Ca_03473, Ca_03473_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_03473 vs. TrEMBL
Match: I3SMD1_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 4.365e-62 Identity = 121/160 (75.62%), Postives = 139/160 (86.88%), Query Frame = 1 Query: 1 MHSIKILSIFVVFLLTLRS-SSCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNS-LRLNGDV 474 M+S+K + I ++ L S SSC+LIE LS YD+LMEYGFP GLLPK AIGYSLN+ETG+F+VYF+K CSF IESYTL+YKSTI+GVISQNRLYKLKGV+V+IL+LWLNIVEVSR G+DIDFSVGITSA FGVENFLE PQCGCGFDCN+ LRLNGDV Sbjct: 1 MYSLKSVLILLISLTISSSLSSCTLIEPKNLSAYDLLMEYGFPMGLLPKGAIGYSLNRETGQFSVYFEKTCSFVIESYTLSYKSTISGVISQNRLYKLKGVSVRILLLWLNIVEVSRKGNDIDFSVGITSAGFGVENFLECPQCGCGFDCNNILRLNGDV 160
BLAST of Ca_03473 vs. TrEMBL
Match: C6T0U9_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 2.395e-60 Identity = 120/159 (75.47%), Postives = 133/159 (83.65%), Query Frame = 1 Query: 1 MHSIKILSIFVVFLLTLRSSSCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLRLNGDVS 477 M SI+ L I +V L ++SC+L + KLS YDVLMEYGFP GLLPK AIGYSLN+++GEFAVYF ACSF IESYTL YKSTITGVIS+ RLY LKGVTVKIL+LWLNIVEVSR G+DI FSVGI SADFGVENFLESPQCGCGFDC +L LNGDVS Sbjct: 1 MSSIRFLWILMVSL----TASCALSQPQKLSAYDVLMEYGFPVGLLPKGAIGYSLNRDSGEFAVYFQGACSFDIESYTLKYKSTITGVISKGRLYNLKGVTVKILLLWLNIVEVSRQGNDIYFSVGIASADFGVENFLESPQCGCGFDCKTLPLNGDVS 155
BLAST of Ca_03473 vs. TrEMBL
Match: G7IEM1_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_1g088260 PE=4 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 3.128e-60 Identity = 118/157 (75.16%), Postives = 136/157 (86.62%), Query Frame = 1 Query: 1 MHSIKILSIFVVFLLTLRS-SSCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNS-LRLN 465 M+S+K + I ++ L S SSC+LIE LS YD+LMEYGFP GLLPK AIGYSLN+ETG+F+VYF+K CSF IESYTL+YKSTI+GVISQNRLYKLKGV+V+IL+LWLNIVEVSR G+DIDFSVGITSA FGVENFLE PQCGCGFDCN+ LRLN Sbjct: 1 MYSLKSVLILLISLTISSSLSSCTLIEPKNLSAYDLLMEYGFPMGLLPKGAIGYSLNRETGQFSVYFEKTCSFVIESYTLSYKSTISGVISQNRLYKLKGVSVRILLLWLNIVEVSRKGNDIDFSVGITSAGFGVENFLECPQCGCGFDCNNILRLN 157
BLAST of Ca_03473 vs. TrEMBL
Match: I1JBK4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 6.969e-60 Identity = 119/158 (75.32%), Postives = 132/158 (83.54%), Query Frame = 1 Query: 1 MHSIKILSIFVVFLLTLRSSSCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLRLNGDV 474 M SI+ L I VV L ++SC+L + KLS YDVLMEYGFP GLLPK AIGYSLN+++GEFAVYF+ ACSF IESY L YKSTITGVIS+ RLY LKGVTVKIL+LWLNIVEVSR G+DI FSVGI SADFGVENFLESPQCGCGFDC +L LNGDV Sbjct: 2 MSSIRFLWILVVCL----TASCALSQPQKLSAYDVLMEYGFPVGLLPKGAIGYSLNRDSGEFAVYFEGACSFDIESYALKYKSTITGVISKGRLYNLKGVTVKILLLWLNIVEVSRQGNDIYFSVGIASADFGVENFLESPQCGCGFDCKTLPLNGDV 155
BLAST of Ca_03473 vs. TrEMBL
Match: C6T1N4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 7.705e-59 Identity = 117/158 (74.05%), Postives = 130/158 (82.28%), Query Frame = 1 Query: 1 MHSIKILSIFVVFLLTLRSSSCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLRLNGDV 474 M SI+ L VV L ++SC+L + KLS YDVLMEYGFP GLLPK AIGYSLN+++GEFAVYF+ ACSF IESY L YKSTITGVIS+ RLY LKGVTVKIL+LWLNIVEVSR G+DI FS GI SADFGVENFLESPQCGCGFDC +L LNGDV Sbjct: 2 MSSIRFLWTLVVCL----TASCALSQPQKLSAYDVLMEYGFPVGLLPKGAIGYSLNRDSGEFAVYFEGACSFDIESYALKYKSTITGVISKGRLYNLKGVTVKILLLWLNIVEVSRQGNDIYFSAGIASADFGVENFLESPQCGCGFDCKTLPLNGDV 155
BLAST of Ca_03473 vs. TrEMBL
Match: I3TAG6_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 1.078e-52 Identity = 103/161 (63.98%), Postives = 127/161 (78.88%), Query Frame = 1 Query: 1 MHSIKILSIFVVFLLTLRSSSCSLIEA-NKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLRLNGDVSS 480 M IK L I V L S + +L E NKL+ YDV+ EYGFP GLLP A+GYSLN++TGEFAVYFD +C+F IESY L+YK TITGVI+ RLYKLKGV+V++L+LWL+IVEV G D++FSVGI SA+FGV+NF ESPQCGCGFDCN+L LNG++S+ Sbjct: 1 MSPIKFLWIVAVSLTAASSRAAALSEPENKLTAYDVMQEYGFPVGLLPIGALGYSLNRQTGEFAVYFDGSCNFNIESYRLSYKRTITGVITNGRLYKLKGVSVRVLLLWLDIVEVKIRGGDVEFSVGIASANFGVDNFYESPQCGCGFDCNNLLLNGELSA 161
BLAST of Ca_03473 vs. TrEMBL
Match: I1K106_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 202.986 bits (515), Expect = 2.935e-50 Identity = 100/139 (71.94%), Postives = 111/139 (79.86%), Query Frame = 1 Query: 61 SCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLRLNGDVS 477 SC L + KLS YDVLMEYGF GLLPK AIGYSLN++ +F VYF ACSF IESYTL YKSTITGVIS+ RLY LKGV KIL+LWLNI +VS G++I FS+ ITS DFGV+NFLESPQCGCGFDC L LNGDVS Sbjct: 7 SCVLSQPQKLSAYDVLMEYGFLVGLLPKGAIGYSLNRDNDKFVVYFQGACSFDIESYTLKYKSTITGVISKGRLYNLKGVIAKILLLWLNITKVSCQGNNIYFSIEITSVDFGVKNFLESPQCGCGFDCKPLPLNGDVS 145
BLAST of Ca_03473 vs. TrEMBL
Match: I3SCG7_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 1.507e-46 Identity = 94/148 (63.51%), Postives = 114/148 (77.03%), Query Frame = 1 Query: 1 MHSIKILSIFVVFLLTLRSSSCSLIEA-NKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGF 441 M IK L I V L S + +L E NKL+ YDV+ EYGFP GLLP A+GYSLN++TGEFAVYFD +C+F IESY L+YK ITGVI+ RLYKLKGV+V++L+LWL+IVEV G D++FSVGI SA+FGV+NF ESPQCGCGF Sbjct: 1 MSPIKFLWIVAVSLTAASSRAAALSEPENKLTAYDVMQEYGFPVGLLPIGALGYSLNRQTGEFAVYFDGSCNFNIESYRLSYKRAITGVITNGRLYKLKGVSVRVLLLWLDIVEVKIRGGDVEFSVGIASANFGVDNFYESPQCGCGF 148
BLAST of Ca_03473 vs. TrEMBL
Match: I1JQM7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 1.011e-42 Identity = 87/155 (56.13%), Postives = 110/155 (70.97%), Query Frame = 1 Query: 31 VVFLLTLRSSSCSLIEA----NKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLRLNGDVSSI 483 + F+ L S S ++ E+ +LS Y+VL +Y P GLLPK A GY LN++ G F Y + C F+IESY L YKSTI GVIS+ +L KLKG++VKI +LWL IVEV+R GDD+ FSVG+ SA F V++F ESPQCGCGFDCN NGDVSS+ Sbjct: 7 IAFICILASVSVTISESLSQQEQLSAYEVLEKYDLPVGLLPKGATGYELNEKNGHFTAYLNGTCYFSIESYELKYKSTIKGVISKGKLSKLKGISVKIEVLWLKIVEVTRDGDDLQFSVGVASAGFSVDSFSESPQCGCGFDCNYFNQNGDVSSL 161
BLAST of Ca_03473 vs. TrEMBL
Match: K4CVA0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc09g075230.1 PE=4 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 5.017e-42 Identity = 86/158 (54.43%), Postives = 112/158 (70.89%), Query Frame = 1 Query: 1 MHSIKILSIFVVFLLTLRSSSCSLIEANKLSP--YDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLRLNG 468 M S+ + ++ LL L ++S + + + SP Y++L EY FP G+LPK Y L+K TG FAVYF+K+CSF+I Y L Y S ITG IS++RL LKGV VK+L+ W+NIVEV+R GDD+DFSVGI SADF ++NF ESPQCGCGFDC + NG Sbjct: 1 MPSVALPLCILLLLLQLSAASPVVGDEDSQSPTAYEILQEYDFPVGILPKGVTRYELDKTTGNFAVYFNKSCSFSISGYNLKYMSKITGKISKDRLANLKGVQVKVLLFWINIVEVTRDGDDLDFSVGIASADFAIDNFYESPQCGCGFDCVNSGENG 158 The following BLAST results are available for this feature:
BLAST of Ca_03473 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25 Position : 0 Zoom : x 1
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BLAST of Ca_03473 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_03473_v1.0_kabuli ID=Ca_03473_v1.0_kabuli; Name=Ca_03473; organism=Cicer arietinum; type=mRNA; length=486bpback to top protein sequence of Ca_03473_v1.0_kabuli >Ca_03473_v1.0_kabuli ID=Ca_03473_v1.0_kabuli; Name=Ca_03473_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=161bpback to top mRNA from alignment at Ca4:7688630..7689115+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_03473_v1.0_kabuli ID=Ca_03473_v1.0_kabuli; Name=Ca_03473; organism=Cicer arietinum; type=mRNA; length=486bp; location=Sequence derived from: Ca4:7688630..7689115+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca4:7688630..7689115+ >Ca_03473_v1.0_kabuli ID=Ca_03473_v1.0_kabuli; Name=Ca_03473; organism=Cicer arietinum; type=CDS; length=486bp; location=Sequence derived from: Ca4:7688630..7689115+ (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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