSDQDRDAIFKAYIEALNEDPKQYRIDAQKMEEWARSQTSASLVDFSSKEGDIEAVLKDIAGRAGSKEGFSYSRFFAVGLFRLLELASATDPTVLDKLCASLNINKKSVDRDLDVYRNLLSKLVQAKELLKEYVEREKKKQGERAQSQKANETISK 283

The following BLAST results are available for this feature:

BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy TrEMBL (2024)
BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy Swiss-Prot (2024)
BLAST of PvulFLAVERTChr11.1000701 vs. Araport11

BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
tr\|V7AID2\|V7AID2_PHAVU	0.000e+0	100.00	Uncharacterized protein OS=Phaseolus vulgaris OX=3...	[more]
tr\|A0A0S3SBN2\|A0A0S3SBN2_PHAAN	0.000e+0	97.25	Protein THYLAKOID FORMATION1, chloroplastic OS=Vig...	[more]
tr\|A0A0L9V5X4\|A0A0L9V5X4_PHAAN	0.000e+0	97.25	Protein THYLAKOID OS=Phaseolus angularis OX=3914 G...	[more]
tr\|A0A4D6LGY5\|A0A4D6LGY5_VIGUN	0.000e+0	97.23	Protein Thf1 OS=Vigna unguiculata OX=3917 GN=DEO72...	[more]
tr\|A0A1S3TKC6\|A0A1S3TKC6_VIGRR	0.000e+0	97.23	Protein THYLAKOID FORMATION1, chloroplastic OS=Vig...	[more]
tr\|A0AA86W5R1\|A0AA86W5R1_9FABA	0.000e+0	95.17	Uncharacterized protein OS=Sphenostylis stenocarpa...	[more]
tr\|A0A151TP34\|A0A151TP34_CAJCA	0.000e+0	90.66	Protein THYLAKOID FORMATION1, chloroplastic OS=Caj...	[more]
tr\|A0A445KGE7\|A0A445KGE7_GLYSO	0.000e+0	91.44	Protein THYLAKOID FORMATION1, chloroplastic OS=Gly...	[more]
tr\|I1KF75\|I1KF75_SOYBN	0.000e+0	91.44	Protein THYLAKOID FORMATION1, chloroplastic OS=Gly...	[more]
tr\|A0A445HNW6\|A0A445HNW6_GLYSO	0.000e+0	91.44	Protein THYLAKOID FORMATION1, chloroplastic OS=Gly...	[more]

BLAST of PvulFLAVERTChr11.1000701 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
sp\|Q7XAB8\|THF1_SOLTU	1.676e-138	69.47	Protein THYLAKOID FORMATION1, chloroplastic OS=Sol...	[more]
sp\|Q9SKT0\|THF1_ARATH	2.765e-134	67.38	Protein THYLAKOID FORMATION 1, chloroplastic OS=Ar...	[more]
sp\|Q84PB7\|THF1_ORYSJ	2.039e-129	77.87	Protein THYLAKOID FORMATION1, chloroplastic OS=Ory...	[more]
sp\|B0C3M8\|THF1_ACAM1	3.181e-42	36.11	Protein Thf1 OS=Acaryochloris marina (strain MBIC ...	[more]
sp\|B8HQ62\|THF1_CYAP4	3.796e-40	36.05	Protein Thf1 OS=Cyanothece sp. (strain PCC 7425 / ...	[more]
sp\|Q116P5\|THF1_TRIEI	4.757e-38	34.39	Protein Thf1 OS=Trichodesmium erythraeum (strain I...	[more]
sp\|Q8YZ41\|THF1_NOSS1	1.984e-36	33.79	Protein Thf1 OS=Nostoc sp. (strain PCC 7120 / SAG ...	[more]
sp\|B2J353\|THF1_NOSP7	6.597e-36	32.48	Protein Thf1 OS=Nostoc punctiforme (strain ATCC 29...	[more]
sp\|Q3M4B2\|THF1_TRIV2	8.525e-36	33.33	Protein Thf1 OS=Trichormus variabilis (strain ATCC...	[more]
sp\|Q5N664\|THF1_SYNP6	3.095e-35	33.48	Protein Thf1 OS=Synechococcus sp. (strain ATCC 271...	[more]

BLAST of PvulFLAVERTChr11.1000701 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11)
Total hits: 1

Position :

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Match Name	E-value	Identity	Description
\|	2.894e-135	67.38	Symbols: THF1, PSB29 \| THYLAKOID FORMATION1, photo...	[more]

InterPro

Analysis Name: Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL
Date Performed: 2024-08-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017499	Protein Thf1	NCBIFAM	TIGR03060	PS_II_psb29	coord: 62..267 e-value: 9.9E-42 score: 154.6
IPR017499	Protein Thf1	PFAM	PF11264	ThylakoidFormat	coord: 66..271 e-value: 3.0E-71 score: 251.1
IPR017499	Protein Thf1	PANTHER	PTHR34793	PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC	coord: 1..284
IPR017499	Protein Thf1	HAMAP	MF_01843	Thf1	coord: 61..269 score: 21.552982

Analysis Name: InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0
Date Performed: 2024-08-19

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017499	Protein Thf1	NCBIFAM	TIGR03060	PS_II_psb29	coord: 62..267 e-value: 9.9E-42 score: 154.6
IPR017499	Protein Thf1	PFAM	PF11264	ThylakoidFormat	coord: 66..271 e-value: 3.0E-71 score: 251.1
IPR017499	Protein Thf1	PANTHER	PTHR34793	PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC	coord: 1..284
IPR017499	Protein Thf1	HAMAP	MF_01843	Thf1	coord: 61..269 score: 21.552982

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr11:14699935..14704282-
coding sequence from alignment at Chr11:14699935..14704282-

mRNA sequence

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701; Name=PvulFLAVERTChr11.1000701; organism=Phaseolus vulgaris; type=mRNA; length=1448bp
GCTTTTTGATTATTTTACAAAGAAATTACATGTTTCCACGTGTCATTATA
CCATTGTCTCCTTGGATAAGCTTGTCTTTGCTGCAATTCACAAAAGCCTC
ACTTTCCCCAACCCAAAGAAGCAAAGCAATGCCTCTCTGTCTGTGAATAT
TTTCACTGCTATGCCGCAAAACTTCTGATCCCGGCCACcacacactctct
ctctctttctctccgATGGCCACTGTTACTTCTTCTTTCCATTTCTCCAC
TCTCATCCAATCTTCTCAGAGGAACCTCACCCTCTCTTCCAATTCACCAA
CCTTAAGCTTCCGCGTTGGTTTCTCATGCCACTATCTTGGAGTTCGAGCT
TCCAGTTATGCTTCCAAAATGGTTGTTCGCTGCTCCTCTTCCTCTGTCAC
AGACCCTCCAACTGTTTCTGAGACAAAGTTAAATTTTCTCAAGGAATATA
AGCGACCAATTCCTAGTATCTACAACACGGTGCTGCAAGAGCTTATTGTT
CAGCAACATCTAATGAGATACAAGAGATCATATCGCTATGATGCTGTATT
TGCCCTTGGCTTTGTCACTGTATACGAGCAACTCATGGAAGGGTATCCAA
GTGATGAGGACCGAGATGCCATCTTCCAAGCATACATTAAGGCATTGAAA
GAAGATCCTGAACAATACAGAGTAGATGCAAAGAAATTAGAAGAATGGGC
TCGAGCACAAAACTCAACTTCACTAGTTGAGTTCTCATCCAGAGAAGGAG
AAGTTGAGGGAATATTAAAGGATATTGCAGAAAGAGCAGGAGGAAAGGGG
GATTTCAGTTACAGTCGTTTCTTTGCAATAGGCCTCTTTCGCCTTCTTGA
GTTAGCAAATGCTATGGAACCAACAATTTTGGAAAAGCTTTGTGCGGTGT
TGAATGTCAACAAAAGGAGTGTGGATCGGGACTTGGATGTGTATCGTAAC
TTGCTTTCTAAGTTGGTTCAAGCTAAAGAGTTGCTAAAGGAATATGTTGA
CAGggagaaaaagaaaatagaagaaaGGGCTGGACCACAAAAGACTAATG
AGGCCATTACACAACAGCAATTTTCTAGCCTTTAGTTATGGGGTTTCCTC
TGTAATGATAACCTTGTAAGAGTTGGTATTCTTGACTTGCTCTTTTTTTT
GTTGGTCATGTACATTGGGTGAATCAGAATGGGGCACTTCTATCATCATG
GTTTTGCATACTGTACTTGATGTATCTTCTTCCATGGTGATCCAGCTAAA
TCCTGCTTTCTGCTCAACCACAATTTACCTTTCCAACAGTCTTGTGTAAT
CTTCTCTCctacatgtattttttttccacAAGTTCGCAGATCTATTGTAG
TTCAAATACACGCGGGAAAGCATATGTGGTAATTGAAATTGGAATTCTTC
ATATTTCAGaatctaacattttttggagTGAATGTCTGGTTTACATCT

