Ca_03658, Ca_03658_v1.0_kabuli (mRNA) Cicer arietinum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_03658 vs. TrEMBL
Match: G7I8R3_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_1g083450 PE=4 SV=1) HSP 1 Score: 506.138 bits (1302), Expect = 7.708e-141 Identity = 238/270 (88.15%), Postives = 255/270 (94.44%), Query Frame = 1
Query: 283 GKPNGVCVSQGGRFPPFKSEGLPPKSGPKDLTLCRVFRKKTCCDVSHTHPALLSVRKLASAGEASQECLHLWELLECAICDPHMGTRPGPPLICESLCERIYDACSNAYFSMDVKTQMLAPCGGNDFVCGRAAEWVSNGTDLCLAAGFRVKQSDVIDIASEEIFCYGDKASLGSVADSWKSSQFESTKKGESSVIFDDFNQWAREMPFSERISWAIGGMVLTAGLVFISKRKSNSQRQKLAAIKRTARKLGSRMVDQQPSDAPENRKKIS 1092
GKPNGVCVSQGGR+PPFKSEG PPK GPKDLTLCRVFRKKTCCDV+HTHPALLSVRKL+S GEAS ECLHLWELLECAICDP +GT+PGPPLIC SLCERIY+ACSNAYFSMDVK+Q+LAPCG NDFVCGRAAEWVSNGTDLCLAAGFRVK SD++ +ASEE FCYGDKASLGSVADSWK+SQFESTKKGE+SVIFDDF QW R+MPF ER+SWAIGGMVLTAGLVFISKRKSNSQRQKLAAIKRTARKLGSRM DQQPS+APE RK+IS
Sbjct: 21 GKPNGVCVSQGGRYPPFKSEGNPPKRGPKDLTLCRVFRKKTCCDVTHTHPALLSVRKLSSGGEASSECLHLWELLECAICDPSVGTQPGPPLICASLCERIYEACSNAYFSMDVKSQVLAPCGVNDFVCGRAAEWVSNGTDLCLAAGFRVKSSDIVHVASEETFCYGDKASLGSVADSWKASQFESTKKGENSVIFDDFQQWTRDMPFKERVSWAIGGMVLTAGLVFISKRKSNSQRQKLAAIKRTARKLGSRMADQQPSNAPEIRKRIS 290
BLAST of Ca_03658 vs. TrEMBL
Match: I3T2K6_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 503.827 bits (1296), Expect = 3.825e-140 Identity = 237/270 (87.78%), Postives = 254/270 (94.07%), Query Frame = 1
Query: 283 GKPNGVCVSQGGRFPPFKSEGLPPKSGPKDLTLCRVFRKKTCCDVSHTHPALLSVRKLASAGEASQECLHLWELLECAICDPHMGTRPGPPLICESLCERIYDACSNAYFSMDVKTQMLAPCGGNDFVCGRAAEWVSNGTDLCLAAGFRVKQSDVIDIASEEIFCYGDKASLGSVADSWKSSQFESTKKGESSVIFDDFNQWAREMPFSERISWAIGGMVLTAGLVFISKRKSNSQRQKLAAIKRTARKLGSRMVDQQPSDAPENRKKIS 1092
GKPNGVCVSQGGR+PP KSEG PPK GPKDLTLCRVFRKKTCCDV+HTHPALLSVRKL+S GEAS ECLHLWELLECAICDP +GT+PGPPLIC SLCERIY+ACSNAYFSMDVK+Q+LAPCG NDFVCGRAAEWVSNGTDLCLAAGFRVK SD++ +ASEE FCYGDKASLGSVADSWK+SQFESTKKGE+SVIFDDF QW R+MPF ER+SWAIGGMVLTAGLVFISKRKSNSQRQKLAAIKRTARKLGSRM DQQPS+APE RK+IS
Sbjct: 21 GKPNGVCVSQGGRYPPIKSEGNPPKRGPKDLTLCRVFRKKTCCDVTHTHPALLSVRKLSSGGEASSECLHLWELLECAICDPSVGTQPGPPLICASLCERIYEACSNAYFSMDVKSQVLAPCGVNDFVCGRAAEWVSNGTDLCLAAGFRVKSSDIVHVASEETFCYGDKASLGSVADSWKASQFESTKKGENSVIFDDFQQWTRDMPFKERVSWAIGGMVLTAGLVFISKRKSNSQRQKLAAIKRTARKLGSRMADQQPSNAPEIRKRIS 290
BLAST of Ca_03658 vs. TrEMBL
Match: I1NJ29_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 481.485 bits (1238), Expect = 2.033e-133 Identity = 226/268 (84.33%), Postives = 250/268 (93.28%), Query Frame = 1
Query: 280 SGKPNGVCVSQGGRFPPFKSEGLPPKSGPKDLTLCRVFRKKTCCDVSHTHPALLSVRKLASAGEASQECLHLWELLECAICDPHMGTRPGPPLICESLCERIYDACSNAYFSMDVKTQMLAPCGGNDFVCGRAAEWVSNGTDLCLAAGFRVKQSDVIDIASEEIFCYGDKASLGSVADSWKSSQFESTKKGESSVIFDDFNQWAREMPFSERISWAIGGMVLTAGLVFISKRKSNSQRQKLAAIKRTARKLGSRMVDQQPSDAPENRK 1083
SGKP+GVCVSQGGRFPPFKSEG PK+GPKDLTLCR+FRKKTCCDV+HTHPALLSVRKLAS GEA+QECLHLWELLEC+ICDP +GT+PGPPLIC SLCERIY+ACSNAYFSMDVKTQ+LAPCG NDFVCGRAAEWVSNGTDLCLAAGFRVK SD++DIASEE CYGDKASLGSV DSWK+SQFE T+KGES + DDF QWAREMPF ER+SWAIGGMVLTAGL+FISKRKS++QRQKLAAIKRTARKL SRM++Q+PS+A ENR+
Sbjct: 32 SGKPSGVCVSQGGRFPPFKSEGGAPKNGPKDLTLCRIFRKKTCCDVTHTHPALLSVRKLASTGEATQECLHLWELLECSICDPRVGTQPGPPLICASLCERIYEACSNAYFSMDVKTQILAPCGVNDFVCGRAAEWVSNGTDLCLAAGFRVKPSDIVDIASEETSCYGDKASLGSVVDSWKASQFELTEKGESLRMLDDFQQWAREMPFGERVSWAIGGMVLTAGLMFISKRKSHNQRQKLAAIKRTARKLESRMMEQRPSNAQENRR 299
BLAST of Ca_03658 vs. TrEMBL
Match: I1LB90_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 477.633 bits (1228), Expect = 2.936e-132 Identity = 226/273 (82.78%), Postives = 250/273 (91.58%), Query Frame = 1
Query: 280 SGKPNGVCVSQGGRFPPFKSEGLPPKSGPKDLTLCRVFRKKTCCDVSHTHPALLSVRKLASAGEASQECLHLWELLECAICDPHMGTRPGPPLICESLCERIYDACSNAYFSMDVKTQMLAPCGGNDFVCGRAAEWVSNGTDLCLAAGFRVK--QSDVIDIASEEIFCYGDKASLGSVADSWKSSQFESTKKGESSVIFDDFNQWAREMPFSERISWAIGGMVLTAGLVFISKRKSNSQRQKLAAIKRTARKLGSRMVDQQPSDAPENRKKIS 1092
SGKP+GVCVSQGGRFPPFKSEG PK GPKDLTLCR+FRKKTCCDV+HTHPALLSVRKLAS GEASQECLHLWELLEC+ICDP +GT+PGPPLIC SLCERIY+ACSNAYFSMDVKTQ+LAPCG NDFVCGRAAEWVSNGTDLCLAAGFRVK +SD++ IASEE CYGDKASLGSVADSWK+SQFE T+KGES + DDF QW REMPF E++SWAIGGMVLTAGLVFISKRKS++QRQKLAAIKRTARKL RM++Q PS+A ENR+++S
Sbjct: 34 SGKPSGVCVSQGGRFPPFKSEGSTPKKGPKDLTLCRIFRKKTCCDVTHTHPALLSVRKLASTGEASQECLHLWELLECSICDPRVGTQPGPPLICASLCERIYEACSNAYFSMDVKTQILAPCGVNDFVCGRAAEWVSNGTDLCLAAGFRVKPSESDIVHIASEETSCYGDKASLGSVADSWKASQFELTRKGESLRMLDDFQQWVREMPFGEKVSWAIGGMVLTAGLVFISKRKSHNQRQKLAAIKRTARKLEGRMMEQWPSNAQENRRRVS 306
BLAST of Ca_03658 vs. TrEMBL
Match: I3STE4_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 452.21 bits (1162), Expect = 1.321e-124 Identity = 215/275 (78.18%), Postives = 240/275 (87.27%), Query Frame = 1
Query: 280 SGKPNGVCVSQGGRFPPFKSEGLPPKSGPKDLTLCRVFRKKTCCDVSHTHPALLSVRKLASAGEASQECLHLWELLECAICDPHMGTRPGPPLICESLCERIYDACSNAYFSMDVKTQMLAPCGGNDFVCGRAAEWVSNGTDLCLAAGFRVKQSDVIDIASEEIFCYGDKASLGSVADSWKSSQFESTKKGESSVIFDDFNQWAREMPFSERISWAIGGMVLTAGLVFISKRKSNSQRQKLAAIKRTARKLGSR----MVDQQPSDAPENRKKIS 1092
SGKP+GVCVSQGGRF PFKSEG PPK GPKDLTLCRVFRKKTCCD++HTHPALLSVRKLAS GEASQECLHLWELLEC+ICDP +GTRPGPPL+C SLCERI++ACSNAYFSMDVKTQ+LAPCG NDFVCGRAAEW SNGTDLC AAGFRVK SD++ I SEE +CYGDKASLGSV+DSWK+SQ E +KGE+ FDDF W +MP SER+ WAIGGMVLTAGLVFISKRKS++QRQKLAAIKR ARKL R M +Q+ S+A ENRK++S
Sbjct: 20 SGKPSGVCVSQGGRFAPFKSEGSPPKKGPKDLTLCRVFRKKTCCDIAHTHPALLSVRKLASTGEASQECLHLWELLECSICDPRVGTRPGPPLVCASLCERIFEACSNAYFSMDVKTQLLAPCGVNDFVCGRAAEWASNGTDLCAAAGFRVKPSDIVHIPSEETYCYGDKASLGSVSDSWKASQSELARKGENLRKFDDFQLWFMDMPLSERVLWAIGGMVLTAGLVFISKRKSHNQRQKLAAIKRAARKLEGRMPGMMAEQRLSNALENRKRVS 294
BLAST of Ca_03658 vs. TrEMBL
Match: K7N5A4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 424.476 bits (1090), Expect = 2.949e-116 Identity = 196/229 (85.59%), Postives = 213/229 (93.01%), Query Frame = 1
Query: 280 SGKPNGVCVSQGGRFPPFKSEGLPPKSGPKDLTLCRVFRKKTCCDVSHTHPALLSVRKLASAGEASQECLHLWELLECAICDPHMGTRPGPPLICESLCERIYDACSNAYFSMDVKTQMLAPCGGNDFVCGRAAEWVSNGTDLCLAAGFRVKQSDVIDIASEEIFCYGDKASLGSVADSWKSSQFESTKKGESSVIFDDFNQWAREMPFSERISWAIGGMVLTAGLVFI 966
SGKP+GVCVSQGGRFPPFKSEG PK+GPKDLTLCR+FRKKTCCDV+HTHPALLSVRKLAS GEA+QECLHLWELLEC+ICDP +GT+PGPPLIC SLCERIY+ACSNAYFSMDVKTQ+LAPCG NDFVCGRAAEWVSNGTDLCLAAGFRVK SD++DIASEE CYGDKASLGSV DSWK+SQFE T+KGES + DDF QWAREMPF ER+SWAIGGMVLTAGL+FI
Sbjct: 32 SGKPSGVCVSQGGRFPPFKSEGGAPKNGPKDLTLCRIFRKKTCCDVTHTHPALLSVRKLASTGEATQECLHLWELLECSICDPRVGTQPGPPLICASLCERIYEACSNAYFSMDVKTQILAPCGVNDFVCGRAAEWVSNGTDLCLAAGFRVKPSDIVDIASEETSCYGDKASLGSVVDSWKASQFELTEKGESLRMLDDFQQWAREMPFGERVSWAIGGMVLTAGLMFI 260
BLAST of Ca_03658 vs. TrEMBL
Match: I1LB92_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 421.779 bits (1083), Expect = 1.912e-115 Identity = 197/236 (83.47%), Postives = 214/236 (90.68%), Query Frame = 1
Query: 280 SGKPNGVCVSQGGRFPPFKSEGLPPKSGPKDLTLCRVFRKKTCCDVSHTHPALLSVRKLASAGEASQECLHLWELLECAICDPHMGTRPGPPLICESLCERIYDACSNAYFSMDVKTQMLAPCGGNDFVCGRAAEWVSNGTDLCLAAGFRVK--QSDVIDIASEEIFCYGDKASLGSVADSWKSSQFESTKKGESSVIFDDFNQWAREMPFSERISWAIGGMVLTAGLVFISKRKS 981
SGKP+GVCVSQGGRFPPFKSEG PK GPKDLTLCR+FRKKTCCDV+HTHPALLSVRKLAS GEASQECLHLWELLEC+ICDP +GT+PGPPLIC SLCERIY+ACSNAYFSMDVKTQ+LAPCG NDFVCGRAAEWVSNGTDLCLAAGFRVK +SD++ IASEE CYGDKASLGSVADSWK+SQFE T+KGES + DDF QW REMPF E++SWAIGGMVLTAGLVFI +S
Sbjct: 34 SGKPSGVCVSQGGRFPPFKSEGSTPKKGPKDLTLCRIFRKKTCCDVTHTHPALLSVRKLASTGEASQECLHLWELLECSICDPRVGTQPGPPLICASLCERIYEACSNAYFSMDVKTQILAPCGVNDFVCGRAAEWVSNGTDLCLAAGFRVKPSESDIVHIASEETSCYGDKASLGSVADSWKASQFELTRKGESLRMLDDFQQWVREMPFGEKVSWAIGGMVLTAGLVFIRSERS 269
BLAST of Ca_03658 vs. TrEMBL
Match: C6T7F8_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 419.853 bits (1078), Expect = 7.265e-115 Identity = 196/231 (84.85%), Postives = 212/231 (91.77%), Query Frame = 1
Query: 280 SGKPNGVCVSQGGRFPPFKSEGLPPKSGPKDLTLCRVFRKKTCCDVSHTHPALLSVRKLASAGEASQECLHLWELLECAICDPHMGTRPGPPLICESLCERIYDACSNAYFSMDVKTQMLAPCGGNDFVCGRAAEWVSNGTDLCLAAGFRVK--QSDVIDIASEEIFCYGDKASLGSVADSWKSSQFESTKKGESSVIFDDFNQWAREMPFSERISWAIGGMVLTAGLVFI 966
SGKP+GVCVSQGGRFPPFKSEG PK GPKDLTLCR+FRKKTCCDV+HTHPALLSVRKLAS GEASQECLHLWELLEC+ICDP +GT+PGPPLIC SLCERIY+ACSNAYFSMDVKTQ+LAPCG NDFVCGRAAEWVSNGTDLCLAAGFRVK +SD++ IASEE CYGDKASLGSVADSWK+SQFE T+KGES + DDF QW REMPF E++SWAIGGMVLTAGLVFI
Sbjct: 34 SGKPSGVCVSQGGRFPPFKSEGSTPKKGPKDLTLCRIFRKKTCCDVTHTHPALLSVRKLASTGEASQECLHLWELLECSICDPRVGTQPGPPLICASLCERIYEACSNAYFSMDVKTQILAPCGVNDFVCGRAAEWVSNGTDLCLAAGFRVKPSESDIVHIASEETSCYGDKASLGSVADSWKASQFELTRKGESLRMLDDFQQWVREMPFGEKVSWAIGGMVLTAGLVFI 264
BLAST of Ca_03658 vs. TrEMBL
Match: D7U9Y5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g01740 PE=2 SV=1) HSP 1 Score: 396.356 bits (1017), Expect = 8.601e-108 Identity = 185/263 (70.34%), Postives = 218/263 (82.89%), Query Frame = 1
Query: 280 SGKPNGVCVSQGGRFPPFKSEGLPPKS---GPKDLTLCRVFRKKTCCDVSHTHPALLSVRKLASAGEASQECLHLWELLECAICDPHMGTRPGPPLICESLCERIYDACSNAYFSMDVKTQMLAPCGGNDFVCGRAAEWVSNGTDLCLAAGFRVKQSDVIDIASEEIFCYGDKASLGSVADSWKSSQFESTKKGESSVIFDDFNQWAREMPFSERISWAIGGMVLTAGLVFISKRKSNSQRQKLAAIKRTARKLGSRMVDQQP 1059
SGKP+GVC+S GGRFPPF SEG PPK GPKDLTLCRVFR+KTCCDVS THPALLS+R+LAS GEASQECL LWELLEC+ICDPH+G +PGPP+IC SLC++++ ACSNAYFSMD K Q+LAPCG DFVCGRA+EW+SNGTDLC A GF VK SD EE CYG KASL S+ADSWK+SQ E+ K E+ + DDF QW REM FSER+SWA+GGMVLTAGL+F+SKRKS++QRQKLAAI+RTA+KL +++ + P
Sbjct: 21 SGKPDGVCISPGGRFPPFSSEGKPPKKVSKGPKDLTLCRVFRRKTCCDVSQTHPALLSIRRLASTGEASQECLQLWELLECSICDPHVGVQPGPPVICTSLCDKVFQACSNAYFSMDAKRQVLAPCGVGDFVCGRASEWISNGTDLCHAVGFSVKPSDA---GMEETSCYGGKASLDSIADSWKASQSETPSKIENVGVLDDFQQWVREMAFSERVSWAVGGMVLTAGLLFLSKRKSHNQRQKLAAIQRTAKKLEAKINQKHP 280
BLAST of Ca_03658 vs. TrEMBL
Match: A5B7I0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043329 PE=2 SV=1) HSP 1 Score: 393.275 bits (1009), Expect = 7.282e-107 Identity = 183/262 (69.85%), Postives = 217/262 (82.82%), Query Frame = 1
Query: 283 GKPNGVCVSQGGRFPPFKSEGLPPKS---GPKDLTLCRVFRKKTCCDVSHTHPALLSVRKLASAGEASQECLHLWELLECAICDPHMGTRPGPPLICESLCERIYDACSNAYFSMDVKTQMLAPCGGNDFVCGRAAEWVSNGTDLCLAAGFRVKQSDVIDIASEEIFCYGDKASLGSVADSWKSSQFESTKKGESSVIFDDFNQWAREMPFSERISWAIGGMVLTAGLVFISKRKSNSQRQKLAAIKRTARKLGSRMVDQQP 1059
GKP+GVC+S GGRFPPF SEG PPK GPKDLTLCRVFR+KTCCDVS THPALLS+R+LAS GEASQECL LWELLEC+ICDPH+G +PGPP+IC SLC++++ ACSNAYFSMD K Q+LAPCG DFVCGRA+EW+SNGTDLC A GF VK SD EE CYG KASL S+ADSWK+SQ E+ K ++ + DDF QW REM FSER+SWA+GGMVLTAGL+F+SKRKS++QRQKLAAI+RTA+KL +++ + P
Sbjct: 89 GKPDGVCISPGGRFPPFSSEGKPPKKVSKGPKDLTLCRVFRRKTCCDVSQTHPALLSIRRLASTGEASQECLQLWELLECSICDPHVGVQPGPPVICTSLCDKVFQACSNAYFSMDAKRQVLAPCGVGDFVCGRASEWISNGTDLCHAVGFSVKPSDA---GMEETSCYGGKASLDSIADSWKASQSETPSKIKNVGVLDDFQQWVREMAFSERVSWAVGGMVLTAGLLFLSKRKSHNQRQKLAAIQRTAKKLEAKINQKHP 347
BLAST of Ca_03658 vs. DB:Swiss
Match: DRMH3_ARATH (Dormancy-associated protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g56220 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.395e-21 Identity = 46/70 (65.71%), Postives = 53/70 (75.71%), Query Frame = 1
Query: 1 MDLLDHLWDDTVAGPRPENGLVKLRKHPTFPNSPSISAKEAEGGNVRSYGGGT-AEEGMRVTRSIMIVKP 207
M LLDHLWDDTVAGPRPENGL KLRKH TF PS ++E G+ RSYG + EE ++VTRSIMI+KP
Sbjct: 1 MGLLDHLWDDTVAGPRPENGLGKLRKHHTFSFRPSSGNDQSEAGSARSYGEDSLPEEAVKVTRSIMIIKP 70 The following BLAST results are available for this feature:
BLAST of Ca_03658 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_03658 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 1
Expression
Available Analyses Select an Expression Analysis Select a property to group and sort biological samples Select a property to color biological samples Hover the mouse over a column in the graph to view more information about that biological sample. You can click and drag to rearrange groups along the x-axis. You can also click and drag to move the legend. InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_03658_v1.0_kabuli ID=Ca_03658_v1.0_kabuli; Name=Ca_03658; organism=Cicer arietinum; type=mRNA; length=1095bpback to top protein sequence of Ca_03658_v1.0_kabuli >Ca_03658_v1.0_kabuli ID=Ca_03658_v1.0_kabuli; Name=Ca_03658_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=364bpback to top mRNA from alignment at Ca4:5909030..5920708+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_03658_v1.0_kabuli ID=Ca_03658_v1.0_kabuli; Name=Ca_03658; organism=Cicer arietinum; type=mRNA; length=11679bp; location=Sequence derived from: Ca4:5909030..5920708+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca4:5909030..5920708+ >Ca_03658_v1.0_kabuli ID=Ca_03658_v1.0_kabuli; Name=Ca_03658; organism=Cicer arietinum; type=CDS; length=1095bp; location=Sequence derived from: Ca4:5909030..5920708+ (Cicer arietinumback to top |