Ca_08141, Ca_08141_v1.0_kabuli (mRNA) Cicer arietinum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_08141 vs. SwissProt
Match: ZB14_MAIZE (14 kDa zinc-binding protein OS=Zea mays GN=ZBP14 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 7.095e-12 Identity = 39/73 (53.42%), Postives = 45/73 (61.64%), Query Frame = 1 Query: 1 MASEKEVALATTPPLASESDHPTMFSSIIKKEIPSTVFYEDDEVLAFRDXXXXXXXXXXXXXKVRDGLTGLSK 219
M+SEKE AL D PT+F IIKKEIPSTV YED++VLAFRD KV+DGLTGL+K
Sbjct: 1 MSSEKEAALRRL------DDSPTIFDKIIKKEIPSTVVYEDEKVLAFRDINPQAPTHILIIPKVKDGLTGLAK 67
BLAST of Ca_08141 vs. SwissProt
Match: ZB14_BRAJU (14 kDa zinc-binding protein (Fragment) OS=Brassica juncea PE=1 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 7.342e-9 Identity = 31/51 (60.78%), Postives = 33/51 (64.71%), Query Frame = 1 Query: 67 TMFSSIIKKEIPSTVFYEDDEVLAFRDXXXXXXXXXXXXXKVRDGLTGLSK 219
T+F II KEIPSTV YEDD+VLAFRD KVRDGLTGL K
Sbjct: 2 TIFGKIISKEIPSTVVYEDDKVLAFRDITPQGPVHILLIPKVRDGLTGLFK 52
BLAST of Ca_08141 vs. TrEMBL
Match: G7KP65_MEDTR (14 kDa zinc-binding protein OS=Medicago truncatula GN=MTR_6g026810 PE=4 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.006e-14 Identity = 45/73 (61.64%), Postives = 50/73 (68.49%), Query Frame = 1 Query: 1 MASEKEVALATTPPLASESDHPTMFSSIIKKEIPSTVFYEDDEVLAFRDXXXXXXXXXXXXXKVRDGLTGLSK 219
MASEKE ALA TPP ++D PT+F II KEIPSTV YEDD+VLAFRD KVRDGLTG+SK
Sbjct: 23 MASEKEAALAATPP---DADSPTIFDKIINKEIPSTVVYEDDKVLAFRDIQPQGPVHILLIPKVRDGLTGISK 92
BLAST of Ca_08141 vs. TrEMBL
Match: R0H6I6_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10018194mg PE=4 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 9.957e-14 Identity = 46/73 (63.01%), Postives = 48/73 (65.75%), Query Frame = 1 Query: 1 MASEKEVALATTPPLASESDHPTMFSSIIKKEIPSTVFYEDDEVLAFRDXXXXXXXXXXXXXKVRDGLTGLSK 219
MASEKE ALA TP SD PT+F II KEIPSTV YEDD+VLAFRD KVRDGLTGLSK
Sbjct: 19 MASEKEAALAATP-----SDSPTIFDKIISKEIPSTVVYEDDKVLAFRDITPQGPVHILLIPKVRDGLTGLSK 86
BLAST of Ca_08141 vs. TrEMBL
Match: D7LVG6_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_486090 PE=4 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.218e-13 Identity = 45/73 (61.64%), Postives = 48/73 (65.75%), Query Frame = 1 Query: 1 MASEKEVALATTPPLASESDHPTMFSSIIKKEIPSTVFYEDDEVLAFRDXXXXXXXXXXXXXKVRDGLTGLSK 219
MASEKE ALA TP SD PT+F II KEIPST+ YEDD+VLAFRD KVRDGLTGLSK
Sbjct: 19 MASEKEAALAATP-----SDSPTIFDKIISKEIPSTMVYEDDKVLAFRDITPQGPVHILLIPKVRDGLTGLSK 86
BLAST of Ca_08141 vs. TrEMBL
Match: Q9LXZ1_ARATH (Protein kinase C inhibitor-like protein OS=Arabidopsis thaliana GN=T5P19_140 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.897e-13 Identity = 45/73 (61.64%), Postives = 48/73 (65.75%), Query Frame = 1 Query: 1 MASEKEVALATTPPLASESDHPTMFSSIIKKEIPSTVFYEDDEVLAFRDXXXXXXXXXXXXXKVRDGLTGLSK 219
MASEKE ALA TP SD PT+F II KEIPSTV +EDD+VLAFRD KVRDGLTGLSK
Sbjct: 1 MASEKEAALAATP-----SDSPTIFDKIISKEIPSTVVFEDDKVLAFRDITPQGPVHILLIPKVRDGLTGLSK 68
BLAST of Ca_08141 vs. TrEMBL
Match: Q8GUN2_ARATH (HIS triad family protein 3 OS=Arabidopsis thaliana GN=HIT3 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.897e-13 Identity = 45/73 (61.64%), Postives = 48/73 (65.75%), Query Frame = 1 Query: 1 MASEKEVALATTPPLASESDHPTMFSSIIKKEIPSTVFYEDDEVLAFRDXXXXXXXXXXXXXKVRDGLTGLSK 219
MASEKE ALA TP SD PT+F II KEIPSTV +EDD+VLAFRD KVRDGLTGLSK
Sbjct: 19 MASEKEAALAATP-----SDSPTIFDKIISKEIPSTVVFEDDKVLAFRDITPQGPVHILLIPKVRDGLTGLSK 86
BLAST of Ca_08141 vs. TrEMBL
Match: M4DDX0_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra014689 PE=4 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.897e-13 Identity = 45/73 (61.64%), Postives = 48/73 (65.75%), Query Frame = 1 Query: 1 MASEKEVALATTPPLASESDHPTMFSSIIKKEIPSTVFYEDDEVLAFRDXXXXXXXXXXXXXKVRDGLTGLSK 219
MASEKE ALA TP SD PT+F II KEIPSTV +EDD+VLAFRD KVRDGLTGLSK
Sbjct: 1 MASEKEAALAATP-----SDSPTIFDKIISKEIPSTVVFEDDKVLAFRDITPQGPVHILLIPKVRDGLTGLSK 68
BLAST of Ca_08141 vs. TrEMBL
Match: M4CSQ7_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra007249 PE=4 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.897e-13 Identity = 45/73 (61.64%), Postives = 48/73 (65.75%), Query Frame = 1 Query: 1 MASEKEVALATTPPLASESDHPTMFSSIIKKEIPSTVFYEDDEVLAFRDXXXXXXXXXXXXXKVRDGLTGLSK 219
MASEKE AL+ TP SD PT+F II KEIPSTV YEDD+VLAFRD KVRDGLTGLSK
Sbjct: 1 MASEKEAALSATP-----SDAPTIFDKIISKEIPSTVVYEDDKVLAFRDITPQGPVHILLIPKVRDGLTGLSK 68
BLAST of Ca_08141 vs. TrEMBL
Match: I3T4V1_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.897e-13 Identity = 45/73 (61.64%), Postives = 48/73 (65.75%), Query Frame = 1 Query: 1 MASEKEVALATTPPLASESDHPTMFSSIIKKEIPSTVFYEDDEVLAFRDXXXXXXXXXXXXXKVRDGLTGLSK 219
MASEK+ ALA TPP S PT+F II KEIPSTV YEDD+VLAFRD KVRDGLTGLSK
Sbjct: 14 MASEKDAALAATPP--SSEYTPTIFDRIINKEIPSTVVYEDDKVLAFRDIAPQAPVHILIIPKVRDGLTGLSK 84
BLAST of Ca_08141 vs. TrEMBL
Match: I1N8K4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 6.454e-13 Identity = 45/73 (61.64%), Postives = 47/73 (64.38%), Query Frame = 1 Query: 1 MASEKEVALATTPPLASESDHPTMFSSIIKKEIPSTVFYEDDEVLAFRDXXXXXXXXXXXXXKVRDGLTGLSK 219
MASE E ALA TP SD PT+F II KEIPSTV YEDD+VLAFRD KVRDGLTGLSK
Sbjct: 1 MASETEAALAATP-----SDGPTVFDKIINKEIPSTVVYEDDKVLAFRDIDPQAPTHILIIPKVRDGLTGLSK 68
BLAST of Ca_08141 vs. TrEMBL
Match: C6TF85_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 6.454e-13 Identity = 45/73 (61.64%), Postives = 47/73 (64.38%), Query Frame = 1 Query: 1 MASEKEVALATTPPLASESDHPTMFSSIIKKEIPSTVFYEDDEVLAFRDXXXXXXXXXXXXXKVRDGLTGLSK 219
MASE E ALA TP SD PT+F II KEIPSTV YEDD+VLAFRD KVRDGLTGLSK
Sbjct: 1 MASETEAALAATP-----SDGPTVFDKIINKEIPSTVVYEDDKVLAFRDIDPQAPTHILIIPKVRDGLTGLSK 68
BLAST of Ca_08141 vs. DB:Swiss
Match: HINT1_ARATH (Adenylylsulfatase HINT1 OS=Arabidopsis thaliana OX=3702 GN=HINT1 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.142e-19 Identity = 52/73 (71.23%), Postives = 58/73 (79.45%), Query Frame = 1 Query: 1 MASEKEVALATTPPLASESDHPTMFSSIIKKEIPSTVFYEDDEVLAFRDXXXXXXXXXXXXXKVRDGLTGLSK 219
MASEKE ALA TP SD PT+F II KEIPSTV +EDD+VLAFRDI P+ P HI++IPKVRDGLTGLSK
Sbjct: 19 MASEKEAALAATP-----SDSPTIFDKIISKEIPSTVVFEDDKVLAFRDITPQGPVHILLIPKVRDGLTGLSK 86
BLAST of Ca_08141 vs. DB:Swiss
Match: ZB14_MAIZE (14 kDa zinc-binding protein OS=Zea mays OX=4577 GN=ZBP14 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.814e-15 Identity = 48/73 (65.75%), Postives = 56/73 (76.71%), Query Frame = 1 Query: 1 MASEKEVALATTPPLASESDHPTMFSSIIKKEIPSTVFYEDDEVLAFRDXXXXXXXXXXXXXKVRDGLTGLSK 219
M+SEKE AL D PT+F IIKKEIPSTV YED++VLAFRDI P+AP HI+IIPKV+DGLTGL+K
Sbjct: 1 MSSEKEAALRRL------DDSPTIFDKIIKKEIPSTVVYEDEKVLAFRDINPQAPTHILIIPKVKDGLTGLAK 67
BLAST of Ca_08141 vs. DB:Swiss
Match: ZB14_BRAJU (14 kDa zinc-binding protein (Fragment) OS=Brassica juncea OX=3707 PE=2 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 4.941e-12 Identity = 38/51 (74.51%), Postives = 43/51 (84.31%), Query Frame = 1 Query: 67 TMFSSIIKKEIPSTVFYEDDEVLAFRDXXXXXXXXXXXXXKVRDGLTGLSK 219
T+F II KEIPSTV YEDD+VLAFRDI P+ P HI++IPKVRDGLTGL K
Sbjct: 2 TIFGKIISKEIPSTVVYEDDKVLAFRDITPQGPVHILLIPKVRDGLTGLFK 52 The following BLAST results are available for this feature:
BLAST of Ca_08141 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot) Total hits: 2 Position : 0 Zoom : x 1
BLAST of Ca_08141 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25 Position : 0 Zoom : x 1
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BLAST of Ca_08141 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 3 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_08141_v1.0_kabuli ID=Ca_08141_v1.0_kabuli; Name=Ca_08141; organism=Cicer arietinum; type=mRNA; length=252bpback to top protein sequence of Ca_08141_v1.0_kabuli >Ca_08141_v1.0_kabuli ID=Ca_08141_v1.0_kabuli; Name=Ca_08141_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=83bpback to top mRNA from alignment at Ca3:27660295..27661757+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_08141_v1.0_kabuli ID=Ca_08141_v1.0_kabuli; Name=Ca_08141; organism=Cicer arietinum; type=mRNA; length=1463bp; location=Sequence derived from: Ca3:27660295..27661757+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca3:27660295..27661757+ >Ca_08141_v1.0_kabuli ID=Ca_08141_v1.0_kabuli; Name=Ca_08141; organism=Cicer arietinum; type=CDS; length=252bp; location=Sequence derived from: Ca3:27660295..27661757+ (Cicer arietinumback to top |