protein sequence of drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701; Name=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701; organism=Phaseolus vulgaris; type=polypeptide; length=289bp
MATVTSSFHFSTLIQSSQRNLTLSSNSPTLSFRVGFSCHYLGVRASSYAS
KMVVRCSSSSVTDPPTVSETKLNFLKEYKRPIPSIYNTVLQELIVQQHLM
RYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFQAYIKALKEDPEQ
YRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYS
RFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKL
VQAKELLKEYVDREKKKIEERAGPQKTNEAITQQQFSSL

mRNA from alignment at Chr11:14699935..14704282-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701; Name=PvulFLAVERTChr11.1000701; organism=Phaseolus vulgaris; type=mRNA; length=4348bp; location=Sequence derived from: Chr11:14699935..14704282- (Phaseolus vulgaris
GCTTTTTGATTATTTTACAAAGAAATTACATGTTTCCACGTGTCATTATA
CCATTGTCTCCTTGGATAAGCTTGTCTTTGCTGCAATTCACAAAAGCCTC
ACTTTCCCCAACCCAAAGAAGCAAAGCAATGCCTCTCTGTCTGTGAATAT
TTTCACTGCTATGCCGCAAAACTTCTGATCCCGGCCACCACACACTCTCT
CTCTCTTTCTCTCCGATGGCCACTGTTACTTCTTCTTTCCATTTCTCCAC
TCTCATCCAATCTTCTCAGAGGAACCTCACCCTCTCTTCCAATTCACCAA
CCTTAAGCTTCCGCGTTGGTTTCTCATGCCACTATCTTGGAGTTCGAGCT
TCCAGTTATGCTTCCAAAATGGTTGTTCGCTGCTCCTCTTCCTCTGTCAC
AGGTTTGTTTTGTTCCCCACTAAGTGAGGCAAAAAGGGTACAATATGAGT
TTTGAGCTCCTTTTGGTTCTCCGAGAATTGGGTTGTTTTCAATTTTTGTT
TTTTAAGGTTTGGAGTTGAAAATGATGTTTTAATTGCAGGTGTATGGTTG
TCAATTTTTAAGTCTGTTTTTTAAATTTGGTTTTGCAACCGGATTTTTAA
GGAGGAATTTGTCTTTTGAGGATAATGTTGCAATTGAAACTGTGGTTGAT
GAGGTTTGAACATAGTTTTAGAGTTCTTTTGTAACAAGTGGATGAAATTC
CTTGTGGCTCTTTGTACAATTGACTGGGAAATTTTCTGGATTAATGCCAC
CGTGTTGTGTTTGTGATGATTTTTTGTGTGTGAACGTCAAACTGAAATTC
TTTGCAGCTCTTTCTTGCAGAGATGAGTATAGTTTCGATTTTCAATGTTA
TCAGAAAGTGATTTGGTTTTTATTATGAAGATGTTACTTAGAATCATGTT
AGTGACCATGTGATGTAGTGTCAAATGGTTCCAAATTAGGTTCCTTTGTC
GTTCTAATATTCATAGTGCTACATGGGAAAAAGTAATAAAATATGAAATG
GAATATTGTTATCACAGTTGGTTGGTTATGGGTTGTTTACTTTACACACT
TGATCTGCAGACCCTCCAACTGTTTCTGAGACAAAGTTAAATTTTCTCAA
GGAATATAAGCGACCAATTCCTAGTATCTACAACACGGTGCTGCAAGAGC
TTATTGTTCAGCAACATCTAATGAGATACAAGAGATCATATCGCTATGAT
GCTGTATTTGCCCTTGGCTTTGTCACTGTATACGAGCAACTCATGGAAGG
GTATCCAAGTGATGAGGACCGAGATGCCATCTTCCAAGCATACATTAAGG
CATTGAAAGAAGATCCTGAACAATACAGGTTAAAATATTGAATAATTTGG
ACTTTTCTACCCCGTCCCCCACTTCCATTTCTGTGATTCCTATTCCAAAC
CATCGACTTACTGATAAAGAATTGTGAACTAATAATGGCTATAAGCCACT
AGAAACTGTTTCACTTAAACTCACCAAAGCCCTAATGCTGTGTGCTTGGG
AGACATTTGGGTGTTTCCAAAATCATGTTAGCAGTTGCTGCAAATTGTGG
AACATGATTTTGTGATTTGTGAATCAGGTTTGGTGTGCTTTACTCCAAGC
ATGACATTAGAGTTTTAGCACCCAAAATCATGTTTTAGGCTATCGATACC
CATACTATTGTTTAAATATTATTGAAGAGAAATGTGGTACACTCAAATGA
CTCCCTGCTTGAATAATAAATTCTGATGTATTATCTGCTGTTTGCAATTT
GACTGCAATTGGAAGGTATAGTACTAACTGACAAAATATCCTCGATTATT
GCTGTGAAGTGAAAAATAGAGTTCTGAAATTTAATCTGCATGTTTAAAAG
TAGAAGAATAAATTACTTTTCCTAAGACCTGTTGAAGGAAAAAAATTAGC
TGAAATACAAGGACCATTGTCTGTGCTCTGTAAAAAATTGTTATATCAAC
TGGATAGACTGCAATTTCGTTGAATTCTTATTGTAAGTAATTATTTTCTA
CATTTCCCTCTACAGAGTAGATGCAAAGAAATTAGAAGAATGGGCTCGAG
CACAAAACTCAACTTCACTAGTTGAGTTCTCATCCAGAGAAGGAGAAGTT
GAGGGAATATTAAAGGATATTGCAGAAAGAGCAGGAGGAAAGGGGGATTT
CAGTTACAGTCGTTTCTTTGCAATAGGCCTCTTTCGCCTTCTTGAGTTAG
CAAATGCTATGGAACCAACAATTTTGGAAAAGGTTACCCAATTCATTTAA
GGCATCATGTTATTGATTTGATTTCTATATATATATATATATATATATTA
ATAATTTGAAGTTTAGATTGCCAAGTCTATTTCTCATTCATACCAGTCTA
GAAAACAAAATTCAAGACTTTCGAACTTTTTAGACATATTTGTTCTGGCC
TGTTTGGGTTAGCTGCAATAATGGTCTTGATACGGTCTCAATTCAAGTTC
AGGCCTTATTGATGGAATTATTCCCATGATTTTCTTTAATCTACATAAAA
TATTGACTTCATTATTTTTCTTCTGCTGAAATAATTGTATGACATTTGGA
GACGAACACTCCATCTTTTGTAATAAACGTTTAGGACCTTAAGATTATTG
TTTGCAATAGAAATCAAATTCTATATCAGCAGAATAAATGTGCACACTCA
ATGATTTAAGGAGATTTGACAATGTATCTGCGTCCTCAGGATCAGAATAG
TTGTTTCTATTATTATTTAATAAGTAGGCTTGACATATATATATATATAT
ACATATATGTATGTATGTATGTATATATATAACAGTACAGGTTTACATTA
TCACCTGTGTATTTTGTCTGGCAGTAGAATTAGTCATAAACAATTATAGG
CATCAAAATCACAGATAAAACTAACAATTTGAGCATAGGAGATGATACGA
CAATGGAATAGTGGAGGATGCATTTAATACCATGATTATGAGTAAAACCA
TCTACTTTCTACCGCTTACTTACTTTCTATATAGGATTGTTTATCAATCA
ATCTCTGGTCTTAATCCAACAGCTTTGTGCGGTGTTGAATGTCAACAAAA
GGAGTGTGGATCGGGACTTGGATGTGTATCGTAACTTGCTTTCTAAGTTG
GTTCAAGCTAAAGAGTTGCTAAAGGAATATGTTGACAGGTAAAATATTAG
ATCTAGGCATCTTGCAATGTTATTTCGTGAATTTAGTGAGTTATCATCTT
GCAATGCTATTTAGTGAAAATTCCCTTCTCAAGAGTTTTCATCCCTTGAT
AGAATCTACGAATGTTGCATTTATTTAGTGATTTTTTCTCCCGTCTAAAC
CTTTTAGTCTGCAGTTGTAAATCTACTAATTCTTTAGTAGTTTAGCCCAT
CAAGCTCATGGACACATTATTCCAAACTTTGGTATTAACTTAGTAAAATT
TGAGGTGGTTAGCCCCGGCCTATTTATGAAGCTCTTTAGTTTTTAGACAG
ATTCAACATTCCATTCCAAATATCATATTTAGAAAAGGGTATGATTACAG
ACTATCTAGTTAGTGAGAAACATTCGTATCAAGGTGACTTTCAAACTTTT
TGCCGAATATATGGATAAAATATGTTTTTGTTTCTTTATAATTTTTAAAG
TTCAATTTAGTTTCTCTAAAAAGTTCTATATAACTTTTTTCTCCTAATTT
TGAAACAGAGACTAAAATCACATTTTAGCCTAAATATATTGTATTCAAGT
TATTTTACCACCGAGACCAAGCTTAGATCCCATATGCTCCATAATGCTTG
CAGTAGCCTGTGTTTGTGTTTGATACCATTATCTGCTCAGCAGTCAGCAT
TTGGATTCCTTTACCTGAACTGTTGTTCTAGTAGATGTTATATTTACCTT
GTTTCGTTTTCATCCGCAAGATCTTGATTCTTTGAAATAATCTTTTGCTT
CAGGGAGAAAAAGAAAATAGAAGAAAGGGCTGGACCACAAAAGACTAATG
AGGCCATTACACAACAGCAATTTTCTAGCCTTTAGTTATGGGGTTTCCTC
TGTAATGATAACCTTGTAAGAGTTGGTATTCTTGACTTGCTCTTTTTTTT
GTTGGTCATGTACATTGGGTGAATCAGAATGGGGCACTTCTATCATCATG
GTTTTGCATACTGTACTTGATGTATCTTCTTCCATGGTGATCCAGCTAAA
TCCTGCTTTCTGCTCAACCACAATTTACCTTTCCAACAGTCTTGTGTAAT
CTTCTCTCCTACATGTATTTTTTTTCCACAAGTTCGCAGATCTATTGTAG
TTCAAATACACGCGGGAAAGCATATGTGGTAATTGAAATTGGAATTCTTC
ATATTTCAGAATCTAACATTTTTTGGAGTGAATGTCTGGTTTACATCT

