Ca_03507, Ca_03507_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_03507 vs. SwissProt
Match: USPAL_ARATH (Universal stress protein A-like protein OS=Arabidopsis thaliana GN=At3g01520 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.214e-12 Identity = 46/166 (27.71%), Postives = 80/166 (48.19%), Query Frame = 1 Query: 1 MEKKERKIMVAVDESEESMF---------ALSWSITNLISDTNNNSKLLLLYVKPPSAVYSLDSAGYIFSNETIHALQKYSTELATSVMKRAEAICTNFDATNIKIEKVVGTGDAKNVICSATKKLEADTLVMGSHGYGFFKRALLGSVSDHCVKYAKCPVVIVKQ 471 M + K+MVAV+ S + A W++ ++ ++ K+LLL+V+ D S E +++ + ++ E + E + TGD K+VIC K++ D LV+GS G G F++ +G+VS CVK+A+CPV+ +K+ Sbjct: 1 MGSEPTKVMVAVNASTIKDYPNPSISCKRAFEWTLEKIVRSNTSDFKILLLHVQVVDEDGFDDVDSIYASPEDFRDMRQSNKAKGLHLL---EFFVNKCHEIGVGCEAWIKTGDPKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAECPVMTIKR 163
BLAST of Ca_03507 vs. SwissProt
Match: Y531_METJA (Universal stress protein MJ0531 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0531 PE=3 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 5.277e-8 Identity = 47/157 (29.94%), Postives = 78/157 (49.68%), Query Frame = 1 Query: 4 EKKERKIMVAVDESEESMFALSWSITNLISDTNNNSKLLLLYVKPPSAVYSLDSAGYIFSNETIHALQKYSTELATSVMKRAEAICTNFDATNIKIEKVVGTGDAKNVICSATKKLEADTLVMGSHGYGFFKRALLGSVSDHCVKYAKCPVVIVKQP 474 E +KI++ D S+ S+ A +I N+ + + +++ +YV S L + G S E I L K + A +K+ + +KI + G N I +K +AD +VMG+ G +R LLGSV++ +K A CPV++VK+P Sbjct: 23 ENLYKKIVIPTDGSDVSLEAAKHAI-NIAKEFD--AEVYAIYVVDVSPFVGLPAEG---SWELISELLKEEGQEALKKVKKMA------EEWGVKIHTEMLEGVPANEIVEFAEKKKADLIVMGTTGKTGLERILLGSVAERVIKNAHCPVLVVKKP 167
BLAST of Ca_03507 vs. TrEMBL
Match: G7IDR7_MEDTR (Universal stress protein A-like protein OS=Medicago truncatula GN=MTR_1g087200 PE=4 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 8.338e-69 Identity = 132/158 (83.54%), Postives = 146/158 (92.41%), Query Frame = 1 Query: 1 MEKKERKIMVAVDESEESMFALSWSITNLISDTNNNSKLLLLYVKPPSAVYSLDSAGYIFSNETIHALQKYSTELATSVMKRAEAICTNFDATNIKIEKVVGTGDAKNVICSATKKLEADTLVMGSHGYGFFKRALLGSVSDHCVKYAKCPVVIVKQP 474 MEK+ERKIMVA+DESEESM+ALSWSI+NLI+DTNNN+KL+LLYVKPPSAVYSLDSAGYIFSN+TI L+ YS++LA SVMKRAEAI NFD T+I IEKVVGTGDAKNVIC+A KKL ADTLVMGSHGYGF KRALLGSVSD+CVK AKCPVVIVKQP Sbjct: 1 MEKRERKIMVAIDESEESMYALSWSISNLIADTNNNNKLVLLYVKPPSAVYSLDSAGYIFSNDTIDTLENYSSQLAKSVMKRAEAIYRNFDDTDINIEKVVGTGDAKNVICNAAKKLGADTLVMGSHGYGFIKRALLGSVSDYCVKNAKCPVVIVKQP 158
BLAST of Ca_03507 vs. TrEMBL
Match: C6SZS5_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 1.989e-62 Identity = 121/158 (76.58%), Postives = 139/158 (87.97%), Query Frame = 1 Query: 1 MEKKERKIMVAVDESEESMFALSWSITNLISDTNNNSKLLLLYVKPPSAVYSLDSAGYIFSNETIHALQKYSTELATSVMKRAEAICTNFDATNIKIEKVVGTGDAKNVICSATKKLEADTLVMGSHGYGFFKRALLGSVSDHCVKYAKCPVVIVKQP 474 MEKKERKIMVAVDES+ESM ALSW ITNLIS+TN KL+LLYV+PPSA YSLD+AGY FS++ + A++KYS LA SVM+RAEA+C + +ATNI +E+VVG G AKNVICSA KKLEADTLVMG+HGYGFFKRALLGSVSDHC K+AKCPVVIVKQP Sbjct: 9 MEKKERKIMVAVDESQESMHALSWCITNLISETN---KLVLLYVRPPSAFYSLDAAGYNFSSDVVDAMEKYSMHLANSVMERAEAVCRDLNATNINMERVVGVGHAKNVICSAVKKLEADTLVMGTHGYGFFKRALLGSVSDHCAKHAKCPVVIVKQP 163
BLAST of Ca_03507 vs. TrEMBL
Match: I3T5G2_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 9.873e-62 Identity = 121/162 (74.69%), Postives = 140/162 (86.42%), Query Frame = 1 Query: 1 MEKKERKIMVAVDESEESMFALSWSITNLISDTNNNSK----LLLLYVKPPSAVYSLDSAGYIFSNETIHALQKYSTELATSVMKRAEAICTNFDATNIKIEKVVGTGDAKNVICSATKKLEADTLVMGSHGYGFFKRALLGSVSDHCVKYAKCPVVIVKQP 474 ME KERK +VAVDES+ESM ALSW I+NLIS+ NNN+K L+LLYV+PPSAVYSLD+AGYIFS++ I A++KY+ +LA SVM+RAE IC N +A+NIK+EKVVGTGDAKNVICSA KKL ADTLV+GSH YGFFKRALLGSVSDHC K AKCPVVIVK P Sbjct: 1 METKERKTLVAVDESKESMHALSWCISNLISENNNNNKIHNNLVLLYVRPPSAVYSLDAAGYIFSDDMIDAIEKYNMQLANSVMRRAEDICGNLNASNIKVEKVVGTGDAKNVICSAVKKLGADTLVLGSHDYGFFKRALLGSVSDHCAKNAKCPVVIVKHP 162
BLAST of Ca_03507 vs. TrEMBL
Match: I3RZZ8_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 2.199e-61 Identity = 120/162 (74.07%), Postives = 139/162 (85.80%), Query Frame = 1 Query: 1 MEKKERKIMVAVDESEESMFALSWSITNLISDTNNNSK----LLLLYVKPPSAVYSLDSAGYIFSNETIHALQKYSTELATSVMKRAEAICTNFDATNIKIEKVVGTGDAKNVICSATKKLEADTLVMGSHGYGFFKRALLGSVSDHCVKYAKCPVVIVKQP 474 ME KERK +VAVDES+ESM ALSW I+NLIS+ NNN+K L+LLYV+PPS VYSLD+AGYIFS++ I A++KY+ +LA SVM+RAE IC N +A+NIK+EKVVGTGDAKNVICSA KKL ADTLV+GSH YGFFKRALLGSVSDHC K AKCPVVIVK P Sbjct: 1 METKERKTLVAVDESKESMHALSWCISNLISENNNNNKIHNNLILLYVRPPSVVYSLDAAGYIFSDDMIDAIEKYNMQLANSVMRRAEDICGNLNASNIKVEKVVGTGDAKNVICSAVKKLGADTLVLGSHDYGFFKRALLGSVSDHCAKNAKCPVVIVKHP 162
BLAST of Ca_03507 vs. TrEMBL
Match: I1JBG7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 6.399e-61 Identity = 119/158 (75.32%), Postives = 137/158 (86.71%), Query Frame = 1 Query: 1 MEKKERKIMVAVDESEESMFALSWSITNLISDTNNNSKLLLLYVKPPSAVYSLDSAGYIFSNETIHALQKYSTELATSVMKRAEAICTNFDATNIKIEKVVGTGDAKNVICSATKKLEADTLVMGSHGYGFFKRALLGSVSDHCVKYAKCPVVIVKQP 474 MEKKERKIMVAVDES+ESM+ALS ITNLIS TN KLLLLYV+PPSA YSLD+AGY FS++ + A++KYS LA SVM+RAEA+C + +ATNI +E+V+G G AKNVICSA KKLEADTLVMG+HGYGF KRALLGSVSDHC K+AKCPVVIVKQP Sbjct: 1 MEKKERKIMVAVDESQESMYALSCCITNLISQTN---KLLLLYVRPPSAFYSLDAAGYHFSSDVVDAMEKYSMHLANSVMERAEAVCRDLNATNINVERVIGVGHAKNVICSAVKKLEADTLVMGTHGYGFIKRALLGSVSDHCAKHAKCPVVIVKQP 155
BLAST of Ca_03507 vs. TrEMBL
Match: I1NBB8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 8.377e-53 Identity = 108/158 (68.35%), Postives = 132/158 (83.54%), Query Frame = 1 Query: 1 MEKKERKIMVAVDESEESMFALSWSITNLISDTNNNSKLLLLYVKPPSAVYSLDSAGYIFSNETIHALQKYSTELATSVMKRAEAICTNFDATNIKIEKVVGTGDAKNVICSATKKLEADTLVMGSHGYGFFKRALLGSVSDHCVKYAKCPVVIVKQP 474 ME+KERKIMV VDESEESMFALSW ITNLI+DT N KL+LLYVKPP V+S + A Y S+ I A++++ +LA SVM+RAEAIC +F TN+K E+VVG GDAK+VICSA +KLEADTLV+G+HGYGFFKRAL+GSVSD+C K+A+C VV+VKQP Sbjct: 1 MERKERKIMVGVDESEESMFALSWCITNLIADTPN-VKLVLLYVKPPPPVHSFNVAWY--SSHAILAMEQHGKDLANSVMERAEAICKDFKTTNMKKERVVGCGDAKDVICSAVQKLEADTLVLGTHGYGFFKRALIGSVSDYCAKHAECTVVVVKQP 155
BLAST of Ca_03507 vs. TrEMBL
Match: A5BGX7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016798 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 1.337e-50 Identity = 101/158 (63.92%), Postives = 128/158 (81.01%), Query Frame = 1 Query: 7 KKERKIMVAVDESEESMFALSWSITNLISDTNNN-SKLLLLYVKPPSAVY-SLDSAGYIFSNETIHALQKYSTELATSVMKRAEAICTNFDATNIKIEKVVGTGDAKNVICSATKKLEADTLVMGSHGYGFFKRALLGSVSDHCVKYAKCPVVIVKQP 474 +KE++I+VAVDESEESM+ALSW +TNL+SD N S L+LLYVKPP +Y SLD+AGY+F+N+ + A++KY +L SVM RAEA+ +F + + +EK VGTGDAK+VIC A +KL AD LVMGSH YGFFKRALLGSVSDHC K+ KCPVV+VK+P Sbjct: 13 RKEKRIVVAVDESEESMYALSWCLTNLVSDANKTKSTLILLYVKPPPPLYNSLDAAGYLFANDVVGAMEKYGWDLVNSVMARAEAVXKDFSSI-MSVEKKVGTGDAKDVICGAVEKLGADILVMGSHDYGFFKRALLGSVSDHCAKHVKCPVVVVKRP 169
BLAST of Ca_03507 vs. TrEMBL
Match: B9RNF7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1347390 PE=4 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 5.619e-49 Identity = 101/156 (64.74%), Postives = 127/156 (81.41%), Query Frame = 1 Query: 10 KERKIMVAVDESEESMFALSWSITNLISDTNNNSKLLLLYVKPPSAVYS-LDSAGYIFSNETIHALQKYSTELATSVMKRAEAICTNFDATNIKIEKVVGTGDAKNVICSATKKLEADTLVMGSHGYGFFKRALLGSVSDHCVKYAKCPVVIVKQP 474 KERKI+VAVDES+ESM ALSW + NL+S N++S L+LLYVKPP VYS D+AGY+FS + I A++KYS +L SVM+RAEA+ N +N+KIE+VVG+GDAK+VIC++ +KL ADTLVMGSH YGF KR LLGSVSD+C ++ KCPVVIVK P Sbjct: 8 KERKILVAVDESKESMTALSWCLKNLVSP-NSSSTLVLLYVKPPPPVYSAFDAAGYLFSGDVISAMEKYSKDLINSVMERAEAVYKN-SISNVKIERVVGSGDAKDVICNSVEKLRADTLVMGSHDYGFLKRTLLGSVSDYCARHVKCPVVIVKHP 161
BLAST of Ca_03507 vs. TrEMBL
Match: M5VKE7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012449mg PE=4 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 1.530e-46 Identity = 91/159 (57.23%), Postives = 121/159 (76.10%), Query Frame = 1 Query: 1 MEKKERKIMVAVDESEESMFALSWSITNLISDTNNNSKLLLLYVKPPSAVYSLDSAGYIFSNETIHALQKYSTELATSVMKRAEAICTNFDA-TNIKIEKVVGTGDAKNVICSATKKLEADTLVMGSHGYGFFKRALLGSVSDHCVKYAKCPVVIVKQP 474 M+ +E KI+VAVDESEESM ALSW + NL S N ++ L+LLYVKPP + D+AGY+FS++ + ++KY T++ SVM+RAEA+ NF ++ IE++VG GD K+VIC+ +KL ADTLVMGSHGYGF KR L+GSVSD+C K+ +CPVVIVK P Sbjct: 8 MKNRENKIVVAVDESEESMHALSWCLGNLSSSKNTSNTLVLLYVKPPPVHSTFDAAGYMFSSDVVATMEKYGTDMVNSVMQRAEAVYRNFHTNAHVHIERLVGRGDPKDVICNTVEKLRADTLVMGSHGYGFLKRTLVGSVSDYCAKHVECPVVIVKHP 166
BLAST of Ca_03507 vs. TrEMBL
Match: B9GSR9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_816717 PE=4 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 8.397e-45 Identity = 94/155 (60.65%), Postives = 120/155 (77.42%), Query Frame = 1 Query: 13 ERKIMVAVDESEESMFALSWSITNLISDTNNNSKLLLLYVKPPSAVYS-LDSAGYIFSNETIHALQKYSTELATSVMKRAEAICTNFDATNIKIEKVVGTGDAKNVICSATKKLEADTLVMGSHGYGFFKRALLGSVSDHCVKYAKCPVVIVKQP 474 + KI+VAVDESEESM ALSW ++NLIS N+ + L+LLYVKP +YS D A +IFS + I A++KY T+L SVMKRAE + NF++ N+ +EKV+G+G+A++VIC +KL DTLVMGSHGYGF KRA+LGSVS+HC K KCPVVIVK P Sbjct: 9 KHKIVVAVDESEESMHALSWCLSNLISH-NSTTTLVLLYVKPRPTIYSSFDIAEHIFSADVIVAMEKYGTDLVNSVMKRAETVFRNFNS-NVNVEKVIGSGEAQDVICDTVEKLRPDTLVMGSHGYGFLKRAILGSVSEHCAKRVKCPVVIVKHP 161
BLAST of Ca_03507 vs. DB:Swiss
Match: USPAL_ARATH (Universal stress protein A-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g01520 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 5.522e-16 Identity = 48/170 (28.24%), Postives = 85/170 (50.00%), Query Frame = 1 Query: 1 MEKKERKIMVAVDESEESMF---------ALSWSITNLISDTNNNSKLLLLYVKPPSAVYSLDSAGYIFSNETIHALQKYSTELATSVMKRA----EAICTNFDATNIKIEKVVGTGDAKNVICSATKKLEADTLVMGSHGYGFFKRALLGSVSDHCVKYAKCPVVIVKQ 471 M + K+MVAV+ S + A W++ ++ ++ K+LLL+V+ +D G+ ++I+A + ++ S + E + E + TGD K+VIC K++ D LV+GS G G F++ +G+VS CVK+A+CPV+ +K+ Sbjct: 1 MGSEPTKVMVAVNASTIKDYPNPSISCKRAFEWTLEKIVRSNTSDFKILLLHVQ------VVDEDGFD-DVDSIYASPEDFRDMRQSNKAKGLHLLEFFVNKCHEIGVGCEAWIKTGDPKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAECPVMTIKR 163
BLAST of Ca_03507 vs. DB:Swiss
Match: Y531_METJA (Universal stress protein MJ0531 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0531 PE=3 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 2.025e-8 Identity = 46/153 (30.07%), Postives = 78/153 (50.98%), Query Frame = 1 Query: 16 RKIMVAVDESEESMFALSWSITNLISDTNNNSKLLLLYVKPPSAVYSLDSAGYIFSNETIHALQKYSTELATSVMKRAEAICTNFDATNIKIEKVVGTGDAKNVICSATKKLEADTLVMGSHGYGFFKRALLGSVSDHCVKYAKCPVVIVKQP 474 +KI++ D S+ S+ A +I N+ + + +++ +YV S L + G S E I L K E +K+ + + + +KI + G N I +K +AD +VMG+ G +R LLGSV++ +K A CPV++VK+P Sbjct: 27 KKIVIPTDGSDVSLEAAKHAI-NIAKEFD--AEVYAIYVVDVSPFVGLPAEG---SWELISELLK---EEGQEALKKVKKMAEEW---GVKIHTEMLEGVPANEIVEFAEKKKADLIVMGTTGKTGLERILLGSVAERVIKNAHCPVLVVKKP 167
BLAST of Ca_03507 vs. DB:Swiss
Match: PHO34_ARATH (Universal stress protein PHOS34 OS=Arabidopsis thaliana OX=3702 GN=PHOS34 PE=1 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 6.238e-8 Identity = 45/157 (28.66%), Postives = 70/157 (44.59%), Query Frame = 1 Query: 16 RKIMVAVDESEESMFALSWSITNLISDTNNNSKLLLLYVKPPSAVYSLDSAGYIFSNETIHALQKYSTELATSVMKRAEAICTNFDA-TNIKIE---------------KVVGTGDAKNVICSATKKLEADTLVMGSHGYGFFKRA---LLGSVSDH 429 RKI VAVD SEES FA+ W++ + I +++L+V P S ++ D + AT + + +FDA T+ K+ +V D + +C T++L ++MGS G+G KR LGSVSD+ Sbjct: 45 RKIGVAVDLSEESAFAVRWAVDHYI---RPGDAVVILHVSPTSVLFGADWG-------PLPLQTPPPPSAATDPGAQPKPSQEDFDAFTSSKVADLAKPLKEAGFPHKIHIVKDHDMRERLCLETERLNLSAVIMGSRGFGAEKRGSDGKLGSVSDY 191
BLAST of Ca_03507 vs. DB:Swiss
Match: PHO32_ARATH (Universal stress protein PHOS32 OS=Arabidopsis thaliana OX=3702 GN=PHOS32 PE=1 SV=1) HSP 1 Score: 50.8322 bits (120), Expect = 6.089e-7 Identity = 46/149 (30.87%), Postives = 69/149 (46.31%), Query Frame = 1 Query: 16 RKIMVAVDESEESMFALSWSITNLISDTNNNSKLLLLYVKPPSAVYSLDSAGYIFSN--ETIHALQKYSTE-----LATSVMKRAEAICTNFDATNIKIEKVVGTGDAKNVICSATKKLEADTLVMGSHGYGFFKR----ALLGSVSDH 429 RKI VAVD SEES FA+ W++ + I ++LL+V P S ++ D E +A + S E +T V A+ + I I V D + +C ++L ++MGS G+G K+ LGSVSD+ Sbjct: 48 RKIGVAVDLSEESSFAVRWAVDHYI---RPGDAVVLLHVSPTSVLFGADWGPLPLKTQIEDPNAQPQPSQEDFDAFTSTKVADLAKPLKELGFPYKIHI---VKDHDMRERLCLEIERLGLSAVIMGSRGFGAEKKRGSDGKLGSVSDY 190 The following BLAST results are available for this feature:
BLAST of Ca_03507 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot) Total hits: 2
BLAST of Ca_03507 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_03507 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 4
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_03507_v1.0_kabuli ID=Ca_03507_v1.0_kabuli; Name=Ca_03507; organism=Cicer arietinum; type=mRNA; length=477bpback to top protein sequence of Ca_03507_v1.0_kabuli >Ca_03507_v1.0_kabuli ID=Ca_03507_v1.0_kabuli; Name=Ca_03507_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=158bpback to top mRNA from alignment at Ca4:7280428..7281058+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_03507_v1.0_kabuli ID=Ca_03507_v1.0_kabuli; Name=Ca_03507; organism=Cicer arietinum; type=mRNA; length=631bp; location=Sequence derived from: Ca4:7280428..7281058+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca4:7280428..7281058+ >Ca_03507_v1.0_kabuli ID=Ca_03507_v1.0_kabuli; Name=Ca_03507; organism=Cicer arietinum; type=CDS; length=477bp; location=Sequence derived from: Ca4:7280428..7281058+ (Cicer arietinumback to top |