Ca_01144, Ca_01144_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_01144 vs. TrEMBL
Match: G7KXJ0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_7g112710 PE=4 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 2.264e-58 Identity = 112/126 (88.89%), Postives = 117/126 (92.86%), Query Frame = 1 Query: 1 MNGPTLCFGNKVEDKILKVGEELWRETLPLQGGSGFYQLQGLKPHMWYEVKISYPASIPASFSLQLKRDKSDAVLNNNRRLLNTEKLIFKTGNDQDEPHLILVTVEPEGFPAKQHVLERQFIIFNI 378 M GPTLCFGN VEDKILKVGEELWRETLPL+GGS FYQLQGLKPHMWYEVKISYPASIPASFSLQLKRDKSD V NNNRRLLNTEKLIFKT ++QDE HL+LV VEPEGFPAKQ+V ERQFIIFNI Sbjct: 1 MKGPTLCFGNMVEDKILKVGEELWRETLPLRGGSCFYQLQGLKPHMWYEVKISYPASIPASFSLQLKRDKSDVVRNNNRRLLNTEKLIFKTDSNQDEAHLVLVAVEPEGFPAKQNVPERQFIIFNI 126
BLAST of Ca_01144 vs. TrEMBL
Match: K7MZW6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 1.124e-57 Identity = 111/126 (88.10%), Postives = 117/126 (92.86%), Query Frame = 1 Query: 1 MNGPTLCFGNKVEDKILKVGEELWRETLPLQGGSGFYQLQGLKPHMWYEVKISYPASIPASFSLQLKRDKSDAVLNNNRRLLNTEKLIFKTGNDQDEPHLILVTVEPEGFPAKQHVLERQFIIFNI 378 +NGPTLC GNKVEDKILKVGEELWRETLPLQGGS FYQLQGLKPH WYEVKISYPASIPASFS+QLKR+KSD VLNNNRRLLNTEKLIFKT ++QDE L+LVTVEPEGFPAK HV ERQFIIFNI Sbjct: 12 LNGPTLCLGNKVEDKILKVGEELWRETLPLQGGSCFYQLQGLKPHTWYEVKISYPASIPASFSIQLKRNKSDVVLNNNRRLLNTEKLIFKTNSNQDEFLLVLVTVEPEGFPAKLHVAERQFIIFNI 137
BLAST of Ca_01144 vs. TrEMBL
Match: I1JRA3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 2.503e-57 Identity = 110/126 (87.30%), Postives = 116/126 (92.06%), Query Frame = 1 Query: 1 MNGPTLCFGNKVEDKILKVGEELWRETLPLQGGSGFYQLQGLKPHMWYEVKISYPASIPASFSLQLKRDKSDAVLNNNRRLLNTEKLIFKTGNDQDEPHLILVTVEPEGFPAKQHVLERQFIIFNI 378 +NGPTLCFGNKVEDKILKVGEELWRETLPL GGS FYQLQGLKPH WYEVKISYPASIPASFS+QLKR+KSD VLNNNRRLLNTEKLIFKT ++QDE +LVTVEPEGFPAK HV ERQFIIFNI Sbjct: 15 VNGPTLCFGNKVEDKILKVGEELWRETLPLHGGSCFYQLQGLKPHTWYEVKISYPASIPASFSIQLKRNKSDVVLNNNRRLLNTEKLIFKTNSNQDEFQSVLVTVEPEGFPAKLHVAERQFIIFNI 140
BLAST of Ca_01144 vs. TrEMBL
Match: D7STK0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g00550 PE=4 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 5.080e-34 Identity = 77/122 (63.11%), Postives = 89/122 (72.95%), Query Frame = 1 Query: 25 GNKVEDKILKVGEELWRETLPLQGGSGFYQLQGLKPHMWYEVKISYPASIPASFSLQLKRDKSDAVLNNNRRLLNTEKLIFKTGN----DQDEPHLILVTVEPEGFPAKQHVLERQFIIFNI 378 G+ ++ K+L VG+ELW+ETL LQ GS YQLQGLKP+ WYEVKISYPASIPASFS+QLKR SD LN RRLLNTEKLIFKT N + +LVTVEP G A H ER+ +IFNI Sbjct: 28 GDMIDSKVLNVGKELWKETLQLQMGSCLYQLQGLKPYTWYEVKISYPASIPASFSIQLKRGNSDLGLNRKRRLLNTEKLIFKTDNLDLFSIQDGMYVLVTVEPAGVVAIPHTRERELVIFNI 149
BLAST of Ca_01144 vs. TrEMBL
Match: M5XIV2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023895mg PE=4 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 8.664e-34 Identity = 77/121 (63.64%), Postives = 90/121 (74.38%), Query Frame = 1 Query: 25 GNKVEDKILKVGEELWRETLPLQGGSGFYQLQGLKPHMWYEVKISYPASIPASFSLQLKRDKSDAVLNNNRRLLNTEKLIFKT---GNDQDEPHLILVTVEPEGFPAKQHVLERQFIIFNI 378 GN + K+L VGEELW+ETLPL+ GS YQLQGLKP WYEVKISYPASIPA FS+QLKR ++ L NRRLLNTEKLIFKT G++ +LV+VEPEG A +V ER+ IIFNI Sbjct: 28 GNTTDSKVLNVGEELWKETLPLKMGSRLYQLQGLKPDTWYEVKISYPASIPARFSVQLKRGDLESALTGNRRLLNTEKLIFKTESLGSNDQGGMYVLVSVEPEGVVAIPNVQEREHIIFNI 148
BLAST of Ca_01144 vs. TrEMBL
Match: G7KXJ1_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_7g112710 PE=4 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.251e-32 Identity = 71/81 (87.65%), Postives = 75/81 (92.59%), Query Frame = 1 Query: 136 MWYEVKISYPASIPASFSLQLKRDKSDAVLNNNRRLLNTEKLIFKTGNDQDEPHLILVTVEPEGFPAKQHVLERQFIIFNI 378 MWYEVKISYPASIPASFSLQLKRDKSD V NNNRRLLNTEKLIFKT ++QDE HL+LV VEPEGFPAKQ+V ERQFIIFNI Sbjct: 1 MWYEVKISYPASIPASFSLQLKRDKSDVVRNNNRRLLNTEKLIFKTDSNQDEAHLVLVAVEPEGFPAKQNVPERQFIIFNI 81
BLAST of Ca_01144 vs. TrEMBL
Match: B9HE09_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_819524 PE=4 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 8.392e-29 Identity = 77/125 (61.60%), Postives = 91/125 (72.80%), Query Frame = 1 Query: 22 FGNKVED--KILKVGEELWRETLPLQGGSGFYQLQGLKPHMWYEVKISYPASIPASFSLQLKRDKSDAVLNN-NRRLLNTEKLIFKTG--NDQDEPHL-ILVTVEPEGFPAKQHVLERQFIIFNI 378 FGN D K+L VGEELW++T+PLQ GS Y+LQGLK H WYEVKISYPASIPASF++QLK+D SD +N RRLLNTEKLIF T D ++ L +LV VEPEG A +V ER+ I FNI Sbjct: 24 FGNGGGDDRKVLIVGEELWKQTIPLQLGSRVYELQGLKSHTWYEVKISYPASIPASFTIQLKKDDSDPGMNRVARRLLNTEKLIFMTDVILDSNQSKLCVLVRVEPEGVVAIPNVEERKDITFNI 148
BLAST of Ca_01144 vs. TrEMBL
Match: F4I2E7_ARATH (Uncharacterized protein OS=Arabidopsis thaliana GN=AT1G76480 PE=4 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.096e-28 Identity = 76/132 (57.58%), Postives = 91/132 (68.94%), Query Frame = 1 Query: 1 MNG-PTLCFGNKVEDKILKVGEELWRETLPLQGGSGFYQLQGLKPHMWYEVKISYPASIPASFSLQ-LKRDKSDAVLNNNRRLLNTEKLIFKTGNDQDEPHL----ILVTVEPEGFPAKQHVLERQFIIFNI 378 +NG P LC N + K L VG+ELWRETLPLQ GS Y+LQGLK + WYEVKISYPASIPA SLQ LK + + LN RRLLNTEKLIFK + ++ + +LVT+EPEG A + ER FII+NI Sbjct: 44 VNGLPCLCHDNMFDVKALYVGKELWRETLPLQSGSRVYKLQGLKSNSWYEVKISYPASIPARVSLQLLKNHEMELKLNQMRRLLNTEKLIFKAESLKEVNNKAGLNVLVTLEPEGIVAIPNSRERYFIIYNI 175
BLAST of Ca_01144 vs. TrEMBL
Match: K7KGM7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.991e-28 Identity = 58/72 (80.56%), Postives = 63/72 (87.50%), Query Frame = 1 Query: 163 PASIPASFSLQLKRDKSDAVLNNNRRLLNTEKLIFKTGNDQDEPHLILVTVEPEGFPAKQHVLERQFIIFNI 378 P IPASFS+QLKR+KSD VLNNNRRLLNTEKLIFKT ++QDE +LVTVEPEGFPAK HV ERQFIIFNI Sbjct: 22 PHVIPASFSIQLKRNKSDVVLNNNRRLLNTEKLIFKTNSNQDEFQSVLVTVEPEGFPAKLHVAERQFIIFNI 93 HSP 2 Score: 35.039 bits (79), Expect = 2.991e-28 Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = 3 Query: 69 MERNSAITRWLWLLSITRSETTYVV 143 MERN AIT WL LLSIT S+T +V+ Sbjct: 1 MERNFAITWWLLLLSITGSKTPHVI 25
BLAST of Ca_01144 vs. TrEMBL
Match: Q6NL19_ARATH (At1g20890 OS=Arabidopsis thaliana GN=AT1G20890 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.340e-26 Identity = 71/117 (60.68%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 43 KILKVGEELWRETLPLQGGSGFYQLQGLKPHMWYEVKISYPASIPASFSLQ-LKRDKSDAVLNNNRRLLNTEKLIFKTGN----DQDEPHLILVTVEPEGFPAKQHVLERQFIIFNI 378 K L G+ELW+ETLPL+ GS Y+LQGLK + WYEVKISYPASIPA FSLQ LK +N+ RRLLNTEKLIFKT + D E +LVTVEPEG A +V ER II+NI Sbjct: 34 KTLYAGKELWKETLPLKSGSRVYKLQGLKSNSWYEVKISYPASIPALFSLQLLKNGVMGLKVNHMRRLLNTEKLIFKTESIEEVDNKEGLYVLVTVEPEGIVAIPNVKERPSIIYNI 150 The following BLAST results are available for this feature:
BLAST of Ca_01144 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_01144 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_01144_v1.0_kabuli ID=Ca_01144_v1.0_kabuli; Name=Ca_01144; organism=Cicer arietinum; type=mRNA; length=402bpback to top protein sequence of Ca_01144_v1.0_kabuli >Ca_01144_v1.0_kabuli ID=Ca_01144_v1.0_kabuli; Name=Ca_01144_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=133bpback to top mRNA from alignment at Ca3:38032016..38032827- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_01144_v1.0_kabuli ID=Ca_01144_v1.0_kabuli; Name=Ca_01144; organism=Cicer arietinum; type=mRNA; length=812bp; location=Sequence derived from: Ca3:38032016..38032827- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca3:38032016..38032827- >Ca_01144_v1.0_kabuli ID=Ca_01144_v1.0_kabuli; Name=Ca_01144; organism=Cicer arietinum; type=CDS; length=402bp; location=Sequence derived from: Ca3:38032016..38032827- (Cicer arietinumback to top |