Ca_03664, Ca_03664_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_03664
Unique NameCa_03664_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length1305
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca4chromosomeCa4:5849809..5855912 +Cicer arietinum CDC Frontier genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum CDC Frontier genome v1.02013-01-01
InterProScan analysis for kabuli C. arietinum unigenes2013-10-24
Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL2013-10-24
BLAST: C. arietinum CDC Frontier (kabuli), Swissprot2019-05-21
Expression: Chickpea heat stress response2023-09-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cavuR255Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR298Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR318Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR307Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR360Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR362Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0431Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0448Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0475Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0514Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0443Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0634Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0697Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0826Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0828Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0845Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1121Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL037Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL189Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL409Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL501Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR247Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR257Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR279Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR289Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR286Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
catifR335Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR344Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR345Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR347Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR349Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR262Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR288Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR361Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR332Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR366Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR373Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR380Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR240Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR280Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR282Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR118Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR121Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR125Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR131Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR157Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL136Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL257Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL377Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL481Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL542Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR275Cicer arietinum
cacarR278Cicer arietinum
cacarR286Cicer arietinum
cacarR342Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Vigun07g144300.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.model.Chr06.1121Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun06g099400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Tiffany.R1.3g072320.1Vicia faba cv. Tiffany genome v1.0Vicia faba
jg3275.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.5g178480.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Hedin2.R1.3g088120.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
LR48_mrnaVigan02g166400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Phvul.006G089200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Tiffany.R1.5g140000.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-TanjilR_21485Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_15602Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Va09G045680.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-KK1_006982Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_014658340.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-KK1_010446Cajanus cajan Asha genome v1.0Cajanus cajan
LR48_mrnaVigan09g149100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-TanjilR_22603Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.007G197300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat06G0408400-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Va02G051980.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_01056Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014663355.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg31027.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Psat03G0055200-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
evm.model.Chr07.1370Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-TanjilR_17600Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004494528.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_004495649.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_03664-CDS1Ca_03664-CDS1Cicer arietinumCDS
Ca_03664-CDS2Ca_03664-CDS2Cicer arietinumCDS
Ca_03664-CDS3Ca_03664-CDS3Cicer arietinumCDS
Ca_03664-CDS4Ca_03664-CDS4Cicer arietinumCDS
Ca_03664-CDS5Ca_03664-CDS5Cicer arietinumCDS
Ca_03664-CDS6Ca_03664-CDS6Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_03664_v1.0_kabuliCa_03664_v1.0_kabuliCicer arietinumpolypeptide


Homology
BLAST of Ca_03664 vs. TrEMBL
Match: G7I8Q2_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_1g083390 PE=4 SV=1)

