Ca_03711, Ca_03711_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_03711 vs. TrEMBL
Match: G7I7H2_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_1g082370 PE=4 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.170e-37 Identity = 94/158 (59.49%), Postives = 108/158 (68.35%), Query Frame = 1 Query: 1 MGICYKLYHFITKTLASQVLKTVTLGCSTHYSSTSTAPRGSETPYEDGNDKEFSHTQGLLCDSIYSPAQQAQHKDTPCKNIDEKVRENXXXXXXXXXXKRISLRKVVSINDNVEEILPGKKNKRRIKSFQKSSSLDQ--EEEPEPLRSILKVGSDLKD 468 +GICYKLY+FITKTLASQ LKTVTLGCS YSSTSTAPRGS+ + + G+ C +KD+PC +DE V+E KRISL+K VSI DNVE+ILP KK K+R KSFQKSSSLDQ EEEP+PLRSILKVGSDL D Sbjct: 11 LGICYKLYYFITKTLASQALKTVTLGCSARYSSTSTAPRGSDC------EADKVLRLGIPC-----------NKDSPCTKVDEMVKEG-----TTRLPKRISLKKSVSICDNVEQILPNKKIKKRSKSFQKSSSLDQEEEEEPKPLRSILKVGSDLND 146
BLAST of Ca_03711 vs. TrEMBL
Match: K7LJN0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.232e-32 Identity = 90/169 (53.25%), Postives = 108/169 (63.91%), Query Frame = 1 Query: 1 MGICYKLYHFITKTLASQVLKTVTLGCSTHYSSTSTAPRG----------SETPYEDGNDKEFSHTQGLLCDSIYSPAQQAQHKDTPCKNIDEKVRENXXXXXXXXXXKRI-SLRKVVSINDNVEEILPGKKNKRR-IKSFQKSSSLDQEEEP-EPLRSILKVGSDLKD 468 MGICY+LYHF+ K LA QV KTVTLG S SS+STA R SETP E + K+ T+G++ DSI SP QQA+ K+ PC N+D+ EN S++K VSI++NVEEI P KK KR+ +SFQKS SLDQEEEP P RSILKVGSDL D Sbjct: 11 MGICYRLYHFLKKALALQVSKTVTLGRSRRDSSSSTAVRSSDSKAKRKVQSETPCEVDDGKKLPATEGVVGDSISSPVQQAEEKNKPCMNVDKMEGENAALTLPMPSLAPTRSIKKTVSISENVEEIPPPKKLKRKWSRSFQKSFSLDQEEEPIPPPRSILKVGSDLDD 179
BLAST of Ca_03711 vs. TrEMBL
Match: K7N572_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 4.683e-32 Identity = 89/169 (52.66%), Postives = 106/169 (62.72%), Query Frame = 1 Query: 1 MGICYKLYHFITKTLASQVLKTVTLGCSTHYSSTSTAPRG----------SETPYEDGNDKEFSHTQGLLCDSIYSPAQQAQHKDTPCKNIDEKVRENXXXXXXXXXXKRI-SLRKVVSINDNVEEILPGKKNKRR-IKSFQKSSSLDQEEEP-EPLRSILKVGSDLKD 468 MGICY+LYHF+TK LASQ LKTVTLGCS SS S+A R SET + + K+ T+G+ DSI S QQA+ K PC N+D+ EN S++K VSI++NVEEI P KK KR+ +SFQKS SLDQEEEP P RSILKVGSDL D Sbjct: 11 MGICYRLYHFLTKALASQALKTVTLGCSRRDSSRSSAVRSSDSNAKKEVQSETQCKVDDGKKLPPTEGVPGDSISSVQQQAEEKSKPCMNVDKMEGENAALTLPTPSLAPTRSIKKTVSISENVEEIPPPKKLKRKWSRSFQKSFSLDQEEEPISPPRSILKVGSDLND 179
BLAST of Ca_03711 vs. TrEMBL
Match: I1JRF7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 3.042e-23 Identity = 73/157 (46.50%), Postives = 96/157 (61.15%), Query Frame = 1 Query: 1 MGICYKLYHFITKTLASQVLKTVTLGCSTHYSSTSTAPRGSETPYEDGNDKEFSHTQGLLCDSIYSPAQQAQHKDTPCK--NIDEKVRENXXXXXXXXXXKRISLRKVVSINDNVEE-ILPGKKNKRRIKSFQKSSSLDQEEEPEPLRSILKVGSDL 462 +GICY+LY+FI KTLASQ +KTVTLG S+HYSS+ST ++ + +K + + K+ PC+ NIDEKV + +K+VSINDNVEE ILP KK R K+FQ+S+SLDQ+E P+PLRSILKVG+ L Sbjct: 8 LGICYRLYNFIMKTLASQAMKTVTLGRSSHYSSSSTEVEITQRGFGTNTEK------------MVLAETPCEEKNIPCRNNNIDEKV--------LMVGDLPHAPKKMVSINDNVEEIILPSKK---RSKTFQESNSLDQQEHPKPLRSILKVGAKL 141
BLAST of Ca_03711 vs. TrEMBL
Match: C6TIQ3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 3.858e-10 Identity = 54/157 (34.39%), Postives = 70/157 (44.59%), Query Frame = 1 Query: 1 MGICYKLYHFITKTLASQVLKTVTLGCSTHYSSTSTAPRGSETPYEDGNDKEFSHTQGLLCDSIYSPAQQAQHKDTPCKN-IDEKVRENXXXXXXXXXXKRISLRKVVSINDNVEEILPGKKNKRRIKSFQKSSSLDQEEEPEPLRSILKVGSDLKD 468 +GICY+LYHFI +TLASQ +KTVTLG S+HY S+ST + + + G D + P K+ PC+N IDE KVV + D LP K + PLRSILKVG++L D Sbjct: 8 LGICYRLYHFIMETLASQAMKTVTLGRSSHYDSSSTKVKITTRGF------------GANADKVVQPEIPCVEKNIPCRNSIDE---------------------KVVVVGD-----LPHAPKKMK-----------------PLRSILKVGANLND 109
BLAST of Ca_03711 vs. TrEMBL
Match: M1CSE9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400028613 PE=4 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.466e-9 Identity = 52/167 (31.14%), Postives = 81/167 (48.50%), Query Frame = 1 Query: 16 KLYHFITKTLASQVLKTVTLGCSTHYSSTSTAPRGSETPYEDGNDKEFSHTQGLLCDSIYSPAQQAQHKDTPC--------------KNIDEKVRENXXXXXXXXXXKRISLRKVVSINDNVEEILPGKKNKRRIKSFQKSSSLDQE--EEPEPLRSILKVGSDLKD 468 +LY F+ ++LA + K VTLG S +S +T+ S + + E + ++A +D P +N +K+ E + +K+VSINDNVEEI KK K++ KS +K S +E EEP+PL+SILKVGS++ + Sbjct: 51 RLYEFVVQSLADEATKPVTLGDSKGHSLVNTSQSRSNPGTGNHSTNEHVLHSEDSSSRVIPKLEEAVVEDDPVLENEESELSQVTSEENEGDKIVEEEASGPSMETQNKAP-KKMVSINDNVEEIYFSKKKKKKKKSTEKVPSNKEEVKEEPKPLKSILKVGSNVNE 216
BLAST of Ca_03711 vs. TrEMBL
Match: K4B0P9_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc01g098620.2 PE=4 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 1.621e-8 Identity = 49/168 (29.17%), Postives = 83/168 (49.40%), Query Frame = 1 Query: 16 KLYHFITKTLASQVLKTVTLGCSTHYSSTSTAPRGSETPYEDGNDKEF--------SHTQGLLCDSIYSPAQQAQHKDTPCKNIDEKVRENXXXXXXXXXXKRISL-----RKVVSINDNVEEILPGKKNKRRIK--SFQK--SSSLDQEEEPEPLRSILKVGSDLKD 468 +L+ + ++LA++ K VTLG YS +T+ S Y + + E SH L +++ +++++ + + E + +K+VSINDNVEEI KK K++ K S +K S+ + EEEP+PL+SILKVGS++ + Sbjct: 72 RLFEHLVQSLAAEATKPVTLGDPMDYSLVNTSQSRSNPGYGNHSTTEHVLHSEDSSSHVIPKLEEAVVEDDPVLENEESELSQVTSEENEGDKIVEEGASGSSMETQNKAPKKMVSINDNVEEIYFSKKKKKKNKKKSTEKVPSNKEEVEEEPKPLKSILKVGSNVNE 239
BLAST of Ca_03711 vs. TrEMBL
Match: B9MZR5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_782848 PE=4 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 1.051e-7 Identity = 47/159 (29.56%), Postives = 78/159 (49.06%), Query Frame = 1 Query: 1 MGICYKLYHFITKTLASQVLKTVTLGCSTHYSSTSTAPRGSETPYEDGNDKEFSHTQGLLCDSIYSPAQQAQHKD-----TPCKNIDEKVRENXXXXXXXXXX-KRISLRKVVSINDNVEEILPGKKNKRRIKSFQKSSSLDQEEE-PEPLRSILKVGS 456 + IC +LY+ +TK +++Q KTV LG H + T + + + + C+ + Q+ K+ + C + +++ +E K ++K+VSIND VEEI KK KR KS +K S+D EE+ +P++SILK S Sbjct: 11 LDICNRLYNLVTKIVSAQAFKTVKLGHPVHQNLAKTQNGAIHEGDHEVHPRTTDQGEEPGCEDV---KQEDSLKNWDAFASSCSSSNDREQEEAPLPYSLVAQAKPAKIKKMVSINDRVEEIGTRKKMKRSWKSTEKLPSIDLEEDIVQPVKSILKKDS 166
BLAST of Ca_03711 vs. TrEMBL
Match: Q2HTP2_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_7g113870 PE=4 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 5.214e-7 Identity = 45/132 (34.09%), Postives = 66/132 (50.00%), Query Frame = 1 Query: 1 MGICYKLYHFITKTLASQVLKTVTLGCSTHYSSTSTAPRGSE------TPYEDGNDKEFSHTQGLLCDSIYSP-AQQAQHKDTPCKNI-DEKVRENXXXXXXXXXXKRISLRKVVSINDNVEEILPGKKNKR 372 + ICYKLY FI K L++Q KTVTLG S++Y S+S S+ TP N E ++ D+ SP + + ++ C+NI DE++ + +K+VSIND EEI+ KR Sbjct: 11 VNICYKLYDFIMKILSAQASKTVTLGRSSNYGSSSLGVPISDKMVRHVTPCIGLNSNELRKSKYFFGDNRLSPQTEHVEEENNLCRNIVDEELCHQ-------------ASKKMVSINDMAEEIILTSTKKR 129
BLAST of Ca_03711 vs. TrEMBL
Match: B9RF12_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1430300 PE=4 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 5.214e-7 Identity = 52/161 (32.30%), Postives = 71/161 (44.10%), Query Frame = 1 Query: 1 MGICYKLYHFITKTLASQVLKTVTLGCSTHYSSTSTAPRGSETPYEDGNDKEFSHT---QGLLCDSIYSPAQQAQHKDTPCKNIDEKVRENXXXXXXXXXXKRISL------RKVVSINDNVEEILPGKKNKRRIKSFQKSSSLDQEEEPEPLRSILKVGS 456 +GIC +LY+FI K L K+V LG + S T ET + ND +H+ + L + A + D + DE K +K VSI+D VEEI KK +R+ ++EEEP+PLRSILKVGS Sbjct: 12 LGICNRLYNFIKKLLLMHAYKSVILGDPLYRDSAET-----ETKAANEND-HMAHSKPQEEKLSEVAEDQAHNMNNSDPSVQLSDELTAFQDNNDNVIEPGKEPEAVEAKPPKKSVSISDRVEEIDTRKKIRRKKSKENLILVEEEEEEPKPLRSILKVGS 166 The following BLAST results are available for this feature:
BLAST of Ca_03711 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 10
BLAST of Ca_03711 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_03711_v1.0_kabuli ID=Ca_03711_v1.0_kabuli; Name=Ca_03711; organism=Cicer arietinum; type=mRNA; length=471bpback to top protein sequence of Ca_03711_v1.0_kabuli >Ca_03711_v1.0_kabuli ID=Ca_03711_v1.0_kabuli; Name=Ca_03711_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=156bpback to top mRNA from alignment at Ca4:5436533..5437003- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_03711_v1.0_kabuli ID=Ca_03711_v1.0_kabuli; Name=Ca_03711; organism=Cicer arietinum; type=mRNA; length=471bp; location=Sequence derived from: Ca4:5436533..5437003- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca4:5436533..5437003- >Ca_03711_v1.0_kabuli ID=Ca_03711_v1.0_kabuli; Name=Ca_03711; organism=Cicer arietinum; type=CDS; length=471bp; location=Sequence derived from: Ca4:5436533..5437003- (Cicer arietinumback to top |