Ca_03668, Ca_03668_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_03668
Unique NameCa_03668_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length363
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca4chromosomeCa4:5823201..5823563 +Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR253Pisum sativum Cameor genome v1aPisum sativum
capsR263Pisum sativum Cameor genome v1aPisum sativum
capsR277Pisum sativum Cameor genome v1aPisum sativum
cavuR255Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR298Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR318Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR307Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR360Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR362Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0431Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0448Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0475Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0514Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0443Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0634Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0697Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0826Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0828Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0845Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1121Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL037Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL189Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL409Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL501Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR247Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR257Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR279Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR289Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR286Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
catifR335Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR344Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR345Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR347Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR349Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR262Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR288Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR361Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR332Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR366Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR373Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR380Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR240Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR280Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR282Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR118Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR121Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR125Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR131Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR157Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL136Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL257Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL377Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL481Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL542Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR275Cicer arietinum
cacarR278Cicer arietinum
cacarR286Cicer arietinum
cacarR342Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-KK1_004385Cajanus cajan Asha genome v1.0Cajanus cajan
jg31466.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.5g140320.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-TanjilR_17601Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.007G197000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Phvul.006G089900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Phvul.001G205701.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun06g100100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-KK1_010454Cajanus cajan Asha genome v1.0Cajanus cajan
evm.model.Chr06.1127Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Psat03G0054000-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun07g144700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Tiffany.R1.4g145920.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-TanjilR_15600Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun01g190200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_014640150.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_014657392.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-KK1_006985Cajanus cajan Asha genome v1.0Cajanus cajan
Vfaba.Hedin2.R1.5g178800.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat03G0099800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
LR48_mrnaVigan09g149700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
LR48_mrnaVigan03g286000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_014662641.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr01.1811Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
jg19919.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
LR48_mrnaVigan02g166700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-TanjilR_22604Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Va09G045740.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg31016.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Psat3g022600.1Pisum sativum Cameor genome v1aPisum sativum
evm.model.Chr07.1366Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-KK1_027238Cajanus cajan Asha genome v1.0Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004494540.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_004508161.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_004495652.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_004494305.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_03668-CDS1Ca_03668-CDS1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_03668_v1.0_kabuliCa_03668_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_03668 vs. SwissProt
Match: RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 4.052e-31
Identity = 61/75 (81.33%), Postives = 70/75 (93.33%), Query Frame = 1 
Query:  139 CEGSIAECL-EDDEFELDSEINRRILANTKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRCRS 360
            C+GSI EC+ E++EFELDSE NRRILA  KYISYGALQ+N+VPCSRRGASYYNC+PGA+ANPY+RGCSAITRCRS
Sbjct:   41 CKGSIGECIAEEEEFELDSESNRRILATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRCRS 115
[Close]
BLAST of Ca_03668 vs. SwissProt
Match: RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 3.431e-30
Identity = 61/76 (80.26%), Postives = 68/76 (89.47%), Query Frame = 1 
Query:  139 CEGSIAEC---LEDDEFELDSEINRRILANTKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRCR 357
            C G+IAEC     ++EFE+DSEINRRILA TKYISYGAL+RNTVPCSRRGASYYNCR GA+ANPY+RGCSAITRCR
Sbjct:   40 CNGTIAECSLSTAEEEFEMDSEINRRILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115
[Close]
BLAST of Ca_03668 vs. SwissProt
Match: RLF1_ARATH (Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.477e-28
Identity = 56/74 (75.68%), Postives = 65/74 (87.84%), Query Frame = 1 
Query:  139 CEGSIAECLEDDEFELDSEINRRILANTKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRCRS 360
            C GSIAEC+  +E E+DSEINRRILA TKYISY +L+RN+VPCSRRGASYYNC+ GA+ANPY+RGCS I RCRS
Sbjct:   47 CHGSIAECIGAEEEEMDSEINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120
[Close]
BLAST of Ca_03668 vs. SwissProt
Match: RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.594e-27
Identity = 55/74 (74.32%), Postives = 66/74 (89.19%), Query Frame = 1 
Query:  139 CEGSIAECL-EDDEFELDSEINRRILANTKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRCR 357
            C GSIAEC+ E++E E DS+I+RRILA  KYISYGA++RN+VPCSRRGASYYNC+ GA+ANPY+RGCS ITRCR
Sbjct:   45 CTGSIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCR 118
[Close]
BLAST of Ca_03668 vs. SwissProt
Match: RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.081e-27
Identity = 62/99 (62.63%), Postives = 71/99 (71.72%), Query Frame = 1 
Query:  112 GWLPLTKAVCEGSIAEC-----LED------------DEFELDSEINRRILANTKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRCR 357
            G  P  +  C G+IAEC     L D            +EFE+DSEINRRILA  +YISYGAL+RNT+PCSRRGASYYNCR GA+ANPY+RGCSAITRCR
Sbjct:   38 GDFPPFETECRGTIAECSVSAALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 136
[Close]
BLAST of Ca_03668 vs. SwissProt
Match: RLF4_ARATH (Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.550e-17
Identity = 47/82 (57.32%), Postives = 56/82 (68.29%), Query Frame = 1 
Query:  121 PLTKAVCEGSIAECL-EDDEFE--LDSEINRRILAN-TKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRC 354
            PLTK+   G    C+ EDDE E  +DSE NRR LA   +YI Y AL++N VPCSRRG SYY+C+   + NPY RGCSAIT C
Sbjct:   26 PLTKSCINGQ--GCIGEDDELESLMDSETNRRQLARGRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHC 105
[Close]
BLAST of Ca_03668 vs. SwissProt
Match: RLF19_ARATH (Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.420e-17
Identity = 44/81 (54.32%), Postives = 56/81 (69.14%), Query Frame = 1 
Query:  124 LTKAVCEGSIAECLEDD---EFELDSEINRRILANTK-YISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRC 354
            LTK+   G    C+ +D   ++ +DSE NRR LA  + YISYGAL++N VPCSRRG SYY+C+   +ANPY RGCS IT C
Sbjct:   27 LTKSCVNGQ--GCIGEDGELDYLMDSETNRRQLAARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHC 105
[Close]
BLAST of Ca_03668 vs. SwissProt
Match: RLF24_ARATH (Protein RALF-like 24 OS=Arabidopsis thaliana GN=RALFL24 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.977e-13
Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 1 
Query:  166 EDDEFELDSEINRRILANTK-YISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRC 354
            E+ E  + SEI+RR++   K YISY  L+R+ VPC + GASYY CR G +AN YNRGCS ITRC
Sbjct:   47 EEGEEMMPSEISRRVMMMRKQYISYETLRRDMVPCQKPGASYYACRSG-QANAYNRGCSVITRC 109
[Close]
BLAST of Ca_03668 vs. SwissProt
Match: RLF31_ARATH (Protein RALF-like 31 OS=Arabidopsis thaliana GN=RALFL31 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.470e-12
Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 1 
Query:  169 DDEFELDSEINRRIL-ANTKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRC 354
            +DE  + +EI+RR+L A  +YI Y  L+R+ VPC + GASYY+CR G +AN Y+RGC  ITRC
Sbjct:   43 EDEDLMPTEISRRVLMAQKRYIGYETLRRDMVPCQKPGASYYDCRSG-QANSYSRGCDTITRC 104
[Close]
BLAST of Ca_03668 vs. SwissProt
Match: RLF34_ARATH (Protein RALF-like 34 OS=Arabidopsis thaliana GN=RALFL34 PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 4.820e-8
Identity = 37/66 (56.06%), Postives = 41/66 (62.12%), Query Frame = 1 
Query:  181 ELDSEINRRIL--ANTKY-ISYGALQRNTVPCS-RRGASYY--NC-RPGAKANPYNRGCSAITRCR 357
            E D   +RR L    TKY ISYGAL  N VPC  R G SYY  NC R     +PY+RGCS+ITRCR
Sbjct:   63 EDDGVTDRRSLYWRRTKYYISYGALSANRVPCPPRSGRSYYTHNCFRARGPVHPYSRGCSSITRCR 128
[Close]
BLAST of Ca_03668 vs. TrEMBL
Match: I1NJ14_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 5.750e-38
Identity = 82/120 (68.33%), Postives = 89/120 (74.17%), Query Frame = 1 
Query:    1 MANSSSLTFXXXXXXXXXXXXSFSRTAVAGGDHQLGMGWLPLTKAVCEGSIAECLEDDEFELDSEINRRILANTKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRCRS 360
            MA SSSL              S   TAV GGDH LGMGW+  T   C+G+IAECL  +E+ELDSEINRRILA  KYISY ALQRNT PCSRRGASYYNCRPGA+ANPY+RGCSAITRCRS
Sbjct:    1 MAKSSSLAITLICAATVLVAMSRWPTAVGGGDHHLGMGWVSST---CKGTIAECLGGEEYELDSEINRRILATNKYISYVALQRNTAPCSRRGASYYNCRPGAQANPYSRGCSAITRCRS 117
[Close]
BLAST of Ca_03668 vs. TrEMBL
Match: I1LBA3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 2.185e-37
Identity = 83/121 (68.60%), Postives = 89/121 (73.55%), Query Frame = 1 
Query:    1 MANSSSLTFXXXXXXXXXXXXSFSRTAVAGG-DHQLGMGWLPLTKAVCEGSIAECLEDDEFELDSEINRRILANTKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRCRS 360
            MA S SL              S   TAV GG DH LGMGW     + C+GSIAECL  +E+ELDSEINRRILA  KYISYGALQRNTVPCSRRGASYYNCRPGA+ANPY+RGCSAITRCRS
Sbjct:    1 MAKSCSLAMMLISAATVLVAMSRWPTAVGGGGDHHLGMGWA----STCKGSIAECLGGEEYELDSEINRRILATNKYISYGALQRNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRCRS 117
[Close]
