Ca_00749, Ca_00749_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_00749
Unique NameCa_00749_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length495
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca3chromosomeCa3:34735670..34737407 +Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR198Pisum sativum Cameor genome v1aPisum sativum
capsR206Pisum sativum Cameor genome v1aPisum sativum
capsR231Pisum sativum Cameor genome v1aPisum sativum
cavuR164Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR213Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR193Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR233Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR248Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0279Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0296Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0335Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0345Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0587Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0892Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1044Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1194Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL115Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL365Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL635Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR173Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR199Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR203Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR187Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR201Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR185Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
catifR222Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR200Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR223Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR190Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR193Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR211Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR242Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR204Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR247Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR271Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR155Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR198Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR073Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR081Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR085Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL066Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL339Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL440Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL632Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR174Cicer arietinum
cacarR184Cicer arietinum
cacarR203Cicer arietinum
cacarR219Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
jg1214.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_02599Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.001G184700.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-TanjilR_03191Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Psat03G0147300-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun07g065000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Va03G074030.4Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun01g167800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.3g045080.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
evm.model.Chr07.2167Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Hedin2.R1.5g144400.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Phvul.007G224900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
jg31887.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.5g116400.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-XM_014639697.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat3g036920.1Pisum sativum Cameor genome v1aPisum sativum
rna-KK1_010196Cajanus cajan Asha genome v1.0Cajanus cajan
Vfaba.Tiffany.R1.3g036560.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-XM_014656700.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat06G0211400-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-NM_001279089.1Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_00749-CDS1Ca_00749-CDS1Cicer arietinumCDS
Ca_00749-CDS2Ca_00749-CDS2Cicer arietinumCDS
Ca_00749-CDS3Ca_00749-CDS3Cicer arietinumCDS
Ca_00749-CDS4Ca_00749-CDS4Cicer arietinumCDS
Ca_00749-CDS5Ca_00749-CDS5Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_00749_v1.0_kabuliCa_00749_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_00749 vs. SwissProt
Match: RL24_CICAR (60S ribosomal protein L24 OS=Cicer arietinum GN=RPL24 PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 4.499e-61
Identity = 121/147 (82.31%), Postives = 121/147 (82.31%), Query Frame = 1 
Query:    1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALRXXXXXXXXXXXXXXXXXXXXXXXXXXSQGKGNVQ 441
            MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR                          SQGKGNVQ
Sbjct:    1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVASKAQKSQGKGNVQ 147
[Close]
BLAST of Ca_00749 vs. SwissProt
Match: RL24_PRUAV (60S ribosomal protein L24 OS=Prunus avium GN=RPL24 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 4.358e-56
Identity = 106/113 (93.81%), Postives = 109/113 (96.46%), Query Frame = 1 
Query:    1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 339
            MVLKTELCRFSGAKIYPG+GIRFIR DSQVFLF NSKCKRYFHNRLKPSKLTWTAM+RKQHKKD AQEAVKKRRR TKKPYSRSIVGATLEVIQK+RTEKPEVRDAAREAALR
Sbjct:    1 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALR 113
[Close]
BLAST of Ca_00749 vs. SwissProt
Match: RL242_ARATH (60S ribosomal protein L24-2 OS=Arabidopsis thaliana GN=RPL24B PE=2 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 1.656e-55
Identity = 105/113 (92.92%), Postives = 109/113 (96.46%), Query Frame = 1 
Query:    1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 339
            MVLKTELCRFSG KIYPGRGIRFIR DSQVFLF+NSKCKRYFHN+LKPSKL WTAM+RKQHKKDAAQEAVK+RRRATKKPYSRSIVGATLEVIQKKR EKPEVRDAAREAALR
Sbjct:    1 MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLAWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113
[Close]
BLAST of Ca_00749 vs. SwissProt
Match: RL241_ARATH (60S ribosomal protein L24-1 OS=Arabidopsis thaliana GN=RPL24A PE=1 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 2.163e-55
Identity = 105/113 (92.92%), Postives = 109/113 (96.46%), Query Frame = 1 
Query:    1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 339
            MVLKTELCRFSG KIYPGRGIRFIR DSQVFLF+NSKCKRYFHN+LKPSKL WTAM+RKQHKKDAAQEAVK+RRRATKKPYSRSIVGATLEVIQKKR EKPEVRDAAREAALR
Sbjct:    1 MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113
[Close]
BLAST of Ca_00749 vs. SwissProt
Match: RL24_HORVU (60S ribosomal protein L24 OS=Hordeum vulgare GN=RPL24 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 2.238e-52
Identity = 100/113 (88.50%), Postives = 103/113 (91.15%), Query Frame = 1 
Query:    1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 339
            MVLKTELCRFSG KIYPG+GIRFIR DSQVFLF NSKCKRYFHNRLKP+KL WTAM+RKQHKKD   EA KKRRR TKKPYSRSIVGATLEVIQKKR EKPEVRDAAREAALR
Sbjct:    1 MVLKTELCRFSGQKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPAKLCWTAMYRKQHKKDIHAEAAKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113
[Close]
BLAST of Ca_00749 vs. SwissProt
Match: RL24B_SCHPO (60S ribosomal protein L24-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpl24b PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.908e-27
Identity = 58/111 (52.25%), Postives = 80/111 (72.07%), Query Frame = 1 
Query:    7 LKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 339
            +K E+C FSG+K+YPG G  F+RGD++VF FVN K +  F  R  P +L+WT ++R+ HKK  ++E  KKR R T K + R IVGA L+VI++KR ++PEVR AAR AAL+
Sbjct:    1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHKKGISEEHAKKRTRRTVK-HQRGIVGANLDVIKEKRNQRPEVRAAARAAALK 110
[Close]
BLAST of Ca_00749 vs. SwissProt
Match: RL24A_SCHPO (60S ribosomal protein L24-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpl24a PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.908e-27
Identity = 58/111 (52.25%), Postives = 80/111 (72.07%), Query Frame = 1 
Query:    7 LKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 339
            +K E+C FSG+K+YPG G  F+RGD++VF FVN K +  F  R  P +L+WT ++R+ HKK  ++E  KKR R T K + R IVGA L+VI++KR ++PEVR AAR AAL+
Sbjct:    1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHKKGISEEHAKKRTRRTVK-HQRGIVGANLDVIKEKRNQRPEVRAAARAAALK 110
[Close]
BLAST of Ca_00749 vs. SwissProt
Match: RL24_DEBHA (60S ribosomal protein L24 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=RPL24 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 8.016e-26
Identity = 55/110 (50.00%), Postives = 79/110 (71.82%), Query Frame = 1 
Query:    7 LKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAAL 336
            +K EL  FSG KIYPGRG  F+RGDS++F F +SK    FH R  P +++WT ++R+QHKK  ++E+ K+R R T K   R+IVGA+LE+I+++R++KP  R AAR+  L
Sbjct:    1 MKVELDSFSGTKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRISWTVLYRRQHKKGISEESAKRRTRKTVK-NQRAIVGASLELIKERRSQKPSDRKAARDVKL 109
[Close]
BLAST of Ca_00749 vs. SwissProt
Match: RL24A_YEAST (60S ribosomal protein L24-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPL24A PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.332e-25
Identity = 57/111 (51.35%), Postives = 74/111 (66.67%), Query Frame = 1 
Query:    7 LKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 339
            +K E+  FSGAKIYPGRG  F+RGDS++F F NSK    F  R  P ++ WT +FRK HKK   +E  KKR R T K   R I GA+L++I+++R+ KPEVR A RE  L+
Sbjct:    1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHKKGITEEVAKKRSRKTVKA-QRPITGASLDLIKERRSLKPEVRKANREEKLK 110
[Close]
BLAST of Ca_00749 vs. SwissProt
Match: RL24_ASHGO (60S ribosomal protein L24 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPL24 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.046e-25
Identity = 54/107 (50.47%), Postives = 75/107 (70.09%), Query Frame = 1 
Query:    7 LKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAARE 327
            +K E+  FSGAKIYPGRG  F+RGDS+VF F +SK    FH R  P ++ WT ++R+ HKK   +E  KKR R T K   R++VGA+LE+I+++R+ KPE+R A R+
Sbjct:    1 MKVEIDSFSGAKIYPGRGTLFVRGDSKVFRFHSSKSASLFHQRKNPRRIAWTVLYRRHHKKGITEEVAKKRSRKTVKA-QRAVVGASLELIKERRSLKPEIRKAKRD 106
[Close]
BLAST of Ca_00749 vs. TrEMBL
Match: I3SS30_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 1.248e-56
Identity = 116/146 (79.45%), Postives = 117/146 (80.14%), Query Frame = 1 
Query:    1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALRXXXXXXXXXXXXXXXXXXXXXXXXXXSQGKGNV 438
            MVLKTELCRFSGAKIYPGRGIRFIR DSQVFLFVNSKCK YFHNRLKPSKLTWTAM+RKQHKKD AQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR                          SQGKGNV
Sbjct:    1 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKHYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAETTAKSQKSQGKGNV 146
[Close]
BLAST of Ca_00749 vs. TrEMBL
Match: I3SKQ8_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 1.057e-55
Identity = 109/113 (96.46%), Postives = 111/113 (98.23%), Query Frame = 1 
Query:    1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 339
            MVLKTELCRFSGAKIYPGRGIRFIR DSQVFLFVNSKCKRYFHN+LKPSKLTWTAM+RKQHKKD AQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR
Sbjct:    1 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNKLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 113
[Close]
BLAST of Ca_00749 vs. TrEMBL
Match: I1LZF9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 1.057e-55
Identity = 112/146 (76.71%), Postives = 117/146 (80.14%), Query Frame = 1 
Query:    1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALRXXXXXXXXXXXXXXXXXXXXXXXXXXSQGKGNV 438
            MVLKTELCRFSGAKIYPG+GIRF+RGDSQVFLF NSKCKRYFHNRLKPSKLTWTAM+RKQHKKD AQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREA LR                          SQGKG++
Sbjct:    1 MVLKTELCRFSGAKIYPGKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAQLREIKERIKKTKDDKKAKKAEVAAKSQKSQGKGSI 146
[Close]
BLAST of Ca_00749 vs. TrEMBL
Match: C6SXT2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 1.057e-55
Identity = 112/146 (76.71%), Postives = 117/146 (80.14%), Query Frame = 1 
Query:    1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALRXXXXXXXXXXXXXXXXXXXXXXXXXXSQGKGNV 438
            MVLKTELCRFSGAKIYPG+GIRF+RGDSQVFLF NSKCKRYFHNRLKPSKLTWTAM+RKQHKKD AQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREA LR                          SQGKG++
Sbjct:    1 MVLKTELCRFSGAKIYPGKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAQLREIKERIKKTMDDKKAKKAEVAAKSQKSQGKGSI 146
[Close]
BLAST of Ca_00749 vs. TrEMBL
Match: Q1SN35_MEDTR (60S ribosomal protein L24 OS=Medicago truncatula GN=MTR_1g061670 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 1.380e-55
Identity = 114/146 (78.08%), Postives = 117/146 (80.14%), Query Frame = 1 
Query:    1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALRXXXXXXXXXXXXXXXXXXXXXXXXXXSQGKGNV 438
            MVLKTELCRFSGAKIYPGRGIRFIR DSQVFLFVNSKCKRYFHN+LKPSKLTWTAM+RKQHKKD AQEAVKKRRRATKKPYSRSIVGATLEVIQKKR+EKPEVRDAAREAALR                          S GKGNV
Sbjct:    1 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNKLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREIKERVKKTKDEKKAKKAESQAKAQKSVGKGNV 146
[Close]
BLAST of Ca_00749 vs. TrEMBL
Match: B7FGN9_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 3.074e-55
Identity = 108/113 (95.58%), Postives = 110/113 (97.35%), Query Frame = 1 
Query:    1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 339
            MVLKTELCRFSGAKIYPGRGIRFIR DSQVFLFVNSKCKRYFHN+LKPSKLTWTAM+RKQHKKD AQEAVKKRRRATKKPYSRSIVG TLEVIQKKRTEKPEVRDAAREAALR
Sbjct:    1 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNKLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGTTLEVIQKKRTEKPEVRDAAREAALR 113
[Close]
BLAST of Ca_00749 vs. TrEMBL
Match: B7FN60_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 5.243e-55
Identity = 108/113 (95.58%), Postives = 110/113 (97.35%), Query Frame = 1 
Query:    1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 339
            MVLKTELCRFSGAKIYPGRGIRFIR DSQVFLFVNSKCKRYFHN+LKPSKL WTAM+RKQHKKD AQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR
Sbjct:    1 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNKLKPSKLIWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 113
[Close]
BLAST of Ca_00749 vs. TrEMBL
Match: F4YFF6_CAMSI (60S ribosomal protein L24 (Fragment) OS=Camellia sinensis PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 8.944e-55
Identity = 107/113 (94.69%), Postives = 110/113 (97.35%), Query Frame = 1 
Query:    1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 339
            MVLKTELCRFSGAKIYPG+GIRFIR DSQVFLF NSKCKRYFHNRLKPSKLTWTAM+RKQHKKDAAQEAVKKRRR TKKPYSRSIVGATLEVIQK+RTEKPEVRDAAREAALR
Sbjct:    1 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFSNSKCKRYFHNRLKPSKLTWTAMYRKQHKKDAAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALR 113
[Close]
BLAST of Ca_00749 vs. TrEMBL
Match: I1JPV1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 1.168e-54
Identity = 106/113 (93.81%), Postives = 109/113 (96.46%), Query Frame = 1 
Query:    1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 339
            MVLKTELCRFSGAKIYPG+GIRF+RGDSQVFLF NSKCKRYFHNRLKPSKLTWTAM+RKQHKKD AQEAVKKRRRA KKPYSRSIVGATLEVIQKKR EKPEVRDAAREAALR
Sbjct:    1 MVLKTELCRFSGAKIYPGKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRAAKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113
[Close]
BLAST of Ca_00749 vs. TrEMBL
Match: D7TIZ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g04210 PE=4 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 1.168e-54
Identity = 111/146 (76.03%), Postives = 116/146 (79.45%), Query Frame = 1 
Query:    1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALRXXXXXXXXXXXXXXXXXXXXXXXXXXSQGKGNV 438
            MVLKTELCRFSGAKIYPG+GIRF+R DSQVFLF NSKCKRYFHNRLKPSKLTWTAM+RKQHKKD AQEAVKKRRRATKKPYSRSIVGATLEVIQK+RTEK EVRDAAREAALR                          +QGKGNV
Sbjct:    1 MVLKTELCRFSGAKIYPGKGIRFVRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKRRTEKAEVRDAAREAALREIKERIKKTKDEKKAKKAEVMAKVQKTQGKGNV 146
[Close]
BLAST of Ca_00749 vs. DB:Swiss
Match: RL24_CICAR (60S ribosomal protein L24 OS=Cicer arietinum OX=3827 GN=RPL24 PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 2.725e-81
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1 
Query:    1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALRXXXXXXXXXXXXXXXXXXXXXXXXXXSQGKGNVQ 441
            MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVASKAQKSQGKGNVQ
Sbjct:    1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVASKAQKSQGKGNVQ 147
[Close]
BLAST of Ca_00749 vs. DB:Swiss
Match: RL241_ARATH (60S ribosomal protein L24-1 OS=Arabidopsis thaliana OX=3702 GN=RPL24A PE=1 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 6.252e-74
Identity = 133/146 (91.10%), Postives = 138/146 (94.52%), Query Frame = 1 
Query:    1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALRXXXXXXXXXXXXXXXXXXXXXXXXXXSQGKGNV 438
            MVLKTELCRFSG KIYPGRGIRFIR DSQVFLF+NSKCKRYFHN+LKPSKL WTAM+RKQHKKDAAQEAVK+RRRATKKPYSRSIVGATLEVIQKKR EKPEVRDAAREAALREIKERIKKTKDEKKAKK E ASK QKSQ KGN+
Sbjct:    1 MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEKKAKKVEYASKQQKSQVKGNI 146
[Close]
BLAST of Ca_00749 vs. DB:Swiss
Match: RL242_ARATH (60S ribosomal protein L24-2 OS=Arabidopsis thaliana OX=3702 GN=RPL24B PE=1 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 1.437e-73
Identity = 105/113 (92.92%), Postives = 109/113 (96.46%), Query Frame = 1 
Query:    1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 339
            MVLKTELCRFSG KIYPGRGIRFIR DSQVFLF+NSKCKRYFHN+LKPSKL WTAM+RKQHKKDAAQEAVK+RRRATKKPYSRSIVGATLEVIQKKR EKPEVRDAAREAALR
Sbjct:    1 MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLAWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113
[Close]
BLAST of Ca_00749 vs. DB:Swiss
Match: RL24_PRUAV (60S ribosomal protein L24 OS=Prunus avium OX=42229 GN=RPL24 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 5.542e-73
Identity = 106/113 (93.81%), Postives = 109/113 (96.46%), Query Frame = 1 
Query:    1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 339
            MVLKTELCRFSGAKIYPG+GIRFIR DSQVFLF NSKCKRYFHNRLKPSKLTWTAM+RKQHKKD AQEAVKKRRR TKKPYSRSIVGATLEVIQK+RTEKPEVRDAAREAALR
Sbjct:    1 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALR 113
[Close]
BLAST of Ca_00749 vs. DB:Swiss
Match: RL24_HORVU (60S ribosomal protein L24 OS=Hordeum vulgare OX=4513 GN=RPL24 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 7.417e-69
Identity = 100/113 (88.50%), Postives = 103/113 (91.15%), Query Frame = 1 
Query:    1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 339
            MVLKTELCRFSG KIYPG+GIRFIR DSQVFLF NSKCKRYFHNRLKP+KL WTAM+RKQHKKD   EA KKRRR TKKPYSRSIVGATLEVIQKKR EKPEVRDAAREAALR
Sbjct:    1 MVLKTELCRFSGQKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPAKLCWTAMYRKQHKKDIHAEAAKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113
[Close]
BLAST of Ca_00749 vs. DB:Swiss
Match: RL24_DEBHA (60S ribosomal protein L24 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=RPL24 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.228e-32
Identity = 54/107 (50.47%), Postives = 78/107 (72.90%), Query Frame = 1 
Query:    7 LKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAARE 327
            +K EL  FSG KIYPGRG  F+RGDS++F F +SK    FH R  P +++WT ++R+QHKK  ++E+ K+R R T K   R+IVGA+LE+I+++R++KP  R AAR+
Sbjct:    1 MKVELDSFSGTKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRISWTVLYRRQHKKGISEESAKRRTRKTVKN-QRAIVGASLELIKERRSQKPSDRKAARD 106
[Close]
BLAST of Ca_00749 vs. DB:Swiss
Match: RL24B_YEAST (60S ribosomal protein L24-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL24B PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.930e-31
Identity = 57/111 (51.35%), Postives = 74/111 (66.67%), Query Frame = 1 
Query:    7 LKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 339
            +K E+  FSGAKIYPGRG  F+RGDS++F F NSK    F  R  P ++ WT +FRK HKK   +E  KKR R T K   R I GA+L++I+++R+ KPEVR A RE  L+
Sbjct:    1 MKVEVDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHKKGITEEVAKKRSRKTVKA-QRPITGASLDLIKERRSLKPEVRKANREEKLK 110
[Close]
BLAST of Ca_00749 vs. DB:Swiss
Match: RL24_ASHGO (60S ribosomal protein L24 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=RPL24 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 4.034e-31
Identity = 54/106 (50.94%), Postives = 74/106 (69.81%), Query Frame = 1 
Query:    7 LKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAR 324
            +K E+  FSGAKIYPGRG  F+RGDS+VF F +SK    FH R  P ++ WT ++R+ HKK   +E  KKR R T K   R++VGA+LE+I+++R+ KPE+R A R
Sbjct:    1 MKVEIDSFSGAKIYPGRGTLFVRGDSKVFRFHSSKSASLFHQRKNPRRIAWTVLYRRHHKKGITEEVAKKRSRKTVKA-QRAVVGASLELIKERRSLKPEIRKAKR 105
[Close]
BLAST of Ca_00749 vs. DB:Swiss
Match: RL24_CANGA (60S ribosomal protein L24 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=RPL24 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.813e-31
Identity = 55/106 (51.89%), Postives = 73/106 (68.87%), Query Frame = 1 
Query:    7 LKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAR 324
            +K E+  FSGAKIYPGRG  F+RGDS++F F NSK    F  R  P ++ WT ++R+ HKK   +E  KKR R T K   R+IVGA+LE+I+++R+ KPEVR A R
Sbjct:    1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRVAWTVLYRRHHKKGITEEVAKKRSRKTVKA-QRAIVGASLELIKERRSLKPEVRKAKR 105
[Close]
BLAST of Ca_00749 vs. DB:Swiss
Match: RL24_GILMI (60S ribosomal protein L24 OS=Gillichthys mirabilis OX=8222 GN=rpl24 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 1.601e-30
Identity = 56/112 (50.00%), Postives = 76/112 (67.86%), Query Frame = 1 
Query:    7 LKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKR-RRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 339
            +K ELC FSG KIYPG G R+ R D +VF F+N+KC+  F  +  P ++ WT ++R++HKK  ++E  KKR RRA K  + R+I GA+L  I  KR +KPEVR A RE A+R
Sbjct:    1 MKVELCSFSGYKIYPGHGRRYARIDGKVFQFLNAKCESAFLAKRNPRQINWTVLYRRKHKKGQSEEVTKKRTRRAVK--FQRAITGASLAEIMAKRNQKPEVRKAQREQAIR 110
The following BLAST results are available for this feature:
BLAST of Ca_00749 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
RL24_CICAR4.499e-6182.3160S ribosomal protein L24 OS=Cicer arietinum GN=RP... [more]
RL24_PRUAV4.358e-5693.8160S ribosomal protein L24 OS=Prunus avium GN=RPL24... [more]
RL242_ARATH1.656e-5592.9260S ribosomal protein L24-2 OS=Arabidopsis thalian... [more]
RL241_ARATH2.163e-5592.9260S ribosomal protein L24-1 OS=Arabidopsis thalian... [more]
RL24_HORVU2.238e-5288.5060S ribosomal protein L24 OS=Hordeum vulgare GN=RP... [more]
RL24B_SCHPO1.908e-2752.2560S ribosomal protein L24-B OS=Schizosaccharomyces... [more]
RL24A_SCHPO1.908e-2752.2560S ribosomal protein L24-A OS=Schizosaccharomyces... [more]
RL24_DEBHA8.016e-2650.0060S ribosomal protein L24 OS=Debaryomyces hansenii... [more]
RL24A_YEAST2.332e-2551.3560S ribosomal protein L24-A OS=Saccharomyces cerev... [more]
RL24_ASHGO3.046e-2550.4760S ribosomal protein L24 OS=Ashbya gossypii (stra... [more]

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BLAST of Ca_00749 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
I3SS30_LOTJA1.248e-5679.45Uncharacterized protein OS=Lotus japonicus PE=2 SV... [more]
I3SKQ8_MEDTR1.057e-5596.46Uncharacterized protein OS=Medicago truncatula PE=... [more]
I1LZF9_SOYBN1.057e-5576.71Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
C6SXT2_SOYBN1.057e-5576.71Putative uncharacterized protein OS=Glycine max PE... [more]
Q1SN35_MEDTR1.380e-5578.0860S ribosomal protein L24 OS=Medicago truncatula G... [more]
B7FGN9_MEDTR3.074e-5595.58Uncharacterized protein OS=Medicago truncatula PE=... [more]
B7FN60_MEDTR5.243e-5595.58Putative uncharacterized protein OS=Medicago trunc... [more]
F4YFF6_CAMSI8.944e-5594.6960S ribosomal protein L24 (Fragment) OS=Camellia s... [more]
I1JPV1_SOYBN1.168e-5493.81Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
D7TIZ1_VITVI1.168e-5476.03Putative uncharacterized protein OS=Vitis vinifera... [more]

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BLAST of Ca_00749 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RL24_CICAR2.725e-81100.0060S ribosomal protein L24 OS=Cicer arietinum OX=38... [more]
RL241_ARATH6.252e-7491.1060S ribosomal protein L24-1 OS=Arabidopsis thalian... [more]
RL242_ARATH1.437e-7392.9260S ribosomal protein L24-2 OS=Arabidopsis thalian... [more]
RL24_PRUAV5.542e-7393.8160S ribosomal protein L24 OS=Prunus avium OX=42229... [more]
RL24_HORVU7.417e-6988.5060S ribosomal protein L24 OS=Hordeum vulgare OX=45... [more]
RL24_DEBHA5.228e-3250.4760S ribosomal protein L24 OS=Debaryomyces hansenii... [more]
RL24B_YEAST1.930e-3151.3560S ribosomal protein L24-B OS=Saccharomyces cerev... [more]
RL24_ASHGO4.034e-3150.9460S ribosomal protein L24 OS=Ashbya gossypii (stra... [more]
RL24_CANGA9.813e-3151.8960S ribosomal protein L24 OS=Candida glabrata (str... [more]
RL24_GILMI1.601e-3050.0060S ribosomal protein L24 OS=Gillichthys mirabilis... [more]
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Expression

Available Analyses

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Download expression dataset for this feature
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000988Ribosomal protein L24e-relatedPANTHERPTHR1079260S RIBOSOMAL PROTEIN L24coord: 3..164
score: 6.3
IPR000988Ribosomal protein L24e-relatedPFAMPF01246Ribosomal_L24ecoord: 3..73
score: 3.8
IPR011017TRASHSMARTSM00746metallochaperone-like domaincoord: 8..46
score: 0.
IPR023441Ribosomal protein L24e domainGENE3D2.30.170.20no descriptioncoord: 4..67
score: 1.3
IPR023442Ribosomal protein L24e, conserved sitePROSITEPS01073RIBOSOMAL_L24Ecoord: 10..27
score
NoneNo IPR availableCOILcoilcoiled-coilcoord: 112..140
score
NoneNo IPR availableSEGsegsegcoord: 114..139
score: NAcoord: 148..163
score
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 6..58
score: 7.8
NoneNo IPR availableSEGsegsegcoord: 44..62
score
NoneNo IPR availableSEGsegsegcoord: 34..52
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_00749_v1.0_kabuli ID=Ca_00749_v1.0_kabuli; Name=Ca_00749; organism=Cicer arietinum; type=mRNA; length=495bp
ATGGTTCTCAAGACTGAACTTTGCCGATTCAGTGGTGCAAAGATCTACCC
AGGAAGAGGAATCAGATTTATTCGTGGTGATTCTCAGGTTTTCCTGTTTG
TTAACTCAAAATGCAAAAGGTATTTCCACAACCGTTTGAAGCCTTCGAAG
CTTACCTGGACTGCCATGTTCAGGAAGCAACATAAAAAGGACGCTGCTCA
AGAAGCTGTGAAGAAGAGGCGTCGTGCTACCAAAAAGCCATACTCTAGGT
CCATTGTTGGTGCTACTTTGGAAGTCATTCAGAAGAAAAGAACTGAGAAG
CCTGAAGTTCGTGATGCCGCTAGGGAAGCTGCTCTTCGTGAAATTAAGGA
GAGAATCAAGAAAACTAAGGATGAGAAGAAAGCCAAGAAAGCAGAAGTAG
CATCTAAGGCACAAAAATCTCAAGGCAAAGGAAATGTTCAGAAGGGTGCT
TTGCCCAAAGGTCCTAAAATGGGTGGCGGCGGTGGGAAACGCTGA
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protein sequence of Ca_00749_v1.0_kabuli

>Ca_00749_v1.0_kabuli ID=Ca_00749_v1.0_kabuli; Name=Ca_00749_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=164bp
MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSK
LTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEK
PEVRDAAREAALREIKERIKKTKDEKKAKKAEVASKAQKSQGKGNVQKGA
LPKGPKMGGGGGKR
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mRNA from alignment at Ca3:34735670..34737407+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_00749_v1.0_kabuli ID=Ca_00749_v1.0_kabuli; Name=Ca_00749; organism=Cicer arietinum; type=mRNA; length=1738bp; location=Sequence derived from: Ca3:34735670..34737407+ (Cicer arietinum
ATGGTTCTCAAGTACGTATTCTTCTCATCTCCATTTTCTTCCATCATTTT
CTTTCTTACCATCTCATCTCTTCTTTTTCTAACGGTTTCAGCCTCTTCAA
TTCAATATCTCATACGTTCAAAAAAATTAATCTCGTGATTTATGTTTCAA
CAATCCTTTTTTTTTTGTTACTGTAGGATTTAGTTTATTAATCGAGAATT
AGTCTTCTGTTACAATCAGTATTGAGAATTTGATTGAATGCAAAATTTTG
CCATCTAGAGTGTAGTATTCTATGATGGTATTGTAGATTAAAGATAGATA
ATATTTTATTTTATGATTGTAGTTGGCTTCTTGAGTGTGAAAATTTGTCT
AGTATTCAGTATTTAGGATCTGATAGATAGTTCTAAATTGACATTATGTG
TAACATTTTCTAGTTCAAAATAATTGTGTTTTTTATTTTTATTATTTGGG
TTACTTTAAATGAGTACACGCTTGCAATTTTGTGAAGCACTCTTTAAAAT
TCGACGTGGTTTAGAACTGCTTGTTAATGCATTTTCAAATTTTAAACCAT
TTAAGAGAATGTTATTCATTTAAATTAGTTTTTTAGAAATATATCAAGAC
ATAATATGCTGTGTAACTTGACAGATTGTTGGAAATAGTAAACCATGGAC
TTGTAGTTTCAATTCATTTTGATTGAATTAGTCTTGGCGTTCTCAATATA
TTGCTTCCCTAAGTGTTATAATTAGAGATTGATATTGCTATTTCAGGACT
GAACTTTGCCGATTCAGTGGTGCAAAGATCTACCCAGGAAGAGGAATCAG
ATTTATTCGTGGTGATTCTCAGGTGATGTAAAATGTTTTTCTTTGCTTCA
ATATCAGTGTTCTGTTTGCTATGACATGTTCAATCTTAGTTTTACTGATA
TAAGGCTTGTTGTCAATTTTACAGGTTTTCCTGTTTGTTAACTCAAAATG
CAAAAGGTATTTCCACAACCGTTTGAAGCCTTCGAAGCTTACCTGGACTG
CCATGTTCAGGAAGCAACATAAAAAGGTGATTATTTAACTTATATGTTTG
TTATAAGATAGCACAAAGATTATATAATTTAAAACTAAGCTCTTGTACTT
GTTAAAATAAGAATTCAAGGCAATGAACCTATTTACGATGTGAAGATGTT
TTTGCCTGCTTTTACCATGTACTAAGTCATTACACATGTAAACAGATAAC
CTTTAGTAGTTCCTCTATTGATTACATGCATGTGATGTGTAGGACGCTGC
TCAAGAAGCTGTGAAGAAGAGGCGTCGTGCTACCAAAAAGCCATACTCTA
GGTCCATTGTTGGTGCTACTTTGGAAGTCATTCAGAAGAAAAGAACTGAG
AAGCCTGAAGTTCGTGATGCCGCTAGGGAAGCTGCTCTTCGGTTCGTTTC
TTGTTTCTGCTTACTGTTTAAGAGCTCATTTTTAGTGGTTTTCCTGTTTT
ATCACACGATCATGTCATTTGTAACATTAATCATATCATCCCTTTTTTGG
AATAGTCTTATTTTTATTTTGTCTTGTTTTTTCTCTTACAAATATAGATG
ATTTATCTAATTAATGGTGACCATCCTGCAGTGAAATTAAGGAGAGAATC
AAGAAAACTAAGGATGAGAAGAAAGCCAAGAAAGCAGAAGTAGCATCTAA
GGCACAAAAATCTCAAGGCAAAGGAAATGTTCAGAAGGGTGCTTTGCCCA
AAGGTCCTAAAATGGGTGGCGGCGGTGGGAAACGCTGA
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Coding sequence (CDS) from alignment at Ca3:34735670..34737407+

>Ca_00749_v1.0_kabuli ID=Ca_00749_v1.0_kabuli; Name=Ca_00749; organism=Cicer arietinum; type=CDS; length=495bp; location=Sequence derived from: Ca3:34735670..34737407+ (Cicer arietinum
ATGGTTCTCAAGACTGAACTTTGCCGATTCAGTGGTGCAAAGATCTACCC
AGGAAGAGGAATCAGATTTATTCGTGGTGATTCTCAGGTTTTCCTGTTTG
TTAACTCAAAATGCAAAAGGTATTTCCACAACCGTTTGAAGCCTTCGAAG
CTTACCTGGACTGCCATGTTCAGGAAGCAACATAAAAAGGACGCTGCTCA
AGAAGCTGTGAAGAAGAGGCGTCGTGCTACCAAAAAGCCATACTCTAGGT
CCATTGTTGGTGCTACTTTGGAAGTCATTCAGAAGAAAAGAACTGAGAAG
CCTGAAGTTCGTGATGCCGCTAGGGAAGCTGCTCTTCGTGAAATTAAGGA
GAGAATCAAGAAAACTAAGGATGAGAAGAAAGCCAAGAAAGCAGAAGTAG
CATCTAAGGCACAAAAATCTCAAGGCAAAGGAAATGTTCAGAAGGGTGCT
TTGCCCAAAGGTCCTAAAATGGGTGGCGGCGGTGGGAAACGCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000988Ribosomal_eL24-rel
IPR011017TRASH_dom
IPR023441Ribosomal_L24e_dom
IPR023442Ribosomal_L24e_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: KEGG ORTHOLOGY
TermDefinition
K02896RP-L24e, RPL24; large subunit ribosomal protein L24e
Vocabulary: KEGG PATHWAY
TermDefinition
ko03010Ribosome