Ca_08142, Ca_08142_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_08142
Unique NameCa_08142_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length1473
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca3chromosomeCa3:27654552..27656024 -Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR176Pisum sativum Cameor genome v1aPisum sativum
capsR197Pisum sativum Cameor genome v1aPisum sativum
cavuR163Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR204Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0354Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0086Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0937Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL461Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR172Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR221Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR222Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR171Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR249Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR154Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR078Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR080Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR081Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL439Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR182Cicer arietinum
cacarR183Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Psat3g083240.1Pisum sativum Cameor genome v1aPisum sativum
rna-TanjilR_21781Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
LR48_mrnaVigan03g205300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
evm.model.Chr01.979Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Va03G061590.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg33344.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-KK1_018626Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_022777699.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat03G0279700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vfaba.Hedin2.R1.5g094920.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigun01g099000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Phvul.001G100900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004493232.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_08142-CDS1Ca_08142-CDS1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_08142_v1.0_kabuliCa_08142_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_08142 vs. SwissProt
Match: HNRPD_HUMAN (Heterogeneous nuclear ribonucleoprotein D0 OS=Homo sapiens GN=HNRNPD PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.506e-21
Identity = 52/181 (28.73%), Postives = 91/181 (50.28%), Query Frame = 1 
Query:  328 HRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNSLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPH 870
            H + + R  + A       K+F+ GL WDTT   L + FS++GE+ DC    D ++G+S+G+GF+LFK+       + + + K+  ++              + P      +T E   KKI++  + PD   +K+  +F  FGE+E   L +D  T K +GFC   +K  E  ++ +E+ +
Sbjct:   79 HSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKV--------------IDPKRAKAMKTKE-PVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKY 244
[Close]
BLAST of Ca_08142 vs. SwissProt
Match: HNRPD_MOUSE (Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus GN=Hnrnpd PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.967e-21
Identity = 52/181 (28.73%), Postives = 91/181 (50.28%), Query Frame = 1 
Query:  328 HRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNSLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPH 870
            H + + R  + A       K+F+ GL WDTT   L + FS++GE+ DC    D ++G+S+G+GF+LFK+       + + + K+  ++              + P      +T E   KKI++  + PD   +K+  +F  FGE+E   L +D  T K +GFC   +K  E  ++ +E+ +
Sbjct:   79 HSNSSPRHTEAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKV--------------IDPKRAKAMKTKE-PVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKY 244
[Close]
BLAST of Ca_08142 vs. SwissProt
Match: HNRPD_RAT (Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus GN=Hnrnpd PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.356e-21
Identity = 51/181 (28.18%), Postives = 91/181 (50.28%), Query Frame = 1 
Query:  328 HRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNSLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPH 870
            H + + R  + A       K+F+ GL WDTT   L + FS++G++ DC    D ++G+S+G+GF+LFK+       + + + K+  ++              + P      +T E   KKI++  + PD   +K+  +F  FGE+E   L +D  T K +GFC   +K  E  ++ +E+ +
Sbjct:   77 HSNSSPRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKV--------------IDPKRAKAMKTKE-PVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKY 242
[Close]
BLAST of Ca_08142 vs. SwissProt
Match: HNRDL_CHICK (Heterogeneous nuclear ribonucleoprotein D-like OS=Gallus gallus GN=HNRNPDL PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.141e-19
Identity = 52/182 (28.57%), Postives = 88/182 (48.35%), Query Frame = 1 
Query:  385 KIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNSLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKVV 930
            K+F+ GL WDT+   L    S++GE+ DC   TD V+G+S+G+GF+LFK  +     L+  + K+  ++       I P         +      +   KK+++  + PD   +++  +F  FGEIE   L +D  T + +GFC   Y   E  ++ LE  + +       C+  +  PK V
Sbjct:   31 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLELKEHKLDGKL-------IDP--------KRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSG--KCEIKVAQPKEV 195
[Close]
BLAST of Ca_08142 vs. SwissProt
Match: HNRDL_RAT (Heterogeneous nuclear ribonucleoprotein D-like OS=Rattus norvegicus GN=Hnrnpdl PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.358e-19
Identity = 52/182 (28.57%), Postives = 88/182 (48.35%), Query Frame = 1 
Query:  385 KIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNSLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKVV 930
            K+F+ GL WDT+   L    S++GE+ DC   TD V+G+S+G+GF+LFK  +     L+  + K+  ++       I P         +      +   KK+++  + PD   +++  +F  FGEIE   L +D  T + +GFC   Y   E  ++ LE  + +       C+  +  PK V
Sbjct:   52 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKL-------IDP--------KRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSG--KCEIKVAQPKEV 216
[Close]
BLAST of Ca_08142 vs. SwissProt
Match: HNRDL_MOUSE (Heterogeneous nuclear ribonucleoprotein D-like OS=Mus musculus GN=Hnrnpdl PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.358e-19
Identity = 52/182 (28.57%), Postives = 88/182 (48.35%), Query Frame = 1 
Query:  385 KIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNSLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKVV 930
            K+F+ GL WDT+   L    S++GE+ DC   TD V+G+S+G+GF+LFK  +     L+  + K+  ++       I P         +      +   KK+++  + PD   +++  +F  FGEIE   L +D  T + +GFC   Y   E  ++ LE  + +       C+  +  PK V
Sbjct:   30 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKL-------IDP--------KRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSG--KCEIKVAQPKEV 194
[Close]
BLAST of Ca_08142 vs. SwissProt
Match: HNRDL_HUMAN (Heterogeneous nuclear ribonucleoprotein D-like OS=Homo sapiens GN=HNRNPDL PE=1 SV=3)

HSP 1 Score: 96.2857 bits (238), Expect = 5.358e-19
Identity = 52/182 (28.57%), Postives = 88/182 (48.35%), Query Frame = 1 
Query:  385 KIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNSLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKVV 930
            K+F+ GL WDT+   L    S++GE+ DC   TD V+G+S+G+GF+LFK  +     L+  + K+  ++       I P         +      +   KK+++  + PD   +++  +F  FGEIE   L +D  T + +GFC   Y   E  ++ LE  + +       C+  +  PK V
Sbjct:  149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKL-------IDP--------KRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSG--KCEIKVAQPKEV 313
[Close]
BLAST of Ca_08142 vs. SwissProt
Match: HRP1_YEAST (Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HRP1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.194e-18
Identity = 56/186 (30.11%), Postives = 90/186 (48.39%), Query Frame = 1 
Query:  352 RKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNSLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKA 909
            R  AD      K+F+ GL WDTT   L   F +YG + D K + D  +G+S+G+GF+ F+K S     +K      G          I P         +  P+  +    KI++  +GPD+ P++   FFS++G I +  L LDK TG+ +GF    Y SA++  R  +    +F+   +  ++A
Sbjct:  149 RSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGK--------VIDP--------KRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRA 318
[Close]
BLAST of Ca_08142 vs. SwissProt
Match: HNDLB_XENLA (Heterogeneous nuclear ribonucleoprotein D-like-B OS=Xenopus laevis GN=hnrnpdl-b PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.036e-18
Identity = 54/197 (27.41%), Postives = 90/197 (45.69%), Query Frame = 1 
Query:  271 LEPFTKDQIASLLCEAASKHRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNSLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALE 861
            L   T+  + S L     +H++         D      K+F+ GL WDT+   L    S++GE+ DC   TD V+G+S+G+GF+LFK        L+  + K+  ++              + P      Q  E   KK+++  + P+   +++  +F  FGEIE   L +D  T + +GFC   Y   E  ++ LE
Sbjct:    3 LSEITRSTLVSTLSRLLRRHKE------SNPDFFLIRSKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLETKEHKLDGKL--------------IDPKRAKALQGKE-PPKKVFVGGLSPETTEEQIKQYFGGFGEIENIELPMDTKTNERRGFCFVTYTDEEPVQKLLE 178
[Close]
BLAST of Ca_08142 vs. SwissProt
Match: ROAA_MOUSE (Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus GN=Hnrnpab PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.659e-18
Identity = 52/182 (28.57%), Postives = 87/182 (47.80%), Query Frame = 1 
Query:  385 KIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNSLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKVV 930
            K+FV GL WDT+   L + F+++GE+ DC    D  +G+S+G+GFILFK  S     L + + ++  R+                  P+      +   KKI++  + P+   +K+  +F +FGEIE   L +D    K +GF    +K  +  ++ LE+      G    C+  +  PK V
Sbjct:   76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQKEHRLDGRVI----------------DPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGS--KCEIKVAQPKEV 239
[Close]
BLAST of Ca_08142 vs. TrEMBL
Match: Q2PEU9_TRIPR (Putative uncharacterized protein (Fragment) OS=Trifolium pratense PE=2 SV=1)

HSP 1 Score: 542.732 bits (1397), Expect = 1.142e-151
Identity = 288/414 (69.57%), Postives = 306/414 (73.91%), Query Frame = 1 
Query:  238 QDEDEEPIQKLLEPFTKDQIASLLCEAASKHRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNSLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKVVKTXXXXXXXXXVNSLNPLNHLNQLTQRTQYQRNDNXXXXXXXXXXXXXXXXXXHLMAPAGQGQXXXXXXXXXXXXXXXXXXXXXPALGQALTALLASQXXXXXXXXXXXXXXXXXXVNPGVPTAGHGVQSGYSAQPGINPSVMGGAYGSSVPQ---VQYPNXXXXXXXXXXXXXXXAAPYMGH 1470
            QDED+EPIQKL+EPFTK+QIASLLCEAASKHRDVADRIRKIADGDA+HRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFK+RSGARNALKEPQKKIGNRMTACQLASIGPVQ + QP PQ+ PQ SEYTQ+KIY+SNVGPDLD  KLF FFSRFGEIEEGPLGLDK TGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQ+AIDGPKVVKT            +NPLN LN LTQRTQYQRNDN                  HLMAP G                        PALGQALTALLASQ                  VNPG+P AGHGVQ+GY AQP I+ SVM GAYG+++PQ   +QYPN               AAPY GH
Sbjct:   11 QDEDDEPIQKLIEPFTKEQIASLLCEAASKHRDVADRIRKIADGDASHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARNALKEPQKKIGNRMTACQLASIGPVQQTPQPVPQLVPQGSEYTQRKIYVSNVGPDLDGSKLFGFFSRFGEIEEGPLGLDKVTGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQRAIDGPKVVKTQQHQQSLPQ-QHVNPLNQLNPLTQRTQYQRNDN--VGYVGGSSLAVSQPGGHLMAPTGPA------AGYNQAAASGLNPVLTPALGQALTALLASQGATLGLSNLLGSLGTSSAVNPGIPAAGHGVQNGYGAQPTISSSVM-GAYGNTLPQAGLLQYPNQQIGQGGSGRGQYGGAAPYTGH 414
[Close]
BLAST of Ca_08142 vs. TrEMBL
Match: Q2PET5_TRIPR (Putative uncharacterized protein (Fragment) OS=Trifolium pratense PE=2 SV=1)

HSP 1 Score: 542.732 bits (1397), Expect = 1.142e-151
Identity = 288/414 (69.57%), Postives = 306/414 (73.91%), Query Frame = 1 
Query:  238 QDEDEEPIQKLLEPFTKDQIASLLCEAASKHRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNSLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKVVKTXXXXXXXXXVNSLNPLNHLNQLTQRTQYQRNDNXXXXXXXXXXXXXXXXXXHLMAPAGQGQXXXXXXXXXXXXXXXXXXXXXPALGQALTALLASQXXXXXXXXXXXXXXXXXXVNPGVPTAGHGVQSGYSAQPGINPSVMGGAYGSSVPQ---VQYPNXXXXXXXXXXXXXXXAAPYMGH 1470
            QDED+EPIQKL+EPFTK+QIASLLCEAASKHRDVADRIRKIADGDA+HRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFK+RSGARNALKEPQKKIGNRMTACQLASIGPVQ + QP PQ+ PQ SEYTQ+KIY+SNVGPDLD  KLF FFSRFGEIEEGPLGLDK TGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQ+AIDGPKVVKT            +NPLN LN LTQRTQYQRNDN                  HLMAP G                        PALGQALTALLASQ                  VNPG+P AGHGVQ+GY AQP I+ SVM GAYG+++PQ   +QYPN               AAPY GH
Sbjct:   79 QDEDDEPIQKLIEPFTKEQIASLLCEAASKHRDVADRIRKIADGDASHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARNALKEPQKKIGNRMTACQLASIGPVQQTPQPVPQLVPQGSEYTQRKIYVSNVGPDLDGSKLFGFFSRFGEIEEGPLGLDKVTGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQRAIDGPKVVKTQQHQQSLPQ-QHVNPLNQLNPLTQRTQYQRNDN--VGYVGGSSLAVSQPGGHLMAPTGPA------AGYNQAAASGLNPVLTPALGQALTALLASQGATLGLSNLLGSLGTSSAVNPGIPAAGHGVQNGYGAQPTISSSVM-GAYGNTLPQAGLLQYPNQQIGQGGSGRGQYGGAAPYTGH 482
[Close]
BLAST of Ca_08142 vs. TrEMBL
Match: Q8LLE6_VICFA (RNA-binding protein AKIP1 OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 517.309 bits (1331), Expect = 5.138e-144
Identity = 284/419 (67.78%), Postives = 303/419 (72.32%), Query Frame = 1 
Query:  241 DEDEEPIQKLLEPFTKDQIASLLCEAASKHRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNSLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKVVKT-XXXXXXXXXVNSLNPLNHLNQL---TQRTQYQRNDNXXXXXXXXXXXXXXXXXXHLMAPAGQGQXXXXXXXXXXXXXXXXXXXXXPALGQALTALLASQXXXXXXXXXXXXXXXXXXVN-PGVPTAGHGVQSGYSAQPGINPSVMGGAYGSSVP----QVQYPNXXXXXXXXXXXXXXXAAPYMGH 1470
            +ED+EPI+ L+EPFTK+QIA+LLCEAA+KHRDVADRIRKIADGDA+HRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDK SGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPV  + QP  Q+    SEYTQ+KIYISNVGP+LDP KLF +FSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARR+LEEPHKEFEGHILHCQ+AIDGPK  KT          VNSLN  N LNQL   TQRTQ+QRNDN                  HLMAPAG                        PALGQALTALLASQ                  +N  GVP AGHGVQSGYSAQP I+PSVM GAYG+SVP    QVQYPN               AA YMGH
Sbjct:  104 EEDDEPIKDLVEPFTKEQIATLLCEAAAKHRDVADRIRKIADGDASHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKASGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVAQTPQPAVQLVQPGSEYTQRKIYISNVGPELDPHKLFAYFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRSLEEPHKEFEGHILHCQRAIDGPKAGKTQHPQPQQLQHVNSLNQFNQLNQLNPATQRTQFQRNDN---VGYVGGSSVAVSQPGHLMAPAG---PTIGYNQAAASAAQGLNPVLTPALGQALTALLASQGATLGLSDLLGSLGTSNALNHGGVPAAGHGVQSGYSAQPTISPSVM-GAYGNSVPQVGLQVQYPNQQIGQGGSGRGQYGGAASYMGH 515
[Close]
BLAST of Ca_08142 vs. TrEMBL
Match: Q2HUH7_MEDTR (RNA-binding region RNP-1 (RNA recognition motif) OS=Medicago truncatula GN=MtrDRAFT_AC149134g13v2 PE=1 SV=1)

HSP 1 Score: 510.76 bits (1314), Expect = 4.809e-142
Identity = 282/416 (67.79%), Postives = 300/416 (72.12%), Query Frame = 1 
Query:  241 DEDEEPIQKLLEPFTKDQIASLLCEAASKHRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQN----SLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKVVK-TXXXXXXXXXVNSLNPLNHLNQLTQRTQYQRNDNXXXXXXXXXXXXXXXXXXHLMAPAGQGQXXXXXXXXXXXXXXXXXXXXXPALGQALTALLASQXXXXXXXXXXXXXXXXXXVNPGVPTAGHGVQSGYSAQPGINPSVMGGAYGSSVPQV----QYPNXXXXXXXXXXXXXXXAAPY 1461
            +ED+EPIQKLLEPF+K+QI+SLLCEAASKHRDVADRIRKIADGDA+HRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFK+RSGARNALKEPQKKIGNRMTACQLASIGPVQ     +  P P V    SEYTQ+KIYISNVGP+LD QKLF FFSRFGEIEEGPLGLDK TGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPK  K           VNS+N LN LN L+QRTQ+QR+DN                  HLMAPAG                        PALGQALTALLASQ                  VNPGVP AGHGVQSGYSAQP I+P+VM GAYG++VPQ      YPN               AAPY
Sbjct:   80 EEDDEPIQKLLEPFSKEQISSLLCEAASKHRDVADRIRKIADGDASHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARNALKEPQKKIGNRMTACQLASIGPVQQTPVVAAAPAPLVV-AGSEYTQRKIYISNVGPELDAQKLFGFFSRFGEIEEGPLGLDKVTGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKPTKIQHQPQQQQQHVNSVNHLNQLNPLSQRTQFQRHDN---VGFMGGSSVAVSQPGHLMAPAGP-VTGYNQAAASASAAQGLNPALTPALGQALTALLASQGATLGLGNLLGSLGVSSAVNPGVPAAGHGVQSGYSAQPTISPTVM-GAYGNTVPQAGLQGLYPNQQLGQGGSGRGQYGGAAPY 489
[Close]
BLAST of Ca_08142 vs. TrEMBL
Match: G7L3S2_MEDTR (RNA-binding protein OS=Medicago truncatula GN=MTR_7g088140 PE=4 SV=1)

HSP 1 Score: 508.064 bits (1307), Expect = 3.117e-141
Identity = 278/397 (70.03%), Postives = 296/397 (74.56%), Query Frame = 1 
Query:  241 DEDEEPIQKLLEPFTKDQIASLLCEAASKHRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQN----SLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKVVK-TXXXXXXXXXVNSLNPLNHLNQLTQRTQYQRNDNXXXXXXXXXXXXXXXXXXHLMAPAGQGQXXXXXXXXXXXXXXXXXXXXXPALGQALTALLASQXXXXXXXXXXXXXXXXXXVNPGVPTAGHGVQSGYSAQPGINPSVMGGAYGSSVPQV----QYPN 1404
            +ED+EPIQKLLEPF+K+QI+SLLCEAASKHRDVADRIRKIADGDA+HRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFK+RSGARNALKEPQKKIGNRMTACQLASIGPVQ     +  P P V    SEYTQ+KIYISNVGP+LD QKLF FFSRFGEIEEGPLGLDK TGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPK  K           VNS+N LN LN L+QRTQ+QR+DN                  HLMAPAG                        PALGQALTALLASQ                  VNPGVP AGHGVQSGYSAQP I+P+VM GAYG++VPQ      YPN
Sbjct:   80 EEDDEPIQKLLEPFSKEQISSLLCEAASKHRDVADRIRKIADGDASHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARNALKEPQKKIGNRMTACQLASIGPVQQTPVVAAAPAPLVV-AGSEYTQRKIYISNVGPELDAQKLFGFFSRFGEIEEGPLGLDKVTGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKPTKIQHQPQQQQQHVNSVNHLNQLNPLSQRTQFQRHDN---VGFMGGSSVAVSQPGHLMAPAGP-VTGYNQAAASASAAQGLNPALTPALGQALTALLASQGATLGLGNLLGSLGVSSAVNPGVPAAGHGVQSGYSAQPTISPTVM-GAYGNTVPQAGLQGLYPN 470
[Close]
BLAST of Ca_08142 vs. TrEMBL
Match: G7L3S1_MEDTR (RNA-binding protein OS=Medicago truncatula GN=MTR_7g088140 PE=4 SV=1)

HSP 1 Score: 485.337 bits (1248), Expect = 3.364e-137
Identity = 263/370 (71.08%), Postives = 277/370 (74.86%), Query Frame = 1 
Query:  241 DEDEEPIQKLLEPFTKDQIASLLCEAASKHRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQN----SLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKVVK-TXXXXXXXXXVNSLNPLNHLNQLTQRTQYQRNDNXXXXXXXXXXXXXXXXXXHLMAPAGQGQXXXXXXXXXXXXXXXXXXXXXPALGQALTALLASQXXXXXXXXXXXXXXXXXXVNPGVPTAGHGVQSGYSAQ 1335
            +ED+EPIQKLLEPF+K+QI+SLLCEAASKHRDVADRIRKIADGDA+HRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFK+RSGARNALKEPQKKIGNRMTACQLASIGPVQ     +  P P V    SEYTQ+KIYISNVGP+LD QKLF FFSRFGEIEEGPLGLDK TGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPK  K           VNS+N LN LN L+QRTQ+QR+DN                  HLMAPAG                        PALGQALTALLASQ                  VNPGVP AGHGVQSGYSAQ
Sbjct:   80 EEDDEPIQKLLEPFSKEQISSLLCEAASKHRDVADRIRKIADGDASHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARNALKEPQKKIGNRMTACQLASIGPVQQTPVVAAAPAPLVV-AGSEYTQRKIYISNVGPELDAQKLFGFFSRFGEIEEGPLGLDKVTGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKPTKIQHQPQQQQQHVNSVNHLNQLNPLSQRTQFQRHDN---VGFMGGSSVAVSQPGHLMAPAGP-VTGYNQAAASASAAQGLNPALTPALGQALTALLASQGATLGLGNLLGSLGVSSAVNPGVPAAGHGVQSGYSAQ 444

HSP 2 Score: 32.3426 bits (72), Expect = 3.364e-137
Identity = 16/21 (76.19%), Postives = 17/21 (80.95%), Query Frame = 2 
Query: 1397 IRTSRLDRVVLEEGNMVVLHL 1459
            I+ S LDRVVLEEGNMV  HL
Sbjct:  451 IQISSLDRVVLEEGNMVEPHL 471
[Close]
BLAST of Ca_08142 vs. TrEMBL
Match: K7MY09_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 453.751 bits (1166), Expect = 6.977e-125
Identity = 251/421 (59.62%), Postives = 277/421 (65.80%), Query Frame = 1 
Query:  238 QDEDEEPIQKLLEPFTKDQIASLLCEAASKHRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNSLQPTPQV----TPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKVVKTXXXXXXXXXVNSLNPLNHLNQLTQRTQYQRNDNXXXXXXXXXXXXXXXXXXHLMAPAGQGQXXXXXXXXXXXXXXXXXXXXXPALGQALTALLASQXXXXXXXXXXXXXXXXXXVNPGVPTAGHGVQSGYSAQPGINPSVMGGAYGSSVP-QVQYPN-----XXXXXXXXXXXXXXXAAPYMGH 1470
            QDED++PI KLLEP +KDQ+  LLCEAA+KH+DVA+RIR+ AD D  HRKIFVHGLGWDTT+ TLI++F QYGEIEDCKAVTDKVSGKSKGYGFILFK R GARNALKEPQKKIGNRMTACQLASIGPV N  Q  P      +   SEYTQKKIY+SNVG DLDPQKL  FFSRFGEIEEGPLGLDKATGKPKGFCLFVY+S ESARRALEEPHK+FEGHILHCQKAIDGPK  K             L    ++N   QR Q+QRN +                  HLMAPAG G                      PA+ QALTALLASQ                  VNPGVP+AG  VQ GYSAQP I+P V+GG YG+ V  Q+ YPN                    +APYMGH
Sbjct:   81 QDEDDDPISKLLEPLSKDQLLILLCEAAAKHQDVAERIRRAADEDPVHRKIFVHGLGWDTTAGTLISSFRQYGEIEDCKAVTDKVSGKSKGYGFILFKTRRGARNALKEPQKKIGNRMTACQLASIGPVSNPPQTAPPAVAAPSSSVSEYTQKKIYVSNVGADLDPQKLLAFFSRFGEIEEGPLGLDKATGKPKGFCLFVYRSPESARRALEEPHKDFEGHILHCQKAIDGPKAGK-------------LQQHGNVNAQAQRAQFQRNGSVGTNAAAGYGGGAALQPGHLMAPAGPG-------IGFNQSAAAAQAALNPAMAQALTALLASQ-GTLGLTNLLGSIGTSAAVNPGVPSAGAAVQGGYSAQPNISPGVVGG-YGNQVGLQLAYPNQNQNQQIGQGGSGRGQYGGGSAPYMGH 479
[Close]
BLAST of Ca_08142 vs. TrEMBL
Match: I1JMX0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 444.891 bits (1143), Expect = 3.241e-122
Identity = 251/421 (59.62%), Postives = 274/421 (65.08%), Query Frame = 1 
Query:  238 QDEDEEPIQKLLEPFTKDQIASLLCEAASKHRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQN----SLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKVVKTXXXXXXXXXVNSLNPLNHLNQLTQRTQYQRNDN-XXXXXXXXXXXXXXXXXXHLMAPAGQGQXXXXXXXXXXXXXXXXXXXXXPALGQALTALLASQXXXXXXXXXXXXXXXXXXVNPGVPTAGHGVQ-SGYSAQPGINPSVMGGAYGSSVP-QVQYPN---XXXXXXXXXXXXXXXAAPYMGH 1470
            QDED+ PI KLLEP  KDQ+ +LLC+AA+KHRDV +RIRK ADGD  HRKIFVHGLGWDTT+ TLI+AF QYGEIEDCKAVTDKVSGKSKGYGFILFK R GA+NALKEPQKKIGNRMTACQLASIGPV N     + P+   +   SEYTQKKIY+SNVG DLDPQKL  FFSRFGEIEEGPLGLDKATGKPKGFCLFVY++ ESARRALEEPHK+FEGHILHCQKAIDGPK  K                  ++N   QR Q+QRN N                   HLMAPAG G                      PA+ QALTALLASQ                  VNPGVP AG  VQ  GYSAQP I+P V+GG YG+ V  Q  YPN                  AAPYMGH
Sbjct:   87 QDEDDIPISKLLEPLGKDQLLNLLCDAAAKHRDVEERIRKAADGDPVHRKIFVHGLGWDTTAGTLISAFRQYGEIEDCKAVTDKVSGKSKGYGFILFKTRRGAQNALKEPQKKIGNRMTACQLASIGPVSNPPPTPMAPSAAPSSSVSEYTQKKIYVSNVGADLDPQKLLAFFSRFGEIEEGPLGLDKATGKPKGFCLFVYRNPESARRALEEPHKDFEGHILHCQKAIDGPKAGK----------FQQQQQHGNVNAHAQRAQFQRNSNVGANAAAGYGGGGSAVQPGHLMAPAGPG------IGFNPSAAAAAQAALNPAMAQALTALLASQ-GTLGLTNLLGSIGTSAAVNPGVPAAGSAVQGGGYSAQPNISPGVVGG-YGNQVGLQAAYPNQNQQIGQGGSGRGQYGGGAAPYMGH 489
[Close]
BLAST of Ca_08142 vs. TrEMBL
Match: B9HDH2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_560285 PE=4 SV=1)

HSP 1 Score: 412.149 bits (1058), Expect = 2.328e-112
Identity = 232/419 (55.37%), Postives = 257/419 (61.34%), Query Frame = 1 
Query:  241 DEDEEPIQKLLEPFTKDQIASLLCEAASKHRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPV-QNSLQPT------PQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKVVKTXXXXXXXXXVNSLNPLNHLNQLTQRTQYQRNDNXXXXXXXXXXXXXXXXXXHLMAPAGQGQXXXXXXXXXXXXXXXXXXXXXPALGQALTALLASQ--XXXXXXXXXXXXXXXXXXVNPGVPTAGHGVQSGYSAQPGINPSVMGGAYGSSVPQVQYPNXXXXXXXXXXXXXXXAAPYMGH 1470
            DEDEEPI+KLLEPF KDQ+ +LL EAA  HRDVAD+IR++AD D  HRKIFVHGLGWDT +  LINAF  YGEIEDCKAV DKV+GKSKGYGFILFKKRSGARNALKEPQKKIGNRM ACQLAS GPV Q+S  P+       Q     SEYT +KIY+SNVG +LDPQKL +FFS FGEIEEGPLGLDKATGKPKGFCLFVYK+ ESA++ALEEPHK FEGHILHCQKA+DGPK  K+              P  H N   Q + YQRND                   HLMAPA  G                      PALGQALTALLA+Q                       GVP+A HG+Q  Y  Q  I+P V+G        Q  YPN                 PYMGH
Sbjct:   83 DEDEEPIEKLLEPFGKDQLINLLREAADGHRDVADKIRQVADQDPVHRKIFVHGLGWDTNAEALINAFKPYGEIEDCKAVCDKVTGKSKGYGFILFKKRSGARNALKEPQKKIGNRMAACQLASTGPVPQSSAGPSGPIAAAAQTQQPVSEYTLRKIYVSNVGANLDPQKLMSFFSEFGEIEEGPLGLDKATGKPKGFCLFVYKTVESAKKALEEPHKSFEGHILHCQKAVDGPKHAKSQKP-----------PQQHHNM--QSSHYQRNDG-------GGYVASGGRGGHLMAPAAAG-------AGIGFNQSAAAPALNPALGQALTALLATQGAGLGGLTNLLGTLGSAAAVTQGGVPSAAHGMQGAYGNQASISPGVIGAYANQGAMQGGYPNQQMGQGGSGRGQHGQYTPYMGH 474
[Close]
BLAST of Ca_08142 vs. TrEMBL
Match: B9S7Y1_RICCO (Heterogeneous nuclear ribonucleoprotein A1, putative OS=Ricinus communis GN=RCOM_1382750 PE=4 SV=1)

HSP 1 Score: 406.371 bits (1043), Expect = 1.277e-110
Identity = 225/381 (59.06%), Postives = 251/381 (65.88%), Query Frame = 1 
Query:  244 EDEEPIQKLLEPFTKDQIASLLCEAASKHRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNSLQPTPQVTP---QTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKVVKTXXXXXXXXXVNSLNPLNHLNQLTQRTQYQRNDNXXXXXXXXXXXXXXXXXXHLMAPAGQGQXXXXXXXXXXXXXXXXXXXXXPALGQALTALLASQXXXXXXXXXXXXXXXXXXVNPGVPTAGHGVQSGYSAQPGINPSVMGGAYGS 1377
            +D++PI+ LLEPF K+Q+ +LL EA+ KHRDVADRIRKIAD D AHRKIFVHGLGWD+T+ TL NAF QYGEIEDCKAV DKVSGKSKGYGFILFKKRSGAR AL+EPQKKIGNRMTACQLAS+GPV  S  P     P   Q SEYTQ+KIYISNVG DLDPQ+L +FFS+FGEIEEGPLGLDK TGKPKGFCLFVYKS ESA++ALEEPHK FEGHILHCQKA+DGPK  K            S     H N   Q++ +QRN N                  HLMAPA                         PALGQALTALLASQ                     GVP A  G+Q  Y  QP I+P V+G  YG+
Sbjct:   89 DDDDPIENLLEPFGKEQLVNLLKEASDKHRDVADRIRKIADADPAHRKIFVHGLGWDSTAETLTNAFKQYGEIEDCKAVCDKVSGKSKGYGFILFKKRSGARKALEEPQKKIGNRMTACQLASMGPVPTSTAPANTPAPGQQQVSEYTQRKIYISNVGADLDPQQLTSFFSKFGEIEEGPLGLDKLTGKPKGFCLFVYKSVESAKKALEEPHKNFEGHILHCQKAVDGPKHGK------------SQQQQQHHN--VQKSHFQRNGN-----AGGYSGRNVPGPAHLMAPAA--------PPGIGYQGAAGAPALNPALGQALTALLASQGAGLGLNLLGSLGSAAAVNQGGVPGAAAGMQGAYGNQPSISPGVIG--YGN 440
[Close]
BLAST of Ca_08142 vs. DB:Swiss
Match: UBA2A_ARATH (UBP1-associated protein 2A OS=Arabidopsis thaliana OX=3702 GN=UBA2A PE=1 SV=1)

HSP 1 Score: 379.407 bits (973), Expect = 2.937e-126
Identity = 231/392 (58.93%), Postives = 263/392 (67.09%), Query Frame = 1 
Query:  238 QDEDEEPIQKLLEPFTKDQIASLLCEAASKHRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPV-----QNSLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKVVKTXXXXXXXXXVNSLNPLNHLNQLTQRTQYQRNDNXXXXXXXXXXXXXXXXXXHLMA--PAGQGQXXXXXXXXXXXXXXXXXXXXXPALGQALTALLASQXXXXX-----XXXXXXXXXXXXXVNP----GVPTAGHGVQS-------GYSAQPGI 1344
            +D+D+EPIQ LLEPF+K+Q+ SLL EAA KH DVA+RIR++AD D  HRKIFVHGLGWDT + TLI AF QYGEIEDCKAV DK+SGKSKGYGFIL+K RSGARNALK+PQKKIG+RMTACQLAS GPV       +   +       SE+TQKKIY+SNVG +LDPQKL  FFS+FGEIEEGPLGLDK TG+PKGFCLFVYKS+ESA+RALEEPHK FEGHILHCQKAIDGPK  K           N  NP           +YQRNDN G+   GG           LMA  PAG G                    + PA+GQALTALLASQGA L         LLGSLGT+  VNP    G+PT G+G Q+       GY  QPG+
Sbjct:   92 EDDDDEPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKAIDGPKPGKQQQHHHNPHAYN--NP-----------RYQRNDNNGYGPPGGHGH--------LMAGNPAGMG--------------GPTAQVINPAIGQALTALLASQGAGLAFNPAIGQALLGSLGTAAGVNPGNGVGMPT-GYGTQAMAPGTMPGYGTQPGL 447
[Close]
BLAST of Ca_08142 vs. DB:Swiss
Match: UBA2B_ARATH (UBP1-associated protein 2B OS=Arabidopsis thaliana OX=3702 GN=UBA2B PE=2 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 6.942e-122
Identity = 210/372 (56.45%), Postives = 237/372 (63.71%), Query Frame = 1 
Query:  268 LLEPFTKDQIASLLCEAASKHRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNS--LQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKVVKTXXXXXXXXXVNSLNPLNHLNQLTQRTQYQRNDNXXXXXXXXXXXXXXXXXXHLMAPAGQGQXXXXXXXXXXXXXXXXXXXXXPALGQALTALLASQXXXXXXXXXXXXXXXXXXVNPGVPTAGHGVQSGYSAQPGINPSVMGGAYGS 1377
            LLEPF+KDQ+  LL EAA +HRDVA+RIR +AD D  HRKIFVHGLGWDT + +LI+AF QYGEIEDCK V DKVSG+SKGYGFILFK RSGARNALK+PQKKIG RMTACQLASIGPVQ +  + P     P   E  Q+KIY+SNV  D+DPQKL  FFSRFGEIEEGPLGLDKATG+PKGF LFVY+S ESA++ALEEPHK FEGH+LHC KA DGPK VK H               NH N   Q ++YQRNDN G                   AP G G           A       A  PA+GQALTALLASQ       N          +    P A  G+ SGY  Q  I+P V  G YG+
Sbjct:   90 LLEPFSKDQLLILLKEAAERHRDVANRIRIVADEDLVHRKIFVHGLGWDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKIGTRMTACQLASIGPVQGNPVVAPAQHFNP---ENVQRKIYVSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKATGRPKGFALFVYRSLESAKKALEEPHKTFEGHVLHCHKANDGPKQVKQHQH-------------NH-NSHNQNSRYQRNDNNG-----------------YGAPGGHGH--------FIAGNNQAVQAFNPAIGQALTALLASQ-GAGLGLNQAFGQALLGTLGTASPGAVGGMPSGYGTQANISPGVYPG-YGA 417
[Close]
BLAST of Ca_08142 vs. DB:Swiss
Match: UBA2C_ARATH (UBP1-associated protein 2C OS=Arabidopsis thaliana OX=3702 GN=UBA2C PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 1.855e-58
Identity = 101/221 (45.70%), Postives = 140/221 (63.35%), Query Frame = 1 
Query:  262 QKLLEPFTKDQIASLLCEAASKHRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNSLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPK 924
            +K++E FT DQ+  LL EA  +H DV + +R  AD D + RK+F+ GL  DTT+  L + FS YG++E+   + DKV+GKSKGYGF+ F    GA  ALKEP KKI  R+T  QLA+ G              Q ++ + +KIY++NV  D+   +L   F  +G++EEGPLG DK TGK +GF LFVYK+AE A+ AL +P K  +G  L+C+ A+DG K
Sbjct:   35 RKIIERFTTDQLLDLLQEAIVRHPDVLESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGFVTFMHVDGALLALKEPSKKIDGRVTVTQLAASG--------NQGTGSQIADISMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCKLAVDGKK 247
[Close]
BLAST of Ca_08142 vs. DB:Swiss
Match: UBA1A_ARATH (UBP1-associated proteins 1A OS=Arabidopsis thaliana OX=3702 GN=UBA1A PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 2.849e-39
Identity = 67/137 (48.91%), Postives = 93/137 (67.88%), Query Frame = 1 
Query:  247 DEEPIQKLLEPFTKDQIASLLCEAASKHRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNSL---QPTP 648
            D E +++LL+P++KDQ+  L+C A+     +   + + AD D  HRKIFV+GL W+TT  TL+  F  YGEIE+C  V DK +GK+KG+GF++FK R GA+ ALKEP+K+I NR   CQLAS+GP  +     QP P
Sbjct:   59 DPEELRELLQPYSKDQLVDLVCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRETLVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLASMGPAASGKGHDQPGP 195

HSP 2 Score: 60.8474 bits (146), Expect = 9.914e-9
Identity = 31/84 (36.90%), Postives = 47/84 (55.95%), Query Frame = 1 
Query:  670 EYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGP 921
            + T +KI++  +  +   + L   F  +GEIEE  + +DKATGK KGF   ++K+ + A+ AL+EP K        CQ A  GP
Sbjct:  100 DVTHRKIFVYGLPWETTRETLVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLASMGP 183
[Close]
BLAST of Ca_08142 vs. DB:Swiss
Match: UBA1C_ARATH (UBP1-associated proteins 1C OS=Arabidopsis thaliana OX=3702 GN=UBA1C PE=3 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 3.145e-31
Identity = 60/127 (47.24%), Postives = 83/127 (65.35%), Query Frame = 1 
Query:  241 DEDEEPIQKLLEPFTKDQIASLLCEAASKHRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGP 621
            + D+E I++LL  ++K+++ +L+ + A K   +   I + AD D A R IFV G GWDTT   L  AF  YGEIE+C  V DK +G+ KGYGF++FK R GAR ALK P+K++ NR+  C LAS  P
Sbjct:  361 EHDKEDIKQLLVAYSKEELVNLIYKTAEKGSRLISAILESADRDIAQRNIFVRGFGWDTTQENLKTAFESYGEIEECSVVMDKDTGRGKGYGFVMFKTRKGAREALKRPEKRMYNRIVVCNLASEKP 487

HSP 2 Score: 60.8474 bits (146), Expect = 1.769e-8
Identity = 29/81 (35.80%), Postives = 45/81 (55.56%), Query Frame = 1 
Query:  679 QKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGP 921
            Q+ I++   G D   + L T F  +GEIEE  + +DK TG+ KG+   ++K+ + AR AL+ P K     I+ C  A + P
Sbjct:  407 QRNIFVRGFGWDTTQENLKTAFESYGEIEECSVVMDKDTGRGKGYGFVMFKTRKGAREALKRPEKRMYNRIVVCNLASEKP 487
[Close]
BLAST of Ca_08142 vs. DB:Swiss
Match: UBA1B_ARATH (UBP1-associated proteins 1B OS=Arabidopsis thaliana OX=3702 GN=UBA1B PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.630e-29
Identity = 67/154 (43.51%), Postives = 95/154 (61.69%), Query Frame = 1 
Query:  247 DEEPIQKLLEPFTKDQIASLLCEAASKHRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNSLQPTPQVTPQTSEYTQKKIYISNVG 708
            D+E I+ LLE ++K+++ +L+ + A K   +   + + AD D++ R IFV GLGWDTT   L  AF  YGEI +C  V DK +G++KG+GF+LFK R GAR ALK P+K++ NR  +C  A   P  NS +P  Q  P  S     KI +S+ G
Sbjct:  118 DKEDIKNLLESYSKEELINLIYKTAEKGSKLISAVFESADRDSSQRNIFVRGLGWDTTHENLKAAFEVYGEITECSVVMDKDTGRAKGFGFVLFKTRKGARAALKNPEKRMYNRTVSCLPAR--PF-NSGKPREQQQPVES----VKIDLSHTG 264
[Close]
BLAST of Ca_08142 vs. DB:Swiss
Match: HNRPD_HUMAN (Heterogeneous nuclear ribonucleoprotein D0 OS=Homo sapiens OX=9606 GN=HNRNPD PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.921e-22
Identity = 52/181 (28.73%), Postives = 91/181 (50.28%), Query Frame = 1 
Query:  328 HRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNSLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPH 870
            H + + R  + A       K+F+ GL WDTT   L + FS++GE+ DC    D ++G+S+G+GF+LFK+       + + + K+  ++       I P +     T +          KKI++  + PD   +K+  +F  FGE+E   L +D  T K +GFC   +K  E  ++ +E+ +
Sbjct:   79 HSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKV-------IDPKRAKAMKTKEPV--------KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKY 244
[Close]
BLAST of Ca_08142 vs. DB:Swiss
Match: HNRPD_MOUSE (Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 2.509e-22
Identity = 52/181 (28.73%), Postives = 91/181 (50.28%), Query Frame = 1 
Query:  328 HRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNSLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPH 870
            H + + R  + A       K+F+ GL WDTT   L + FS++GE+ DC    D ++G+S+G+GF+LFK+       + + + K+  ++       I P +     T +          KKI++  + PD   +K+  +F  FGE+E   L +D  T K +GFC   +K  E  ++ +E+ +
Sbjct:   79 HSNSSPRHTEAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKV-------IDPKRAKAMKTKEPV--------KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKY 244
[Close]
BLAST of Ca_08142 vs. DB:Swiss
Match: HNRPD_RAT (Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 9.709e-22
Identity = 52/186 (27.96%), Postives = 92/186 (49.46%), Query Frame = 1 
Query:  313 EAASKHRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNSLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPH 870
            E    H + + R  + A       K+F+ GL WDTT   L + FS++G++ DC    D ++G+S+G+GF+LFK+       + + + K+  ++       I P +     T +          KKI++  + PD   +K+  +F  FGE+E   L +D  T K +GFC   +K  E  ++ +E+ +
Sbjct:   72 EEDEGHSNSSPRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKV-------IDPKRAKAMKTKEPV--------KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKY 242
[Close]
BLAST of Ca_08142 vs. DB:Swiss
Match: HRP1_YEAST (Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HRP1 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.156e-21
Identity = 57/186 (30.65%), Postives = 92/186 (49.46%), Query Frame = 1 
Query:  352 RKIADGDAAHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQNSLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKA 909
            R  AD      K+F+ GL WDTT   L   F +YG + D K + D  +G+S+G+GF+ F+K S     +K             Q    G V   + P  +  P+  +    KI++  +GPD+ P++   FFS++G I +  L LDK TG+ +GF    Y SA++  R  +    +F+   +  ++A
Sbjct:  149 RSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVK------------TQHILDGKV---IDPK-RAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRA 318
The following BLAST results are available for this feature:
BLAST of Ca_08142 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
HNRPD_HUMAN1.506e-2128.73Heterogeneous nuclear ribonucleoprotein D0 OS=Homo... [more]
HNRPD_MOUSE1.967e-2128.73Heterogeneous nuclear ribonucleoprotein D0 OS=Mus ... [more]
HNRPD_RAT3.356e-2128.18Heterogeneous nuclear ribonucleoprotein D0 OS=Ratt... [more]
HNRDL_CHICK3.141e-1928.57Heterogeneous nuclear ribonucleoprotein D-like OS=... [more]
HNRDL_RAT5.358e-1928.57Heterogeneous nuclear ribonucleoprotein D-like OS=... [more]
HNRDL_MOUSE5.358e-1928.57Heterogeneous nuclear ribonucleoprotein D-like OS=... [more]
HNRDL_HUMAN5.358e-1928.57Heterogeneous nuclear ribonucleoprotein D-like OS=... [more]
HRP1_YEAST1.194e-1830.11Nuclear polyadenylated RNA-binding protein 4 OS=Sa... [more]
HNDLB_XENLA2.036e-1827.41Heterogeneous nuclear ribonucleoprotein D-like-B O... [more]
ROAA_MOUSE2.659e-1828.57Heterogeneous nuclear ribonucleoprotein A/B OS=Mus... [more]

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BLAST of Ca_08142 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
Q2PEU9_TRIPR1.142e-15169.57Putative uncharacterized protein (Fragment) OS=Tri... [more]
Q2PET5_TRIPR1.142e-15169.57Putative uncharacterized protein (Fragment) OS=Tri... [more]
Q8LLE6_VICFA5.138e-14467.78RNA-binding protein AKIP1 OS=Vicia faba PE=2 SV=1[more]
Q2HUH7_MEDTR4.809e-14267.79RNA-binding region RNP-1 (RNA recognition motif) O... [more]
G7L3S2_MEDTR3.117e-14170.03RNA-binding protein OS=Medicago truncatula GN=MTR_... [more]
G7L3S1_MEDTR3.364e-13771.08RNA-binding protein OS=Medicago truncatula GN=MTR_... [more]
K7MY09_SOYBN6.977e-12559.62Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I1JMX0_SOYBN3.241e-12259.62Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
B9HDH2_POPTR2.328e-11255.37Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9S7Y1_RICCO1.277e-11059.06Heterogeneous nuclear ribonucleoprotein A1, putati... [more]

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BLAST of Ca_08142 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
UBA2A_ARATH2.937e-12658.93UBP1-associated protein 2A OS=Arabidopsis thaliana... [more]
UBA2B_ARATH6.942e-12256.45UBP1-associated protein 2B OS=Arabidopsis thaliana... [more]
UBA2C_ARATH1.855e-5845.70UBP1-associated protein 2C OS=Arabidopsis thaliana... [more]
UBA1A_ARATH2.849e-3948.91UBP1-associated proteins 1A OS=Arabidopsis thalian... [more]
UBA1C_ARATH3.145e-3147.24UBP1-associated proteins 1C OS=Arabidopsis thalian... [more]
UBA1B_ARATH1.630e-2943.51UBP1-associated proteins 1B OS=Arabidopsis thalian... [more]
HNRPD_HUMAN1.921e-2228.73Heterogeneous nuclear ribonucleoprotein D0 OS=Homo... [more]
HNRPD_MOUSE2.509e-2228.73Heterogeneous nuclear ribonucleoprotein D0 OS=Mus ... [more]
HNRPD_RAT9.709e-2227.96Heterogeneous nuclear ribonucleoprotein D0 OS=Ratt... [more]
HRP1_YEAST6.156e-2130.65Nuclear polyadenylated RNA-binding protein 4 OS=Sa... [more]
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 130..196
score: 1.3e-15coord: 230..298
score: 6.5
IPR000504RNA recognition motif domainSMARTSM00360RNA recognition motifcoord: 129..201
score: 4.1e-20coord: 229..301
score: 1.5
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 128..205
score: 14.044coord: 228..317
score: 13
IPR012677Nucleotide-binding, alpha-beta plaitGENE3D3.30.70.330no descriptioncoord: 126..203
score: 1.7e-19coord: 209..306
score: 2.8
NoneNo IPR availableCOILcoilcoiled-coilcoord: 37..75
score
NoneNo IPR availablePANTHERPTHR24011FAMILY NOT NAMEDcoord: 15..485
score: 2.5e
NoneNo IPR availablePANTHERPTHR24011:SF5SUBFAMILY NOT NAMEDcoord: 15..485
score: 2.5e
NoneNo IPR availableSEGsegsegcoord: 16..79
score: NAcoord: 313..321
score: NAcoord: 346..363
score: NAcoord: 374..394
score: NAcoord: 409..426
score: NAcoord: 469..483
score
NoneNo IPR availableSUPERFAMILY54928RNA-binding domain, RBDcoord: 127..307
score: 1.1
NoneNo IPR availableSEGsegsegcoord: 4..27
score
NoneNo IPR availableSEGsegsegcoord: 4..9
score
NoneNo IPR availableSEGsegsegcoord: 6..20
score: NAcoord: 30..50
score: NAcoord: 60..78
score
NoneNo IPR availableSEGsegsegcoord: 2..53
score
NoneNo IPR availableSEGsegsegcoord: 2..16
score: NAcoord: 18..37
score: NAcoord: 39..47
score
NoneNo IPR availableSEGsegsegcoord: 8..58
score: NAcoord: 62..73
score
NoneNo IPR availableSEGsegsegcoord: 41..55
score
NoneNo IPR availableSEGsegsegcoord: 3..50
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_08142_v1.0_kabuli ID=Ca_08142_v1.0_kabuli; Name=Ca_08142; organism=Cicer arietinum; type=mRNA; length=1473bp
ATGGTGAAGAAGCGAAAACTCCCAGCTAAATCTTCTCAACCAGCAGAGGA
ACCCCCACTCAAGCAGCATCAACCGGAGCCGGAGCTAGAACCGGAACCAT
ACATCCCCGCCGAAGAATACGAAGAAGTCGAAGAAGAAGTTGAGGAAGAA
TACGAAGAAGTAGAGGAGGAAGAGGAGGAAGAAGAAGAAGAGGAGGAGGA
GGAGGAAGAAGAAGAACAACCTCAAGGAGTCGAATACCAAGACGAAGACG
AAGAACCAATCCAGAAGCTTCTAGAACCTTTCACTAAAGACCAGATCGCG
AGTCTTCTTTGCGAGGCGGCTTCTAAACACCGTGACGTGGCTGATCGGAT
CCGCAAAATTGCCGATGGAGACGCGGCGCACAGGAAAATCTTCGTTCACG
GTTTAGGATGGGACACCACCTCCGCAACCCTAATCAATGCATTTTCGCAA
TACGGTGAAATCGAAGACTGTAAAGCGGTTACTGACAAAGTTTCCGGTAA
ATCCAAGGGTTACGGTTTCATCCTCTTTAAGAAACGAAGCGGAGCGCGAA
ACGCGTTGAAGGAGCCTCAGAAGAAGATCGGTAACCGTATGACGGCGTGC
CAGCTGGCATCCATAGGTCCCGTGCAGAATTCTCTGCAACCTACGCCGCA
GGTTACGCCGCAAACGTCTGAGTATACGCAGAAGAAGATCTATATCAGTA
ATGTTGGCCCCGATCTTGATCCTCAGAAGCTTTTCACGTTTTTTTCGCGG
TTTGGAGAGATTGAGGAAGGGCCGTTAGGGCTTGACAAGGCAACGGGAAA
ACCGAAAGGGTTCTGTTTGTTTGTTTACAAGAGCGCTGAGAGTGCGAGGA
GGGCGTTGGAGGAGCCTCATAAGGAATTCGAGGGACATATTTTGCACTGC
CAGAAGGCAATTGATGGACCTAAGGTGGTGAAAACACATCATCAACAACA
ACAGCAACAACACGTGAATTCATTGAATCCGTTGAATCATCTGAATCAAT
TGACTCAGAGGACGCAATATCAGAGAAATGACAATGCTGGATTTGTTGTT
GGTGGTGGTGGAAGTAGTGTTGCAGTTAGCCAACAAGGACATTTAATGGC
GCCGGCAGGACAAGGACAGGCGGTTGGGTACAATCAGGCTGCTACTGCCG
CAGCAGCGCAGGGCCTGAACCCTGCGCTGACTCCGGCGCTTGGACAGGCT
TTGACGGCCCTGCTAGCTTCTCAGGGTGCTACTTTGGGATTGACTAATTT
GTTGGGGAGCCTTGGAACGAGTACTGCGGTTAATCCAGGTGTTCCTACTG
CGGGACACGGAGTTCAGAGTGGATACAGTGCTCAGCCTGGTATAAATCCA
AGTGTTATGGGAGGAGCATATGGGAGTTCAGTGCCGCAGGTGCAATATCC
GAACCAGCAGGTTGGACAGGGTGGTTCTGGAAGAGGGCAATATGGTGGTG
CTGCACCTTACATGGGGCACTAG
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protein sequence of Ca_08142_v1.0_kabuli

>Ca_08142_v1.0_kabuli ID=Ca_08142_v1.0_kabuli; Name=Ca_08142_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=490bp
MVKKRKLPAKSSQPAEEPPLKQHQPEPELEPEPYIPAEEYEEVEEEVEEE
YEEVEEEEEEEEEEEEEEEEEEQPQGVEYQDEDEEPIQKLLEPFTKDQIA
SLLCEAASKHRDVADRIRKIADGDAAHRKIFVHGLGWDTTSATLINAFSQ
YGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTAC
QLASIGPVQNSLQPTPQVTPQTSEYTQKKIYISNVGPDLDPQKLFTFFSR
FGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHC
QKAIDGPKVVKTHHQQQQQQHVNSLNPLNHLNQLTQRTQYQRNDNAGFVV
GGGGSSVAVSQQGHLMAPAGQGQAVGYNQAATAAAAQGLNPALTPALGQA
LTALLASQGATLGLTNLLGSLGTSTAVNPGVPTAGHGVQSGYSAQPGINP
SVMGGAYGSSVPQVQYPNQQVGQGGSGRGQYGGAAPYMGH
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mRNA from alignment at Ca3:27654552..27656024-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_08142_v1.0_kabuli ID=Ca_08142_v1.0_kabuli; Name=Ca_08142; organism=Cicer arietinum; type=mRNA; length=1473bp; location=Sequence derived from: Ca3:27654552..27656024- (Cicer arietinum
ATGGTGAAGAAGCGAAAACTCCCAGCTAAATCTTCTCAACCAGCAGAGGA
ACCCCCACTCAAGCAGCATCAACCGGAGCCGGAGCTAGAACCGGAACCAT
ACATCCCCGCCGAAGAATACGAAGAAGTCGAAGAAGAAGTTGAGGAAGAA
TACGAAGAAGTAGAGGAGGAAGAGGAGGAAGAAGAAGAAGAGGAGGAGGA
GGAGGAAGAAGAAGAACAACCTCAAGGAGTCGAATACCAAGACGAAGACG
AAGAACCAATCCAGAAGCTTCTAGAACCTTTCACTAAAGACCAGATCGCG
AGTCTTCTTTGCGAGGCGGCTTCTAAACACCGTGACGTGGCTGATCGGAT
CCGCAAAATTGCCGATGGAGACGCGGCGCACAGGAAAATCTTCGTTCACG
GTTTAGGATGGGACACCACCTCCGCAACCCTAATCAATGCATTTTCGCAA
TACGGTGAAATCGAAGACTGTAAAGCGGTTACTGACAAAGTTTCCGGTAA
ATCCAAGGGTTACGGTTTCATCCTCTTTAAGAAACGAAGCGGAGCGCGAA
ACGCGTTGAAGGAGCCTCAGAAGAAGATCGGTAACCGTATGACGGCGTGC
CAGCTGGCATCCATAGGTCCCGTGCAGAATTCTCTGCAACCTACGCCGCA
GGTTACGCCGCAAACGTCTGAGTATACGCAGAAGAAGATCTATATCAGTA
ATGTTGGCCCCGATCTTGATCCTCAGAAGCTTTTCACGTTTTTTTCGCGG
TTTGGAGAGATTGAGGAAGGGCCGTTAGGGCTTGACAAGGCAACGGGAAA
ACCGAAAGGGTTCTGTTTGTTTGTTTACAAGAGCGCTGAGAGTGCGAGGA
GGGCGTTGGAGGAGCCTCATAAGGAATTCGAGGGACATATTTTGCACTGC
CAGAAGGCAATTGATGGACCTAAGGTGGTGAAAACACATCATCAACAACA
ACAGCAACAACACGTGAATTCATTGAATCCGTTGAATCATCTGAATCAAT
TGACTCAGAGGACGCAATATCAGAGAAATGACAATGCTGGATTTGTTGTT
GGTGGTGGTGGAAGTAGTGTTGCAGTTAGCCAACAAGGACATTTAATGGC
GCCGGCAGGACAAGGACAGGCGGTTGGGTACAATCAGGCTGCTACTGCCG
CAGCAGCGCAGGGCCTGAACCCTGCGCTGACTCCGGCGCTTGGACAGGCT
TTGACGGCCCTGCTAGCTTCTCAGGGTGCTACTTTGGGATTGACTAATTT
GTTGGGGAGCCTTGGAACGAGTACTGCGGTTAATCCAGGTGTTCCTACTG
CGGGACACGGAGTTCAGAGTGGATACAGTGCTCAGCCTGGTATAAATCCA
AGTGTTATGGGAGGAGCATATGGGAGTTCAGTGCCGCAGGTGCAATATCC
GAACCAGCAGGTTGGACAGGGTGGTTCTGGAAGAGGGCAATATGGTGGTG
CTGCACCTTACATGGGGCACTAG
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Coding sequence (CDS) from alignment at Ca3:27654552..27656024-

>Ca_08142_v1.0_kabuli ID=Ca_08142_v1.0_kabuli; Name=Ca_08142; organism=Cicer arietinum; type=CDS; length=1473bp; location=Sequence derived from: Ca3:27654552..27656024- (Cicer arietinum
ATGGTGAAGAAGCGAAAACTCCCAGCTAAATCTTCTCAACCAGCAGAGGA
ACCCCCACTCAAGCAGCATCAACCGGAGCCGGAGCTAGAACCGGAACCAT
ACATCCCCGCCGAAGAATACGAAGAAGTCGAAGAAGAAGTTGAGGAAGAA
TACGAAGAAGTAGAGGAGGAAGAGGAGGAAGAAGAAGAAGAGGAGGAGGA
GGAGGAAGAAGAAGAACAACCTCAAGGAGTCGAATACCAAGACGAAGACG
AAGAACCAATCCAGAAGCTTCTAGAACCTTTCACTAAAGACCAGATCGCG
AGTCTTCTTTGCGAGGCGGCTTCTAAACACCGTGACGTGGCTGATCGGAT
CCGCAAAATTGCCGATGGAGACGCGGCGCACAGGAAAATCTTCGTTCACG
GTTTAGGATGGGACACCACCTCCGCAACCCTAATCAATGCATTTTCGCAA
TACGGTGAAATCGAAGACTGTAAAGCGGTTACTGACAAAGTTTCCGGTAA
ATCCAAGGGTTACGGTTTCATCCTCTTTAAGAAACGAAGCGGAGCGCGAA
ACGCGTTGAAGGAGCCTCAGAAGAAGATCGGTAACCGTATGACGGCGTGC
CAGCTGGCATCCATAGGTCCCGTGCAGAATTCTCTGCAACCTACGCCGCA
GGTTACGCCGCAAACGTCTGAGTATACGCAGAAGAAGATCTATATCAGTA
ATGTTGGCCCCGATCTTGATCCTCAGAAGCTTTTCACGTTTTTTTCGCGG
TTTGGAGAGATTGAGGAAGGGCCGTTAGGGCTTGACAAGGCAACGGGAAA
ACCGAAAGGGTTCTGTTTGTTTGTTTACAAGAGCGCTGAGAGTGCGAGGA
GGGCGTTGGAGGAGCCTCATAAGGAATTCGAGGGACATATTTTGCACTGC
CAGAAGGCAATTGATGGACCTAAGGTGGTGAAAACACATCATCAACAACA
ACAGCAACAACACGTGAATTCATTGAATCCGTTGAATCATCTGAATCAAT
TGACTCAGAGGACGCAATATCAGAGAAATGACAATGCTGGATTTGTTGTT
GGTGGTGGTGGAAGTAGTGTTGCAGTTAGCCAACAAGGACATTTAATGGC
GCCGGCAGGACAAGGACAGGCGGTTGGGTACAATCAGGCTGCTACTGCCG
CAGCAGCGCAGGGCCTGAACCCTGCGCTGACTCCGGCGCTTGGACAGGCT
TTGACGGCCCTGCTAGCTTCTCAGGGTGCTACTTTGGGATTGACTAATTT
GTTGGGGAGCCTTGGAACGAGTACTGCGGTTAATCCAGGTGTTCCTACTG
CGGGACACGGAGTTCAGAGTGGATACAGTGCTCAGCCTGGTATAAATCCA
AGTGTTATGGGAGGAGCATATGGGAGTTCAGTGCCGCAGGTGCAATATCC
GAACCAGCAGGTTGGACAGGGTGGTTCTGGAAGAGGGCAATATGGTGGTG
CTGCACCTTACATGGGGCACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: KEGG ORTHOLOGY
TermDefinition
K12741HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
Vocabulary: KEGG PATHWAY
TermDefinition
ko03020RNA polymerase
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding