Ca_07285, Ca_07285_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_07285 vs. SwissProt
Match: PYM_ARATH (Protein POLYCHOME OS=Arabidopsis thaliana GN=PYM PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.045e-27 Identity = 79/153 (51.63%), Postives = 93/153 (60.78%), Query Frame = 1 Query: 241 VLPSWYPRTPLRDITSVVRAIERRRGRMGNEEFQQTGAQFSADQFTIFXXXXXXXXXXXXXXXXXFKNSPKSVGIKLRTPYGS-KVPKILFDISNLPEQEGESSELLTPQKKLLNSIDSVEKAVTQELMKMKRTPSAKKAEREKRVRTLMSMR 696 VLPSWYPRTPLRDI++VVRAIERRR RMG + + Q + P S+G K P + KV +IL DI+ E GE + LTP+KKLLNSID VEK V +E+ KMK TPSAK+AEREKRVRTLMSMR Sbjct: 112 VLPSWYPRTPLRDISAVVRAIERRRARMGEGVGRDIETP-TPQQLGVLDSLVPLSGAHLEHDYSMVTPGP-SIGFKRPWPPSTAKVHQILLDITR--ENTGEE-DALTPEKKLLNSIDKVEKVVMEEIQKMKSTPSAKRAEREKRVRTLMSMR 259
BLAST of Ca_07285 vs. SwissProt
Match: GIG1_ARATH (Protein GIGAS CELL1 OS=Arabidopsis thaliana GN=GIG1 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.045e-27 Identity = 101/260 (38.85%), Postives = 125/260 (48.08%), Query Frame = 1 Query: 1 MPEARDRRVNALDVATIFTHRRAS--IFQDSDSLTTGLDLFRAQRTPV------TRGVARA----------RNLHAP-----GIENTPPVTTXXXXXXXXXXXVLPSWYPRTPLRDITSVVRAIERRRGR-MGNEEFQ----QTGAQFSADQFTIFXXXXXXXXXXXXXXXXXFKNSPKSVGIKLRTPYGSKVPKILFDISNLPEQEGESSELLTPQKKLLNSIDSVEKAVTQELMKMKRTPSAKKAEREKRVRTLMSMR 696 MPEARDR +D +TIF +RR + + DS L L + P T G+ R R H P G EN P VT +LPSWYPRTPLRDIT +VRAIERRRG G ++ + T Q + + FK S P +KV K+L DI+ E E + +TP+KKLLNSID VEK V E+ K+K TP AK+ EREKRVRTLM+MR Sbjct: 1 MPEARDRTERPVDYSTIFANRRRHGILLDEPDSR---LSLIESPVNPDIGSIGGTGGLVRGNFTTWRPGNGRGGHTPFRLPQGRENMPIVTARRGRGGG----LLPSWYPRTPLRDITHIVRAIERRRGAGTGGDDGRVIEIPTHRQVGVLESPVPLSGEHKCSMVTPGPSVGFKRSCP--------PSTAKVQKMLLDITK--EIAEEEAGFITPEKKLLNSIDKVEKIVMAEIQKLKSTPQAKREEREKRVRTLMTMR 243
BLAST of Ca_07285 vs. TrEMBL
Match: G7KUG0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_7g092570 PE=4 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 2.234e-60 Identity = 138/242 (57.02%), Postives = 160/242 (66.12%), Query Frame = 1 Query: 1 MPEARDRRVNALDVATIFTHRRASIFQDSDSL---------TTGLDLFRAQRTPVTRGVARARNLHAPGIENTPPVTTXXXXXXXXXXX-VLPSWYPRTPLRDITSVVRAIERRRGRMGNEEFQQTGAQFSADQFTIFXXXXXXXXXXXXXXXXXFKNSPKSVGIKLRTPYGSKVPKILFDISNLPEQEGESSELLTPQKKLLNSIDSVEKAVTQELMKMKRTPSAKKAEREKRVRTLMSMR 696 MPEARDRRV LDV T+F +++FQ+S+ L T GLDLF +RTPV R VARAR +PG ENTPP T LPSWYPRTPL+DIT++VRAIERRR R G EE +QTG A+Q TIF K SPKS IKL+TPYGSKVPKI+ DI+ LP E SELLTPQKKLL+SID +E+ V QELMK+KRTP+AKKAE +KRVRTLMSMR Sbjct: 1 MPEARDRRVIPLDVDTLFRRPFSAVFQESEPLSVTPAPAPFTAGLDLFFTERTPVRREVARARR--SPGSENTPPTTARRGRGRATASRSALPSWYPRTPLQDITAIVRAIERRRERQGTEEIEQTGTPVHANQLTIFSDPSSFSAAIGSSSRVH-KKSPKSC-IKLKTPYGSKVPKIIIDIAKLPAAEDGESELLTPQKKLLHSIDIIEREVKQELMKLKRTPTAKKAEHQKRVRTLMSMR 238
