Ca_12030, Ca_12030_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_12030
Unique NameCa_12030_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length627
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca3chromosomeCa3:32930797..32932575 +Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR187Pisum sativum Cameor genome v1aPisum sativum
capsR197Pisum sativum Cameor genome v1aPisum sativum
capsR232Pisum sativum Cameor genome v1aPisum sativum
cavuR163Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR207Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR218Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR192Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR234Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR252Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0319Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0344Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0149Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0275Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0588Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0890Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0893Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0938Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1116Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL464Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL636Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR175Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR200Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR202Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR189Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR208Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR221Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR187Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR205Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR208Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR222Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR195Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR212Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR206Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR212Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR248Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR270Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR154Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR195Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR205Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR074Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR081Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR084Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL341Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL439Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL633Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR175Cicer arietinum
cacarR183Cicer arietinum
cacarR204Cicer arietinum
cacarR221Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.3g050160.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_022779209.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg1467.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Phvul.005G136500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Va02G022480.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Phvul.007G221500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Hedin2.R1.1g042200.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigun05g250100.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Va03G072860.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
evm.model.Chr07.2201.1.6211317bVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.3g041880.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat05G0767600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Va05G050190.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-KK1_010096Cajanus cajan Asha genome v1.0Cajanus cajan
jg43671.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.1g028960.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun07g069300.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
LR48_mrnaVigan03g236500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_014642636.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr05.2356Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
LR48_mrnaVigan05g181100Vigna angularis Jingnong 6 genome v1.1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004487075.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_012713942.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_004497434.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_12030-CDS1Ca_12030-CDS1Cicer arietinumCDS
Ca_12030-CDS2Ca_12030-CDS2Cicer arietinumCDS
Ca_12030-CDS3Ca_12030-CDS3Cicer arietinumCDS
Ca_12030-CDS4Ca_12030-CDS4Cicer arietinumCDS
Ca_12030-CDS5Ca_12030-CDS5Cicer arietinumCDS
Ca_12030-CDS6Ca_12030-CDS6Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_12030_v1.0_kabuliCa_12030_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_12030 vs. SwissProt
Match: SYP71_ARATH (Syntaxin-71 OS=Arabidopsis thaliana GN=SYP71 PE=1 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.548e-69
Identity = 135/215 (62.79%), Postives = 165/215 (76.74%), Query Frame = 1 
Query:    1 MSIIDILTRVDSICLKYDRYDVVKQDDSTNSADDAFVKLYAVVDANIDAAIQKAETASKEKNRASTVAINAEIRRTKARLLDEIPKLQRLAIKKENGLSSQELAVRNDLVLALPERIQAIPDGTPATPKQTGGW--GASASRPEIKFDSDGRFDDGYFQQTEESSGFRQEYKMR---LRFGCD--RRRIRYFENMAHDMNEEMDRQVPLMDEIDT 624
            M++IDILTRVDSIC KYD+YDV KQ ++  S DDAF +LY   +  I+ A++KAE  +KEKNRA+ VA+NAEIRRTKARL +E+PKLQRLA+K+  GL+++ELA RNDLVLALP RI+AIPDGT   PK T  W   ++ SRP+IKFDSDGRFDD YFQ++ ESS FRQEY+MR      G D     +   +NMA DMNEE+DRQVPLMDEIDT
Sbjct:    1 MTVIDILTRVDSICKKYDKYDVDKQREANISGDDAFARLYGAFETQIETALEKAELVTKEKNRAAAVAMNAEIRRTKARLSEEVPKLQRLAVKRVKGLTTEELAARNDLVLALPARIEAIPDGTAGGPKSTSAWTPSSTTSRPDIKFDSDGRFDDDYFQESNESSQFRQEYEMRKIKQEQGLDMISEGLDALKNMASDMNEELDRQVPLMDEIDT 215
[Close]
BLAST of Ca_12030 vs. SwissProt
Match: SYP72_ARATH (Syntaxin-72 OS=Arabidopsis thaliana GN=SYP72 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 9.115e-54
Identity = 115/216 (53.24%), Postives = 154/216 (71.30%), Query Frame = 1 
Query:    1 MSIIDILTRVDSICLKYDRYDVVKQDDSTNSADDAFVKLYAVVDANIDAAIQKAETASKEKNRASTVAINAEIRRTKARLLDEIPKLQRLAIKKENGLSSQELAVRNDLVLALPERIQAIPDGTPATPKQTGG-W-GASASRPEIKFD-SDGRFDDGYFQQTEESSGFRQEYKMRLR---FGCD--RRRIRYFENMAHDMNEEMDRQVPLMDEIDT 624
            M +IDI+ RVD IC KYD+YD+ K  +   S DDAF +L+  +D++I+A ++KAE AS EKNRA+ VA+NAE+RRTKARL +++ KLQ+LA+KK  GL+ +E   R DLV+AL +R+QAIPDG     KQ    W GASA    IKFD S+   DDG+FQQ+EESS FRQEY+MR +    G D     +   +N+A DMNEE+D+QVPLM+E++T
Sbjct:    1 MPVIDIIFRVDEICKKYDKYDIDKHREIGASGDDAFSRLFTSIDSDIEAVLRKAELASTEKNRAAAVAMNAEVRRTKARLAEDVVKLQKLAVKKIKGLTREERESRCDLVIALADRLQAIPDGNEHGAKQANSDWGGASAPNKNIKFDMSEEDMDDGFFQQSEESSQFRQEYEMRRKKQDEGLDIISEGLDALKNLARDMNEELDKQVPLMEEMET 216
[Close]
BLAST of Ca_12030 vs. SwissProt
Match: SYP73_ARATH (Syntaxin-73 OS=Arabidopsis thaliana GN=SYP73 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.555e-53
Identity = 112/215 (52.09%), Postives = 146/215 (67.91%), Query Frame = 1 
Query:    1 MSIIDILTRVDSICLKYDRYDVVKQDDSTNSADDAFVKLYAVVDANIDAAIQKAETASKEKNRASTVAINAEIRRTKARLLDEIPKLQRLAIKKENGLSSQELAVRNDLVLALPERIQAIPDGTPATPKQTGGWGASASRPEIKFD---SDGRFDDGYFQQTEESSGFRQEYKMR----LRFGCDRRRIRYFENMAHDMNEEMDRQVPLMDEIDT 624
            M +ID++TRVDSIC KY++YD+ +Q D+  S DDAF +LY+ V+  ++  +QK E  S E N+A  VA+NAEIRRTKARLL+ IPKLQRL++KK  GLS +EL  RNDLVL+L ++I+AIP+ +       GGW AS S   I+FD   SD R    YFQ T ES  F+QEY+M+     R       +   +NMA D+NEE+DRQ PLMDEIDT
Sbjct:    1 MGVIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSETNKAKAVAMNAEIRRTKARLLEGIPKLQRLSLKKVKGLSKEELDARNDLVLSLRDKIEAIPESSAPV---VGGWEASTSYSNIRFDTNVSDDRIGSEYFQPTGESDQFKQEYEMKRIKQARLDYIAEGLDTLKNMAQDINEELDRQEPLMDEIDT 212
[Close]
BLAST of Ca_12030 vs. TrEMBL
Match: G7L2Q9_MEDTR (Syntaxin-71 OS=Medicago truncatula GN=MTR_7g100980 PE=4 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 3.439e-85
Identity = 163/213 (76.53%), Postives = 181/213 (84.98%), Query Frame = 1 
Query:    1 MSIIDILTRVDSICLKYDRYDVVKQDDSTNSADDAFVKLYAVVDANIDAAIQKAETASKEKNRASTVAINAEIRRTKARLLDEIPKLQRLAIKKENGLSSQELAVRNDLVLALPERIQAIPDGTPATPKQTGGWGASASRPEIKFDSDGRFDDGYFQQTEESSGFRQEYKMR-----LRFGCDRRRIRYFENMAHDMNEEMDRQVPLMDEIDT 624
            MS+I+ILTRVD+IC KYDRYDVVK +D+  SADDAF KLYA+ DANI+AA+QKAETASKEKNRASTVAINAEIRRTKARLL+EIPKLQRLA+KK  GLS QE + RNDLVL+LPERIQAIPDGTPA PKQTGGWGASA+RPEIKFDSDGR DDGYF+ T+ESS FRQEY+MR      R       +   +NMAHDMNEE DRQVPLMDEIDT
Sbjct:    1 MSVIEILTRVDTICKKYDRYDVVKHNDANVSADDAFAKLYAIFDANIEAALQKAETASKEKNRASTVAINAEIRRTKARLLEEIPKLQRLAVKKVKGLSLQEFSTRNDLVLSLPERIQAIPDGTPAAPKQTGGWGASATRPEIKFDSDGRLDDGYFEPTKESSQFRQEYEMRKMKQASRLDVIAEGLDTLKNMAHDMNEEFDRQVPLMDEIDT 213
[Close]
BLAST of Ca_12030 vs. TrEMBL
Match: I1NA78_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 1.766e-81
Identity = 159/212 (75.00%), Postives = 175/212 (82.55%), Query Frame = 1 
Query:    1 MSIIDILTRVDSICLKYDRYDVVKQDDSTNSADDAFVKLYAVVDANIDAAIQKAETASKEKNRASTVAINAEIRRTKARLLDEIPKLQRLAIKKENGLSSQELAVRNDLVLALPERIQAIPDGTPATPKQTGGWGASASRPEIKFDSDGRFDDGYFQQTEESSGFRQEYKMR----LRFGCDRRRIRYFENMAHDMNEEMDRQVPLMDEIDT 624
            MS+IDILTRVDSIC KYD+YDV KQ DS  SADDAF KLYA VDA+I+A +QKAETA KEK++ASTVAINAEIRRTKARLL+E+PKLQRLA+KK  GLSSQE A RNDL LALP+RIQAIPDG PA PKQTG W ASASRP IKFDSDG+FDD YFQQTEESS FRQEY+MR             +   +NMAHDMNEE+DRQVPLMDEIDT
Sbjct:    1 MSVIDILTRVDSICKKYDKYDVEKQRDSNLSADDAFAKLYASVDADIEALLQKAETADKEKSKASTVAINAEIRRTKARLLEEVPKLQRLAMKKVKGLSSQEFAARNDLALALPDRIQAIPDGAPAAPKQTGSWAASASRPGIKFDSDGKFDDEYFQQTEESSRFRQEYEMRKMKQASLDMIAEGLDTLKNMAHDMNEELDRQVPLMDEIDT 212
[Close]
BLAST of Ca_12030 vs. TrEMBL
Match: I1NA77_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 1.766e-81
Identity = 161/213 (75.59%), Postives = 177/213 (83.10%), Query Frame = 1 
Query:    1 MSIIDILTRVDSICLKYDRYDVVKQDDSTNSADDAFVKLYAVVDANIDAAIQKAETASKEKNRASTVAINAEIRRTKARLLDEIPKLQRLAIKKENGLSSQELAVRNDLVLALPERIQAIPDGTPATPKQTGGWGASASRPEIKFDSDGRFDDGYFQQTEESSGFRQEY---KMRLRFGCD--RRRIRYFENMAHDMNEEMDRQVPLMDEIDT 624
            MS+IDILTRVDSIC KYD+YDV KQ DS  SADDAF KLYA VDA+I+A +QKAETA KEK++ASTVAINAEIRRTKARLL+E+PKLQRLA+KK  GLSSQE A RNDL LALP+RIQAIPDG PA PKQTG W ASASRP IKFDSDG+FDD YFQQTEESS FRQEY   KM+   G D     +   +NMAHDMNEE+DRQVPLMDEIDT
Sbjct:    1 MSVIDILTRVDSICKKYDKYDVEKQRDSNLSADDAFAKLYASVDADIEALLQKAETADKEKSKASTVAINAEIRRTKARLLEEVPKLQRLAMKKVKGLSSQEFAARNDLALALPDRIQAIPDGAPAAPKQTGSWAASASRPGIKFDSDGKFDDEYFQQTEESSRFRQEYEMRKMKQDQGLDMIAEGLDTLKNMAHDMNEELDRQVPLMDEIDT 213
[Close]
BLAST of Ca_12030 vs. TrEMBL
Match: C6TKX1_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 2.550e-80
Identity = 158/213 (74.18%), Postives = 178/213 (83.57%), Query Frame = 1 
Query:    1 MSIIDILTRVDSICLKYDRYDVVKQDDSTNSADDAFVKLYAVVDANIDAAIQKAETASKEKNRASTVAINAEIRRTKARLLDEIPKLQRLAIKKENGLSSQELAVRNDLVLALPERIQAIPDGTPATPKQTGGWGASASRPEIKFDSDGRFDDGYFQQTEESSGFRQEY---KMRLRFGCD--RRRIRYFENMAHDMNEEMDRQVPLMDEIDT 624
            MS+IDILTRVDSIC KYD+YDV  Q DS  S+DDAF KLYA VDA+I+A +QKA+TASKEK++ASTVAINAEIRRTKARLL+E+PKLQRLA+KK  GLSSQE A RNDL LALP+RIQAIPDGTPA  KQ+G W ASASRP IKFDSDG+FDD YFQQTEESSGFR+EY   KM+   G D     +   +NMAHDMNEE+DRQVPLMDEIDT
Sbjct:    1 MSVIDILTRVDSICKKYDKYDVQSQRDSNLSSDDAFAKLYASVDADIEALLQKADTASKEKSKASTVAINAEIRRTKARLLEEVPKLQRLAMKKVKGLSSQEFAARNDLALALPDRIQAIPDGTPAASKQSGSWAASASRPGIKFDSDGKFDDEYFQQTEESSGFRKEYEMRKMKQDQGLDMIAEGLDTLKNMAHDMNEELDRQVPLMDEIDT 213
[Close]
BLAST of Ca_12030 vs. TrEMBL
Match: I1L8U0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 7.420e-80
Identity = 156/214 (72.90%), Postives = 177/214 (82.71%), Query Frame = 1 
Query:    1 MSIIDILTRVDSICLKYDRYDVVKQDDSTNSADDAFVKLYAVVDANIDAAIQKAETASKEKNRASTVAINAEIRRTKARLLDEIPKLQRLAIKKENGLSSQELAVRNDLVLALPERIQAIPDGTPATPKQTGGWGASASRPEIKFDSDGRFDDGYFQQTEESSGFRQEYKMRLRFGCDR------RRIRYFENMAHDMNEEMDRQVPLMDEIDT 624
            MS+IDILTRVDSIC KYD+YDV K  D+  S DDAF +LYA VDA+I+A +QKAE+ASKEK +AS VAINAEIRRTKARLL+E+PKLQRLA+KK  GLSSQE A RNDLVLALP+RIQAIPDG P  PKQTGGW ASASRPEIKFDSDGRFDD YFQQ+E+S+ FRQEY+MR R   D+        +   +NMAHDMNEE+DRQVPLMDEIDT
Sbjct:    1 MSVIDILTRVDSICKKYDKYDVDKHRDANVSGDDAFARLYASVDADIEALLQKAESASKEKGKASAVAINAEIRRTKARLLEEVPKLQRLAVKKVKGLSSQEFAARNDLVLALPDRIQAIPDGAPPVPKQTGGWAASASRPEIKFDSDGRFDDEYFQQSEQSNQFRQEYEMR-RMKQDQGLDVIAEGLDTLKNMAHDMNEELDRQVPLMDEIDT 213
[Close]
BLAST of Ca_12030 vs. TrEMBL
Match: I1LZ35_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 9.691e-80
Identity = 157/214 (73.36%), Postives = 176/214 (82.24%), Query Frame = 1 
Query:    1 MSIIDILTRVDSICLKYDRYDVVKQDDSTNSADDAFVKLYAVVDANIDAAIQKAETASKEKNRASTVAINAEIRRTKARLLDEIPKLQRLAIKKENGLSSQELAVRNDLVLALPERIQAIPDGTPATPKQTGGWGASASRPEIKFDSDGRFDDGYFQQTEESSGFRQEYKMRLRFGCDR------RRIRYFENMAHDMNEEMDRQVPLMDEIDT 624
            MS+IDILTRVDSIC KYD+YDV K  D+  S DDAF +LYA VDA+I A +QKAE+ASKEK +AS VAINAEIRRTKARLL+E+PKLQRLA+KK  GLSSQE A RNDLVLALP+RIQAIPDG P  PKQTGGW ASASRPEIKFDSDGRFDD YFQQ+E+SS FRQEY+MR R   D+        +   +NMAHDMNEE+DRQVPLMDEIDT
Sbjct:    1 MSVIDILTRVDSICKKYDKYDVEKHRDANVSGDDAFARLYASVDADIVALLQKAESASKEKGKASAVAINAEIRRTKARLLEEVPKLQRLAVKKVKGLSSQEFAARNDLVLALPDRIQAIPDGAPPVPKQTGGWAASASRPEIKFDSDGRFDDEYFQQSEQSSQFRQEYEMR-RMKQDQGLDVIAEGLDTLKNMAHDMNEELDRQVPLMDEIDT 213