HSP 1 Score: 749.969 bits (1935), Expect = 0.000e+0
Identity = 353/407 (86.73%), Postives = 372/407 (91.40%), Query Frame = 1
Query:   88 GSKFFGSVSCSICLDVVTDNGDRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFNMDDWTHDEDLYDLNYSEMSFGVHWCPFGNLTRLPSSYEEGEFSSTAYPDMMGQHAVFGEHTAVSSASHPCPYIAYFGPIHPXXXXXXXXXXEAPNFNHWNGSSVPNDMPTSYTFPAMDLHYHSWEHHSPPFSTASSRLVAADQPSASPGSQRPVRGGSDVPRSGSFMHPFLVGHSSAVRAGSSIGSSMIPPYPGSNARARDRVQALQAYYQPQQHPNSTTMRAPVASVTRRASSHSGST--LPVATSSDQSGGFFLIPSSSSSGRNFQEENYLPSRFHTWERDHLPSLSLSQADRDPGWRSYHQNTNRSDPSTRSGSFRLRHGSDRMPSQNR 1302
            G+K  GSVSCSICL+VVTDNGDRS AKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANG RSYPEF+MDDWTHDEDLYDL+YSEMSFGVHWCPFGN+ RLPSS+EEGEFSS AYPD++GQHA F EHTAVSSASHPCPY+AYFGPIHP          EAPNFNHWNGSSVP++MP SYTFPA+DLHYHSWEHH+PPFSTASSRLV ADQPS SP SQRPVRGGSDVPRSGSFMHPFLVGHSSA RAGSS+GSSMIPPYPGSNARARDRVQALQAYYQPQQHPNSTTMRAPV+SV RRASSHSGST   PVATS DQSGGFFLIP SSSSGRNFQEEN+LPSRFH WERDHLPSLSLSQ DRD GWR YHQ+ NRSDPSTRS +FRLRHGSDRMPSQ+R
Sbjct:   23 GNKSLGSVSCSICLEVVTDNGDRSFAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGSRSYPEFSMDDWTHDEDLYDLSYSEMSFGVHWCPFGNMARLPSSFEEGEFSSIAYPDIIGQHAAFAEHTAVSSASHPCPYVAYFGPIHPSSSNSGGAVSEAPNFNHWNGSSVPSEMPASYTFPAVDLHYHSWEHHTPPFSTASSRLVGADQPSVSPASQRPVRGGSDVPRSGSFMHPFLVGHSSAARAGSSMGSSMIPPYPGSNARARDRVQALQAYYQPQQHPNSTTMRAPVSSVPRRASSHSGSTQLAPVATSPDQSGGFFLIP-SSSSGRNFQEENHLPSRFHAWERDHLPSLSLSQGDRDSGWRPYHQSANRSDPSTRSNNFRLRHGSDRMPSQHR 428          
BLAST of Ca_03664 vs. TrEMBL
Match: I1NJ17_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 728.783 bits (1880), Expect = 0.000e+0
Identity = 344/412 (83.50%), Postives = 365/412 (88.59%), Query Frame = 1
Query:   76 GDGRGSKFFGSVSCSICLDVVTDNGDRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFNMDDWTHDEDLYDLNYSEMSFGVHWCPFGNLTRLPSSYEEGEFSSTAYPDMMGQHAVFGEHTAVSSASHPCPYIAYFGPIHPXXXXXXXXXXEAPNFNHWNGSSVPNDMPTSYTFPAMDLHYHSWEHHSPPFSTASSRLVAADQPSASPGSQRPVRGGSDVPRSGSFMHPFLVGHSSAVRAGSSIGSSMIPPYPGSNARARDRVQALQAYYQPQQHPNSTTMRAPVASVTRRASSHSGS--TLPVATSSDQSGGFFLIPSSSSSGRNFQEEN-YLPSRFHTWERDHLPSLSLSQADRDPGWRSYHQNTNRSDPSTRSGSFRLRHGSDRMPSQNR 1302
            GD  G K FGSVSCSICL+VV DNGDRS +KL CGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEF+MD+WTHDEDLYDL+YSEMSFGVHWCPFGNL RLPSS+EEGEFSS+AY D++GQHA+F EHTAVSSASHPCPYIAYFGPIHP          EA NFNHWNGSSVP+DMPTSYTFPA+DLHYHSWEHHSPPFSTASSRLVAADQPS SPGSQRP RGGSDVPRSGSFMHPFLVGHSSA R GSS+ SSMIPPYPGSNAR RDRVQALQAYYQPQQ PNSTTMR P+AS TRR+SSH+GS    P+ TSSDQSGGFFLIP SSSSG NFQEEN +LP+ FH WERDHLPSLSLS  DRD GWR+YHQ T+RSDP TRS SFRLRHGSDR PSQNR
Sbjct:   29 GDAGGGKSFGSVSCSICLEVVADNGDRSWSKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFSMDEWTHDEDLYDLSYSEMSFGVHWCPFGNLARLPSSFEEGEFSSSAYHDVLGQHAIFAEHTAVSSASHPCPYIAYFGPIHPSSSNSGGTVSEASNFNHWNGSSVPSDMPTSYTFPAVDLHYHSWEHHSPPFSTASSRLVAADQPSVSPGSQRPARGGSDVPRSGSFMHPFLVGHSSAARVGSSVASSMIPPYPGSNARTRDRVQALQAYYQPQQPPNSTTMRTPIASGTRRSSSHNGSPQLAPITTSSDQSGGFFLIP-SSSSGHNFQEENHHLPNHFHAWERDHLPSLSLSHVDRDSGWRAYHQATSRSDPGTRSSSFRLRHGSDRTPSQNR 439          
BLAST of Ca_03664 vs. TrEMBL
Match: I1LBA0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 726.857 bits (1875), Expect = 0.000e+0
Identity = 344/412 (83.50%), Postives = 367/412 (89.08%), Query Frame = 1
Query:   76 GDGRGSKFFGSVSCSICLDVVTDNGDRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFNMDDWTHDEDLYDLNYSEMSFGVHWCPFGNLTRLPSSYEEGEFSSTAYPDMMGQHAVFGEHTAVSSASHPCPYIAYFGPIHPXXXXXXXXXXEAPNFNHWNGSSVPNDMPTSYTFPAMDLHYHSWEHHSPPFSTASSRLVAADQPSASPGSQRPVRGGSDVPRSGSFMHPFLVGHSSAVRAGSSIGSSMIPPYPGSNARARDRVQALQAYYQPQQHPNSTTMRAPVASVTRRASSHSG--STLPVATSSDQSGGFFLIPSSSSSGRNFQEEN-YLPSRFHTWERDHLPSLSLSQADRDPGWRSYHQNTNRSDPSTRSGSFRLRHGSDRMPSQNR 1302
            GD  G K FGSVSCSICL+VV DNGDRS +KL CGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEF+MD+WTHDEDLYDL+YSEMSFGVHWCPFGNL RLPSS+EEGEFSS+AY D++GQHA+F EHTAVSSASHPCPYIAYFGPIHP          EA NFNHWNGSSVP+DMPTSYTFPA+DLHY SWEHHSPPFSTASSRLVAADQPS SPGSQRP RGGSDVPRSGSFMHPFLVGHSSA RAGSS+ SSMIPPYPGSNARARDRVQALQAYYQPQQ PNSTTMR P+AS TRR+SSH+G     P+ATS DQ GGFFLIP SSSSGRNFQEEN +LP+ FH WERDHLPSLSL+  DRD GWR+YHQ T+RSDP+TRS SFRLRHGSDRMPSQNR
Sbjct:   21 GDVGGGKSFGSVSCSICLEVVADNGDRSWSKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFSMDEWTHDEDLYDLSYSEMSFGVHWCPFGNLARLPSSFEEGEFSSSAYHDVLGQHAIFAEHTAVSSASHPCPYIAYFGPIHPSSSNSGGTVSEASNFNHWNGSSVPSDMPTSYTFPAVDLHYRSWEHHSPPFSTASSRLVAADQPSVSPGSQRPARGGSDVPRSGSFMHPFLVGHSSAARAGSSVASSMIPPYPGSNARARDRVQALQAYYQPQQPPNSTTMRTPIASGTRRSSSHNGPAQLAPMATSPDQGGGFFLIP-SSSSGRNFQEENHHLPNHFHAWERDHLPSLSLNHVDRDSGWRAYHQATSRSDPATRSSSFRLRHGSDRMPSQNR 431          
BLAST of Ca_03664 vs. TrEMBL
Match: I1NJ18_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 718.383 bits (1853), Expect = 0.000e+0
Identity = 341/412 (82.77%), Postives = 362/412 (87.86%), Query Frame = 1
Query:   76 GDGRGSKFFGSVSCSICLDVVTDNGDRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFNMDDWTHDEDLYDLNYSEMSFGVHWCPFGNLTRLPSSYEEGEFSSTAYPDMMGQHAVFGEHTAVSSASHPCPYIAYFGPIHPXXXXXXXXXXEAPNFNHWNGSSVPNDMPTSYTFPAMDLHYHSWEHHSPPFSTASSRLVAADQPSASPGSQRPVRGGSDVPRSGSFMHPFLVGHSSAVRAGSSIGSSMIPPYPGSNARARDRVQALQAYYQPQQHPNSTTMRAPVASVTRRASSHSGS--TLPVATSSDQSGGFFLIPSSSSSGRNFQEEN-YLPSRFHTWERDHLPSLSLSQADRDPGWRSYHQNTNRSDPSTRSGSFRLRHGSDRMPSQNR 1302
            GD  G K FGSVSCSICL+VV DNGDRS +KL CGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEF+MD+WTHDEDLYDL+YSEMSFGVHWCPFGNL RLPSS+EEGEFSS+AY D++GQHA+F EHTAVSSASHPCPYIAYFGPIHP          EA NFNHWNGSSVP+DMPTSYTFPA+DLHYHSWEHHSPPFSTASSRLVAADQPS SPGSQRP RGGSDVPRSGSFMHPFLVGH    R GSS+ SSMIPPYPGSNAR RDRVQALQAYYQPQQ PNSTTMR P+AS TRR+SSH+GS    P+ TSSDQSGGFFLIP SSSSG NFQEEN +LP+ FH WERDHLPSLSLS  DRD GWR+YHQ T+RSDP TRS SFRLRHGSDR PSQNR
Sbjct:   29 GDAGGGKSFGSVSCSICLEVVADNGDRSWSKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFSMDEWTHDEDLYDLSYSEMSFGVHWCPFGNLARLPSSFEEGEFSSSAYHDVLGQHAIFAEHTAVSSASHPCPYIAYFGPIHPSSSNSGGTVSEASNFNHWNGSSVPSDMPTSYTFPAVDLHYHSWEHHSPPFSTASSRLVAADQPSVSPGSQRPARGGSDVPRSGSFMHPFLVGH----RVGSSVASSMIPPYPGSNARTRDRVQALQAYYQPQQPPNSTTMRTPIASGTRRSSSHNGSPQLAPITTSSDQSGGFFLIP-SSSSGHNFQEENHHLPNHFHAWERDHLPSLSLSHVDRDSGWRAYHQATSRSDPGTRSSSFRLRHGSDRTPSQNR 435          
BLAST of Ca_03664 vs. TrEMBL
Match: K7LJI6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 716.457 bits (1848), Expect = 0.000e+0
Identity = 341/412 (82.77%), Postives = 364/412 (88.35%), Query Frame = 1
Query:   76 GDGRGSKFFGSVSCSICLDVVTDNGDRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFNMDDWTHDEDLYDLNYSEMSFGVHWCPFGNLTRLPSSYEEGEFSSTAYPDMMGQHAVFGEHTAVSSASHPCPYIAYFGPIHPXXXXXXXXXXEAPNFNHWNGSSVPNDMPTSYTFPAMDLHYHSWEHHSPPFSTASSRLVAADQPSASPGSQRPVRGGSDVPRSGSFMHPFLVGHSSAVRAGSSIGSSMIPPYPGSNARARDRVQALQAYYQPQQHPNSTTMRAPVASVTRRASSHSG--STLPVATSSDQSGGFFLIPSSSSSGRNFQEEN-YLPSRFHTWERDHLPSLSLSQADRDPGWRSYHQNTNRSDPSTRSGSFRLRHGSDRMPSQNR 1302
            GD  G K FGSVSCSICL+VV DNGDRS +KL CGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEF+MD+WTHDEDLYDL+YSEMSFGVHWCPFGNL RLPSS+EEGEFSS+AY D++GQHA+F EHTAVSSASHPCPYIAYFGPIHP          EA NFNHWNGSSVP+DMPTSYTFPA+DLHY SWEHHSPPFSTASSRLVAADQPS SPGSQRP RGGSDVPRSGSFMHPFLVGH    RAGSS+ SSMIPPYPGSNARARDRVQALQAYYQPQQ PNSTTMR P+AS TRR+SSH+G     P+ATS DQ GGFFLIP SSSSGRNFQEEN +LP+ FH WERDHLPSLSL+  DRD GWR+YHQ T+RSDP+TRS SFRLRHGSDRMPSQNR
Sbjct:   21 GDVGGGKSFGSVSCSICLEVVADNGDRSWSKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFSMDEWTHDEDLYDLSYSEMSFGVHWCPFGNLARLPSSFEEGEFSSSAYHDVLGQHAIFAEHTAVSSASHPCPYIAYFGPIHPSSSNSGGTVSEASNFNHWNGSSVPSDMPTSYTFPAVDLHYRSWEHHSPPFSTASSRLVAADQPSVSPGSQRPARGGSDVPRSGSFMHPFLVGH----RAGSSVASSMIPPYPGSNARARDRVQALQAYYQPQQPPNSTTMRTPIASGTRRSSSHNGPAQLAPMATSPDQGGGFFLIP-SSSSGRNFQEENHHLPNHFHAWERDHLPSLSLNHVDRDSGWRAYHQATSRSDPATRSSSFRLRHGSDRMPSQNR 427          
BLAST of Ca_03664 vs. TrEMBL
Match: I1NBW9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 672.929 bits (1735), Expect = 0.000e+0
Identity = 319/410 (77.80%), Postives = 347/410 (84.63%), Query Frame = 1
Query:   79 DGRGSKFFGSVSCSICLDVVTDNGDRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFNMDDWTHDEDLYDLNYSEMSFGVHWCPFGNLTRLPSSYEEGEFSSTAYPDMMGQHAVFGEHTAVSSASHPCPYIAYFGPIHPXXXXXXXXXXEAPNFNHWNGSSVPNDMPTSYTFPAMDLHYHSWEHHSPPFSTASSRLVAADQPSASPGSQRPVRGGSDVPRSGSFMHPFLVGHSSAVRAGSSIGSSMIPPYPGSNARARDRVQALQAYYQPQQHPNSTTMRAPVASVTRRASSHSG--STLPVATSSDQSGGFFLIPSSSSSGRNFQEENYLPSRFHTWERDHLPSLSLSQADRDPGWRSYHQNTNRSDPSTRSGSFRLRHGSDRMPSQNR 1302
            DG   K FGSV CSICL+ VTDNGDRS AKL CGHQFHLDCIGSAFNIKGAMQCPNCRK+EKGQWLYANGCRSYPEF+MD+WTHDEDLYDL+YSEMSFGVHWCPFGNLTRLPSS+EEG+FSSTAY D++GQHA+F EHTAVSSASHPCPYIAYFGPIHP          EA NFNHWNG  VP DMPTSYTFPA+DLHYHSWEH+S  FS+A+SRL  A+Q S SPGSQRP R GS+VPRSGSFMHPFLVGHSSA RAG+S+ SSMIPPYPGSNARARDRVQALQAYYQPQQ  NSTT+R PVAS TRR+SSHSG     PVA+  DQS GF  IP S SSGRNFQEE +LPSRFH WER+HLPSL+L+   R+  WR+YHQ  + SDPS RS SFRLRH SDRMPSQNR
Sbjct:    9 DGDTLKSFGSVCCSICLEAVTDNGDRSWAKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKVEKGQWLYANGCRSYPEFSMDEWTHDEDLYDLSYSEMSFGVHWCPFGNLTRLPSSFEEGDFSSTAYHDVLGQHAIFAEHTAVSSASHPCPYIAYFGPIHPSTSNSGGTVSEASNFNHWNGPPVPGDMPTSYTFPAVDLHYHSWEHNSSHFSSANSRLGTAEQASVSPGSQRPARVGSEVPRSGSFMHPFLVGHSSAARAGNSVASSMIPPYPGSNARARDRVQALQAYYQPQQPHNSTTIRTPVASSTRRSSSHSGPVQLAPVASPPDQSAGFVYIP-SGSSGRNFQEETHLPSRFHAWEREHLPSLALNNVGRESSWRAYHQTASVSDPSIRSSSFRLRHESDRMPSQNR 417          
BLAST of Ca_03664 vs. TrEMBL
Match: I1JR99_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 662.144 bits (1707), Expect = 0.000e+0
Identity = 316/410 (77.07%), Postives = 343/410 (83.66%), Query Frame = 1
Query:   79 DGRGSKFFGSVSCSICLDVVTDNGDRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFNMDDWTHDEDLYDLNYSEMSFGVHWCPFGNLTRLPSSYEEGEFSSTAYPDMMGQHAVFGEHTAVSSASHPCPYIAYFGPIHPXXXXXXXXXXEAPNFNHWNGSSVPNDMPTSYTFPAMDLHYHSWEHHSPPFSTASSRLVAADQPSASPGSQRPVRGGSDVPRSGSFMHPFLVGHSSAVRAGSSIGSSMIPPYPGSNARARDRVQALQAYYQPQQHPNSTTMRAPVASVTRRASSHSGST--LPVATSSDQSGGFFLIPSSSSSGRNFQEENYLPSRFHTWERDHLPSLSLSQADRDPGWRSYHQNTNRSDPSTRSGSFRLRHGSDRMPSQNR 1302
            DG   K FGSV CSICL+ VTDNGDRS AKL CGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEF+MD+WTHDEDLYD++YSEMSFGVHWCPFGNLTRLPSS+EEG+FSS AY DM+GQ A+F EHTAVSSASHPCPYIAYFGPIHP          EA NFNHWNG  VP DMPTSYTFPA+DLHYHSWEH+S  FS+A+SRL  ++Q S SPGSQRP RGGSDVPRSGSFMHPFLVGHSSA RAG+S+ SSMIPPYPGSNARARDRVQALQAYYQPQ   NS T+R PVAS TRR+SSHSGS    PVA+S D+S GF  IP S SSG NFQEE +LPSRFH  ER+HLPSL L+   R+  WR+YHQ  + SDPS RS SFRLRH SDRMPSQNR
Sbjct:    9 DGDTHKSFGSVPCSICLEAVTDNGDRSWAKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFSMDEWTHDEDLYDVSYSEMSFGVHWCPFGNLTRLPSSFEEGDFSSIAYHDMLGQQAIFAEHTAVSSASHPCPYIAYFGPIHPSTSNSGLTVSEASNFNHWNGPPVPGDMPTSYTFPAVDLHYHSWEHNSSHFSSANSRLGTSEQTSVSPGSQRPARGGSDVPRSGSFMHPFLVGHSSAARAGNSVASSMIPPYPGSNARARDRVQALQAYYQPQLPHNSATIRTPVASSTRRSSSHSGSVQLAPVASSPDRSAGFVYIP-SGSSGHNFQEETHLPSRFHAREREHLPSLPLNHVGRESSWRAYHQTASVSDPSIRSSSFRLRHESDRMPSQNR 417          
BLAST of Ca_03664 vs. TrEMBL
Match: F6I4M0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g02280 PE=4 SV=1)