BLAST of Ca_07285 vs. TrEMBL
Match: I1JNH4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 4.222e-51 Identity = 124/233 (53.22%), Postives = 144/233 (61.80%), Query Frame = 1 Query: 1 MPEARDRRVNALDVATIFTHRRAS-IFQDSDSLTTGLDLFRAQRTPVTRGVARARNLHAPGIENTPPVTTXXXXXXXXXXXVLPSWYPRTPLRDITSVVRAIERRRGRMGNEEFQQTGAQFSADQFTIFXXXXXXXXXXXXXXXXXFKNSPKSVGIKLRTPYGSKVPKILFDISNLPEQEGESSELLTPQKKLLNSIDSVEKAVTQELMKMKRTPSAKKAEREKRVRTLMSMR 696 MPE+RDRR+ +D+A RRAS I+ DS L T QRT + R R +PG +NTPP T VLP+WYPRTPLRDIT VV+AIERRR R G E Q+ G+ A + SPKSVG+KLRTP+GSKVPKI DIS LPE + SE LTPQKKLLN+ID VE+AV +EL K+KRTPSAKKAEREKRVRTLMSMR Sbjct: 1 MPESRDRRITVVDLAAAIARRRASFIYIDSPPLRT------PQRTAA---IGRGRASGSPGSQNTPPSTARRGRGRVPSRNVLPAWYPRTPLRDITVVVQAIERRRARSGEAEGQRIGSTDPASDRLVTEPSEPASADSAV-------KSPKSVGVKLRTPFGSKVPKIFLDISELPEDD--ESETLTPQKKLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR 215
BLAST of Ca_07285 vs. TrEMBL
Match: I1N949_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 5.341e-46 Identity = 114/233 (48.93%), Postives = 138/233 (59.23%), Query Frame = 1 Query: 1 MPEARDRRVNALDVATIFTHRRAS-IFQDSDSLTTGLDLFRAQRTPVTRGVARARNLHAPGIENTPPVTTXXXXXXXXXXXVLPSWYPRTPLRDITSVVRAIERRRGRMGNEEFQQTGAQFSADQFTIFXXXXXXXXXXXXXXXXXFKNSPKSVGIKLRTPYGSKVPKILFDISNLPEQEGESSELLTPQKKLLNSIDSVEKAVTQELMKMKRTPSAKKAEREKRVRTLMSMR 696 MP++R RRV +D+A RR S IF ++ +L T P T R R +P +N PP T VLP+W+PRTPLRDIT+VV+AIERR R+G E Q+ G A + SPKSVG+KLRTP+GSKVPKI DIS LPE + SE LTPQKKLL++ID VE+AV +EL K+KRTPSAKK EREKRVRTLMSMR Sbjct: 1 MPQSRHRRVTVVDLAASLARRRVSFIFNEAPTLRT---------PPRTAAFGRGRARASPRSQNIPPSTARRGRGRVPLRSVLPAWFPRTPLRDITAVVQAIERRSARLGEVEGQRIGNTDPASDRLVSEPSEPASASASASAV----KSPKSVGVKLRTPFGSKVPKIFLDISELPEHD--ESEALTPQKKLLDNIDQVEEAVREELNKLKRTPSAKKTEREKRVRTLMSMR 218
BLAST of Ca_07285 vs. TrEMBL
Match: F6HL68_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07790 PE=4 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 5.540e-35 Identity = 110/270 (40.74%), Postives = 132/270 (48.89%), Query Frame = 1 Query: 1 MPEARDRRVNALDVATIFTHRRASIF---QDSDSLTTGLDLFRAQRTPVTR--------------------------------GVARARNLHAP---GIENTPPVTTXXXXXXXXXXXVLPSWYPRTPLRDITSVVRAIERRRGRMGNEEFQQTGAQFSADQFTIFXXXXXXXXXXXXXXXXXFKNSPKSVGIKLRTPYGSKVPKILFDISNLPEQEGESSELLTPQKKLLNSIDSVEKAVTQELMKMKRTPSAKKAEREKRVRTLMSMR 696 MPE+RDR D+A +F RR+ I D ++ L ++R TR G R R ++ G ENTP + VLPSWYPRTPLRDIT VVRAIERRR R+ + QQ D + SP S G+KL KVPKIL DI+ +Q G S+ LTPQKKLLNSID+VEKAV EL K+KRTPSAK+AE+EKRVRTLMSMR Sbjct: 1 MPESRDRLSRPEDIAELFLRRRSGILGILADGSERSSNLFASPSRRETTTRTTTLGARGATGILASRGGGVGRGGFGTPRIGTGRGRGRAVYRSPLFGRENTPATGSGRRGRGRSGNSVLPSWYPRTPLRDITHVVRAIERRRARLREIDGQQIDIPIPQDISDVHDPILPPSSAQLEQDISMISPSPTS-GMKLVPKAVGKVPKILLDIT---DQTGGGSDFLTPQKKLLNSIDTVEKAVMDELGKLKRTPSAKRAEQEKRVRTLMSMR 266
BLAST of Ca_07285 vs. TrEMBL
Match: B9II28_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_576299 PE=4 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 3.591e-34 Identity = 111/262 (42.37%), Postives = 132/262 (50.38%), Query Frame = 1 Query: 1 MPEARDRRVNALDVATIFTHRRAS----IFQDSDSLTTGLDLFRAQRTPVT------------------RGVARARNLHAP-GIENTPPVTTXXXXXXXXXXXVLPSWYPRTPLRDITSVVRAIERRRGRMGNEEFQQTGAQFSADQF-------TIFXXXXXXXXXXXXXXXXXFKNSPKSVGIKLRTPYGSKVPKILFDISNLPEQEGESSELLTPQKKLLNSIDSVEKAVTQELMKMKRTPSAKKAEREKRVRTLMSMR 696 M E+RDR A+D+A IF RR S I+QD L + LF + RT G R R P EN PP + +LPSWYPRTPLRDIT+VVRAIERR GR+G + ++ G+ + T FK P ++G KVPKIL I+N Q E LTPQKKLLNSID+VEK V +EL K+KRTPSAKKAEREKRVRTLMSMR Sbjct: 1 MTESRDRLSRAVDIAAIFAARRQSMNLGIYQDRPELD--MALFGSPRTNTAIRNQTVGVGTITGRGRGRLGTPRGRGGWTPLDRENMPPPGSARRRRGRGSNSLLPSWYPRTPLRDITAVVRAIERR-GRLGGSDGREIGSPMPQGRMDPEFSEATPVAHPEPSNRIMSPKPTPAFKGCPSTIG---------KVPKILQHITN---QASGDPECLTPQKKLLNSIDTVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSMR 247
BLAST of Ca_07285 vs. TrEMBL
Match: B9T2D4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0405710 PE=4 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 8.844e-33 Identity = 109/259 (42.08%), Postives = 135/259 (52.12%), Query Frame = 1 Query: 1 MPEARDRRVNALDVATIFTHRRAS---IFQDSDSLTTGL-------DLFRAQRT------PVTRG----------VARARNLHAP-GIENTPPVTTXXXXXXXXXXXVLPSWYPRTPLRDITSVVRAIERRRGRMGNEEFQQTGAQFSADQFTIFXXXXXXXXXXXXXXXXXFKNSPKSVGIKLRTPYGSKVPKILFDISNLPEQEGESSELLTPQKKLLNSIDSVEKAVTQELMKMKRTPSAKKAEREKRVRTLMSMR 696 MPEARDR +D+AT+F+ RR+ ++QD L T L L A RT P RG R R+ + G ENTP VLPSWYPRTPLRDIT++VRAIERRR +G Q+ + + + P S+ +K P KV KIL DI+N + + SE LTPQKKLLNSID+VEK V +EL K+KRT SAKKAEREK+VRTLMS+R Sbjct: 1 MPEARDRLSRPIDIATVFSRRRSGLIGVYQDQPDLETALFGSPITSRLDTATRTGTVGLSPRGRGRGSFGTPRNQTLRGRHPYVTIGRENTPVT----GRRGNGNRSVLPSWYPRTPLRDITAIVRAIERRRELLGEGRAQEIESPVP-HAYEVPDSSEPSAVAHLEHSNSMMSPIP-SLQVKRCPPTVGKVSKILLDITN---KASDDSEFLTPQKKLLNSIDTVEKEVMEELRKLKRTASAKKAEREKKVRTLMSLR 250
BLAST of Ca_07285 vs. TrEMBL
Match: A9PBY2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_672924 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 9.778e-32 Identity = 104/260 (40.00%), Postives = 127/260 (48.85%), Query Frame = 1 Query: 1 MPEARDRRVNALDVATIFTHRRAS----IFQDSDSLTTGL-------DLFRAQRTPVTRGVARARN-LHAP---------GIENTPPVTTXXXXXXXXXXXVLPSWYPRTPLRDITSVVRAIERRRGRMGNEE-------FQQTGAQFSADQFTIFXXXXXXXXXXXXXXXXXFKNSPKSVGIKLRTPYGSKVPKILFDISNLPEQEGESSELLTPQKKLLNSIDSVEKAVTQELMKMKRTPSAKKAEREKRVRTLMSMR 696 MP +RDR + +D+A +F RR S ++QD L L R Q R R L P G EN PP + VLP+WYPRTPLRD+T+VVRAIERRR R+G + Q + + T K ++G KVPKIL I+N + +S LTPQKKLLNSID+VEK V +EL KMKRTPSA+KAEREKRVRTLMSMR Sbjct: 1 MPVSRDRLSSPVDIAALFAARRQSRILGVYQDQPELDMALFGSPRPNAATRTQTVGAGTIAVRGRGGLGTPRGRGGRTTLGRENIPPPGSARRGRGRGSNSVLPAWYPRTPLRDVTAVVRAIERRRERLGGSDGLEIRSPMPQVRMNHDSSEATPVAHLEHSNRIMSPKPTTAVKGCSSTIG---------KVPKILQHITNQASGDPDS---LTPQKKLLNSIDTVEKVVMEELRKMKRTPSARKAEREKRVRTLMSMR 248
BLAST of Ca_07285 vs. TrEMBL
Match: M4CKE2_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra004677 PE=4 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.178e-31 Identity = 104/237 (43.88%), Postives = 122/237 (51.48%), Query Frame = 1 Query: 1 MPEARDRRVNALDVATIFTHRRA-SIFQDSDSLTTGLDLFRAQRTPVTRGVARARNLHAPG---IENTPPVTTXXXXXXXXXXXVLPSWYPRTPLRDITSVVRAIERRRGRMGNEEFQQTGAQFSADQFTIFXXXXXXXXXXXXXXXXXFKNSPKSVGIKLRTPYGS-KVPKILFDISNLPEQEGESSELLTPQKKLLNSIDSVEKAVTQELMKMKRTPSAKKAEREKRVRTLMSMR 696 MPEARDRR ++D F +RR+ I D L + + QR P + + R A G I T VLPSWYPRTPLRD++SVVRAIERRR R+G+ E T Q SVG K P + KV +IL DI+ E E E LTPQKKLLNSID VEK V +E+ KMK TPSAK+AEREKRVRTLMSMR Sbjct: 1 MPEARDRRERSVDYPAAFLNRRSHGILLDESPLRSPV-----QRLPSSESLVFGRGGFARGNLGIRRTGGGGGRRRGRARASASVLPSWYPRTPLRDVSSVVRAIERRRARVGDVE-TPTPQQLEV-------VLDDSLAPVSGERNYSMVTPGPSVGFKRPWPPSTAKVHQILLDITRQSSAE-EEEEALTPQKKLLNSIDKVEKVVMEEIQKMKSTPSAKRAEREKRVRTLMSMR 223
BLAST of Ca_07285 vs. TrEMBL
Match: M5WA56_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010486mg PE=4 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 5.366e-30 Identity = 91/198 (45.96%), Postives = 109/198 (55.05%), Query Frame = 1 Query: 127 RTPVTRGVARAR---NLHAPGIENTPPVTTXXXXXXXXXXXVLPSWYPRTPLRDITSVVRAIERRRGRMGNEEFQQTGAQFS-----ADQFTIFXXXXXXXXXXXXXXXXXFKNSPKSVGIKLRTPYGSKVPKILFDISNLPEQEGESSELLTPQKKLLNSIDSVEKAVTQELMKMKRTPSAKKAEREKRVRTLMSMR 696 RTP T G R R P ENTPP + VLPSWYPRTPL+DI++VVRAIERRR R+ + Q T Q DQ+ + + P S+G +V KI+ + +N EG E LTPQKKLLNSID+VEK V +EL ++KRTPSAKKAEREKRVRTLMSMR Sbjct: 76 RTPRT-GNGRGRIPFGFTTPARENTPPAGSSRRRRGRSSNSVLPSWYPRTPLQDISAVVRAIERRRARLAENDGQHTEGQVPQGRNILDQYLLVPAVRTK------------QCPPPSIG---------RVQKIIREATNTQTAEG---EFLTPQKKLLNSIDTVEKVVMEELQRLKRTPSAKKAEREKRVRTLMSMR 248
BLAST of Ca_07285 vs. TrEMBL
Match: K4D2T0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc10g080400.1 PE=4 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.119e-27 Identity = 77/152 (50.66%), Postives = 94/152 (61.84%), Query Frame = 1 Query: 241 VLPSWYPRTPLRDITSVVRAIERRRGRMGNEEFQQTGAQFSADQFTIFXXXXXXXXXXXXXXXXXFKNSPKSVGIKLRTPYGSKVPKILFDISNLPEQEGESSELLTPQKKLLNSIDSVEKAVTQELMKMKRTPSAKKAEREKRVRTLMSMR 696 VLP+WYPRTPLRDITS+VRAIER R R+ E +Q + D T PK+ + T KVPKIL DI+N + E +E LTPQ+KLLNSID+VEK V +EL K+KRTPSA+K ER+KRV+TLMSMR Sbjct: 84 VLPAWYPRTPLRDITSIVRAIERTRARLRESEGEQLESVVPQDH-TDLGPSESTSGAQLEHTNSLITPRPKTRS-RYHTRSVGKVPKILLDITN--QSTSEDAECLTPQRKLLNSIDTVEKHVMEELHKLKRTPSARKQERDKRVKTLMSMR 231
BLAST of Ca_07285 vs. DB:Swiss
Match: PYM_ARATH (Protein POLYCHOME OS=Arabidopsis thaliana OX=3702 GN=PYM PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.281e-34 Identity = 81/153 (52.94%), Postives = 96/153 (62.75%), Query Frame = 1 Query: 241 VLPSWYPRTPLRDITSVVRAIERRRGRMGNEEFQQTGAQFSADQFTIFXXXXXXXXXXXXXXXXXFKNSPKSVGIKL-RTPYGSKVPKILFDISNLPEQEGESSELLTPQKKLLNSIDSVEKAVTQELMKMKRTPSAKKAEREKRVRTLMSMR 696 VLPSWYPRTPLRDI++VVRAIERRR RMG E + + Q + S + P S+G K P +KV +IL DI+ E GE + LTP+KKLLNSID VEK V +E+ KMK TPSAK+AEREKRVRTLMSMR Sbjct: 112 VLPSWYPRTPLRDISAVVRAIERRRARMG-EGVGRDIETPTPQQLGVLDSLVPLSGAHLEHDYSMVTPGP-SIGFKRPWPPSTAKVHQILLDITR--ENTGEE-DALTPEKKLLNSIDKVEKVVMEEIQKMKSTPSAKRAEREKRVRTLMSMR 259
BLAST of Ca_07285 vs. DB:Swiss
Match: GIG1_ARATH (Protein GIGAS CELL1 OS=Arabidopsis thaliana OX=3702 GN=GIG1 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 5.982e-34 Identity = 108/256 (42.19%), Postives = 131/256 (51.17%), Query Frame = 1 Query: 1 MPEARDRRVNALDVATIFTHRR--ASIFQDSDSLTTGLDLFRAQRTP------VTRGVARA----------RNLHAP-----GIENTPPVTTXXXXXXXXXXXVLPSWYPRTPLRDITSVVRAIERRRGRMGNEEFQQTGAQFSADQFTIFXXXXXXXXXXXXXXXXXFKNSPKSVGIKLRTPYG-SKVPKILFDISNLPEQEGESSELLTPQKKLLNSIDSVEKAVTQELMKMKRTPSAKKAEREKRVRTLMSMR 696 MPEARDR +D +TIF +RR + + DS L L + P T G+ R R H P G EN P VT RRGR G +LPSWYPRTPLRDIT +VRAIERRRG + + + Q + P S S SVG K P +KV K+L DI+ E E + +TP+KKLLNSID VEK V E+ K+K TP AK+ EREKRVRTLM+MR Sbjct: 1 MPEARDRTERPVDYSTIFANRRRHGILLDEPDSR---LSLIESPVNPDIGSIGGTGGLVRGNFTTWRPGNGRGGHTPFRLPQGRENMPIVTARRGRGGG----LLPSWYPRTPLRDITHIVRAIERRRGAGTGGDDGRVIEIPTHRQVGVLESPVPLSGEHKCS----MVTPGPSVGFKRSCPPSTAKVQKMLLDITK--EIAEEEAGFITPEKKLLNSIDKVEKIVMAEIQKLKSTPQAKREEREKRVRTLMTMR 243 The following BLAST results are available for this feature:
BLAST of Ca_07285 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot) Total hits: 2
BLAST of Ca_07285 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 17
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BLAST of Ca_07285 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 2
Expression
Available Analyses Select an Expression Analysis Select a property to group and sort biological samples Select a property to color biological samples Hover the mouse over a column in the graph to view more information about that biological sample. You can click and drag to rearrange groups along the x-axis. You can also click and drag to move the legend. InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_07285_v1.0_kabuli ID=Ca_07285_v1.0_kabuli; Name=Ca_07285; organism=Cicer arietinum; type=mRNA; length=699bpback to top protein sequence of Ca_07285_v1.0_kabuli >Ca_07285_v1.0_kabuli ID=Ca_07285_v1.0_kabuli; Name=Ca_07285_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=232bpback to top mRNA from alignment at Ca3:29776838..29777789+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_07285_v1.0_kabuli ID=Ca_07285_v1.0_kabuli; Name=Ca_07285; organism=Cicer arietinum; type=mRNA; length=952bp; location=Sequence derived from: Ca3:29776838..29777789+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca3:29776838..29777789+ >Ca_07285_v1.0_kabuli ID=Ca_07285_v1.0_kabuli; Name=Ca_07285; organism=Cicer arietinum; type=CDS; length=699bp; location=Sequence derived from: Ca3:29776838..29777789+ (Cicer arietinumback to top |