PvulFLAVERTChr11.1000717
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of PvulFLAVERTChr11.1000717 vs. ExPASy TrEMBL (2024)
Match: tr|V7AKM2|V7AKM2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G112900g PE=4 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 2.419e-53 Identity = 84/85 (98.82%), Postives = 85/85 (100.00%), Query Frame = 0 Query: 1 MMGVQATPPTVAPFRSDHWKQFDDSVNAVSFGFVATAILISMFLLLAIFERFLRQRSSEASVATPIDLEHQIDFRGKLENLSPKV 85
MMGVQATPPTVAPFRSDHWKQFDDSVNAVSFGFVATAILISMFLLLAIFERFLRQRSSEASVATPIDLEHQIDFRGKLENLSPK+
Sbjct: 1 MMGVQATPPTVAPFRSDHWKQFDDSVNAVSFGFVATAILISMFLLLAIFERFLRQRSSEASVATPIDLEHQIDFRGKLENLSPKM 85
BLAST of PvulFLAVERTChr11.1000717 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SBD0|A0A0S3SBD0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G136800 PE=4 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 2.256e-47 Identity = 76/85 (89.41%), Postives = 80/85 (94.12%), Query Frame = 0 Query: 1 MMGVQATPPTVAPFRSDHWKQFDDSVNAVSFGFVATAILISMFLLLAIFERFLRQRSSEASVATPIDLEHQIDFRGKLENLSPKV 85
MMGV+AT PTVAPFRSDHWKQFDDSVNAVSFGFVATAILISMFLLLAIFERFLR RSSEAS ATP+DLEHQI+ GKLENLSPK+
Sbjct: 1 MMGVEATAPTVAPFRSDHWKQFDDSVNAVSFGFVATAILISMFLLLAIFERFLRHRSSEASAATPVDLEHQINLVGKLENLSPKM 85
BLAST of PvulFLAVERTChr11.1000717 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9V5G3|A0A0L9V5G3_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan08g110300 PE=4 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 2.256e-47 Identity = 76/85 (89.41%), Postives = 80/85 (94.12%), Query Frame = 0 Query: 1 MMGVQATPPTVAPFRSDHWKQFDDSVNAVSFGFVATAILISMFLLLAIFERFLRQRSSEASVATPIDLEHQIDFRGKLENLSPKV 85
MMGV+AT PTVAPFRSDHWKQFDDSVNAVSFGFVATAILISMFLLLAIFERFLR RSSEAS ATP+DLEHQI+ GKLENLSPK+
Sbjct: 1 MMGVEATAPTVAPFRSDHWKQFDDSVNAVSFGFVATAILISMFLLLAIFERFLRHRSSEASAATPVDLEHQINLVGKLENLSPKM 85
BLAST of PvulFLAVERTChr11.1000717 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3TIH0|A0A1S3TIH0_VIGRR (Uncharacterized protein LOC106755849 OS=Vigna radiata var. radiata OX=3916 GN=LOC106755849 PE=4 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.972e-46 Identity = 74/85 (87.06%), Postives = 79/85 (92.94%), Query Frame = 0 Query: 1 MMGVQATPPTVAPFRSDHWKQFDDSVNAVSFGFVATAILISMFLLLAIFERFLRQRSSEASVATPIDLEHQIDFRGKLENLSPKV 85
MMGV+AT PT+ PFRSDHWKQFDDSVNAVSFGFVATAILISMFLLLAIFERFLR RSSEAS ATP+DLEHQI+ GKLENLSPK+
Sbjct: 1 MMGVEATAPTLPPFRSDHWKQFDDSVNAVSFGFVATAILISMFLLLAIFERFLRHRSSEASAATPLDLEHQINLGGKLENLSPKM 85
BLAST of PvulFLAVERTChr11.1000717 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA87BAW7|A0AA87BAW7_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS31172 PE=4 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.876e-45 Identity = 74/85 (87.06%), Postives = 77/85 (90.59%), Query Frame = 0 Query: 1 MMGVQATPPTVAPFRSDHWKQFDDSVNAVSFGFVATAILISMFLLLAIFERFLRQRSSEASVATPIDLEHQIDFRGKLENLSPKV 85
MMGV T PT APFRSDHWK FDDSVNAVSFGFVATAILISMFLLLAIFERF RQRSSEASVA+PI+LEHQIDF GK ENLSPK+
Sbjct: 1 MMGVAVTAPTEAPFRSDHWKHFDDSVNAVSFGFVATAILISMFLLLAIFERFFRQRSSEASVASPINLEHQIDFGGKFENLSPKM 85
BLAST of PvulFLAVERTChr11.1000717 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86W5Q5|A0AA86W5Q5_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS31175 PE=4 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 2.441e-44 Identity = 73/84 (86.90%), Postives = 76/84 (90.48%), Query Frame = 0 Query: 2 MGVQATPPTVAPFRSDHWKQFDDSVNAVSFGFVATAILISMFLLLAIFERFLRQRSSEASVATPIDLEHQIDFRGKLENLSPKV 85
MGV T PT APFRSDHWK FDDSVNAVSFGFVATAILISMFLLLAIFERF RQRSSEASVA+PI+LEHQIDF GK ENLSPK+
Sbjct: 1 MGVAVTAPTEAPFRSDHWKHFDDSVNAVSFGFVATAILISMFLLLAIFERFFRQRSSEASVASPINLEHQIDFGGKFENLSPKM 84
BLAST of PvulFLAVERTChr11.1000717 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TP60|A0A151TP60_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_022484 PE=4 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.403e-43 Identity = 74/90 (82.22%), Postives = 79/90 (87.78%), Query Frame = 0 Query: 11 VAPF---RSDHWKQFDDSVNAVSFGFVATAILISMFLLLAIFERFLRQRSSEASVATPIDLEHQIDFRGKLENLSPKVHFNTPSLPLISF 97
V+PF R +HW+ FDDSVNAVSFGFVATAILISMFLLLAIFERFLRQRSSEA+VATPIDLEHQIDF GKLENLSPKVHFN P + I F
Sbjct: 2 VSPFNTQRPEHWEHFDDSVNAVSFGFVATAILISMFLLLAIFERFLRQRSSEANVATPIDLEHQIDFGGKLENLSPKVHFNLPFVDFIYF 91
BLAST of PvulFLAVERTChr11.1000717 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6LGV5|A0A4D6LGV5_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG3g2357 PE=4 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 3.680e-43 Identity = 74/84 (88.10%), Postives = 77/84 (91.67%), Query Frame = 0 Query: 2 MGVQATPPTVAPFRSDHWKQFDDSVNAVSFGFVATAILISMFLLLAIFERFLRQRSSEASVATPIDLEHQIDFRGKLENLSPKV 85
MGV+AT PTVAPFRSDHWKQFDDSVNAV+FGFVATAILISMFLLLAIFERFLRQRS S ATPIDLEHQID GKLENLSPK+
Sbjct: 1 MGVEATAPTVAPFRSDHWKQFDDSVNAVAFGFVATAILISMFLLLAIFERFLRQRS---SAATPIDLEHQIDRGGKLENLSPKM 81
BLAST of PvulFLAVERTChr11.1000717 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371GHZ2|A0A371GHZ2_MUCPR (CRIB domain-containing protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_27982 PE=4 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.394e-42 Identity = 72/85 (84.71%), Postives = 77/85 (90.59%), Query Frame = 0 Query: 1 MMGVQATPPTVAPFRSDHWKQFDDSVNAVSFGFVATAILISMFLLLAIFERFLRQRSSEASVATPIDLEHQIDFRGKLENLSPKV 85
MMGV+AT PTVAP + HWK FDDSVNAVSFGFVATAILISMFLLLAIFERFLRQRSSEA+VATPIDLEHQ+ F GK ENLSPK+
Sbjct: 15 MMGVEATTPTVAPLNT-HWKHFDDSVNAVSFGFVATAILISMFLLLAIFERFLRQRSSEATVATPIDLEHQMHFGGKFENLSPKM 98
BLAST of PvulFLAVERTChr11.1000717 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445KFT1|A0A445KFT1_GLYSO (CRIB domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_016175 PE=4 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.363e-38 Identity = 71/91 (78.02%), Postives = 76/91 (83.52%), Query Frame = 0 Query: 1 MMGVQATPPTVAPF-----RSDHWKQFDDSVNAVSFGFVATAILISMFLLLAIFERFLRQRSSEA-SVATPIDLEHQIDFRGKLENLSPKV 85
MMG +AT P VAPF R DHWK FDDSVNAVSFGFVATAILISMFLLLAIFERFLRQRSSEA +VATP+DLEHQ+ GKLENLS K+
Sbjct: 1 MMGFEATTPMVAPFGSNTQRPDHWKHFDDSVNAVSFGFVATAILISMFLLLAIFERFLRQRSSEANNVATPMDLEHQMHLGGKLENLSSKM 91
BLAST of PvulFLAVERTChr11.1000717 vs. Araport11
Match: | (Symbols: DEG23 | | chr1:3715229-3717320 FORWARD LENGTH=161) HSP 1 Score: 70.8626 bits (172), Expect = 1.657e-16 Identity = 37/51 (72.55%), Postives = 41/51 (80.39%), Query Frame = 0 Query: 8 PPTVAPF---RSDHWK-QFDDSVNAVSFGFVATAILISMFLLLAIFERFLR 54
PP AP R + WK QFDDSVNAVSFGFVATAILISMFL++AIFER +R
Sbjct: 16 PPIGAPMNLRREEPWKSQFDDSVNAVSFGFVATAILISMFLVMAIFERLIR 66
BLAST of PvulFLAVERTChr11.1000717 vs. Araport11
Match: | (Symbols: DEG23 | | chr1:3715229-3717320 FORWARD LENGTH=187) HSP 1 Score: 70.0922 bits (170), Expect = 4.086e-16 Identity = 37/51 (72.55%), Postives = 41/51 (80.39%), Query Frame = 0 Query: 8 PPTVAPF---RSDHWK-QFDDSVNAVSFGFVATAILISMFLLLAIFERFLR 54
PP AP R + WK QFDDSVNAVSFGFVATAILISMFL++AIFER +R
Sbjct: 16 PPIGAPMNLRREEPWKSQFDDSVNAVSFGFVATAILISMFLVMAIFERLIR 66
BLAST of PvulFLAVERTChr11.1000717 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:3187817-3188580 FORWARD LENGTH=128) HSP 1 Score: 53.1434 bits (126), Expect = 5.251e-10 Identity = 32/66 (48.48%), Postives = 39/66 (59.09%), Query Frame = 0 Query: 12 APFRSDHWKQFDDSVNAVSFGFVATAILISMFLLLAIFERFLRQRSSEASVATPIDLEHQIDFRGK 77
P+RS S+NA+SFGFVATAILISMFL++AIFE R +S D HQI R +
Sbjct: 19 GPWRSS------TSMNAISFGFVATAILISMFLIMAIFEHLFRPENSS------FDSPHQIRQRQR 72
BLAST of PvulFLAVERTChr11.1000717 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:13981635-13982575 FORWARD LENGTH=143) HSP 1 Score: 51.2174 bits (121), Expect = 4.337e-9 Identity = 25/46 (54.35%), Postives = 32/46 (69.57%), Query Frame = 0 Query: 10 TVAPFRSDHWKQ--FDDSVNAVSFGFVATAILISMFLLLAIFERFL 53
T P +D Q F+ SVNAV FG VAT +LI++FLL+A FERF+
Sbjct: 43 TAGPLAADEEGQGRFESSVNAVPFGLVATGVLIAIFLLIAFFERFM 88
BLAST of PvulFLAVERTChr11.1000717 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:21446350-21447059 REVERSE LENGTH=53) HSP 1 Score: 44.669 bits (104), Expect = 2.002e-7 Identity = 21/33 (63.64%), Postives = 26/33 (78.79%), Query Frame = 0 Query: 24 DSVNAVSFGFVATAILISMFLLLAIFERFLRQR 56
S+NA+SFGFVATAILI MF+++AI E R R
Sbjct: 21 SSMNAISFGFVATAILILMFIIMAILEHLFRFR 53 The following BLAST results are available for this feature:
BLAST of PvulFLAVERTChr11.1000717 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of PvulFLAVERTChr11.1000717 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of PvulFLAVERTChr11.1000717 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11) Total hits: 5 Position : 0 Zoom : x 1
InterPro
Analysis Name: Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL
Date Performed: 2024-08-19
Analysis Name: InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0 Date Performed: 2024-08-19 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000717 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000717; Name=PvulFLAVERTChr11.1000717; organism=Phaseolus vulgaris; type=mRNA; length=588bpback to top protein sequence of drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000717 >drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000717 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000717; Name=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000717; organism=Phaseolus vulgaris; type=polypeptide; length=106bpback to top mRNA from alignment at Chr11:15285407..15285994- Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000717 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000717; Name=PvulFLAVERTChr11.1000717; organism=Phaseolus vulgaris; type=mRNA; length=588bp; location=Sequence derived from: Chr11:15285407..15285994- (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr11:15285407..15285994- >drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000717 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000717; Name=PvulFLAVERTChr11.1000717; organism=Phaseolus vulgaris; type=CDS; length=321bp; location=Sequence derived from: Chr11:15285407..15285994- (Phaseolus vulgarisback to top |