Ca_00994, Ca_00994_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_00994 vs. TrEMBL
Match: G7KSR6_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_7g109300 PE=4 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 2.670e-46 Identity = 121/270 (44.81%), Postives = 148/270 (54.81%), Query Frame = 1 Query: 1 MESNLENITIITISNPPRDDEPKLPTPVRTRKSKHGPIHVLRVALLMMRGNSKKPSVTNHVDDESNNVWKKFVGSMRPLHLQSNRSPRSVTESNDHQIDRANTLPPPSPCESYGSGSVFADF------------------------------------XXXXXXXXXXXXXXXXXRYASAIGLNE------------------LVQSDEENERQDVIKEECCDHEEDVDGDEKIDAKAEEFIAQFYKQMKLQRFNNVDRYYQERSERSLG 648 ME NLEN I TI N P++D P PV TRK +G + V+R+AL M+RG SKK SV VDD+S ++W+K VGS+RPLHLQSN+SP ++SN + D+ L P SP +S G GSV DF RYASAIGLNE LVQSDEEN+R D+I EEC + +GD+KID KA+EFIAQFY+QM+LQR NNVDR YQERS+RSLG Sbjct: 1 MEPNLENSNI-TIPNLPQEDVEPKPKPVLTRKRNNGAMDVIRLALFMLRGRSKKKSVIP-VDDKSTSIWRKIVGSIRPLHLQSNQSPPLFSQSNSQKFDQPVILLPSSPPQSIGGGSVLTDFPAEEPFSPSPMSPANSCYASAIGLNELVQSDENSRYAASAIGLNELVQSDEDIRYASAIGLNELVQSDEDSRYASAIGLNKLVQSDEENDRNDLIIEEC-----NENGDDKIDDKADEFIAQFYQQMRLQRLNNVDRRYQERSQRSLG 263
BLAST of Ca_00994 vs. TrEMBL
Match: I1NBA8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 9.517e-36 Identity = 100/193 (51.81%), Postives = 120/193 (62.18%), Query Frame = 1 Query: 82 VRTRKSKHGPIHVLRVALLMMRGNSKKPS---VTNHVDDE-SNNVWKKFVGSMRPLHLQSNRSPRSVTESNDHQIDRANTLPPPSPCESYGSGSVFADFXXXXXXXXXXXXXXXXXRYASAIGLNELVQSDEENERQDVIKEECCDHEEDVDGDEKIDAKAEEFIAQFYKQMKLQRFNNVDRYYQERSERSLG 648 V +K G + LRVAL MRG S KP+ V N+ D E S + W KFVGSMRPLHLQS +SPRS +S PS +S G V +DF RYASA+GLNELVQ+DEENE+Q+VI E+ H D DGDE IDAKAE+FIAQFY++MKLQR ++VDR Y ERS+RSLG Sbjct: 27 VSPKKKNGGGMRFLRVALFKMRGRSAKPTALQVDNNEDGERSKSTWGKFVGSMRPLHLQSTQSPRSSPDS-------------PSEYKSDCGGYV-SDFGAEEEPYSPSPPSS---RYASAVGLNELVQNDEENEKQEVIVEDYEQHV-DGDGDEMIDAKAEDFIAQFYQEMKLQRLDSVDRRYVERSQRSLG 201
BLAST of Ca_00994 vs. TrEMBL
Match: C6SZM1_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.163e-33 Identity = 96/189 (50.79%), Postives = 116/189 (61.38%), Query Frame = 1 Query: 82 VRTRKSKHGPIHVLRVALLMMRGNSKKPS---VTNHVDDE-SNNVWKKFVGSMRPLHLQSNRSPRSVTESNDHQIDRANTLPPPSPCESYGSGSVFADFXXXXXXXXXXXXXXXXXRYASAIGLNELVQSDEENERQDVIKEECCDHEEDVDGDEKIDAKAEEFIAQFYKQMKLQRFNNVDRYYQERSE 636 V +K G + LRVAL MRG S KP+ V N+ D E S + W KFVGSMRPLHLQS +SPRS +S PS +S G V +DF RYASA+GLNELVQ+DEENE+Q+VI E+ H D DGDE IDAKAE+FIAQFY++MKLQR ++VDR Y ERS+ Sbjct: 27 VSPKKKNGGSMRFLRVALFKMRGRSAKPTALQVDNNEDGERSKSTWGKFVGSMRPLHLQSTQSPRSSPDS-------------PSEYKSDCGGYV-SDFGAEEEPYSPSPPSS---RYASAVGLNELVQNDEENEKQEVIVEDYEQHV-DGDGDEMIDAKAEDFIAQFYQEMKLQRLDSVDRRYVERSQ 197
BLAST of Ca_00994 vs. TrEMBL
Match: I3SYU8_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 3.385e-33 Identity = 95/216 (43.98%), Postives = 123/216 (56.94%), Query Frame = 1 Query: 16 ENITIITISNPPRDDEPKLPTPVRTRKSKHGPIHVLRVALLMMRGNSKKPSVTNHVDDESNNVWKKFVGSMRPLHLQSNRSPRSVTESNDHQIDRANTLPPPSPCESYGSGSVFADFXXXXXXXXXXXXXXXXXRYASAIGLNELVQS-DEENERQDVI----KEECCDHEEDVDGDEKIDAKAEEFIAQFYKQMKLQRFNNVDRYYQERSERSLG 648 +N I +N + D +LP R +K++ +HV+RVAL MMRG + VDD S +W+K VGSMRPLH+ +RSP + S+ + TLPP S G + RYASA+GLNELVQS D++ E+Q+V E+ D EE DGDE+ID KA EFIAQFY+QMKLQR ++ DR Y ERSERSLG Sbjct: 3 KNAAITLTNNQLQHDHVELPRHPRRKKNR--AMHVIRVALFMMRGGRSRKQSVLPVDDGSKGIWRKLVGSMRPLHI--HRSPSQESISHSSPPNTTTTLPPASLSLLKGKSKSCMN---SPTEEEPYSPSPPSTRYASAVGLNELVQSSDDDCEKQEVKVIVEDEDDDDDEEYFDGDEQIDDKAWEFIAQFYQQMKLQRLDSTDRRYNERSERSLG 211
BLAST of Ca_00994 vs. TrEMBL
Match: K7KGD5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.194e-32 Identity = 96/222 (43.24%), Postives = 121/222 (54.50%), Query Frame = 1 Query: 28 IITISNPPRDDEPKLPTPVRTRKSKH----GPIHVLRVALLMMRGNSKKPSVT-------NHVDDESNNVWKKFVGSMRPLHLQSNRSPRSVTESNDHQIDRANTLPPPSPCESYGS--GSVFADFXXXXXXXXXXXXXXXXXRYASAIGLNELVQSDEENE-RQDVIKEECCDHEEDVDGDEKIDAKAEEFIAQFYKQMKLQRFNNVDRYYQERSERSLGW 651 +I I N + ++ P +S G + LRVAL MRG S KP++ + +DD S + W +FVGSMRPLHLQS +SPRS P P Y G +DF YASA+GL+ELVQ+DEENE +Q+VI E D D DGD IDAKAE+FIAQFY++MKLQR ++VDR Y ERS+RSLGW Sbjct: 9 VINIPNIIKTEQEAKPLQQHASESPKNKSGGGMRFLRVALFKMRGRSAKPTMALQVNNNNDDIDDGSKSTWGRFVGSMRPLHLQSTQSPRS---------------SPDLPSSEYKKDCGGYVSDFVADEQEPYSPSPPISC--YASAVGLSELVQNDEENEYKQEVIVE---DSHVDGDGDWMIDAKAEDFIAQFYQEMKLQRLDSVDRRYVERSQRSLGW 210
BLAST of Ca_00994 vs. TrEMBL
Match: I1L7R9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 6.384e-32 Identity = 92/216 (42.59%), Postives = 118/216 (54.63%), Query Frame = 1 Query: 16 ENITIITISNPPR---DDEPKLPTPVRTRKSKHGPIHVLRVALLMMRGNSKKPSVTNHVDDESNNVWKKFVGSMRPLHLQSNRSPRSVTESNDHQIDRANTLPPPSPC--ESYGSGSVFADFXXXXXXXXXXXXXXXXXRYASAIGLNELVQSDEENERQDVIKEECCDHEEDVDGDEKIDAKAEEFIAQFYKQMKLQRFNNVDRYYQERSERSLG 648 EN II+I +EP + K+ P + +VAL MMRG S+K + VDDES ++W+K VGSMRPLHLQSN + N HQ T PS +S+ S + F + RYASA+GLNE+VQ +EENE+ + D +GDE IDAKAEEFIAQFY QM+LQR + +D +YQE S RSLG Sbjct: 3 ENSMIISIDQKAMVTPHEEPNYNITRSSLKNSMRPKNFFKVALFMMRGRSRKSKMLA-VDDESKSIWRKLVGSMRPLHLQSNHDDDNNNNVNPHQSKMMKTTSAPSENGDDSFDSATEFGN-----------SSSPASSRYASAVGLNEMVQEEEENEKIN---------NNDGEGDEMIDAKAEEFIAQFYHQMRLQRLDVMDHHYQEISMRSLG 197
BLAST of Ca_00994 vs. TrEMBL
Match: K7K5X3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 9.218e-31 Identity = 93/222 (41.89%), Postives = 124/222 (55.86%), Query Frame = 1 Query: 1 MESNLENITIITISNP----PRDDEPKLPTPVRTRKSKHGPIHVLRVALLMMRGNSKKPSVTNHVDDESNNVWKKFVGSMRPLHLQSNRSPRSVTESNDHQIDRANTLPPPSP--CESYGSGSVFADFXXXXXXXXXXXXXXXXXRYASAIGLNELVQSDEENERQDVIKEECCDHEEDVDGDEKIDAKAEEFIAQFYKQMKLQRFNNVDRYYQERSERSLG 648 ME+ EN I++I P ++ T +K K + +VAL MMRG S+K + VDDES ++W+K VGSMRPLHLQSN+SP ++N++ N +PP + + S D RYASA+GLNE+VQ +EE +V KE+ + +D DGDE IDAKAEEFIAQFY QM+LQ + D +YQE S RSLG Sbjct: 1 MEAKAENSMIVSIDQKAIITPHEEPNNNITRSSLKKGKRQK-NFFKVALFMMRGRSRKSKMLA-VDDESKSIWRKLVGSMRPLHLQSNQSPSHDIDNNNNN----NNIPPHQSKMMKITSAPSENGDDGFDSASEFTYSPSPASSRYASAVGLNEMVQEEEE----EVAKEKI--NNDDGDGDEMIDAKAEEFIAQFYHQMRLQSLDVTDDHYQEISMRSLG 210
BLAST of Ca_00994 vs. TrEMBL
Match: C6T762_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 3.751e-24 Identity = 78/192 (40.62%), Postives = 100/192 (52.08%), Query Frame = 1 Query: 16 ENITIITISNPPR---DDEPKLPTPVRTRKSKHGPIHVLRVALLMMRGNSKKPSVTNHVDDESNNVWKKFVGSMRPLHLQSNRSPRSVTESNDHQIDRANTLPPPSP--CESYGSGSVFADFXXXXXXXXXXXXXXXXXRYASAIGLNELVQSDEENERQDVIKEECCDHEEDVDGDEKIDAKAEEFIAQFY 576 EN II+I +EP + K+ P + +VAL MMRG S+K + VDDES ++W+K VGSMRPLHLQSN + N HQ T PS +S+ S + F + RYASA+GLNE+VQ +EENE+ + D +GDE IDAKAEEFIAQFY Sbjct: 3 ENSMIISIDQKAMVTPHEEPNYNITRSSLKNSMRPKNFFKVALFMMRGRSRKSKMLA-VDDESKSIWRKLVGSMRPLHLQSNHDDDNNNNVNPHQSKMMKTTSAPSENGDDSFDSATEFGN-----------SSSPASSRYASAVGLNEMVQEEEENEK---------INNNDGEGDEMIDAKAEEFIAQFY 173
BLAST of Ca_00994 vs. TrEMBL
Match: G7IEH5_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_1g087720 PE=4 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.688e-22 Identity = 77/258 (29.84%), Postives = 123/258 (47.67%), Query Frame = 1 Query: 1 MESNLENITIITISNPPRD----DEPKLPTPVRTRKSKHGPIHVLRVALLMMRGNSKKPSVTNHVDDESNNVWKKFVGSMRPLHLQSNRSPRSVT--ESNDHQIDRANTLPPPSPCESYGSGSVFADFXXXXXXXXXXXXXXXXXRYASAIGLNELVQSDE------------------------------------ENERQDVIKEECCDHEEDVDGDEKIDAKAEEFIAQFYKQMKLQRFNNVDRYYQERSERSLG 648 ME +EN I S P+ D P P+ + S G + +V + M+RG+S+K +D+ES ++WKK +GSMRP+HLQSN+SP + E+N ++ N + + ++F RYASA+GL+E+V+ ++ E E+++ I + ++ ++D D+ IDAKAE+FIA+FY++M+LQR +D Y E S RSLG Sbjct: 1 MEKKVENAMI---SYDPKSKTTLDHIPQPQPILKKGSSKGSKNFFKVVVFMLRGHSRKTKSIMPIDNESKSMWKKLLGSMRPMHLQSNQSPPQILNGENNHKKVVIENNVNSIIDTQGEDGFHNASEFLNSPSPTRSCLASVASSRYASAVGLSEMVEEEKEEEIVEKDNNNNNNNNTNENDDDMIDADAAGLNEMVEEEKKEEIVNKDSNNNNEIDEDDMIDAKAEDFIAKFYREMRLQR---MDVRYNEMSMRSLG 252
BLAST of Ca_00994 vs. TrEMBL
Match: K4CVE3_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc09g075660.2 PE=4 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 3.760e-16 Identity = 68/202 (33.66%), Postives = 93/202 (46.04%), Query Frame = 1 Query: 16 ENITIITISNPPRDDEPKLPTPVRTRKSKHGPIHVLRVALLMMRGNSKK-------PSVTNHVDDESNNVWKKFVGSMRPLHLQSNRSPRSVTESNDHQIDRANTLPPPSPCESYGSGSVFAD-FXXXXXXXXXXXXXXXXXRYASAIGLNELVQSDEENERQDVIKEECCDHEEDVDGDEKIDAKAEEFIAQFYKQMKLQR 597 E I + + +N + + + K K G LR A L R S P VD + N WKK VGSMRPLHLQ N+SP S ++ PP P ++ F++ F +YASA L +L DEE E++D ++ D + GD+ IDAKAE FIAQFY+QM+LQ+ Sbjct: 3 EEIVMNSTNNIDNNKRTPMDDIIVKHKKKQGAFGFLRAASLKFRRRSLDLKQQKFTPEPAPPVDSKGEN-WKKLVGSMRPLHLQDNQSPPSPRDTQ-----------PPPPAKTTSLPVEFSEQFSSMYSPTPSTSSISTMSQYASANNLQDLYDDDEEEEQED--PDQVFD---AIGGDDMIDAKAENFIAQFYEQMRLQK 187 The following BLAST results are available for this feature:
BLAST of Ca_00994 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 18
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BLAST of Ca_00994 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
Expression
Available Analyses Select an Expression Analysis Select a property to group and sort biological samples Select a property to color biological samples Hover the mouse over a column in the graph to view more information about that biological sample. You can click and drag to rearrange groups along the x-axis. You can also click and drag to move the legend. InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_00994_v1.0_kabuli ID=Ca_00994_v1.0_kabuli; Name=Ca_00994; organism=Cicer arietinum; type=mRNA; length=654bpback to top protein sequence of Ca_00994_v1.0_kabuli >Ca_00994_v1.0_kabuli ID=Ca_00994_v1.0_kabuli; Name=Ca_00994_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=217bpback to top mRNA from alignment at Ca3:36693210..36693863- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_00994_v1.0_kabuli ID=Ca_00994_v1.0_kabuli; Name=Ca_00994; organism=Cicer arietinum; type=mRNA; length=654bp; location=Sequence derived from: Ca3:36693210..36693863- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca3:36693210..36693863- >Ca_00994_v1.0_kabuli ID=Ca_00994_v1.0_kabuli; Name=Ca_00994; organism=Cicer arietinum; type=CDS; length=654bp; location=Sequence derived from: Ca3:36693210..36693863- (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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