HSP 1 Score: 618.231 bits (1593), Expect = 1.805e-174
Identity = 298/414 (71.98%), Postives = 332/414 (80.19%), Query Frame = 1
Query:   76 GDGRGSKFFGS-VSCSICLDVVTDNGDRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFNMDDWTHDEDLYDLNYSEMSFGVHWCPFGNLTRLPSSYEEGEFSSTAYPDMMGQHAVFGEHTAVSSASHPCPYIAYFGPIHPXXXXXXXXXXEAPNF-NHWNGSSVPNDMPTSYTFPAMDLHYHSWEHHSPPFSTASSRLVAADQPSASPGSQRPVRGGSDVPRSGSFMHPFLVGHSSAVRAGSSIGSSMIPPYPGSNARARDRVQALQAYYQPQQHPNSTTMRAPVASVTRRASSHSG--STLPVATSSDQSGGFFLIPSSSSSGRNFQE-ENYLPSRFHTWERDHLPSLSLSQADRDPGWRSYHQNTNRSDPSTRSGSFRLRHGSDRMPSQNR 1302
            GDG G  F  S VSCSICL++VTDNGDR+ AKL CGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCR++PEFNMDD THDEDLYD +YSEMSFGVHWCPF  LTRLPSS++EG+FSST+Y D++GQHA+F EHTAVSSA+HPCPYIAYFGPIHP          +  NF NHWNG SVP+++PTSY FP MD HYHSWEHHSPPFST SSR + ADQPS  P +QRP R  SD+PRSGSFMHPFLVGHSS  RAGSS+ SSMIPPYPGSNARARDRVQALQAYYQ QQ  NS  MR P+ S TRR+ SH G     PVA+SSDQS GF+  P S +SGRNFQE EN LP+RFH WER+HLPS  L+Q +RD GW ++HQ  + SD   R  SFR RHGSDR  SQNR
Sbjct:   12 GDGEGKAFAASSVSCSICLEIVTDNGDRAWAKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRTFPEFNMDDLTHDEDLYD-SYSEMSFGVHWCPFSGLTRLPSSFDEGDFSSTSYNDLLGQHAIFAEHTAVSSATHPCPYIAYFGPIHPSSSNSSGSVSDGSNFNNHWNGPSVPSEIPTSYAFPTMDFHYHSWEHHSPPFSTNSSR-IGADQPSIPPVTQRPARANSDIPRSGSFMHPFLVGHSSGARAGSSVASSMIPPYPGSNARARDRVQALQAYYQQQQPSNSPAMRTPMISGTRRSGSHRGLAQVGPVASSSDQSSGFYFFP-SGTSGRNFQEAENPLPTRFHGWEREHLPSFPLTQVERDSGWGAFHQAGSGSDSGIRPSSFRQRHGSDRTSSQNR 422          
BLAST of Ca_03664 vs. TrEMBL
Match: M5WAY7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005981mg PE=4 SV=1)

HSP 1 Score: 607.831 bits (1566), Expect = 2.439e-171
Identity = 295/415 (71.08%), Postives = 330/415 (79.52%), Query Frame = 1
Query:   76 GDGRGSKFFG-SVSCSICLDVVTDNGDRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFNMDDWTHDEDLYDLNYSEMSFGVHWCPFGNLTRLPSSYEEGEFSSTAYPDMMGQHAVFGEHTAVSSASHPCPYIAYFGPIHPXXXXXXXXXXEAPNFN-HWNGSSVPNDMPTSYTFPAMDLHYHSWEHHS-PPFSTASSRLVAADQPSASPGSQRPVRGGSDVPRSGSFMHPFLVGHSSAVRAGSSIGSSMIPPYPGSNARARDRVQALQAYYQPQQHPNSTTMRAPVASVTRRASSHSG--STLPVATSSDQSGGFFLIPSSSSSGRNFQE-ENYLPSRFHTWERDHLPSLSLSQADRDPGWRSYHQNTNRSDPSTRSGSFRLRHGSDRMPSQNR 1302
            G G G K +G SVSCSICL+VV DNGDRS AKL CGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANG RS  EF +DDWTHDEDLYDL YSEMSFGVHWCPFG+L RLPSS+EEGEFS T+Y D++GQHA+F EHTAVSSA HPCPYIAYFGPIHP          EA NFN HW+G+SVP+++P SY FPAMDLHYHSWEHHS PPFST ++ +  A+Q S    +QR  R  SD+PRSGSFMHPFLVGHSS+ RAGSS+ SSMIPPYPGSNARARDRVQALQAYYQ QQ  NS TMR P+    RR+SS  G     PVA+SSDQ+GGF+  P S SSGRN+QE EN LP+RFH WERDHLPS S++Q DRD GW + HQ  + SD + R  SFR RHGS+R PSQNR
Sbjct:   20 GGGCGGKSYGGSVSCSICLEVVADNGDRSWAKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGYRSIQEFGVDDWTHDEDLYDLGYSEMSFGVHWCPFGSLARLPSSFEEGEFSPTSYHDLLGQHAIFAEHTAVSSAGHPCPYIAYFGPIHPSSSNSSGSVSEASNFNHHWSGTSVPSEIPNSYAFPAMDLHYHSWEHHSPPPFSTTNNHIGGAEQGSIPSVTQRSARPSSDLPRSGSFMHPFLVGHSSSARAGSSVTSSMIPPYPGSNARARDRVQALQAYYQQQQPSNSPTMRTPIIQGARRSSSQRGVAQVGPVASSSDQNGGFYFFP-SGSSGRNYQEAENPLPNRFHAWERDHLPSFSMNQVDRDQGWAAVHQGGSGSDSAMRGNSFRQRHGSERTPSQNR 433          
BLAST of Ca_03664 vs. TrEMBL
Match: B9RFB9_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1433520 PE=4 SV=1)