[Close]
BLAST of Ca_12030 vs. TrEMBL
Match: D7TQJ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g02130 PE=4 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 4.810e-79
Identity = 155/213 (72.77%), Postives = 176/213 (82.63%), Query Frame = 1 
Query:    1 MSIIDILTRVDSICLKYDRYDVVKQDDSTNSADDAFVKLYAVVDANIDAAIQKAETASKEKNRASTVAINAEIRRTKARLLDEIPKLQRLAIKKENGLSSQELAVRNDLVLALPERIQAIPDGTPATPKQTGGWGASASRPEIKFDSDGRFDDGYFQQTEESSGFRQEYKMRLR---FGCD--RRRIRYFENMAHDMNEEMDRQVPLMDEIDT 624
            M++IDILTRVD+IC KYD+YD+ KQ D   S DDAF +LYAVV+A+I+AA+QKA+TAS EKNRAS VA+NAEIRRTKARLL+E+PKLQRLAIKK  GLS++ELA RNDLVLALP+RIQAIPDG    PKQTGGW ASASR EIKFDSDGRFD  YFQQTEESS FRQEY+MR      G D     +   +NMAHDMNEE+DRQVPLMDEIDT
Sbjct:    1 MTVIDILTRVDAICKKYDKYDIDKQKDLNVSGDDAFARLYAVVEADIEAALQKADTASNEKNRASAVALNAEIRRTKARLLEEVPKLQRLAIKKVKGLSTEELAARNDLVLALPDRIQAIPDGAATAPKQTGGWAASASRTEIKFDSDGRFDSEYFQQTEESSQFRQEYEMRKMNQDQGLDVIAEGLDTLKNMAHDMNEELDRQVPLMDEIDT 213
[Close]
BLAST of Ca_12030 vs. TrEMBL
Match: K0J6E7_LOTJA (SNARE protein OS=Lotus japonicus GN=LjSYP71 PE=2 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 6.281e-79
Identity = 154/214 (71.96%), Postives = 176/214 (82.24%), Query Frame = 1 
Query:    1 MSIIDILTRVDSICLKYDRYDVVKQDDSTNSADDAFVKLYAVVDANIDAAIQKAETASKEKNRASTVAINAEIRRTKARLLDEIPKLQRLAIKKENGLSSQELAVRNDLVLALPERIQAIPDGTPATPKQTGGWGASASRPEIKFDSDGRFDDGYFQQTEESSGFRQEYKMRLRFGCDR------RRIRYFENMAHDMNEEMDRQVPLMDEIDT 624
            MS+ID+LTRVD+IC KYD+YDV +  +S  S DDAF +LYA VDA+I+A  QKAETASKEK +AS VAINAEIRRTKARLL+E+PKLQ+LA+KK  GLSSQE A RNDLVLALPERIQAIPDGTPA PKQTGGW +S SRP+IKFDSDGRFDD YFQQTEESS FR EY+MR R   D+        +   ++MAHDMNEE+DRQVPLMDEIDT
Sbjct:    1 MSVIDLLTRVDTICNKYDKYDVERHRESNLSGDDAFARLYATVDADIEALNQKAETASKEKGKASAVAINAEIRRTKARLLEEVPKLQKLAVKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWASSGSRPDIKFDSDGRFDDEYFQQTEESSRFRNEYEMR-RIKQDQGLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDT 213
[Close]
BLAST of Ca_12030 vs. TrEMBL
Match: I3S3U8_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 4.072e-78
Identity = 153/214 (71.50%), Postives = 175/214 (81.78%), Query Frame = 1 
Query:    1 MSIIDILTRVDSICLKYDRYDVVKQDDSTNSADDAFVKLYAVVDANIDAAIQKAETASKEKNRASTVAINAEIRRTKARLLDEIPKLQRLAIKKENGLSSQELAVRNDLVLALPERIQAIPDGTPATPKQTGGWGASASRPEIKFDSDGRFDDGYFQQTEESSGFRQEYKMRLRFGCDR------RRIRYFENMAHDMNEEMDRQVPLMDEIDT 624
            MS+ID+LTRVD+IC KYD+YDV +  +S  S DDAF +LYA VDA+I+A  QKAETASKEK +AS VAINAEIRRTKARLL+E+PKLQ+LA+KK  GLSSQE A RNDLV ALPERIQAIPDGTPA PKQTGGW +S SRP+IKFDSDGRFDD YFQQTEESS FR EY+MR R   D+        +   ++MAHDMNEE+DRQVPLMDEIDT
Sbjct:    1 MSVIDLLTRVDTICNKYDKYDVERHRESNLSGDDAFARLYATVDADIEALNQKAETASKEKGKASAVAINAEIRRTKARLLEEVPKLQKLAVKKVKGLSSQEFAARNDLVPALPERIQAIPDGTPAAPKQTGGWASSGSRPDIKFDSDGRFDDEYFQQTEESSRFRNEYEMR-RIKQDQGLDVIVEGLDTLKDMAHDMNEELDRQVPLMDEIDT 213
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BLAST of Ca_12030 vs. TrEMBL
Match: C6TI87_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 5.318e-78
Identity = 153/200 (76.50%), Postives = 167/200 (83.50%), Query Frame = 1 
Query:    1 MSIIDILTRVDSICLKYDRYDVVKQDDSTNSADDAFVKLYAVVDANIDAAIQKAETASKEKNRASTVAINAEIRRTKARLLDEIPKLQRLAIKKENGLSSQELAVRNDLVLALPERIQAIPDGTPATPKQTGGWGASASRPEIKFDSDGRFDDGYFQQTEESSGFRQEYKMR-----LRFGCDRRRIRYFENMAHDMNEE 585
            MS+IDILTRVDSIC KYD+YDV KQ DS  SADDAF KLYA VDA+I+A +QKAETA KEK++ASTVAINAEIRRTKARLL+E+PKLQRLA+KK  GLSSQE A RNDL LALP+RIQAIPDG PA PKQTG W ASASRP IKFDSDG+FDD YFQQTEESS F QEY+MR        G D RRI YFENMAHDMNE+
Sbjct:    1 MSVIDILTRVDSICKKYDKYDVEKQRDSNLSADDAFAKLYASVDADIEALLQKAETADKEKSKASTVAINAEIRRTKARLLEEVPKLQRLAMKKVKGLSSQEFAARNDLALALPDRIQAIPDGAPAAPKQTGSWAASASRPGIKFDSDGKFDDEYFQQTEESSRFGQEYEMRKMKQDQSLGYDCRRIGYFENMAHDMNED 200
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BLAST of Ca_12030 vs. DB:Swiss
Match: SYP71_ARATH (Syntaxin-71 OS=Arabidopsis thaliana OX=3702 GN=SYP71 PE=1 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 8.261e-91
Identity = 136/215 (63.26%), Postives = 165/215 (76.74%), Query Frame = 1 
Query:    1 MSIIDILTRVDSICLKYDRYDVVKQDDSTNSADDAFVKLYAVVDANIDAAIQKAETASKEKNRASTVAINAEIRRTKARLLDEIPKLQRLAIKKENGLSSQELAVRNDLVLALPERIQAIPDGTPATPKQTGGWGASA--SRPEIKFDSDGRFDDGYFQQTEESSGFRQEYKMR---LRFGCD--RRRIRYFENMAHDMNEEMDRQVPLMDEIDT 624
            M++IDILTRVDSIC KYD+YDV KQ ++  S DDAF +LY   +  I+ A++KAE  +KEKNRA+ VA+NAEIRRTKARL +E+PKLQRLA+K+  GL+++ELA RNDLVLALP RI+AIPDGT   PK T  W  S+  SRP+IKFDSDGRFDD YFQ++ ESS FRQEY+MR      G D     +   +NMA DMNEE+DRQVPLMDEIDT
Sbjct:    1 MTVIDILTRVDSICKKYDKYDVDKQREANISGDDAFARLYGAFETQIETALEKAELVTKEKNRAAAVAMNAEIRRTKARLSEEVPKLQRLAVKRVKGLTTEELAARNDLVLALPARIEAIPDGTAGGPKSTSAWTPSSTTSRPDIKFDSDGRFDDDYFQESNESSQFRQEYEMRKIKQEQGLDMISEGLDALKNMASDMNEELDRQVPLMDEIDT 215
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BLAST of Ca_12030 vs. DB:Swiss
Match: SYP72_ARATH (Syntaxin-72 OS=Arabidopsis thaliana OX=3702 GN=SYP72 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.958e-68
Identity = 115/216 (53.24%), Postives = 154/216 (71.30%), Query Frame = 1 
Query:    1 MSIIDILTRVDSICLKYDRYDVVKQDDSTNSADDAFVKLYAVVDANIDAAIQKAETASKEKNRASTVAINAEIRRTKARLLDEIPKLQRLAIKKENGLSSQELAVRNDLVLALPERIQAIPDGTPATPKQTGG-W-GASASRPEIKFD-SDGRFDDGYFQQTEESSGFRQEYKMRLRF---GCD--RRRIRYFENMAHDMNEEMDRQVPLMDEIDT 624
            M +IDI+ RVD IC KYD+YD+ K  +   S DDAF +L+  +D++I+A ++KAE AS EKNRA+ VA+NAE+RRTKARL +++ KLQ+LA+KK  GL+ +E   R DLV+AL +R+QAIPDG     KQ    W GASA    IKFD S+   DDG+FQQ+EESS FRQEY+MR +    G D     +   +N+A DMNEE+D+QVPLM+E++T
Sbjct:    1 MPVIDIIFRVDEICKKYDKYDIDKHREIGASGDDAFSRLFTSIDSDIEAVLRKAELASTEKNRAAAVAMNAEVRRTKARLAEDVVKLQKLAVKKIKGLTREERESRCDLVIALADRLQAIPDGNEHGAKQANSDWGGASAPNKNIKFDMSEEDMDDGFFQQSEESSQFRQEYEMRRKKQDEGLDIISEGLDALKNLARDMNEELDKQVPLMEEMET 216
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BLAST of Ca_12030 vs. DB:Swiss
Match: SYP73_ARATH (Syntaxin-73 OS=Arabidopsis thaliana OX=3702 GN=SYP73 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 2.919e-68
Identity = 112/215 (52.09%), Postives = 146/215 (67.91%), Query Frame = 1 
Query:    1 MSIIDILTRVDSICLKYDRYDVVKQDDSTNSADDAFVKLYAVVDANIDAAIQKAETASKEKNRASTVAINAEIRRTKARLLDEIPKLQRLAIKKENGLSSQELAVRNDLVLALPERIQAIPDGTPATPKQTGGWGASASRPEIKFD---SDGRFDDGYFQQTEESSGFRQEYKMR----LRFGCDRRRIRYFENMAHDMNEEMDRQVPLMDEIDT 624
            M +ID++TRVDSIC KY++YD+ +Q D+  S DDAF +LY+ V+  ++  +QK E  S E N+A  VA+NAEIRRTKARLL+ IPKLQRL++KK  GLS +EL  RNDLVL+L ++I+AIP+ +       GGW AS S   I+FD   SD R    YFQ T ES  F+QEY+M+     R       +   +NMA D+NEE+DRQ PLMDEIDT
Sbjct:    1 MGVIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSETNKAKAVAMNAEIRRTKARLLEGIPKLQRLSLKKVKGLSKEELDARNDLVLSLRDKIEAIPESSAPV---VGGWEASTSYSNIRFDTNVSDDRIGSEYFQPTGESDQFKQEYEMKRIKQARLDYIAEGLDTLKNMAQDINEELDRQEPLMDEIDT 212
The following BLAST results are available for this feature:
BLAST of Ca_12030 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
SYP71_ARATH1.548e-6962.79Syntaxin-71 OS=Arabidopsis thaliana GN=SYP71 PE=1 ... [more]
SYP72_ARATH9.115e-5453.24Syntaxin-72 OS=Arabidopsis thaliana GN=SYP72 PE=2 ... [more]
SYP73_ARATH1.555e-5352.09Syntaxin-73 OS=Arabidopsis thaliana GN=SYP73 PE=2 ... [more]
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BLAST of Ca_12030 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7L2Q9_MEDTR3.439e-8576.53Syntaxin-71 OS=Medicago truncatula GN=MTR_7g100980... [more]
I1NA78_SOYBN1.766e-8175.00Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I1NA77_SOYBN1.766e-8175.59Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
C6TKX1_SOYBN2.550e-8074.18Uncharacterized protein OS=Glycine max PE=2 SV=1[more]
I1L8U0_SOYBN7.420e-8072.90Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I1LZ35_SOYBN9.691e-8073.36Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
D7TQJ1_VITVI4.810e-7972.77Putative uncharacterized protein OS=Vitis vinifera... [more]
K0J6E7_LOTJA6.281e-7971.96SNARE protein OS=Lotus japonicus GN=LjSYP71 PE=2 S... [more]
I3S3U8_LOTJA4.072e-7871.50Uncharacterized protein OS=Lotus japonicus PE=2 SV... [more]
C6TI87_SOYBN5.318e-7876.50Putative uncharacterized protein (Fragment) OS=Gly... [more]

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BLAST of Ca_12030 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
SYP71_ARATH8.261e-9163.26Syntaxin-71 OS=Arabidopsis thaliana OX=3702 GN=SYP... [more]
SYP72_ARATH1.958e-6853.24Syntaxin-72 OS=Arabidopsis thaliana OX=3702 GN=SYP... [more]
SYP73_ARATH2.919e-6852.09Syntaxin-73 OS=Arabidopsis thaliana OX=3702 GN=SYP... [more]
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12380FAMILY NOT NAMEDcoord: 1..207
score: 1
NoneNo IPR availablePANTHERPTHR12380:SF24OS05G0553700 PROTEINcoord: 1..207
score: 1
NoneNo IPR availableSEGsegsegcoord: 13..35
score
NoneNo IPR availableSEGsegsegcoord: 2..15
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_12030_v1.0_kabuli ID=Ca_12030_v1.0_kabuli; Name=Ca_12030; organism=Cicer arietinum; type=mRNA; length=627bp
ATGAGCATCATCGACATTCTAACCCGAGTTGATTCAATTTGTCTAAAGTA
CGACAGATACGACGTCGTTAAGCAAGATGATTCCACTAACTCCGCCGATG
ACGCTTTCGTCAAACTCTACGCCGTCGTCGACGCAAACATCGATGCCGCT
ATTCAGAAAGCAGAAACCGCTTCCAAGGAGAAAAATAGGGCTTCAACTGT
AGCGATCAATGCTGAGATTCGTCGCACTAAGGCTAGGTTACTGGACGAGA
TCCCTAAGTTGCAGAGATTGGCCATAAAAAAGGAAAATGGGCTTTCGTCG
CAAGAATTGGCGGTCCGTAATGATTTGGTTCTTGCATTGCCGGAGAGGAT
CCAAGCAATCCCAGATGGGACCCCTGCCACACCCAAACAAACTGGAGGTT
GGGGAGCTTCTGCCTCACGTCCTGAAATTAAATTTGATTCAGATGGTCGA
TTCGATGATGGGTACTTTCAACAAACTGAAGAATCAAGTGGGTTTAGGCA
GGAGTATAAAATGCGATTAAGGTTTGGATGTGATCGCAGAAGGATTAGAT
ACTTTGAAAACATGGCACACGATATGAACGAGGAAATGGATAGGCAAGTT
CCACTGATGGATGAGATTGATACTTAG
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protein sequence of Ca_12030_v1.0_kabuli

>Ca_12030_v1.0_kabuli ID=Ca_12030_v1.0_kabuli; Name=Ca_12030_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=208bp
MSIIDILTRVDSICLKYDRYDVVKQDDSTNSADDAFVKLYAVVDANIDAA
IQKAETASKEKNRASTVAINAEIRRTKARLLDEIPKLQRLAIKKENGLSS
QELAVRNDLVLALPERIQAIPDGTPATPKQTGGWGASASRPEIKFDSDGR
FDDGYFQQTEESSGFRQEYKMRLRFGCDRRRIRYFENMAHDMNEEMDRQV
PLMDEIDT
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mRNA from alignment at Ca3:32930797..32932575+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_12030_v1.0_kabuli ID=Ca_12030_v1.0_kabuli; Name=Ca_12030; organism=Cicer arietinum; type=mRNA; length=1779bp; location=Sequence derived from: Ca3:32930797..32932575+ (Cicer arietinum
ATGAGCATCATCGACATTCTAACCCGAGTTGATTCAATTTGTCTAAAGTA
CGACAGATACGACGTCGTTAAGCAAGATGATTCCACTAACTCCGCCGATG
ACGCTTTCGTCAAACTCTACGCCGTCGTCGACGCAAACATCGATGCCGCT
ATTCAGGTCACATTTTTATCTCCCGATGCTCTTCAATTTCGTTTTCATTC
TATGACAAATTCACATTGTGTTGATGATCATTTATTCATTTATTTTGAGT
TTCATCTAAAATTGTTAATTGTTAGTATAATGTGGAATTAATTTTGTGCA
GAAAGCAGAAACCGCTTCCAAGGAGAAAAATAGGGCTTCAACTGTAGCGA
TCAATGCTGAGATTCGTCGCACTAAGGCTAGGTTACTGGACGAGATCCCT
AAGTTGCAGAGATTGGCCATAAAAAAGGTTGCTTTTTTGCTTCTCTCATA
CTTCTAATACCCTTTGATTGCTGCTATTTATTTATTTATTTAATTTTTAT
TTTAGGAGGTGATCTATTAATTTTCTTAGATTTGTTATTTTAATGTGTGT
GTTTTTTAGGTTAGAATGATGAATTCATTATATTTACATATGGCATACTC
ACTTCAAAATGAAATATAAACAAAAAAAGTACTTGAAAATTGGTCTGGTC
TAGGCTTTAGCTAGATACGTCAAATTTTCAAATACCTTTTTGATTATATT
TCATTCTAAAGAGAGTGTGTCTTAGTTCTGATTGATTGGATTTGTAAATT
ATTGTAATTGTAATGTAATTTTGAGTTGTCAATAGTCTTGCAGCTGCTAC
TTTCAACTGATATTCCCAGTTACATAGATGTAGCTAGCTAGTTACACGTT
ATCAGAGAAGATCATTTGTTCAATCTACTTTGACTAGGAATGGGGCAGAT
TTTTTCTTGTTTCTGTATGTGGTTCTGAATTTTATGATTATTTGAAAACA
CTGTTGACTTGTTACATTTGGCAGGTGTGTTATAATATCTTGATAGCTTG
ACTGATTGTCATTGCACAATTGGTAAATTTGTGGCGTATAAAGTGTTAAA
ATTTTAATGACAAAATTATACATTTGTCCAATTGGTACTCTGTATTCACA
GGAAAATGGGCTTTCGTCGCAAGAATTGGCGGTCCGTAATGATTTGGTTC
TTGCATTGCCGGAGAGGATCCAAGCAATCCCAGATGGGACCCCTGCCACA
CCCAAACAAACTGGAGGTTGGGGAGCTTCTGCCTCACGTCCTGAAATTAA
ATTTGATTCAGGTAATTGAAATTATCCAAGTCTCGTAGCTATACAAGTAT
AGTAGTTTGTGAAAGCAATGCTTTATAATGAATTGTTTCTGTTCATTTCT
GTGTATTGTGTCAATCACAGATGGTCGATTCGATGATGGGTACTTTCAAC
AAACTGAAGAATCAAGTGGGTTTAGGCAGGAGTATAAAATGCGTAAAATG
AAACAGGCAAGTCGCTTGTAGCAGCTGTAACCAGAGAGCTGTTGTCTTTG
TCGGGATGTTATATGTGGAATGCTAACTTGGACATGGTTTTGAATCTAAT
TATATGAAACTTTTAGGATTAAGGTTTGGATGTGATCGCAGAAGGATTAG
ATACTTTGAAAACATGGCACACGATATGAACGAGGTCAGATTCATTATAG
TGTCTATCTTTCATCCTTTGTGTATGTGATAATTTCTTCTTAATGTTGAA
GTTTTTTATATACGTACGTCTGTGCCAAATGCAGGAAATGGATAGGCAAG
TTCCACTGATGGATGAGATTGATACTTAG
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Coding sequence (CDS) from alignment at Ca3:32930797..32932575+

>Ca_12030_v1.0_kabuli ID=Ca_12030_v1.0_kabuli; Name=Ca_12030; organism=Cicer arietinum; type=CDS; length=627bp; location=Sequence derived from: Ca3:32930797..32932575+ (Cicer arietinum
ATGAGCATCATCGACATTCTAACCCGAGTTGATTCAATTTGTCTAAAGTA
CGACAGATACGACGTCGTTAAGCAAGATGATTCCACTAACTCCGCCGATG
ACGCTTTCGTCAAACTCTACGCCGTCGTCGACGCAAACATCGATGCCGCT
ATTCAGAAAGCAGAAACCGCTTCCAAGGAGAAAAATAGGGCTTCAACTGT
AGCGATCAATGCTGAGATTCGTCGCACTAAGGCTAGGTTACTGGACGAGA
TCCCTAAGTTGCAGAGATTGGCCATAAAAAAGGAAAATGGGCTTTCGTCG
CAAGAATTGGCGGTCCGTAATGATTTGGTTCTTGCATTGCCGGAGAGGAT
CCAAGCAATCCCAGATGGGACCCCTGCCACACCCAAACAAACTGGAGGTT
GGGGAGCTTCTGCCTCACGTCCTGAAATTAAATTTGATTCAGATGGTCGA
TTCGATGATGGGTACTTTCAACAAACTGAAGAATCAAGTGGGTTTAGGCA
GGAGTATAAAATGCGATTAAGGTTTGGATGTGATCGCAGAAGGATTAGAT
ACTTTGAAAACATGGCACACGATATGAACGAGGAAATGGATAGGCAAGTT
CCACTGATGGATGAGATTGATACTTAG
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