Ca_09396, Ca_09396_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_09396
Unique NameCa_09396_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length489
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca3chromosomeCa3:19939002..19939490 -Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR197Pisum sativum Cameor genome v1aPisum sativum
capsR244Pisum sativum Cameor genome v1aPisum sativum
cavuR170Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR194Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR262Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ancaL0153Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0227Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0274Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0625Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1040Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1187Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1188Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL324Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL479Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL729Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR172Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR217Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR196Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR226Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR241Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR228Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR244Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR219Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR162Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR182Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR081Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL179Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL453Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL459Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL731Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR183Cicer arietinum
cacarR216Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Psat03G0411200-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
LR48_mrnaVigan11g107000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Phvul.008G095100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_014656309.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Tiffany.R1.5g042040.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Hedin2.R1.5g050600.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat3g125640.1Pisum sativum Cameor genome v1aPisum sativum
jg6045.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr05.860Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Va03G026810.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun05g097500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.model.Chr10.774Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Va11G042450.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_12160Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun10g084300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_027332557.1Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_09396-CDS1Ca_09396-CDS1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_09396_v1.0_kabuliCa_09396_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_09396 vs. SwissProt
Match: BH140_ARATH (Transcription factor bHLH140 OS=Arabidopsis thaliana GN=BHLH140 PE=4 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.141e-24
Identity = 53/64 (82.81%), Postives = 59/64 (92.19%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMINFVDD 318
            TDPQSVAAR+RRHRISDRFKILQSMVPGG+KMDTVSML+EAI YVKFLK QIW HQ M+ F++D
Sbjct:   45 TDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFLKAQIWYHQNMLLFIND 108
[Close]
BLAST of Ca_09396 vs. SwissProt
Match: LAX_ORYSJ (Transcription factor LAX PANICLE OS=Oryza sativa subsp. japonica GN=LAX PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 6.925e-22
Identity = 48/59 (81.36%), Postives = 55/59 (93.22%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMI 303
            TDPQSVAARERRHRISDRF++L+S+VPGGSKMDTVSMLE+AIHYVKFLK Q+ LHQ  +
Sbjct:   42 TDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQAAL 100
[Close]
BLAST of Ca_09396 vs. SwissProt
Match: HEC2_ARATH (Transcription factor HEC2 OS=Arabidopsis thaliana GN=HEC2 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.416e-16
Identity = 39/51 (76.47%), Postives = 45/51 (88.24%), Query Frame = 1 
Query:  130 DPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQI 282
            DPQSVAAR RR RIS+R +ILQ +VPGG+KMDT SML+EAIHYVKFLK Q+
Sbjct:  128 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQV 178
[Close]
BLAST of Ca_09396 vs. SwissProt
Match: HEC1_ARATH (Transcription factor HEC1 OS=Arabidopsis thaliana GN=HEC1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.416e-16
Identity = 39/51 (76.47%), Postives = 45/51 (88.24%), Query Frame = 1 
Query:  130 DPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQI 282
            DPQSVAAR RR RIS+R +ILQ +VPGG+KMDT SML+EAIHYVKFLK Q+
Sbjct:  131 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQV 181
[Close]
BLAST of Ca_09396 vs. SwissProt
Match: HEC3_ARATH (Transcription factor HEC3 OS=Arabidopsis thaliana GN=HEC3 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 3.680e-15
Identity = 40/53 (75.47%), Postives = 45/53 (84.91%), Query Frame = 1 
Query:  130 DPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWL 288
            DPQSVAAR RR RIS+R +ILQ +VPGG+KMDT SML+EAI YVKFLK QI L
Sbjct:  128 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRL 180
[Close]
BLAST of Ca_09396 vs. SwissProt
Match: BH087_ARATH (Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.399e-14
Identity = 45/94 (47.87%), Postives = 62/94 (65.96%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQI--------WLHQTMINFVDDDHMFIPQEHNNFHSLDQHINPN 384
            TDPQ+VAAR+RR RIS++ ++LQ++VPGG+KMDT SML+EA +Y+KFL+ Q+         L QT ++F      F P  H +F  L    NPN
Sbjct:  277 TDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAPTSF-PLFHPSFLPLQ---NPN 366
[Close]
BLAST of Ca_09396 vs. SwissProt
Match: BH139_ARATH (Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139 PE=4 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.941e-14
Identity = 39/77 (50.65%), Postives = 54/77 (70.13%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMINFVDDDHMFIPQEHNNFH 357
            +DPQS+ AR+RR RI+DR K LQS+VP G+K+D  +MLE+A+HYVKFL+ QI L  +     +D  M+ P  HN  +
Sbjct:  140 SDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSS-----EDLWMYAPLAHNGLN 211
[Close]
BLAST of Ca_09396 vs. SwissProt
Match: BH085_ARATH (Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.638e-13
Identity = 39/74 (52.70%), Postives = 53/74 (71.62%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMINFVDDDHMFIPQEHN 348
            TDPQS+ AR+RR RI++R +ILQ++VP G+K+D  +MLEEA+HYVKFL+ QI L  +     DD  M+ P   N
Sbjct:  274 TDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS-----DDLWMYAPIAFN 342
[Close]
BLAST of Ca_09396 vs. SwissProt
Match: BH054_ARATH (Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.445e-13
Identity = 38/74 (51.35%), Postives = 53/74 (71.62%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMINFVDDDHMFIPQEHN 348
            TDPQS+ AR+RR +I++R K LQ++VP G+K+D  +MLEEA+HYVKFL+ QI L  +     DD  M+ P  +N
Sbjct:  175 TDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS-----DDLWMYAPLAYN 243
[Close]
BLAST of Ca_09396 vs. SwissProt
Match: IND_ARATH (Transcription factor IND OS=Arabidopsis thaliana GN=IND PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 7.674e-13
Identity = 34/55 (61.82%), Postives = 44/55 (80.00%), Query Frame = 1 
Query:  130 DPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQ 294
            DPQ+V AR RR RIS++ +IL+ +VPGG+KMDT SML+EAI Y KFLK Q+ + Q
Sbjct:  121 DPQTVVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175
[Close]
BLAST of Ca_09396 vs. TrEMBL
Match: G7KSC0_MEDTR (LAX OS=Medicago truncatula GN=MTR_7g069590 PE=4 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 8.811e-39
Identity = 84/120 (70.00%), Postives = 100/120 (83.33%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMINFVDD---DHMFIPQEHNNFHSLDQHINPNSSSIEPLDTLPQLPLEQFCFQGEEENKFIFN 477
            TDPQSVAARERRHRISDRFKILQSM+PGGSK+DTVSMLEEAIHYVKFLK QIWLH+T+INFVDD    HM +PQ+++   S D++I   S + E +  LPQLPLEQFCFQG+++ K IF+
Sbjct:   34 TDPQSVAARERRHRISDRFKILQSMIPGGSKLDTVSMLEEAIHYVKFLKKQIWLHETLINFVDDIGESHMLLPQDYS---SNDKNI--PSGTFESMQNLPQLPLEQFCFQGDKDIKTIFD 148
[Close]
BLAST of Ca_09396 vs. TrEMBL
Match: I1KG08_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 2.400e-36
Identity = 88/131 (67.18%), Postives = 97/131 (74.05%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMINFVDDDH----MFIPQEHNNF---HSLDQHINPNSS----SIEPLDTLPQLPLEQFCFQGEEENKFIFNMPL 486
            TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLE AIHYVKFLKTQI LHQ +I+FVD DH    +F+P E+NNF   HS+    NP+SS    S     +LPQLPL Q  FQGEE+      MPL
Sbjct:   46 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEGAIHYVKFLKTQILLHQALIDFVDVDHHESPLFLPSEYNNFPDEHSISLQQNPSSSVSVHSHHNQQSLPQLPLAQCYFQGEEDFNTFDAMPL 176
[Close]
BLAST of Ca_09396 vs. TrEMBL
Match: K7L1X0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 6.535e-34
Identity = 85/131 (64.89%), Postives = 97/131 (74.05%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMINFVDDDH----MFIPQEHNNFHSLDQHI----NPNSSSIEP---LDTLPQLPLEQFCFQGEEE-NKFIFNMP 483
            TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLE AIHYVKFL+T+I LHQ +I+FVD DH    +F+P E+NNF     +I    NP+S S+       +LPQLPL Q  FQGEE+ N F   MP
Sbjct:   45 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLECAIHYVKFLQTEILLHQALIDFVDVDHHESPLFLPAEYNNFPDEHSNISLQQNPSSVSVHSHHHQQSLPQLPLSQCYFQGEEDFNTFDAIMP 175
[Close]
BLAST of Ca_09396 vs. TrEMBL
Match: A5BMK9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0058g00110 PE=4 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.043e-31
Identity = 73/113 (64.60%), Postives = 86/113 (76.11%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMINFVDDDHMFIPQEHN-NFHSLDQHINPNS--SSIEPLDTLPQLPLEQFCFQGEE 456
            TDPQSVAARERRHRISDRFKILQS+VPGG+KMDTVSMLEEAIHYVK+LKTQIWLHQTMINFVDDD   + Q  +   H  +   +P+   + ++P  T      + +CFQGEE
Sbjct:   38 TDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEEAIHYVKYLKTQIWLHQTMINFVDDDPSLLYQSDSLPSHQQEAFYSPDETLAMMQPYITTTAPVRDSYCFQGEE 150
[Close]
BLAST of Ca_09396 vs. TrEMBL
Match: M5W2M5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025490mg PE=4 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 5.725e-30
Identity = 75/119 (63.03%), Postives = 87/119 (73.11%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMINFVDDD---------HMFIPQEHNNFHSLDQHINPNSSSIEPLDTLPQLPLEQFCFQGEE 456
            TDPQSVAARERRHRISDRFKILQS+VPGG+KMDTVSMLEEAIHYVKFLK QIWLHQ+MINFVDDD         H+  P   ++F+S +  + P S    P   +P LP   + FQG+E
Sbjct:   45 TDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEEAIHYVKFLKAQIWLHQSMINFVDDDDGLHHDPDHHLHHPTGSHDFYSQNNFVQPPS----PAMNIP-LPDPNY-FQGQE 157
[Close]
BLAST of Ca_09396 vs. TrEMBL
Match: K7KCZ5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 5.725e-30
Identity = 80/134 (59.70%), Postives = 90/134 (67.16%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMINFVDDDH-------------------MFIPQEHNNFHSLDQHINPNSSSIEPLDTLPQLPLEQFC-FQGEEENKF 468
            TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAI YVKFLKTQIWLHQTMINF+D+D+                    + P EH  F S  Q+   + S+++ L  L   PL   C FQGE+ N F
Sbjct:   44 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIQYVKFLKTQIWLHQTMINFMDNDNYNINDNNESSSLLYPNNDCCYFPSEH--FVSPQQNATFDYSNMQDLQHLQ--PLAAQCGFQGEDSNYF 173
[Close]
BLAST of Ca_09396 vs. TrEMBL
Match: K7K3F3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 9.140e-28
Identity = 73/109 (66.97%), Postives = 79/109 (72.48%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMINFVDDDHMFIPQEHNNFHSLDQHINPNSSSIEPL-----DTLPQLPLEQF 438
            TD QSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAI YVKFLKTQIWLHQTMINF+D+D+      +NN+ S       +SS   PL     D     P EQF
Sbjct:   42 TDQQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIQYVKFLKTQIWLHQTMINFMDNDN----NNNNNYES-------SSSLPSPLLHPNRDNCYYFPSEQF 139
[Close]
BLAST of Ca_09396 vs. TrEMBL
Match: K4CPZ7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc09g005070.1 PE=4 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 9.140e-28
Identity = 71/121 (58.68%), Postives = 85/121 (70.25%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMINFVDDDHMFIPQEHNNFHSL---DQHINPNSSSIEPLDTLPQL------PLEQFCFQGEEEN 462
            TDPQS+AARERRHRISDRFKILQS+VPGGSKMDTV+MLEEAIHYVKFLKTQIWLHQTM+N VD +H  +      ++ L   DQ+I+ N+ S      + Q+        +Q  F  EE N
Sbjct:   23 TDPQSIAARERRHRISDRFKILQSLVPGGSKMDTVTMLEEAIHYVKFLKTQIWLHQTMVNLVDINHEMV-----GYYPLVDDDQNIHKNNISSMDYQQMQQVQSYDNDAFQQVEFPFEETN 138
[Close]
BLAST of Ca_09396 vs. TrEMBL
Match: B9NI62_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_674749 PE=4 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.906e-25
Identity = 66/103 (64.08%), Postives = 75/103 (72.82%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMINFVDDDHMFIPQEHNNFHSLDQHINPNSSSIEPLDTLPQLPLEQ 435
            TDPQSVAARERRHRISDRFKILQS+VPGG+KMDTVSMLEEAI+YVKFLKTQ+ LHQT++NFVDD+            SLD ++        P D    LP EQ
Sbjct:   39 TDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEEAINYVKFLKTQVLLHQTIMNFVDDE-----------RSLDHYL--------PADYSTALPTEQ 122
[Close]
BLAST of Ca_09396 vs. TrEMBL
Match: B9HCY8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_762524 PE=4 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 9.458e-25
Identity = 62/90 (68.89%), Postives = 71/90 (78.89%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMINFVDDDHMFIPQEHNNFHSLDQHINPNSSSI 396
            TDPQSVAARERRHRISDRFKILQS+VPGG+KMDTVSMLEEAI+YVKFLK QI LHQT++N VDD+            SLD H+   S+S+
Sbjct:   39 TDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEEAINYVKFLKNQILLHQTIMNSVDDE-----------RSLDYHLPAGSASL 117
[Close]
BLAST of Ca_09396 vs. DB:Swiss
Match: BH140_ARATH (Transcription factor bHLH140 OS=Arabidopsis thaliana OX=3702 GN=BHLH140 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.828e-30
Identity = 53/64 (82.81%), Postives = 59/64 (92.19%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMINFVDD 318
            TDPQSVAAR+RRHRISDRFKILQSMVPGG+KMDTVSML+EAI YVKFLK QIW HQ M+ F++D
Sbjct:   45 TDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFLKAQIWYHQNMLLFIND 108
[Close]
BLAST of Ca_09396 vs. DB:Swiss
Match: LAX1_ORYSJ (Transcription factor LAX PANICLE 1 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.452e-28
Identity = 48/59 (81.36%), Postives = 55/59 (93.22%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMI 303
            TDPQSVAARERRHRISDRF++L+S+VPGGSKMDTVSMLE+AIHYVKFLK Q+ LHQ  +
Sbjct:   42 TDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQAAL 100
[Close]
BLAST of Ca_09396 vs. DB:Swiss
Match: BH139_ARATH (Transcription factor bHLH139 OS=Arabidopsis thaliana OX=3702 GN=BHLH139 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.540e-18
Identity = 39/77 (50.65%), Postives = 54/77 (70.13%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMINFVDDDHMFIPQEHNNFH 357
            +DPQS+ AR+RR RI+DR K LQS+VP G+K+D  +MLE+A+HYVKFL+ QI L  +     +D  M+ P  HN  +
Sbjct:  140 SDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSS-----EDLWMYAPLAHNGLN 211
[Close]
BLAST of Ca_09396 vs. DB:Swiss
Match: BH087_ARATH (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 8.121e-18
Identity = 33/52 (63.46%), Postives = 47/52 (90.38%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQI 282
            TDPQ+VAAR+RR RIS++ ++LQ++VPGG+KMDT SML+EA +Y+KFL+ Q+
Sbjct:  277 TDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQV 328
[Close]
BLAST of Ca_09396 vs. DB:Swiss
Match: LF_ORYSJ (Transcription factor LATE FLOWERING OS=Oryza sativa subsp. japonica OX=39947 GN=LF PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.814e-17
Identity = 34/57 (59.65%), Postives = 47/57 (82.46%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQT 297
            +DPQ+VAAR RR R+S+R ++LQ +VPGGSKMDT +ML+EA  Y+KFLK+Q+   +T
Sbjct:  305 SDPQTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALET 361
[Close]
BLAST of Ca_09396 vs. DB:Swiss
Match: BH054_ARATH (Transcription factor bHLH54 OS=Arabidopsis thaliana OX=3702 GN=BHLH54 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.815e-17
Identity = 38/76 (50.00%), Postives = 53/76 (69.74%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMINFVDDDHMFIPQEHNNF 354
            TDPQS+ AR+RR +I++R K LQ++VP G+K+D  +MLEEA+HYVKFL+ QI L  +     DD  M+ P  +N  
Sbjct:  175 TDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS-----DDLWMYAPLAYNGL 245
[Close]
BLAST of Ca_09396 vs. DB:Swiss
Match: IND_ARATH (Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 6.756e-17
Identity = 34/55 (61.82%), Postives = 44/55 (80.00%), Query Frame = 1 
Query:  130 DPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQ 294
            DPQ+V AR RR RIS++ +IL+ +VPGG+KMDT SML+EAI Y KFLK Q+ + Q
Sbjct:  121 DPQTVVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175
[Close]
BLAST of Ca_09396 vs. DB:Swiss
Match: BH085_ARATH (Transcription factor bHLH85 OS=Arabidopsis thaliana OX=3702 GN=BHLH85 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 6.920e-17
Identity = 38/70 (54.29%), Postives = 52/70 (74.29%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMINFVDDDHMFIP 336
            TDPQS+ AR+RR RI++R +ILQ++VP G+K+D  +MLEEA+HYVKFL+ QI L  +     DD  M+ P
Sbjct:  274 TDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS-----DDLWMYAP 338
[Close]
BLAST of Ca_09396 vs. DB:Swiss
Match: BH084_ARATH (Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.815e-16
Identity = 41/86 (47.67%), Postives = 56/86 (65.12%), Query Frame = 1 
Query:  127 TDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMINFVDDDHMFIPQEHNNFH-SLDQHINP 381
            TDPQS+ AR+RR RI++R +ILQ +VP G+K+D  +MLEEA+ YVKFL+ QI L  +     DD  M+ P  +N     LD  +N 
Sbjct:  245 TDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSS-----DDLWMYAPIAYNGMDIGLDLKLNA 325
[Close]
BLAST of Ca_09396 vs. DB:Swiss
Match: BH086_ARATH (Putative transcription factor bHLH086 OS=Arabidopsis thaliana OX=3702 GN=BHLH86 PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 1.660e-15
Identity = 32/51 (62.75%), Postives = 43/51 (84.31%), Query Frame = 1 
Query:  130 DPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQI 282
            DPQS+AA+ RR RIS+R K+LQ +VP G+K+D V+MLE+AI YVKFL+ Q+
Sbjct:  210 DPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQV 260
The following BLAST results are available for this feature:
BLAST of Ca_09396 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 21
Match NameE-valueIdentityDescription
BH140_ARATH1.141e-2482.81Transcription factor bHLH140 OS=Arabidopsis thalia... [more]
LAX_ORYSJ6.925e-2281.36Transcription factor LAX PANICLE OS=Oryza sativa s... [more]
HEC2_ARATH7.416e-1676.47Transcription factor HEC2 OS=Arabidopsis thaliana ... [more]
HEC1_ARATH7.416e-1676.47Transcription factor HEC1 OS=Arabidopsis thaliana ... [more]
HEC3_ARATH3.680e-1575.47Transcription factor HEC3 OS=Arabidopsis thaliana ... [more]
BH087_ARATH1.399e-1447.87Transcription factor bHLH87 OS=Arabidopsis thalian... [more]
BH139_ARATH6.941e-1450.65Transcription factor bHLH139 OS=Arabidopsis thalia... [more]
BH085_ARATH2.638e-1352.70Transcription factor bHLH85 OS=Arabidopsis thalian... [more]
BH054_ARATH3.445e-1351.35Transcription factor bHLH54 OS=Arabidopsis thalian... [more]
IND_ARATH7.674e-1361.82Transcription factor IND OS=Arabidopsis thaliana G... [more]

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BLAST of Ca_09396 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7KSC0_MEDTR8.811e-3970.00LAX OS=Medicago truncatula GN=MTR_7g069590 PE=4 SV... [more]
I1KG08_SOYBN2.400e-3667.18Uncharacterized protein OS=Glycine max PE=4 SV=2[more]
K7L1X0_SOYBN6.535e-3464.89Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A5BMK9_VITVI1.043e-3164.60Putative uncharacterized protein OS=Vitis vinifera... [more]
M5W2M5_PRUPE5.725e-3063.03Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
K7KCZ5_SOYBN5.725e-3059.70Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
K7K3F3_SOYBN9.140e-2866.97Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
K4CPZ7_SOLLC9.140e-2858.68Uncharacterized protein OS=Solanum lycopersicum GN... [more]
B9NI62_POPTR1.906e-2564.08Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9HCY8_POPTR9.458e-2568.89Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]

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BLAST of Ca_09396 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
BH140_ARATH4.828e-3082.81Transcription factor bHLH140 OS=Arabidopsis thalia... [more]
LAX1_ORYSJ1.452e-2881.36Transcription factor LAX PANICLE 1 OS=Oryza sativa... [more]
BH139_ARATH2.540e-1850.65Transcription factor bHLH139 OS=Arabidopsis thalia... [more]
BH087_ARATH8.121e-1863.46Transcription factor bHLH87 OS=Arabidopsis thalian... [more]
LF_ORYSJ2.814e-1759.65Transcription factor LATE FLOWERING OS=Oryza sativ... [more]
BH054_ARATH3.815e-1750.00Transcription factor bHLH54 OS=Arabidopsis thalian... [more]
IND_ARATH6.756e-1761.82Transcription factor IND OS=Arabidopsis thaliana O... [more]
BH085_ARATH6.920e-1754.29Transcription factor bHLH85 OS=Arabidopsis thalian... [more]
BH084_ARATH1.815e-1647.67Transcription factor bHLH84 OS=Arabidopsis thalian... [more]
BH086_ARATH1.660e-1562.75Putative transcription factor bHLH086 OS=Arabidops... [more]
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Helix-loop-helix DNA-bindingGENE3D4.10.280.10no descriptioncoord: 54..95
score: 3.8
IPR011598Helix-loop-helix DNA-bindingPFAMPF00010HLHcoord: 50..90
score: 1.4
IPR011598Helix-loop-helix DNA-bindingSMARTSM00353helix loop helix domaincoord: 47..96
score: 2.4
IPR011598Helix-loop-helix DNA-bindingPROFILEPS50888HLHcoord: 23..91
score: 11
IPR011598Helix-loop-helix DNA-bindingSUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 31..108
score: 2.5
NoneNo IPR availablePANTHERPTHR12565FAMILY NOT NAMEDcoord: 8..94
score: 3.6
NoneNo IPR availablePANTHERPTHR12565:SF7CENTROMERE-BINDING PROTEIN 1, CBP-1coord: 8..94
score: 3.6
NoneNo IPR availableSEGsegsegcoord: 3..13
score: NAcoord: 17..43
score
NoneNo IPR availableSEGsegsegcoord: 2..19
score: NAcoord: 31..44
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_09396_v1.0_kabuli ID=Ca_09396_v1.0_kabuli; Name=Ca_09396; organism=Cicer arietinum; type=mRNA; length=489bp
ATGGAGTGCAACTTTCCTCCTCCACCTTGCAACAACAATACTATCACTTC
TTCATCTTCAAAAACAAAGAGAAAGGAGAAAAAGGGTGTGAAGAAAAGCA
AAGGTTCATCATCAGTGAAACTTTCAACTGATCCACAAAGTGTTGCAGCT
AGAGAAAGAAGACATAGAATCAGTGACAGGTTCAAGATTCTTCAGAGTAT
GGTACCTGGTGGGAGTAAAATGGACACTGTTTCTATGTTGGAAGAAGCTA
TTCACTATGTTAAGTTTCTTAAGACACAGATTTGGCTTCATCAAACAATG
ATTAACTTTGTTGATGATGATCACATGTTCATTCCTCAAGAACATAACAA
CTTTCATTCTCTTGATCAACATATTAATCCTAACTCAAGTTCAATTGAGC
CTTTGGATACTTTGCCACAGTTACCACTAGAGCAGTTCTGTTTTCAAGGT
GAAGAAGAGAACAAATTCATCTTTAATATGCCACTATGA
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protein sequence of Ca_09396_v1.0_kabuli

>Ca_09396_v1.0_kabuli ID=Ca_09396_v1.0_kabuli; Name=Ca_09396_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=162bp
MECNFPPPPCNNNTITSSSSKTKRKEKKGVKKSKGSSSVKLSTDPQSVAA
RERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTM
INFVDDDHMFIPQEHNNFHSLDQHINPNSSSIEPLDTLPQLPLEQFCFQG
EEENKFIFNMPL
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mRNA from alignment at Ca3:19939002..19939490-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_09396_v1.0_kabuli ID=Ca_09396_v1.0_kabuli; Name=Ca_09396; organism=Cicer arietinum; type=mRNA; length=489bp; location=Sequence derived from: Ca3:19939002..19939490- (Cicer arietinum
ATGGAGTGCAACTTTCCTCCTCCACCTTGCAACAACAATACTATCACTTC
TTCATCTTCAAAAACAAAGAGAAAGGAGAAAAAGGGTGTGAAGAAAAGCA
AAGGTTCATCATCAGTGAAACTTTCAACTGATCCACAAAGTGTTGCAGCT
AGAGAAAGAAGACATAGAATCAGTGACAGGTTCAAGATTCTTCAGAGTAT
GGTACCTGGTGGGAGTAAAATGGACACTGTTTCTATGTTGGAAGAAGCTA
TTCACTATGTTAAGTTTCTTAAGACACAGATTTGGCTTCATCAAACAATG
ATTAACTTTGTTGATGATGATCACATGTTCATTCCTCAAGAACATAACAA
CTTTCATTCTCTTGATCAACATATTAATCCTAACTCAAGTTCAATTGAGC
CTTTGGATACTTTGCCACAGTTACCACTAGAGCAGTTCTGTTTTCAAGGT
GAAGAAGAGAACAAATTCATCTTTAATATGCCACTATGA
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Coding sequence (CDS) from alignment at Ca3:19939002..19939490-

>Ca_09396_v1.0_kabuli ID=Ca_09396_v1.0_kabuli; Name=Ca_09396; organism=Cicer arietinum; type=CDS; length=489bp; location=Sequence derived from: Ca3:19939002..19939490- (Cicer arietinum
ATGGAGTGCAACTTTCCTCCTCCACCTTGCAACAACAATACTATCACTTC
TTCATCTTCAAAAACAAAGAGAAAGGAGAAAAAGGGTGTGAAGAAAAGCA
AAGGTTCATCATCAGTGAAACTTTCAACTGATCCACAAAGTGTTGCAGCT
AGAGAAAGAAGACATAGAATCAGTGACAGGTTCAAGATTCTTCAGAGTAT
GGTACCTGGTGGGAGTAAAATGGACACTGTTTCTATGTTGGAAGAAGCTA
TTCACTATGTTAAGTTTCTTAAGACACAGATTTGGCTTCATCAAACAATG
ATTAACTTTGTTGATGATGATCACATGTTCATTCCTCAAGAACATAACAA
CTTTCATTCTCTTGATCAACATATTAATCCTAACTCAAGTTCAATTGAGC
CTTTGGATACTTTGCCACAGTTACCACTAGAGCAGTTCTGTTTTCAAGGT
GAAGAAGAGAACAAATTCATCTTTAATATGCCACTATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom