Ca_03651, Ca_03651_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_03651 vs. TrEMBL
Match: G7I8S7_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_1g083600 PE=2 SV=1) HSP 1 Score: 322.398 bits (825), Expect = 7.825e-86 Identity = 176/259 (67.95%), Postives = 191/259 (73.75%), Query Frame = 1 Query: 13 SMSIIHNLKSATYVFXXXXXXLRNASTFP-----TQLSFKVPIFCSNSSPLSRRIFLPSVSGIWDALTGG-GNNNTHVAVLAIRRGMSLFRQGDVLGSVAEFDRAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGV----------GIDPRPVMREAYNMFKHGGDPEKLVAAFSNSRDGEYFYASLYAGLFYESQNESDAAKVHIVAACQSSYGQRFTVFVEIGSSAEIFC 705 SMSIIHNLK T +S FP + SFK PIFCSN S LSRR+FLPSVSGIWDA+TGG GNNNT+ A+LAIRRGMSLFRQG+VLGSV EFD+AI+LDPRQKA RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGV G DPRPVMRE YNMFK GGDPEKLV AFSNSR+ +YFYASLYAGL+YESQNESDAAKVHIVAAC+S YGQR ++ S C Sbjct: 4 SMSIIHNLKPTTTTTLLSPSI---SSPFPLPSSSSSSSFKPPIFCSNPSNLSRRLFLPSVSGIWDAITGGSGNNNTNEALLAIRRGMSLFRQGEVLGSVVEFDKAIQLDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARKRYLEVGRDPRPVMRETYNMFKDGGDPEKLVGAFSNSRESDYFYASLYAGLYYESQNESDAAKVHIVAACKSLYGQRSDDYMASLSKVHCLC 259
BLAST of Ca_03651 vs. TrEMBL
Match: Q2HW44_MEDTR (TPR repeat OS=Medicago truncatula GN=MtrDRAFT_AC147963g33v2 PE=4 SV=2) HSP 1 Score: 319.316 bits (817), Expect = 6.624e-85 Identity = 174/257 (67.70%), Postives = 190/257 (73.93%), Query Frame = 1 Query: 13 SMSIIHNLKSATYVFXXXXXXLRNASTFP-----TQLSFKVPIFCSNSSPLSRRIFLPSVSGIWDALTGG-GNNNTHVAVLAIRRGMSLFRQGDVLGSVAEFDRAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVG--------IDPRPVMREAYNMFKHGGDPEKLVAAFSNSRDGEYFYASLYAGLFYESQNESDAAKVHIVAACQSSYGQRFTVFVEIGSSAEIFC 705 SMSIIHNLK T +S FP + SFK PIFCSN S LSRR+FLPSVSGIWDA+TGG GNNNT+ A+LAIRRGMSLFRQG+VLGSV EFD+AI+LDPRQKA RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGV +PRPVMRE YNMFK GGDPEKLV AFSNSR+ +YFYASLYAGL+YESQNESDAAKVHIVAAC+S YGQR ++ S C Sbjct: 4 SMSIIHNLKPTTTTTLLSPSI---SSPFPLPSSSSSSSFKPPIFCSNPSNLSRRLFLPSVSGIWDAITGGSGNNNTNEALLAIRRGMSLFRQGEVLGSVVEFDKAIQLDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARKRYLEANPRPVMRETYNMFKDGGDPEKLVGAFSNSRESDYFYASLYAGLYYESQNESDAAKVHIVAACKSLYGQRSDDYMASLSKVHCLC 257
BLAST of Ca_03651 vs. TrEMBL
Match: B7FKP3_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 318.546 bits (815), Expect = 1.130e-84 Identity = 174/259 (67.18%), Postives = 189/259 (72.97%), Query Frame = 1 Query: 13 SMSIIHNLKSATYVFXXXXXXLRNASTFP-----TQLSFKVPIFCSNSSPLSRRIFLPSVSGIWDALTGG-GNNNTHVAVLAIRRGMSLFRQGDVLGSVAEFDRAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGV----------GIDPRPVMREAYNMFKHGGDPEKLVAAFSNSRDGEYFYASLYAGLFYESQNESDAAKVHIVAACQSSYGQRFTVFVEIGSSAEIFC 705 SMSIIHNLK T +S FP + SFK P FCSN S LSRR+FLPSVSGIWDA+TGG GNNNT+ A+LA RRGMSLFRQG+VLGSV EFD+AI+LDPRQKA RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGV G DPRPVMRE YNMFK GGDPEKLV AFSNSR+ +YFYASLYAGL+YESQNESDAAKVHIVAAC+S YGQR ++ S C Sbjct: 4 SMSIIHNLKPTTTTTLLSPSI---SSPFPLPSSSSSSSFKPPTFCSNPSNLSRRLFLPSVSGIWDAITGGSGNNNTNEALLATRRGMSLFRQGEVLGSVVEFDKAIQLDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDGARKRYLEVGRDPRPVMRETYNMFKDGGDPEKLVGAFSNSRESDYFYASLYAGLYYESQNESDAAKVHIVAACKSLYGQRSDDYMASLSKVHCLC 259
BLAST of Ca_03651 vs. TrEMBL
Match: I3SUQ3_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 317.005 bits (811), Expect = 3.288e-84 Identity = 171/253 (67.59%), Postives = 185/253 (73.12%), Query Frame = 1 Query: 16 MSIIHNLKSATYVFXXXXXXLRNASTFPTQLSFKVPIFCSNSSPLSRRIFLPSVSGIWDALTGGGNNNT-HVAVLAIRRGMSLFRQGDVLGSVAEFDRAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGV----------GIDPRPVMREAYNMFKHGGDPEKLVAAFSNSRDGEYFYASLYAGLFYESQNESDAAKVHIVAACQSSYGQRFTVFVEIGSSAEIFC 705 M IHNLK V L + S+FP QL K PIFCSN S L+RR+FLPSVS IWDA+TGG NNN A+LAIRRGMSLFRQGDV GSV EFD+AI+LDPRQKA RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGV G D RPVMREAYNMF+ GGDPEKLVAAFSN R+GEYFYASLYAGL+YESQNE+DAAKVH+VAACQSSYGQR + S C Sbjct: 1 MFTIHNLKPPILV--SPSPCLHHPSSFPLQLPSKAPIFCSNPSILTRRLFLPSVSAIWDAVTGGNNNNNGREALLAIRRGMSLFRQGDVSGSVVEFDKAIQLDPRQKAYLWQRGLSLYYLNRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARKRYLEVGRDSRPVMREAYNMFRDGGDPEKLVAAFSNGREGEYFYASLYAGLYYESQNETDAAKVHMVAACQSSYGQRSDDYTASLSKVHCLC 251
BLAST of Ca_03651 vs. TrEMBL
Match: B9RFF0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1434130 PE=4 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 2.600e-69 Identity = 136/182 (74.73%), Postives = 146/182 (80.22%), Query Frame = 1 Query: 148 LSRRIFLPSVSGIWDALTGGGNNNTHVAVLAIRRGMSLFRQGDVLGSVAEFDRAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVGIDPRPVMREAYNMFKHGGDPEKLVAAFSNSRDGEYFYASLYAGLFYESQNESDAAKVHIVAACQSSYGQ 657 LSRR+FLP+VSGIWDALTG NNN AVLAIRRGM LFRQGDVLGS+ EFD+A+ELDPRQKA RFEEGAEQFRLDVAQNPNDTEESIWCF Q VG DPRPVMREAY+MFK GGDPEKLV AFSN R+ EYFYASLYAGL++ESQNE DAAK HIVAA +S YGQ Sbjct: 19 LSRRLFLPAVSGIWDALTGA-NNNAREAVLAIRRGMLLFRQGDVLGSLVEFDKAMELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFQARKQFLEVGRDPRPVMREAYSMFKDGGDPEKLVTAFSNGRENEYFYASLYAGLYHESQNEPDAAKFHIVAASKSPYGQ 199 HSP 2 Score: 26.1794 bits (56), Expect = 2.600e-69 Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 3 Query: 660 VHCLCRNW 683 VHCLCRNW Sbjct: 211 VHCLCRNW 218
BLAST of Ca_03651 vs. TrEMBL
Match: B9I7A8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_570752 PE=4 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 3.901e-69 Identity = 142/230 (61.74%), Postives = 165/230 (71.74%), Query Frame = 1 Query: 82 NASTFPTQLSFKVPIFCSNSSPLSRRIFLPSVSGIWDALTGGGNNNTHVAVLAIRRGMSLFRQGDVLGSVAEFDRAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGV----------GIDPRPVMREAYNMFKHGGDPEKLVAAFSNSRDGEYFYASLYAGLFYESQNESDAAKVHIVAACQSSYGQRFTVFVEIGSSAEIFC 705 N+ F T + ++ + +RR+FLPSVSGIWDALTGG NNN AV+AIRRGM LFRQGDVLGS+ EFD+AIELD RQKA RFEEGA+QFR+DVAQNPNDTEESIWCFLCEAQLYGV G DPRPVMREAYNMFK GGDPEK AFSN + EYFYASLYAGL++E+Q E +AAKV I+AAC+S YGQR + + S A++ C Sbjct: 37 NSHFFSTNIPSRIHNLQNPLPTFTRRLFLPSVSGIWDALTGG-NNNPREAVMAIRRGMLLFRQGDVLGSLVEFDKAIELDTRQKAYLWQRGLSLYYVDRFEEGAQQFRIDVAQNPNDTEESIWCFLCEAQLYGVDEARKRFLEVGRDPRPVMREAYNMFKDGGDPEKFATAFSNGQGNEYFYASLYAGLYHEAQKEPEAAKVQIIAACRSPYGQRSDDY--MASLAKVHC 263
BLAST of Ca_03651 vs. TrEMBL
Match: M5W3H5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa023746mg PE=4 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 8.692e-69 Identity = 149/228 (65.35%), Postives = 166/228 (72.81%), Query Frame = 1 Query: 91 TFPTQLSFKVPIFCSNSSPLS-RRIFLPSVSGIWDALTGGGNNNTHVAVLAIRRGMSLFRQGDVLGSVAEFDRAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYG----------VGIDPRPVMREAYNMFKHGGDPEKLVAAFSNSRDGEYFYASLYAGLFYESQNESDAAKVHIVAACQSSYGQRFTVFVEIGSSAEIFC 705 T P SFK +NS S RR+FLPSVSGIWDALT G NN AV AIR GM LFRQGDV GSVAEFD+AIELDPRQ+A RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYG VG DPRPVMR+AYNMFK GGDPEKLVAAFS R+ +YFYASLYAGL++ESQ ++DAA++HIVAA QS YGQR + + S A++ C Sbjct: 1 TQPPPFSFKTR---TNSQFFSTRRLFLPSVSGIWDALTSG--NNAREAVAAIRHGMVLFRQGDVSGSVAEFDKAIELDPRQQAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGTSEARERFLEVGQDPRPVMRDAYNMFKDGGDPEKLVAAFSKGRESDYFYASLYAGLYFESQKKTDAAELHIVAAYQSPYGQRSDDY--MASLAKVHC 221
BLAST of Ca_03651 vs. TrEMBL
Match: F6I4N1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g02060 PE=4 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 1.936e-68 Identity = 140/215 (65.12%), Postives = 162/215 (75.35%), Query Frame = 1 Query: 82 NASTFPTQLSFKVPIFCSNSSPLSRRIFLPSVSGIWDALTGGGNNNTHVAVLAIRRGMSLFRQGDVLGSVAEFDRAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYG----------VGIDPRPVMREAYNMFKHGGDPEKLVAAFSNSRDGEYFYASLYAGLFYESQNESDAAKVHIVAACQSSYGQR 660 ++S F T + ++ + LSRR+FLPSVSGIW+ALTGG ++ + +AIRRGM LFRQGDV GS+ EFD+AIELDPRQKA RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYG VG DPRPVMREAYNMFK GGDPEKLVA FS ++ GEYFYASLYAGL+YESQN+ +AK+H++AACQS YGQR Sbjct: 37 SSSPFFTTTASRIHSHQTPFHSLSRRLFLPSVSGIWNALTGG--DSYRESAMAIRRGMLLFRQGDVSGSLVEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGADEARRRFLEVGRDPRPVMREAYNMFKDGGDPEKLVAQFSGNQAGEYFYASLYAGLYYESQNDPGSAKLHLLAACQSPYGQR 249
BLAST of Ca_03651 vs. TrEMBL
Match: M0TN58_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 6.229e-67 Identity = 136/202 (67.33%), Postives = 151/202 (74.75%), Query Frame = 1 Query: 139 SSPLSRRIFLPSVSG-IWDALTGGGNNNTHVAVLAIRRGMSLFRQGDVLGSVAEFDRAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVGIDPRPVMREAYNMFKHGGDPEKLVAAFSNSRDGEYFYASLYAGLFYESQNESDAAKVHIVAACQSSYGQRFTVFVEIGSSAEIFC 705 S PL RRIFLP+ S IWDALTGGG A LA+RRGM LFRQGDV GS+AEFDRA+ELDPRQKA RFEEGAEQFRLDVA+NPNDTEESIWCFLCEAQLYGVG D RPVMREAY+MFK GGDP+KLV F+N R EYFYASLYAGL+YESQN++D AK+ IVAACQ YG R ++ + C Sbjct: 39 SLPLPRRIFLPTASASIWDALTGGGGA-ARDASLAVRRGMLLFRQGDVSGSLAEFDRAVELDPRQKAYLWQRGLSLYYLNRFEEGAEQFRLDVAKNPNDTEESIWCFLCEAQLYGVGRDSRPVMREAYSMFKDGGDPKKLVEIFANGRADEYFYASLYAGLYYESQNDTDVAKLQIVAACQCPYGSRSDDYMAALAKVHCLC 239
BLAST of Ca_03651 vs. TrEMBL
Match: I1LB79_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 257.299 bits (656), Expect = 3.091e-66 Identity = 147/243 (60.49%), Postives = 165/243 (67.90%), Query Frame = 1 Query: 13 SMSIIHNLKSATYVFXXXXXXLRNASTFPTQLSFKVPIFCSNSSPLSRRIFLPSVSGIWDALTGGGNNNTHVAVLAIRRGMSLFRQGDVLGSVAEFDRAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVGIDPRPVMREAYNMFKHGGDPEKLVAAFSNSRDGEYFYASLYAGLFYESQNESDAAKVHIVAACQSSYGQRFTVFVEIGSSAEIFC 705 S I HNLK + L + S+FP QLS K P S+ L+RR+FLPSVSGIWDALTGG NNN AVLAIRRGM LFRQGDV GS+AEFD+AI+LDPRQKA RFEE AEQFRLDVAQNPNDTEESIWCFLCEAQL+GV + R EA AFS SR+GEYFYASLYAGL+YESQN +DAAKVHIVAACQS YGQR + + S A++ C Sbjct: 2 SAFISHNLKPGGIMVSPS---LHHRSSFPLQLSLKAPFSASHPLVLTRRLFLPSVSGIWDALTGGNNNNAREAVLAIRRGMLLFRQGDVSGSLAEFDKAIQLDPRQKAYLWQRGLSLYYLNRFEEAAEQFRLDVAQNPNDTEESIWCFLCEAQLFGVD-EARKRYLEA--------------TAFSGSREGEYFYASLYAGLYYESQNGTDAAKVHIVAACQSPYGQRSDDY--MASLAKVHC 224 The following BLAST results are available for this feature:
BLAST of Ca_03651 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_03651 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_03651_v1.0_kabuli ID=Ca_03651_v1.0_kabuli; Name=Ca_03651; organism=Cicer arietinum; type=mRNA; length=741bpback to top protein sequence of Ca_03651_v1.0_kabuli >Ca_03651_v1.0_kabuli ID=Ca_03651_v1.0_kabuli; Name=Ca_03651_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=246bpback to top mRNA from alignment at Ca4:5964783..5967613+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_03651_v1.0_kabuli ID=Ca_03651_v1.0_kabuli; Name=Ca_03651; organism=Cicer arietinum; type=mRNA; length=2831bp; location=Sequence derived from: Ca4:5964783..5967613+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca4:5964783..5967613+ >Ca_03651_v1.0_kabuli ID=Ca_03651_v1.0_kabuli; Name=Ca_03651; organism=Cicer arietinum; type=CDS; length=741bp; location=Sequence derived from: Ca4:5964783..5967613+ (Cicer arietinumback to top |