HSP 1 Score: 596.66 bits (1537), Expect = 5.623e-168
Identity = 290/414 (70.05%), Postives = 330/414 (79.71%), Query Frame = 1
Query:   76 GDGRGSKFFGSVSCSICLDVVTDNGDRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSYPEFNMDDWTHDEDLYDLNYSEMSFGVHWCPFGNLTRLPSSYEEGEFSSTAYPDMMGQHAVFGEHT-AVSSASHPCPYIAYFGPIHPXXXXXXXXXXEAPNF-NHWNGSSVPNDMPTSYTFPAMDLHYHSWEHHSPPFSTASSRLVAADQPSASPGSQRPVRGGSDVPRSGSFMHPFLVGHSSAVRAGSSIGSSMIPPYPGSNARARDRVQALQAYYQPQQHPNSTTMRAPVASVTRRASSHSGSTL--PVATSSDQSGGFFLIPSSSSSGRNFQE-ENYLPSRFHTWERDHLPSLSLSQADRDPGWRSYHQNTNRSDPSTRSGSFRLRHGSDRMPSQNR 1302
            G G   K FGSVSCSICLDVVTDNGDRS AKL CGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRS PEF+MDDW HDEDLYDL+YSEMSFGVHWCPFG+L RLPSS+EEGEFSS AY D++G HA+F EHT AVSSA+HPCPYIAYFGP+HP          +  NF NHW+G SVP ++P+SY FPA+DLHYH WEHHSPPFST+SSR+ + DQPS  P SQRP R  SD+ RSGSFMHPFLVGHSS+ RAGSS+ S+MIPPY GSNARARDRVQALQAYYQ QQ  +S  + AP+ S TRR+S++ G +   PVA+SSDQ+G +F+ P   +SGRNFQE +N  P RF  WERDHL   SLSQ DR+  W  +HQ  + SDP  RS SFR RHG++RM SQNR
Sbjct:   20 GGGGCGKSFGSVSCSICLDVVTDNGDRSWAKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSLPEFSMDDWAHDEDLYDLSYSEMSFGVHWCPFGSLARLPSSFEEGEFSSNAYHDLLGHHAIFAEHTAAVSSATHPCPYIAYFGPVHPSSSNSSGSVSDGSNFNNHWSGPSVPGELPSSYAFPAIDLHYHGWEHHSPPFSTSSSRIGSTDQPSIQPVSQRPARSSSDLSRSGSFMHPFLVGHSSSARAGSSVSSTMIPPYQGSNARARDRVQALQAYYQ-QQPGSSPAIHAPIISGTRRSSNYRGLSQVGPVASSSDQTGFYFVPP--GTSGRNFQEADNSPPIRFRAWERDHLQPFSLSQVDRESSW-LFHQTASGSDPGLRSSSFRQRHGTERMSSQNR 429          
BLAST of Ca_03664 vs. DB:Swiss
Match: RFI2_ARATH (E3 ubiquitin-protein ligase RFI2 OS=Arabidopsis thaliana OX=3702 GN=RFI2 PE=1 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 6.797e-66
Identity = 144/369 (39.02%), Postives = 194/369 (52.57%), Query Frame = 1
Query:  109 VSCSICLDVVTDNGDRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANG-CRSYPEFNMDDWTHDEDLYDLNYSEMSFGVHWCPFGNLTRLPSSYEEGEFSSTAY-PDMMGQHAVFGEHTAVSSASHPCPYIAYFGPIHPXXXXXXXXXXEAPNFNHWNGSSVPNDMPTSYTFPAMDLHYH------SWEHHSPPFSTASSRLVAADQPSASPGSQRPVRGGSDVPRSGSFMHPFLVGHSSAVRAGSSIGSSMIPPYPGSNARARDRVQALQAYYQPQQHPNSTTMRAPVASVTRRASSHSGSTLPVATSSDQSGGFFLIPSSSSSGRNFQEENYLPSRFHTWERDHLPSLSLSQADR 1191
            VSCSICL+ V D+G RS AKL CGHQFHLDCIGSAFN+KGAMQCPNCR +EKGQWLYANG  R +PEF+M+DW  +EDLY L+Y EM + VHWCPFG L++  +S+EE E ++T Y  +  G HA    H+          Y+AY GP    ++    S + + + + WN  S  ND            H+H       + HHSP FS  ++ +V  +  S++              R   + HPFL  H S  R+  +I S     Y GS+ + R++  A     Q Q H N  T+ +P+ S+TRR               DQ+ GFF+ P     G + + E     + H WERD  P   +    R
Sbjct:   36 VSCSICLESVLDDGTRSKAKLQCGHQFHLDCIGSAFNMKGAMQCPNCRNVEKGQWLYANGSTRPFPEFSMEDWIPEEDLYGLSYPEMQYRVHWCPFGELSQAAASFEELEPATTTYHTEFHGHHAAAVNHS----------YLAYVGP--GPAATPRTSDNNSTDDHPWNSHS--ND------------HFHQLPVAPQYHHHSPSFSLPAAHVVDGEVDSSA-------------ARGLPYAHPFLFSHRSNQRSSPAINS-----YQGSSTQMREQHHAYNHQRQ-QHHANGPTLASPLISMTRRGLPPPPPP---PPMPDQNVGFFIYP-----GGHHEPET---DQIHAWERDWFPHFPVPSNHR 348          
The following BLAST results are available for this feature:
BLAST of Ca_03664 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7I8Q2_MEDTR0.000e+086.73Putative uncharacterized protein OS=Medicago trunc... [more]
I1NJ17_SOYBN0.000e+083.50Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I1LBA0_SOYBN0.000e+083.50Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I1NJ18_SOYBN0.000e+082.77Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
K7LJI6_SOYBN0.000e+082.77Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I1NBW9_SOYBN0.000e+077.80Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I1JR99_SOYBN0.000e+077.07Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
F6I4M0_VITVI1.805e-17471.98Putative uncharacterized protein OS=Vitis vinifera... [more]
M5WAY7_PRUPE2.439e-17171.08Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
B9RFB9_RICCO5.623e-16870.05DNA binding protein, putative OS=Ricinus communis ... [more]

Pages

back to top
BLAST of Ca_03664 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
RFI2_ARATH6.797e-6639.02E3 ubiquitin-protein ligase RFI2 OS=Arabidopsis th... [more]
back to top
Expression

Available Analyses

Select an Expression Analysis

Select a property to group and sort biological samples

Select a property to color biological samples

Hover the mouse over a column in the graph to view more information about that biological sample. You can click and drag to rearrange groups along the x-axis. You can also click and drag to move the legend.

Only Non-Zero Values | Reset

Download expression dataset for this feature
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184Ring fingercoord: 39..83
score: 4.1
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 39..84
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10no descriptioncoord: 37..86
score: 1.9
NoneNo IPR availablePANTHERPTHR22764FAMILY NOT NAMEDcoord: 24..296
score: 4.2e
NoneNo IPR availablePANTHERPTHR22764:SF26SUBFAMILY NOT NAMEDcoord: 24..296
score: 4.2e
NoneNo IPR availablePFAMPF13639zf-RING_2coord: 38..85
score: 2.4
NoneNo IPR availableSEGsegsegcoord: 6..25
score: NAcoord: 186..195
score
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 34..99
score: 1.8
NoneNo IPR availableSEGsegsegcoord: 5..22
score
NoneNo IPR availableSEGsegsegcoord: 12..26
score
NoneNo IPR availableSEGsegsegcoord: 28..39
score
NoneNo IPR availableSEGsegsegcoord: 46..55
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_03664_v1.0_kabuli ID=Ca_03664_v1.0_kabuli; Name=Ca_03664; organism=Cicer arietinum; type=mRNA; length=1305bp
ATGGGTCTTGGTAAAGACGAGGAAGAGGATATTAAAATTCACAATCATCA
TAATCATAATAAGGTTGTGGATGAAGGAGATGGTCGAGGAAGCAAGTTTT
TTGGTTCAGTGTCTTGTTCAATTTGTCTCGATGTTGTTACCGATAATGGA
GATAGATCCTTGGCTAAGCTTCTTTGTGGACATCAATTTCATCTTGATTG
CATTGGTTCGGCATTCAATATAAAAGGAGCAATGCAATGCCCTAATTGTC
GGAAGATTGAGAAAGGTCAGTGGCTTTATGCTAACGGCTGTCGGTCATAT
CCAGAATTCAACATGGATGACTGGACGCATGATGAGGACCTATATGATTT
AAACTACTCTGAAATGTCCTTTGGAGTTCATTGGTGCCCATTCGGCAACC
TGACACGACTTCCATCATCTTACGAGGAAGGTGAATTTTCATCAACTGCA
TATCCTGATATGATGGGACAACATGCTGTATTTGGTGAACATACAGCTGT
ATCATCTGCTAGTCATCCTTGTCCGTATATTGCTTACTTTGGACCAATAC
ACCCATCCTCCTCCAATTCGGGTGGATCTGTATCAGAAGCACCTAACTTC
AATCATTGGAATGGCTCATCTGTGCCTAATGACATGCCAACCTCCTACAC
ATTTCCTGCCATGGATCTTCATTATCACAGTTGGGAGCACCATTCCCCTC
CTTTCTCGACTGCAAGCAGTCGTCTAGTTGCTGCTGATCAACCCTCGGCG
TCACCAGGTAGTCAAAGGCCAGTTAGGGGTGGTTCGGATGTACCAAGATC
AGGATCTTTTATGCATCCTTTTCTTGTTGGTCACAGTTCTGCTGTCAGAG
CAGGTAGCTCAATTGGTTCCTCAATGATCCCTCCTTATCCCGGTAGCAAT
GCTCGAGCTCGTGATAGAGTGCAGGCACTTCAGGCATACTATCAACCACA
GCAACATCCTAACTCAACTACAATGCGGGCACCTGTTGCTTCTGTCACCC
GAAGAGCTAGCAGTCACAGTGGTTCAACTCTACCAGTGGCCACATCATCA
GACCAAAGTGGTGGCTTCTTCCTTATCCCATCAAGTTCATCATCAGGACG
TAATTTCCAAGAAGAAAACTATCTACCAAGTCGCTTCCATACTTGGGAAA
GAGATCACTTGCCTTCGTTGTCATTGAGCCAAGCTGATAGAGATCCAGGC
TGGAGATCATACCACCAAAACACCAACAGGTCAGACCCAAGTACCAGGTC
TGGCAGCTTTCGTTTAAGGCACGGATCAGATAGAATGCCGTCACAAAATC
GGTAA
back to top

protein sequence of Ca_03664_v1.0_kabuli

>Ca_03664_v1.0_kabuli ID=Ca_03664_v1.0_kabuli; Name=Ca_03664_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=434bp
MGLGKDEEEDIKIHNHHNHNKVVDEGDGRGSKFFGSVSCSICLDVVTDNG
DRSLAKLLCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSY
PEFNMDDWTHDEDLYDLNYSEMSFGVHWCPFGNLTRLPSSYEEGEFSSTA
YPDMMGQHAVFGEHTAVSSASHPCPYIAYFGPIHPSSSNSGGSVSEAPNF
NHWNGSSVPNDMPTSYTFPAMDLHYHSWEHHSPPFSTASSRLVAADQPSA
SPGSQRPVRGGSDVPRSGSFMHPFLVGHSSAVRAGSSIGSSMIPPYPGSN
ARARDRVQALQAYYQPQQHPNSTTMRAPVASVTRRASSHSGSTLPVATSS
DQSGGFFLIPSSSSSGRNFQEENYLPSRFHTWERDHLPSLSLSQADRDPG
WRSYHQNTNRSDPSTRSGSFRLRHGSDRMPSQNR
back to top

mRNA from alignment at Ca4:5849809..5855912+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_03664_v1.0_kabuli ID=Ca_03664_v1.0_kabuli; Name=Ca_03664; organism=Cicer arietinum; type=mRNA; length=6104bp; location=Sequence derived from: Ca4:5849809..5855912+ (Cicer arietinum
ATGGGTCTTGGTAAAGACGAGGAAGAGGATATTAAAATTCACAATCATCA TAATCATAATAAGGTTGTGGATGAAGGAGATGGTCGAGGAAGCAAGTTTT TTGGTTCAGTGTCTTGTTCAATTTGTCTCGATGTTGTTACCGATAATGGA GATAGATCCTTGGCTAAGCTTCTTTGTGGACATCAATTTCATCTTGGTAA CTTTCATCTCTCTCTCTCTCTCTCTCAAGGCATGCAAATTCGATGGAATT TTACCATTTTATTGGTTTGAACTTTGAACTACAACAATTGAGATCTACGT TTTGTTTTTTAAGCTTTTCCCGTTACTATGCATGACTTTGATTCTTTGTT ATATATGTTTATTGCTTTTGGAGGTTATGAAACCATATGAGTTTTGCAGT TTATTTTATAGGATCCTGTTGCTTTGTTTGTTTAGTGATTCTGATTTGTG GTTATTTGAAGAAAGGTAGCTATTGTGAATAATTGTTGCGATTGGATGTT TATCTCTCTTTTGGAAACTATGGAATTTGATCCGTTACACGTGCTGTTTG ATGTTGTTCCGGATTTTGATTCTTGTGAAGTTAGCTTTTAATGATGGAAT TGTGGGCATGTAGATCAATTTTCGTGATTTATAGTGGATAGAAATTGATC TTTATCTAAGCCAAAGTTGGAAATTATGTTGGTCTTGTTGAATTGCTGTT ACTCTAATCGAGACATTTTGACTAACTTGCCGTGAAATTGGAGGAATTTC TGATTGACATATGCAGTTTTCTTGTGGAGTCATGGTTAGCCGTATGCATT GATTGGATCATGTATAATTTGAGGTTATAGTGTCTACTTAAAAACTTCGG AAGACAGTTTTCAGGTGCTTTGTGCAAAAAAACAATTTAAGAATTACACC GAACATGAAACTTATGCAGAAGTTTGATTATGGAATTATATTATCATTGA TGGCTAAGTTTTGTTATGTAATTTTTTATATATATATACTGCTGTTACGC TGAATTGTAGATAATGGGATTGCAAATAACGGGATGGTGCTATTATGAAT TTTTGTTATACAAATTATATGACGATAAAAAGCATAGGTGGCTTAACAGG ACTGAGACTGATCGGTGAGGAGGGATACAATGGAATGACTGAGGCATCAT GTGCCAGAGTCGGTAGAAGGTGAGGTCGTGACCAAGAATCTGTAGAGATG CATAAATTCAATGAAATTGGCAATTACTTTTGGTATATTGATGGTTGTCG TTAAAAATTGATCTCAAGTGACCTTTACCTAGACCTCCTTGTACCCCAAC CATCTAATGTATTCTGTGGCGGGCATGCGGAAAGAGAAAACATTTAATGC TGTGCAGAATTACCAATAGCATGCGATAGTAGGGCTATCAAGCTGTCATG GGAGCTGAGCGGCTAGTGGCCTCTATTTAGACTTGGTTGTGTCTTATTTT TAATTAGTGGCTGATGCCACGACGCTATGCATGCAAAAAGGCTGAGATGA TGAAATCATCTGAAAACCCCACTCTATTACTGCATGATCCATTGCTTTTT GGTGACCTTGCTACCACAACCTGGTGTTTTTTGCCCAGTGCCTTCACATG TAGAGAAGAAACGAAGAAGCAAGAAAAACAACGAAAATACAAGAAGAAAC GAAGGAGGAGAAGAAAGATGCATGTATGTGTTAGGACTTGGATTACAGTA CACAATAGTGCAGCAGTTAGTTATGGCAGTAAGAGAGCTGTGTACGTTTT ATTTAGAAGAAGACATTTCATTTTCAGATTAAGGGTTTGGGTTTCACGTT ATGGGCTTATAATAAGCCCAACAATGGGCCGGGTATTTCTTTTTGGTGAA TGTTCATGTCTTGTGAAATAAAAATTGAAAAACATCCCTATCACAGAATT GTGAGTAACTCTTGAGCATTTATACATATATTATTAATTACTGAATTTTT ATAGAAAATTTAGAATAGTAGTCATTTTGCTATGTGCTATCCCGCTATAT CGTTTCGACCCCATTGGTTCCTATCTGCGATTAATAACAATGGTTGTGCT TGTTTTAAGGCAATTCTTCTTGCTTTCATGTTTTTACTTGAATCTATTTC AAACAAGCCGATAGCTCCTATTTGTTAGTTATCATATTTTTGTACTTAAT ATACTTTCTTTATGTCATGTAGATTGCATTGGTTCGGCATTCAATATAAA AGGAGCAATGCAATGCCCTAATTGTCGGAAGATTGAGAAAGGTCAGTGGC TTTATGCTAACGGCTGTCGGTCATATCCAGAATTCAACATGGATGACTGG ACGCATGATGAGGACCTATATGATTTAAACTACTCTGAAATGGTAAATTC CTATCAGATTTATGTTTTCTTGGAATTTTATTTCATACTTGCTGAAGAGC TCGACACAGATGCTTCTTTTAAGAAGAGTAAATCTTGACCATATAGTCAC CACATTGATGGTTAAGATTGAAGTTATTTAATGACGACATGGTTATTTAA AAGTCATATGACTTTATGTTTAATTTTTACTGTTCATGGTTCGATGTAGT AGTATAGATTTACTTCTTTCACTCTCATATGAAAAAGACTCTTGATAGAG CGAGAGGAATTTACAAACGTGTTCTTTGCTTGACTTTATCAAAAACAAAA AGGTTTTGGGGAGTGATCAACATCGTGCCTATTTGCATTAGCATGCCTAC TGACTACATGAAGTTATTTGAAAGTTATAGCTGGGAGCAAAAGAAAAGTT ATTTAGCTACTCAAATTATTACTTCGTAATCATATCAGACCTGATATTAG TTTCAACTTCATCTACCATATGCCTTCATACGTAGACCTTTTGTTAATCT GTAAGCAAGTCAAAGCCTACTACCACTGCACCACTATTATCTGCCAATGC ATTATTTTACTCCATTGCCATTTATAGTACATAAATGATGTAGACAAAAT CGAATCTTCTACGTGTAAGTGGTTGGTGTTTCAAGGCTGTCAAGGTTGCC ACAACCTCTTTTATTTGAAATTATTTCTTGTTCCCTTTTATTATCTTGAT AGACAATTTTTTGCTGTCCATTGACTACATTTTCCCCTAAATGGTTTCTG CAGTCCTTTGGAGTTCATTGGTGCCCATTCGGCAACCTGACACGACTTCC ATCATCTTACGAGTAAGCACAATTAACATTCCACAAATACAAACTTATCT CTTTGAATTTAGAGGCTTGAACTTGTCATTTGTCATACATATTATTTTGT TCTTTGGCTGGTTTGTAGACATTCTTTGGTGGTATTGGTGCTGTCTGTGA CTTTTTACTAATCCAATTTGGTTCCACTTTCATCACATAACCATATATAT AAGTGGTTGTTGCAATGAGAAGTAAGTGATCACTAAAATCATGTGTTTGA TTTTATTATGGAACCTAATTCGGATAGTTGAAGTCAAATGTGGTTGAATT TTAGAAACATTCTTTTGGTAAATAGGCGAAATATATTTACACGTATTAAG ATTTTGTAGGCAGTAGCATCATTAAATTCAAAGTTGGTTTCTTAGTTGCT CGGTTAAGTATTTATTCCAAAAAAAGAAATTATTTCCAATTGTTTAATCC AGAGTATGACTTCTGGCGTAGTTGCTTGGGAATCATCATAAGCACATGGA CTTGTCCATTTTTGGTAGAAACTGTCAAATTTTCAGTGAAGTTGCTTGAG TTTAACTCATACAACTTGTAGTTTCAACTAATGGGGAAACCATTGTGACT GATTGGTCTGACTGTTTCTTCATGGGTATCCATCAGGTCTGAATTCTTTT ACCATCTATTCGTGGAGGCTGGCATTTTTGCTTACTGCACTCCACAACTC ACACACATTAATGTTTTGCTTTGGGATAGTCGTCATTTGTCACTAAAGTG GATAAGCAAGCAAGGGTGAATTTAAAGACCGGCTCACTTTAGATGATGAC CTTTGTTTGTTGCTTTGCTATTGCTGCCACCGTAGTATCTGTAATAATGC ACTTTGAAGTACCCGTCTTTGCTACCTCCTGTCCTTTTCTTCCTTTGTAA TGTAATTGACTAATTTTTTATGACACTATGACTATGCTAGACCCAACTGG CATTATTACAGAAAAATGGAGAAGAAACCCCTTTGATTACAAAATAATGG CAGCTCTTTGAGGGTTTTCTCACCTCCCAATGCGAAAAAGACCCTAAATT ACTCAATTTACAAGATGCCTCCGTCTCTAATAACTTCTCTCTATTTATAG GCAGCATGCATCATTGGACCTACCTATCTCTCAACACACTAACAAACTAA TTAACCCAACCTAATTAACTAACTAACAATAACAGACCTATCAGAGTACT CTTTATCACAGCTGCAACAGAAGGCTCAGCTAAAGTACATATTTTATTCT TTTAAGTTGGCCTCGACGGCTTGTATTACATTCTTGGCTAAATTTCAGTT CATTTCTTGTTATTGCACTTGAAGCTTGTATGAACGGCTGTTGCATATTT ATTATTGAATTTAATCTAGGTCTAATAGGCTGTTAATCATACTTTTGATG TGTTGAGCTATAAAAGATTTCCCTTACAAATGTGCTCTAATTAGATTGTT AAAATGGGATGCACCCTTTTGGTTGGCTTGCCTCTCCTTTGCCAAAGGTG GAACTTCATAGTGCTATATGTTTTGTATTGTGTTGAATGCTCTAGCCAAA TTGACCTAGCTTGCTCAATATGTTGGCTAATAAATAATGATTTAACTTTT TAATGTTTCTTAAATTTAGGCTTTTTGAGAGTATCCCTTCACCCACCCAC ACACACACACCAAAGAAAATGTTAGGTTGTTTATGCAACTTATATTTATG CTCCTGATTTTTCCAGGGAAGGTGAATTTTCATCAACTGCATGTAAGATA TCCCTTTTCCTTCTAATAACGCCTCCCCATTTTTTAAGTTGACCCTTGTA TGCACCAGATACATTAATTTACTGAAATTATGAGATGCAGATCCTGATAT GATGGGACAACATGCTGTATTTGGTGAACATACAGCTGTATCATCTGCTA GTCATCCTTGTCCGTATATTGCTTACTTTGGACCAATACACCCATCCTCC TCCAATTCGGGTGGATCTGTATCAGAAGCACCTAACTTCAATCATTGGAA TGGCTCATCTGTGCCTAATGACATGCCAACCTCCTACACATTTCCTGCCA TGGATCTTCATTATCACAGTTGGGAGCACCATTCCCCTCCTTTCTCGACT GCAAGCAGTCGTCTAGTTGCTGCTGATCAACCCTCGGCGTCACCAGGTAG TCAAAGGCCAGTTAGGGGTGGTTCGGATGTACCAAGATCAGGATCTTTTA TGCATCCTTTTCTTGTTGGTCACAGGTAGGTACCTCTTTAGAATCAATTC ATCCCTTTCTCAAGTGAGTGAATCGCTCACATGTAATTTGATGTAATATA TACCAATTTTTCGGTCCTATGGGATTTAAGTATGCAATTAATTTTGGCTA TATGTAAGCTAATTGATAAAAAATGATGGATCTCGGTATCTTTATTGGCT AGTAGAAATTTGCTCATGAGATTGATATTGGAAGCTTTATTGTTTGAGTT ATAACAAGCATTTGATGCACATTTAATTTCTGCAGTTCTGCTGTCAGAGC AGGTAGCTCAATTGGTTCCTCAATGATCCCTCCTTATCCCGGTAGCAATG CTCGAGCTCGTGATAGAGTGCAGGCACTTCAGGCATACTATCAACCACAG CAACATCCTAACTCAACTACAATGCGGGCACCTGTTGCTTCTGTCACCCG AAGAGCTAGCAGTCACAGTGGTTCAACTCTACCAGTGGCCACATCATCAG ACCAAAGTGGTGGCTTCTTCCTTATCCCATCAAGTTCATCATCAGGACGT AATTTCCAAGAAGAAAACTATCTACCAAGTCGCTTCCATACTTGGGAAAG AGATCACTTGCCTTCGTTGTCATTGAGCCAAGCTGATAGAGATCCAGGCT GGAGATCATACCACCAAAACACCAACAGGTCAGACCCAAGTACCAGGTCT GGCAGCTTTCGTTTAAGGCACGGATCAGATAGAATGCCGTCACAAAATCG GTAA
back to top

Coding sequence (CDS) from alignment at Ca4:5849809..5855912+

>Ca_03664_v1.0_kabuli ID=Ca_03664_v1.0_kabuli; Name=Ca_03664; organism=Cicer arietinum; type=CDS; length=1305bp; location=Sequence derived from: Ca4:5849809..5855912+ (Cicer arietinum
ATGGGTCTTGGTAAAGACGAGGAAGAGGATATTAAAATTCACAATCATCA
TAATCATAATAAGGTTGTGGATGAAGGAGATGGTCGAGGAAGCAAGTTTT
TTGGTTCAGTGTCTTGTTCAATTTGTCTCGATGTTGTTACCGATAATGGA
GATAGATCCTTGGCTAAGCTTCTTTGTGGACATCAATTTCATCTTGATTG
CATTGGTTCGGCATTCAATATAAAAGGAGCAATGCAATGCCCTAATTGTC
GGAAGATTGAGAAAGGTCAGTGGCTTTATGCTAACGGCTGTCGGTCATAT
CCAGAATTCAACATGGATGACTGGACGCATGATGAGGACCTATATGATTT
AAACTACTCTGAAATGTCCTTTGGAGTTCATTGGTGCCCATTCGGCAACC
TGACACGACTTCCATCATCTTACGAGGAAGGTGAATTTTCATCAACTGCA
TATCCTGATATGATGGGACAACATGCTGTATTTGGTGAACATACAGCTGT
ATCATCTGCTAGTCATCCTTGTCCGTATATTGCTTACTTTGGACCAATAC
ACCCATCCTCCTCCAATTCGGGTGGATCTGTATCAGAAGCACCTAACTTC
AATCATTGGAATGGCTCATCTGTGCCTAATGACATGCCAACCTCCTACAC
ATTTCCTGCCATGGATCTTCATTATCACAGTTGGGAGCACCATTCCCCTC
CTTTCTCGACTGCAAGCAGTCGTCTAGTTGCTGCTGATCAACCCTCGGCG
TCACCAGGTAGTCAAAGGCCAGTTAGGGGTGGTTCGGATGTACCAAGATC
AGGATCTTTTATGCATCCTTTTCTTGTTGGTCACAGTTCTGCTGTCAGAG
CAGGTAGCTCAATTGGTTCCTCAATGATCCCTCCTTATCCCGGTAGCAAT
GCTCGAGCTCGTGATAGAGTGCAGGCACTTCAGGCATACTATCAACCACA
GCAACATCCTAACTCAACTACAATGCGGGCACCTGTTGCTTCTGTCACCC
GAAGAGCTAGCAGTCACAGTGGTTCAACTCTACCAGTGGCCACATCATCA
GACCAAAGTGGTGGCTTCTTCCTTATCCCATCAAGTTCATCATCAGGACG
TAATTTCCAAGAAGAAAACTATCTACCAAGTCGCTTCCATACTTGGGAAA
GAGATCACTTGCCTTCGTTGTCATTGAGCCAAGCTGATAGAGATCCAGGC
TGGAGATCATACCACCAAAACACCAACAGGTCAGACCCAAGTACCAGGTC
TGGCAGCTTTCGTTTAAGGCACGGATCAGATAGAATGCCGTCACAAAATC
GGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding