Ca_23890, Ca_23890_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_23890 vs. TrEMBL
Match: B7FGN6_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_7g083930 PE=2 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 8.222e-71 Identity = 146/195 (74.87%), Postives = 157/195 (80.51%), Query Frame = 1 Query: 1 MACTIDFRSLDEGFGGKTYKRKREQAQAIEDAKMEEISTMETXXXXXXXXXXKRSALPSQSDPNKPVF-----GAPSYDGVIAGKVSGRKWKQARTRRASSVQV-KKGTTFEERAREKRIKTAFKERITELKEEIRSNKVXXXXXXXXXXXXXXXNILKSGTKFQKITNPKTLKKIAKSKQRKQLRLVPDDLVKK 567 MACTIDFR LDEGFGGKTYKRKREQAQAIEDAKMEEI +MET KRSALPS SDPNKP F GAP+YDGVIAGKVSGRKWKQ RTRRAS++QV KKGTTFEERAREKRIKTA+KE++TELKE IR NKV N+LKSGTKFQKITNPKTLKKIAKSKQRKQLR+VPDD++KK Sbjct: 1 MACTIDFRHLDEGFGGKTYKRKREQAQAIEDAKMEEIVSMETDDTAPPPA--KRSALPSLSDPNKPTFSAVSFGAPTYDGVIAGKVSGRKWKQVRTRRASALQVSKKGTTFEERAREKRIKTAYKEKMTELKEAIRMNKVEKRKKREESEKRKKENVLKSGTKFQKITNPKTLKKIAKSKQRKQLRMVPDDMIKK 193
BLAST of Ca_23890 vs. TrEMBL
Match: I1MLA5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 6.112e-58 Identity = 126/195 (64.62%), Postives = 144/195 (73.85%), Query Frame = 1 Query: 1 MACTIDFRSLDEGFGGKTYKRKREQ-AQAIEDAKMEEI----STMETXXXXXXXXXXKRSALPSQSDPNKPVFGAPSYDGVIAGKVSGRKWKQARTRRASSVQV-KKGTTFEERAREKRIKTAFKERITELKEEIRSNKVXXXXXXXXXXXXXXXNILKSGTKFQKITNPKTLKKIAKSKQRKQLRLVPDDLVKK 567 MACTIDFR LDEGFGGKTYKRKREQ +Q DA +++ S M+T KRSALPS +P+KP FG PSYDGVIAG+VSGRKWKQ R RRAS+ QV +KGTTFE+R REK IK A+KER+ ELKEEIR NKV NI++SGTKFQKITNP TLKKIAKSKQRKQLR+VPD+LV+K Sbjct: 1 MACTIDFRCLDEGFGGKTYKRKREQQSQPQHDAAADDVIDGASLMDTDDALPPPA--KRSALPSSENPDKPAFGHPSYDGVIAGRVSGRKWKQVRQRRASAAQVSRKGTTFEQREREKVIKKAYKERMMELKEEIRLNKVEKRKKKEEREKKKQENIIRSGTKFQKITNPNTLKKIAKSKQRKQLRVVPDELVRK 193
BLAST of Ca_23890 vs. TrEMBL
Match: I1N804_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 5.720e-56 Identity = 121/192 (63.02%), Postives = 140/192 (72.92%), Query Frame = 1 Query: 1 MACTIDFRSLDEGFGGKTYKRKREQAQAIE--DAKMEEISTMETXXXXXXXXXXKRSALPSQSDPNKPVFGAPSYDGVIAGKVSGRKWKQARTRRASSVQV-KKGTTFEERAREKRIKTAFKERITELKEEIRSNKVXXXXXXXXXXXXXXXNILKSGTKFQKITNPKTLKKIAKSKQRKQLRLVPDDLVKK 567 MACTIDFR LDEGFGGKTYKRKREQ + D ++ S M+T KRSA+PS +P+KPVFG SYDGVIAG+VSGRKWKQ R RAS+ QV +KGTTFE+R REK IK A+KER+ ELKEEIR NKV NI++SGTKFQKITNP TLKKIAKSKQRKQLR+VPD+L++K Sbjct: 1 MACTIDFRCLDEGFGGKTYKRKREQQSQPQHDDNAIDGASLMDTDDALPPPA--KRSAVPSSENPDKPVFGQASYDGVIAGRVSGRKWKQVRQHRASAAQVSRKGTTFEQREREKVIKKAYKERMMELKEEIRLNKVEKRKKREEREKKKQENIIRSGTKFQKITNPNTLKKIAKSKQRKQLRVVPDELLRK 190
BLAST of Ca_23890 vs. TrEMBL
Match: B9RGY8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1445430 PE=4 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 5.354e-54 Identity = 115/190 (60.53%), Postives = 131/190 (68.95%), Query Frame = 1 Query: 1 MACTIDFRSLDEGFGGKTYKRKREQAQAIEDAKMEEISTMETXXXXXXXXXXKRSALPSQSDPNKPVFGAPSYDGVIAGKVSGRKWKQARTRRASSVQVK-KGTTFEERAREKRIKTAFKERITELKEEIRSNKVXXXXXXXXXXXXXXXNILKSGTKFQKITNPKTLKKIAKSKQRKQLRLVPDDLVKK 567 MACTIDFR LDEGFGGKTYKRKRE + + ++ME KRSAL S +PNKPV+G P+YDGVIAG+ SGRKWKQ R +RAS+ V KGTTFEER R+K IK A++ERI ELKEEIR NK NILKSGTK QKITNPKTLKKI+KSK RK L+LVPDDLV + Sbjct: 1 MACTIDFRCLDEGFGGKTYKRKRESQFQSQSQSGNDDASMEIDESTVVPPPAKRSALESTENPNKPVYGNPTYDGVIAGRASGRKWKQVRKQRASAKHVSVKGTTFEERERQKEIKKAYRERINELKEEIRRNKQEKRKQREEREKKKQENILKSGTKLQKITNPKTLKKISKSKDRKLLKLVPDDLVNR 190
BLAST of Ca_23890 vs. TrEMBL
Match: M1DBH6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400035897 PE=4 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 6.545e-52 Identity = 113/193 (58.55%), Postives = 131/193 (67.88%), Query Frame = 1 Query: 1 MACTIDFRSLDEGFGGKTYKRKR---EQAQAIEDAKMEEISTMETXXXXXXXXXXKRSALPSQSDPNKPVFGAPSYDGVIAGKVSGRKWKQARTRRASSVQVK-KGTTFEERAREKRIKTAFKERITELKEEIRSNKVXXXXXXXXXXXXXXXNILKSGTKFQKITNPKTLKKIAKSKQRKQLRLVPDDLVKK 567 MACT+DFR LDEGFGGKTYKRKR EQ IED + + E KR A+PS+ DPNKPV G P+YDGVIAG+VSGR WKQ R R+S+ +V KG + E+R +EK IK A+KERI ELKEEIR NKV NILKSGTK QKITNPKTLKKIAKSKQRK L++V DDL+ + Sbjct: 1 MACTVDFRCLDEGFGGKTYKRKRAEKEQGNGIEDGEAAAMEVEEIPR--------KRQAVPSEEDPNKPVLGRPTYDGVIAGRVSGRNWKQPRKHRSSAAKVSVKGKSLEQRMKEKEIKKAYKERINELKEEIRQNKVEKRKQREEREKKKQENILKSGTKVQKITNPKTLKKIAKSKQRKLLKVVSDDLLNR 185
BLAST of Ca_23890 vs. TrEMBL
Match: A9PFB0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_572880 PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 8.548e-52 Identity = 119/195 (61.03%), Postives = 133/195 (68.21%), Query Frame = 1 Query: 1 MACTIDFRSLDEGFGGKTYKRKRE----QAQAIEDAKMEEISTMETXXXXXXXXXXKRSALPSQSDPNKPV-FGAPSYDGVIAGKVSGRKWKQARTRRASSVQV-KKGTTFEERAREKRIKTAFKERITELKEEIRSNKVXXXXXXXXXXXXXXXNILKSGTKFQKITNPKTLKKIAKSKQRKQLRLVPDDLVKK 567 MACTIDFR LDEGFGGKTYKRKRE Q A DA ME KR+A+PS +P+KPV G P+YDGV+AGKVSGRKWKQ R +RAS+ QV K+GT +EER REK IK A++ER ELKEEIR NKV NILKSGTK QKITNPKTLKKIAKSK RK L++VPDDLV K Sbjct: 1 MACTIDFRRLDEGFGGKTYKRKREEEALQLTATTDASME-----------IDAPAAKRTAIPSSDNPDKPVAVGKPTYDGVMAGKVSGRKWKQPRKQRASAKQVSKRGTRYEERDREKEIKKAYRERKNELKEEIRKNKVEKRKMREEREKRKQDNILKSGTKLQKITNPKTLKKIAKSKDRKLLKVVPDDLVNK 184
BLAST of Ca_23890 vs. TrEMBL
Match: M5VR36_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011661mg PE=4 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 9.451e-51 Identity = 112/191 (58.64%), Postives = 131/191 (68.59%), Query Frame = 1 Query: 1 MACTIDFRSLDEGFGGKTYKRKRE-QAQAIEDAKMEEISTMETXXXXXXXXXXKRSALPSQSDPNKPVFGAPSYDGVIAGKVSGRKWKQARTRRASSVQVK-KGTTFEERAREKRIKTAFKERITELKEEIRSNKVXXXXXXXXXXXXXXXNILKSGTKFQKITNPKTLKKIAKSKQRKQLRLVPDDLVKK 567 MACTIDFR LDEGFGGKTYKRKR + A EDA + KRSA+PS +P+KP FG PSYDGVIAG+VSGRKWKQ R +RAS+ QV KGTTFEERA+EK IK A++ER+ ELK +I+ NK NIL+SGTK Q I+NPKTLKKIAKSK RK L++VPDDL+ K Sbjct: 1 MACTIDFRRLDEGFGGKTYKRKRNPEPTANEDALVFGPVGAAMEIDDTCLPPSKRSAVPSSDNPDKPSFGKPSYDGVIAGRVSGRKWKQPRKQRASATQVSHKGTTFEERAKEKEIKRAYRERMAELKGDIKKNKEEKRKKKEERDKKKQENILRSGTKLQVISNPKTLKKIAKSKDRKLLKVVPDDLINK 191
BLAST of Ca_23890 vs. TrEMBL
Match: K4BDP4_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc02g094490.2 PE=4 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 2.750e-50 Identity = 112/193 (58.03%), Postives = 130/193 (67.36%), Query Frame = 1 Query: 1 MACTIDFRSLDEGFGGKTYKRKR---EQAQAIEDAKMEEISTMETXXXXXXXXXXKRSALPSQSDPNKPVFGAPSYDGVIAGKVSGRKWKQARTRRASSVQVK-KGTTFEERAREKRIKTAFKERITELKEEIRSNKVXXXXXXXXXXXXXXXNILKSGTKFQKITNPKTLKKIAKSKQRKQLRLVPDDLVKK 567 MACT+DFR LDEGFGGKTYKRKR EQ IE ++EEI KR A+PS+ DPNKPV G P+YDGVIAG+VSGR WKQ R R+S+ +V KG + E+R +EK IK A+KERI ELKE IR NKV NILKSGTK QKITNPKTLKKIAKSKQRK L++V D L+ + Sbjct: 8 MACTVDFRCLDEGFGGKTYKRKRAEKEQGNGIEAMEVEEIPR-------------KRQAVPSEEDPNKPVLGRPTYDGVIAGRVSGRNWKQPRKHRSSAAKVSVKGKSLEQRMKEKEIKKAYKERINELKEVIRHNKVEKRKQREEREKKKQENILKSGTKVQKITNPKTLKKIAKSKQRKLLKVVSDHLLNR 187
BLAST of Ca_23890 vs. TrEMBL
Match: B9GNF3_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_409678 PE=4 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 3.971e-49 Identity = 113/189 (59.79%), Postives = 131/189 (69.31%), Query Frame = 1 Query: 1 MACTIDFRSLDEGFGGKTYKRKREQAQAIEDAKMEEISTMETXXXXXXXXXXKRSALPSQSDPNKPV-FGAPSYDGVIAGKVSGRKWKQARTRRASSVQV-KKGTTFEERAREKRIKTAFKERITELKEEIRSNKVXXXXXXXXXXXXXXXNILKSGTKFQKITNPKTLKKIAKSKQRKQLRLVPDDLV 561 MACTID R LDEGFGGKTYKRKRE +A++ E +T KRSA+PS +P+KPV G P+YDGVIAGKVSGR WKQ R +RAS+ QV K+GT FEER +EK IK A++ER ELKEEIR NKV NIL+SGTK QKITNPKTLKKIAKSK RK L++VPD+LV Sbjct: 1 MACTIDLRFLDEGFGGKTYKRKREH-EALQLITTE--ATTADASMEIDAPPAKRSAIPSTDNPDKPVAVGKPTYDGVIAGKVSGRNWKQPRKQRASAKQVSKRGTNFEERQKEKEIKKAYRERKNELKEEIRKNKVEKRKMREEREKRKQENILRSGTKLQKITNPKTLKKIAKSKDRKLLKVVPDELV 186
BLAST of Ca_23890 vs. TrEMBL
Match: F6H433_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0068g01180 PE=4 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 3.361e-48 Identity = 110/190 (57.89%), Postives = 127/190 (66.84%), Query Frame = 1 Query: 1 MACTIDFRSLDEGFGGKTYKRKREQAQAIEDAKMEEISTMETXXXXXXXXXXKRSALPSQSDPNKPVFGAPSYDGVIAGKVSGRKWKQARTRRASSVQVK-KGTTFEERAREKRIKTAFKERITELKEEIRSNKVXXXXXXXXXXXXXXXNILKSGTKFQKITNPKTLKKIAKSKQRKQLRLVPDDLVKK 567 MACTIDFR LDEG GG+ KRKR I D ME KR A+PS +P+KP YDG+IAGKVSGRKWKQ R +R+S+ +V KGTTFE+RA++K IK A+KER+TELKEEIR+NKV NILKSGTK Q I+NPKTLKKIAKSKQRKQL+LVPD LVKK Sbjct: 1 MACTIDFRCLDEGLGGQKNKRKRSSETEINDVSME---IDNDNNDDASAPSAKRQAIPSSENPDKP-----KYDGIIAGKVSGRKWKQPRKQRSSASKVSLKGTTFEQRAKQKEIKKAYKERMTELKEEIRTNKVEKRKKREEREKRKQENILKSGTKLQIISNPKTLKKIAKSKQRKQLKLVPDSLVKK 182 The following BLAST results are available for this feature:
BLAST of Ca_23890 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25 Position : 0 Zoom : x 1
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BLAST of Ca_23890 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_23890_v1.0_kabuli ID=Ca_23890_v1.0_kabuli; Name=Ca_23890; organism=Cicer arietinum; type=mRNA; length=570bpback to top protein sequence of Ca_23890_v1.0_kabuli >Ca_23890_v1.0_kabuli ID=Ca_23890_v1.0_kabuli; Name=Ca_23890_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=189bpback to top mRNA from alignment at Ca3:25686544..25687113+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_23890_v1.0_kabuli ID=Ca_23890_v1.0_kabuli; Name=Ca_23890; organism=Cicer arietinum; type=mRNA; length=570bp; location=Sequence derived from: Ca3:25686544..25687113+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca3:25686544..25687113+ >Ca_23890_v1.0_kabuli ID=Ca_23890_v1.0_kabuli; Name=Ca_23890; organism=Cicer arietinum; type=CDS; length=570bp; location=Sequence derived from: Ca3:25686544..25687113+ (Cicer arietinumback to top |