Ca_03627, Ca_03627_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_03627 vs. TrEMBL
Match: G7I9H9_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_1g084040 PE=4 SV=1) HSP 1 Score: 369.007 bits (946), Expect = 8.974e-100 Identity = 187/236 (79.24%), Postives = 200/236 (84.75%), Query Frame = 1 Query: 1 MDFQNXXXXXXXXXXXXXXXSITAEKCRELVGEEGSSQSGKFTILNCFDMGSGTLACAVKEGVKLYFYNIRSSHVEKARQRAIETALVDAVSQGMSPTDSAKYAQKESKKAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLRXXXXXXXXXXXXXXXEQSLGRIGYLVGSHMGSWVGGRIGLMVYDVVNGVHLLLQFVQTGEIEVQKTSVDEASDALETSFDGEVPTYD 708 MDFQN SITAEKCREL+GEEGSSQSGKFT+LNCFDMGSGTLACAVKEGVKLYFY+IRS+HVEKARQRAIE+ALVDAVSQGM PTD+AK+AQKESKKAAKLASRQAKRIIGPIISSGWDFFEAIYYGGT+TEGFLR EQSLGRIGYLVGSHMGSWVGGRIGLM+YDV+NGVHLLL+FVQTGEIEV+KT V E SDA TSFDGEVPT+D Sbjct: 3 MDFQNRKARLFVIVAAIVALSITAEKCRELIGEEGSSQSGKFTLLNCFDMGSGTLACAVKEGVKLYFYSIRSTHVEKARQRAIESALVDAVSQGMPPTDAAKHAQKESKKAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTITEGFLRGTGTLFGAYGGGFFGEQSLGRIGYLVGSHMGSWVGGRIGLMIYDVINGVHLLLEFVQTGEIEVRKTLVHENSDAPYTSFDGEVPTFD 238
BLAST of Ca_03627 vs. TrEMBL
Match: I3S795_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 348.591 bits (893), Expect = 1.255e-93 Identity = 179/236 (75.85%), Postives = 189/236 (80.08%), Query Frame = 1 Query: 1 MDFQNXXXXXXXXXXXXXXXSITAEKCRELVGEEGSSQSGKFTILNCFDMGSGTLACAVKEGVKLYFYNIRSSHVEKARQRAIETALVDAVSQGMSPTDSAKYAQKESKKAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLRXXXXXXXXXXXXXXXEQSLGRIGYLVGSHMGSWVGGRIGLMVYDVVNGVHLLLQFVQTGEIEVQKTSVDEASDALETSFDGEVPTYD 708 MDFQN SITAEKCR+LVGEEGSSQSGKFTILNCFDMGSGT+AC VKEGVKLYFYNIRS+HVE+AR RAIE+ALVDAVSQGMSP DSA Y QKESKKAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLR EQ LGR GYLVGSH+GSWVGGRIGLMVYDV NGV+LLLQFVQTGEIEV K S +E S+A E F GE+P YD Sbjct: 1 MDFQNRRFQVLLAVAAIVVLSITAEKCRQLVGEEGSSQSGKFTILNCFDMGSGTVACGVKEGVKLYFYNIRSAHVERARHRAIESALVDAVSQGMSPKDSATYVQKESKKAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLRGTGTLFGAYGGGFLGEQKLGRFGYLVGSHLGSWVGGRIGLMVYDVFNGVNLLLQFVQTGEIEVHKASANENSEAPEGYFFGEIPVYD 236
BLAST of Ca_03627 vs. TrEMBL
Match: I1NEZ6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 339.347 bits (869), Expect = 7.615e-91 Identity = 176/236 (74.58%), Postives = 188/236 (79.66%), Query Frame = 1 Query: 1 MDFQNXXXXXXXXXXXXXXXSITAEKCRELVGEEGSSQSGKFTILNCFDMGSGTLACAVKEGVKLYFYNIRSSHVEKARQRAIETALVDAVSQGMSPTDSAKYAQKESKKAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLRXXXXXXXXXXXXXXXEQSLGRIGYLVGSHMGSWVGGRIGLMVYDVVNGVHLLLQFVQTGEIEVQKTSVDEASDALETSFDGEVPTYD 708 MDF++ S TAEKCRELVGEEGSSQSGKFTILNCFDMGSGT+ACAVKEGVKLYFYNIRSSH E+AR +AIE+ALVDAV+QGMSPTDSAK+AQKE KKAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLR EQ LGRIGYLVGSH+GSWVGGRIGLMVYDVVNGVHLLLQFVQT E EV+ E S+ E+SF GE P YD Sbjct: 1 MDFESRRLHLLISVVAIVALSFTAEKCRELVGEEGSSQSGKFTILNCFDMGSGTVACAVKEGVKLYFYNIRSSHAERARSQAIESALVDAVAQGMSPTDSAKHAQKEGKKAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLRGTGTLFGTYAGGFLGEQRLGRIGYLVGSHLGSWVGGRIGLMVYDVVNGVHLLLQFVQTAETEVR-----EKSERSESSFFGETPVYD 231
BLAST of Ca_03627 vs. TrEMBL
Match: C6TE96_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 338.961 bits (868), Expect = 9.945e-91 Identity = 176/236 (74.58%), Postives = 188/236 (79.66%), Query Frame = 1 Query: 1 MDFQNXXXXXXXXXXXXXXXSITAEKCRELVGEEGSSQSGKFTILNCFDMGSGTLACAVKEGVKLYFYNIRSSHVEKARQRAIETALVDAVSQGMSPTDSAKYAQKESKKAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLRXXXXXXXXXXXXXXXEQSLGRIGYLVGSHMGSWVGGRIGLMVYDVVNGVHLLLQFVQTGEIEVQKTSVDEASDALETSFDGEVPTYD 708 MDF++ S TAEKCRELVGEEGSSQSGKFTILNCFDMGSGT+ACAVKEGVKLYFYNIRSSH E+AR +AIE+ALVDAV+QGMSPTDSAK+AQKE KKAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLR EQ LGRIGYL+GSH+GSWVGGRIGLMVYDVVNGVHLLLQFVQTGEIEV + S S +SF GE P YD Sbjct: 1 MDFESRRLHLLISVVAIIALSFTAEKCRELVGEEGSSQSGKFTILNCFDMGSGTVACAVKEGVKLYFYNIRSSHAERARSQAIESALVDAVTQGMSPTDSAKHAQKEGKKAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLRGTGTLFGTYAGGFLGEQRLGRIGYLLGSHLGSWVGGRIGLMVYDVVNGVHLLLQFVQTGEIEVHEKSKRSES----SSFFGETPVYD 232
BLAST of Ca_03627 vs. TrEMBL
Match: C6TL32_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 337.806 bits (865), Expect = 2.216e-90 Identity = 175/236 (74.15%), Postives = 188/236 (79.66%), Query Frame = 1 Query: 1 MDFQNXXXXXXXXXXXXXXXSITAEKCRELVGEEGSSQSGKFTILNCFDMGSGTLACAVKEGVKLYFYNIRSSHVEKARQRAIETALVDAVSQGMSPTDSAKYAQKESKKAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLRXXXXXXXXXXXXXXXEQSLGRIGYLVGSHMGSWVGGRIGLMVYDVVNGVHLLLQFVQTGEIEVQKTSVDEASDALETSFDGEVPTYD 708 MDF++ S TAEKCRELVGEEGSSQSGKFTILNCFDMGSGT+ACAVKEGVKLYFYNIRSSH E+AR +AI++ALVDAV+QGMSPTDSAK+AQKE KKAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLR EQ LGRIGYLVGSH+GSWVGGRIGLMVYDVVNGVHLLLQFVQT E EV+ E S+ E+SF GE P YD Sbjct: 1 MDFESRRLHLLISVVAIGALSFTAEKCRELVGEEGSSQSGKFTILNCFDMGSGTVACAVKEGVKLYFYNIRSSHAERARSQAIKSALVDAVAQGMSPTDSAKHAQKEGKKAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLRGTGTLFGTYAGGFLGEQRLGRIGYLVGSHLGSWVGGRIGLMVYDVVNGVHLLLQFVQTAETEVR-----EKSERSESSFFGETPVYD 231
BLAST of Ca_03627 vs. TrEMBL
Match: B9I6Z4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_570714 PE=4 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 9.655e-78 Identity = 148/227 (65.20%), Postives = 173/227 (76.21%), Query Frame = 1 Query: 1 MDFQNXXXXXXXXXXXXXXXSITAEKCRELVGEEGSSQSGKFTILNCFDMGSGTLACAVKEGVKLYFYNIRSSHVEKARQRAIETALVDAVSQGMSPTDSAKYAQKESKKAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLRXXXXXXXXXXXXXXXEQSLGRIGYLVGSHMGSWVGGRIGLMVYDVVNGVHLLLQFVQTGEIEVQKTSVDEASDALETS 681 MDFQ SITAEKCR+LVG++ SSQSGKFTI +CFDMGSGTLACAVKEGVKLY YNIRS+HVE+AR AIE +L+DAV QGMSP D+AK AQKE KAAKLA +QAKRI+GP+ISSGWDFFEA+YYGGT+TEGFLR ++ LGR+GYLVGSH+GSWVGGRIGLMVYDVV+GVH LLQFVQ + EV ++ DE+ ++ E S Sbjct: 1 MDFQKKRVQLLAFIVGIIALSITAEKCRQLVGDDNSSQSGKFTIFDCFDMGSGTLACAVKEGVKLYVYNIRSAHVERARNLAIERSLLDAVGQGMSPQDAAKTAQKEGTKAAKLAKQQAKRIVGPVISSGWDFFEALYYGGTITEGFLRGSGTLVGAYAGGFLGDERLGRVGYLVGSHLGSWVGGRIGLMVYDVVDGVHYLLQFVQGEDSEVYESPPDESPESYEHS 227
BLAST of Ca_03627 vs. TrEMBL
Match: B9N4R1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_671760 PE=4 SV=1) HSP 1 Score: 292.738 bits (748), Expect = 8.174e-77 Identity = 151/227 (66.52%), Postives = 166/227 (73.13%), Query Frame = 1 Query: 1 MDFQNXXXXXXXXXXXXXXXSITAEKCRELVGEEGSSQSGKFTILNCFDMGSGTLACAVKEGVKLYFYNIRSSHVEKARQRAIETALVDAVSQGMSPTDSAKYAQKESKKAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLRXXXXXXXXXXXXXXXEQSLGRIGYLVGSHMGSWVGGRIGLMVYDVVNGVHLLLQFVQTGEIEVQKTSVDEASDALETS 681 MDFQ SITAEKCR+LVG++ SSQSGKFTI NCFDMGSGTLACAVKEGVKLYFYNIRSSHVE+AR AIE +L+D + QGM D AK AQKE KAAKLA RQ KRIIGP+ISSGWDFFEA+YYGGTVTEGFLR E+ LGR+GYLVGSH+GSWVGGRIGLMVYDVVNGVH LLQFVQ + EV +T E + E S Sbjct: 1 MDFQKRRVLFLVFIVGTIALSITAEKCRQLVGDDYSSQSGKFTIFNCFDMGSGTLACAVKEGVKLYFYNIRSSHVERARNLAIERSLLDTIGQGMPAQDVAKTAQKEGAKAAKLAKRQTKRIIGPVISSGWDFFEALYYGGTVTEGFLRGSGTLAGAYAGGFFGEERLGRVGYLVGSHLGSWVGGRIGLMVYDVVNGVHYLLQFVQGEDGEVHETPTYENFEVSEDS 227
BLAST of Ca_03627 vs. TrEMBL
Match: B9RFJ0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1435150 PE=4 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 2.013e-75 Identity = 150/230 (65.22%), Postives = 166/230 (72.17%), Query Frame = 1 Query: 4 DFQNXXXXXXXXXXXXXXXSITAEKCRELVGEEGSSQSGKFTILNCFDMGSGTLACAVKEGVKLYFYNIRSSHVEKARQRAIETALVDAVSQGMSPTDSAKYAQKESKKAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLRXXXXXXXXXXXXXXXEQSLGRIGYLVGSHMGSWVGGRIGLMVYDVVNGVHLLLQFVQTGEIEV----QKTSVDEASDALETS 681 DFQ SITA+KCR+LVGE+ SSQSGKFTI NCFDM +GTLAC VKEGVKLYFYNIRS+HVE AR AIE AL+DA+ QGM+ D+AK AQKE KAAKLA+RQAKRIIGPIISSGWDFFEA+YYGGT+TEGFLR E LGR GYLVGSH+GSWVGGRIGLMVYDVVNGVH LLQ Q G+ EV +K V E S E+S Sbjct: 4 DFQKKRVQLLIFMIGIVALSITADKCRQLVGEDSSSQSGKFTIFNCFDMSTGTLACTVKEGVKLYFYNIRSAHVESARNLAIERALLDALGQGMAAKDAAKQAQKEGAKAAKLATRQAKRIIGPIISSGWDFFEALYYGGTITEGFLRGTGTLGGAYAGGFLGEARLGRFGYLVGSHLGSWVGGRIGLMVYDVVNGVHYLLQVFQAGDSEVHENYEKVVVSEDSPVYESS 233
BLAST of Ca_03627 vs. TrEMBL
Match: F6I4S6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g01200 PE=4 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 5.858e-75 Identity = 146/216 (67.59%), Postives = 167/216 (77.31%), Query Frame = 1 Query: 61 SITAEKCRELVGEEGSSQSGKFTILNCFDMGSGTLACAVKEGVKLYFYNIRSSHVEKARQRAIETALVDAVSQGMSPTDSAKYAQKESKKAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLRXXXXXXXXXXXXXXXEQSLGRIGYLVGSHMGSWVGGRIGLMVYDVVNGVHLLLQFVQTGEIEVQKTSVDEASDALETSFDGEVPTYD 708 SITAEKCR+L+GE+GSSQSGKFT+LNCFDM SGTLAC VKEGVKLYFYNIR+ HVEKAR AIE AL DA++QG++ D+AK+AQKE KAAKLA+RQAKRIIGPIISSGWDFFEAIYYGGT+TEGFLR EQ LGR GYLVGSH+GSWVGGRIGLM+YDV NGV LLQ VQ ++T +D +S+ E E P Y+ Sbjct: 21 SITAEKCRQLLGEDGSSQSGKFTLLNCFDMSSGTLACTVKEGVKLYFYNIRAVHVEKARHHAIEGALSDALTQGLNAKDAAKHAQKEGAKAAKLATRQAKRIIGPIISSGWDFFEAIYYGGTLTEGFLRGTGTLFGAYTGGFLGEQRLGRFGYLVGSHLGSWVGGRIGLMIYDVANGVQFLLQSVQP-----EETPMDMSSEVPEDPGSYESPAYE 231
BLAST of Ca_03627 vs. TrEMBL
Match: I1NBR6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 6.476e-74 Identity = 143/218 (65.60%), Postives = 165/218 (75.69%), Query Frame = 1 Query: 1 MDFQNXXXXXXXXXXXXXXXSITAEKCRELVGEEGSSQSGKFTILNCFDMGSGTLACAVKEGVKLYFYNIRSSHVEKARQRAIETALVDAVSQGMSPTDSAKYAQKESKKAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLRXXXXXXXXXXXXXXXEQSLGRIGYLVGSHMGSWVGGRIGLMVYDVVNGVHLLLQFVQTGEIEVQKTSVD 654 MDFQ SITAEKCR+LVGE+ SSQSGKFT LNCFDM SGTLAC+VKE VKLY YNIR++HVE+AR A+++ALVDA+ QGMS + SAKYA+KE KAAKLASR+A+RIIGPI+SSGWDFFEA+YYGGT+TEGFLR +Q LGR GYLVGSHMGSW+GGR+GLM+YDV NGVH LL VQ+ EVQKTS D Sbjct: 1 MDFQKKRVQFLAFVAAIIALSITAEKCRQLVGEKASSQSGKFTFLNCFDMTSGTLACSVKESVKLYCYNIRAAHVERARHDAMKSALVDALKQGMSQSASAKYAKKEGDKAAKLASRKARRIIGPILSSGWDFFEAVYYGGTLTEGFLRGSGTLFGTYAGGFLGDQRLGRFGYLVGSHMGSWIGGRMGLMLYDVANGVHFLLHSVQSLGSEVQKTSAD 218 The following BLAST results are available for this feature:
BLAST of Ca_03627 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25 Position : 0 Zoom : x 1
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BLAST of Ca_03627 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0 Position : 0 Zoom : x 1
Expression
Available Analyses Select an Expression Analysis Select a property to group and sort biological samples Select a property to color biological samples Hover the mouse over a column in the graph to view more information about that biological sample. You can click and drag to rearrange groups along the x-axis. You can also click and drag to move the legend. InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_03627_v1.0_kabuli ID=Ca_03627_v1.0_kabuli; Name=Ca_03627; organism=Cicer arietinum; type=mRNA; length=819bpback to top protein sequence of Ca_03627_v1.0_kabuli >Ca_03627_v1.0_kabuli ID=Ca_03627_v1.0_kabuli; Name=Ca_03627_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=272bpback to top mRNA from alignment at Ca4:6163764..6165553+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_03627_v1.0_kabuli ID=Ca_03627_v1.0_kabuli; Name=Ca_03627; organism=Cicer arietinum; type=mRNA; length=1790bp; location=Sequence derived from: Ca4:6163764..6165553+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca4:6163764..6165553+ >Ca_03627_v1.0_kabuli ID=Ca_03627_v1.0_kabuli; Name=Ca_03627; organism=Cicer arietinum; type=CDS; length=819bp; location=Sequence derived from: Ca4:6163764..6165553+ (Cicer arietinumback to top |