Coding sequence (CDS) from alignment at Chr11:14699935..14704282-

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000701; Name=PvulFLAVERTChr11.1000701; organism=Phaseolus vulgaris; type=CDS; length=870bp; location=Sequence derived from: Chr11:14699935..14704282- (Phaseolus vulgaris
ATGGCCACTGTTACTTCTTCTTTCCATTTCTCCACTCTCATCCAATCTTC
TCAGAGGAACCTCACCCTCTCTTCCAATTCACCAACCTTAAGCTTCCGCG
TTGGTTTCTCATGCCACTATCTTGGAGTTCGAGCTTCCAGTTATGCTTCC
AAAATGGTTGTTCGCTGCTCCTCTTCCTCTGTCACAGACCCTCCAACTGT
TTCTGAGACAAAGTTAAATTTTCTCAAGGAATATAAGCGACCAATTCCTA
GTATCTACAACACGGTGCTGCAAGAGCTTATTGTTCAGCAACATCTAATG
AGATACAAGAGATCATATCGCTATGATGCTGTATTTGCCCTTGGCTTTGT
CACTGTATACGAGCAACTCATGGAAGGGTATCCAAGTGATGAGGACCGAG
ATGCCATCTTCCAAGCATACATTAAGGCATTGAAAGAAGATCCTGAACAA
TACAGAGTAGATGCAAAGAAATTAGAAGAATGGGCTCGAGCACAAAACTC
AACTTCACTAGTTGAGTTCTCATCCAGAGAAGGAGAAGTTGAGGGAATAT
TAAAGGATATTGCAGAAAGAGCAGGAGGAAAGGGGGATTTCAGTTACAGT
CGTTTCTTTGCAATAGGCCTCTTTCGCCTTCTTGAGTTAGCAAATGCTAT
GGAACCAACAATTTTGGAAAAGCTTTGTGCGGTGTTGAATGTCAACAAAA
GGAGTGTGGATCGGGACTTGGATGTGTATCGTAACTTGCTTTCTAAGTTG
GTTCAAGCTAAAGAGTTGCTAAAGGAATATGTTGACAGGGAGAAAAAGAA
AATAGAAGAAAGGGCTGGACCACAAAAGACTAATGAGGCCATTACACAAC
AGCAATTTTCTAGCCTTTAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR017499	Thf1

Vocabulary: **Biological Process**
Term	Definition
GO:0015979	photosynthesis
GO:0010207	photosystem II assembly

Search form

PvulFLAVERTChr11.1000701