BLAST of Ca_03668 vs. TrEMBL
Match: M5W0U6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013461mg PE=4 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 4.120e-36
Identity = 70/99 (70.71%), Postives = 84/99 (84.85%), Query Frame = 1 
Query:   70 SRTAVAGGDHQLGMGWLPLTKAVCEGSIAECLE--DDEFELDSEINRRILANTKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRCRS 360
            S + +A GDH   + W+P   + C+GSIAECL   D+EF+LDSEINRRILA +KYISYGA+QRNTVPCSRRGASYYNC+PGA++NPY+RGCSAITRCRS
Sbjct:   23 SSSVIASGDHHPNLSWMPTNNSACKGSIAECLAAGDEEFDLDSEINRRILATSKYISYGAMQRNTVPCSRRGASYYNCQPGAQSNPYSRGCSAITRCRS 121
[Close]
BLAST of Ca_03668 vs. TrEMBL
Match: M5VTQ6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020353mg PE=4 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 2.261e-34
Identity = 69/95 (72.63%), Postives = 82/95 (86.32%), Query Frame = 1 
Query:   76 TAVAGGDHQLGMGWLPLTKAVCEGSIAECLEDDEFELDSEINRRILANTKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRCRS 360
            T  AG DH  G+ W+P  +  C+GSIAEC+ DDEF++DS+INRRILA ++YISYGALQRNTVPCSRRGASYYNC+PGA++NPYNRGCSAI RCRS
Sbjct:   12 TVHAGSDH--GLSWVP-GRTRCQGSIAECMADDEFDMDSQINRRILATSQYISYGALQRNTVPCSRRGASYYNCKPGAESNPYNRGCSAIARCRS 103
[Close]
BLAST of Ca_03668 vs. TrEMBL
Match: F6HDF3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01490 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.122e-33
Identity = 68/90 (75.56%), Postives = 79/90 (87.78%), Query Frame = 1 
Query:   91 GDH-QLGMGWLPLTKAVCEGSIAECLEDDEFELDSEINRRILANTKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRCR 357
            GDH Q  +GW+P  ++ C+GSIAECL  +EFE+DSEINRRILA+ +YISYGAL RN+VPCSRRGASYYNCRPGA+ANPY RGCSAITRCR
Sbjct:   29 GDHLQFQLGWIP-ARSACQGSIAECLAGEEFEMDSEINRRILASKRYISYGALSRNSVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR 117
[Close]
BLAST of Ca_03668 vs. TrEMBL
Match: A5BUA5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037723 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.122e-33
Identity = 68/90 (75.56%), Postives = 79/90 (87.78%), Query Frame = 1 
Query:   91 GDH-QLGMGWLPLTKAVCEGSIAECLEDDEFELDSEINRRILANTKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRCR 357
            GDH Q  +GW+P  ++ C+GSIAECL  +EFE+DSEINRRILA+ +YISYGAL RN+VPCSRRGASYYNCRPGA+ANPY RGCSAITRCR
Sbjct:   29 GDHLQFQLGWIP-ARSACQGSIAECLAGEEFEMDSEINRRILASKRYISYGALSRNSVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR 117
[Close]
BLAST of Ca_03668 vs. TrEMBL
Match: Q84UC9_9ROSI (Rapid alkalinization factor 1 OS=Populus trichocarpa x Populus deltoides GN=RALF1 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.914e-33
Identity = 71/100 (71.00%), Postives = 83/100 (83.00%), Query Frame = 1 
Query:   70 SRTAVAGGDHQLGMGWLPLTKA-VCEGSIAECLEDD--EFELDSEINRRILANTKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRCRS 360
            S T    GDH LG  W+P T++ VC+GSIAEC+ +D  EFE+D+EINRRILA TKY+SYGALQRN VPCSRRGASYYNC+ GA+ANPY+RGCS ITRCRS
Sbjct:   23 SSTVQGSGDHHLG--WIPATRSSVCKGSIAECMAEDGEEFEMDTEINRRILATTKYVSYGALQRNNVPCSRRGASYYNCQRGAQANPYSRGCSRITRCRS 120
[Close]
BLAST of Ca_03668 vs. TrEMBL
Match: A9PCI6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_671680 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.914e-33
Identity = 71/100 (71.00%), Postives = 83/100 (83.00%), Query Frame = 1 
Query:   70 SRTAVAGGDHQLGMGWLPLTKA-VCEGSIAECLEDD--EFELDSEINRRILANTKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRCRS 360
            S T    GDH LG  W+P T++ VC+GSIAEC+ +D  EFE+D+EINRRILA TKY+SYGALQRN VPCSRRGASYYNC+ GA+ANPY+RGCS ITRCRS
Sbjct:   23 SSTVQGSGDHHLG--WIPATRSSVCKGSIAECMAEDGEEFEMDTEINRRILATTKYVSYGALQRNNVPCSRRGASYYNCQRGAQANPYSRGCSRITRCRS 120
[Close]
BLAST of Ca_03668 vs. TrEMBL
Match: A5BYD6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g00110 PE=4 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 4.264e-33
Identity = 72/101 (71.29%), Postives = 82/101 (81.19%), Query Frame = 1 
Query:   67 FSRTAVAGGDHQLGMGWLPLTKAV--CEGSIAECLED-DEFELDSEINRRILANTKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRCRS 360
            F+ +  AGGD    + W P  KA   C+GSIAECL   DEFE+D+EINRRILA T+YISYGALQRNTVPCS+RGASYYNC+PGA+ANPYNRGCS ITRCRS
Sbjct:   19 FTASVSAGGDFSQ-LNWEPAAKAAATCQGSIAECLAGRDEFEMDTEINRRILATTQYISYGALQRNTVPCSQRGASYYNCKPGAEANPYNRGCSTITRCRS 118
[Close]
BLAST of Ca_03668 vs. TrEMBL
Match: A2Q327_MEDTR (Rapid ALkalinization Factor OS=Medicago truncatula GN=MTR_7g113080 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 5.569e-33
Identity = 74/103 (71.84%), Postives = 84/103 (81.55%), Query Frame = 1 
Query:   64 SFSRTAVAGGDHQLG-MGWLPLTK-AVCEGSIAECL---EDDEFELDSEINRRILANTKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRCR 357
            S S T  A G  +LG M W+  TK A CEGSIA+C+    ++EF+ D+EINRRILA TKYISYGALQRNTVPCSRRGASYYNCRPGA+ANPY+RGCSAITRCR
Sbjct:   24 SSSPTVDAAGGFELGGMEWIHQTKTATCEGSIADCMLQQGEEEFQFDNEINRRILATTKYISYGALQRNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRCR 126
[Close]
BLAST of Ca_03668 vs. DB:Swiss
Match: RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.009e-38
Identity = 62/84 (73.81%), Postives = 74/84 (88.10%), Query Frame = 1 
Query:  115 WLPLTKAVCEGSIAEC---LEDDEFELDSEINRRILANTKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRCR 357
            ++P+ ++ C G+IAEC     ++EFE+DSEINRRILA TKYISYGAL+RNTVPCSRRGASYYNCR GA+ANPY+RGCSAITRCR
Sbjct:   33 FVPI-ESKCNGTIAECSLSTAEEEFEMDSEINRRILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115
[Close]
BLAST of Ca_03668 vs. DB:Swiss
Match: RLF1_ARATH (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.950e-35
Identity = 56/74 (75.68%), Postives = 65/74 (87.84%), Query Frame = 1 
Query:  139 CEGSIAECLEDDEFELDSEINRRILANTKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRCRS 360
            C GSIAEC+  +E E+DSEINRRILA TKYISY +L+RN+VPCSRRGASYYNC+ GA+ANPY+RGCS I RCRS
Sbjct:   47 CHGSIAECIGAEEEEMDSEINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120
[Close]
BLAST of Ca_03668 vs. DB:Swiss
Match: RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.373e-34
Identity = 58/75 (77.33%), Postives = 67/75 (89.33%), Query Frame = 1 
Query:  139 CEGSIAECLEDDEFE-LDSEINRRILANTKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRCRS 360
            C+GSI EC+ ++E   LDSE NRRILA  KYISYGALQ+N+VPCSRRGASYYNC+PGA+ANPY+RGCSAITRCRS
Sbjct:   41 CKGSIGECIAEEEEFELDSESNRRILATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRCRS 115
[Close]
BLAST of Ca_03668 vs. DB:Swiss
Match: RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 9.833e-31
Identity = 62/99 (62.63%), Postives = 70/99 (70.71%), Query Frame = 1 
Query:  112 GWLPLTKAVCEGSIAEC-----LED--DEF----------ELDSEINRRILANTKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRCR 357
            G  P  +  C G+IAEC     L D  D F          E+DSEINRRILA  +YISYGAL+RNT+PCSRRGASYYNCR GA+ANPY+RGCSAITRCR
Sbjct:   38 GDFPPFETECRGTIAECSVSAALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 136
[Close]
BLAST of Ca_03668 vs. DB:Swiss
Match: RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.426e-27
Identity = 45/58 (77.59%), Postives = 53/58 (91.38%), Query Frame = 1 
Query:  184 LDSEINRRILANTKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRCR 357
             DS+I+RRILA  KYISYGA++RN+VPCSRRGASYYNC+ GA+ANPY+RGCS ITRCR
Sbjct:   61 FDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCR 118
[Close]
BLAST of Ca_03668 vs. DB:Swiss
Match: RLF4_ARATH (Protein RALF-like 4 OS=Arabidopsis thaliana OX=3702 GN=RALFL4 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.702e-21
Identity = 47/82 (57.32%), Postives = 56/82 (68.29%), Query Frame = 1 
Query:  121 PLTKAVCEGSIAECL-EDDEFE--LDSEINRRILAN-TKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRC 354
            PLTK+   G    C+ EDDE E  +DSE NRR LA   +YI Y AL++N VPCSRRG SYY+C+   + NPY RGCSAIT C
Sbjct:   26 PLTKSCINGQ--GCIGEDDELESLMDSETNRRQLARGRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHC 105
[Close]
BLAST of Ca_03668 vs. DB:Swiss
Match: RLF19_ARATH (Protein RALF-like 19 OS=Arabidopsis thaliana OX=3702 GN=RALFL19 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.976e-20
Identity = 44/81 (54.32%), Postives = 56/81 (69.14%), Query Frame = 1 
Query:  124 LTKAVCEGSIAECLEDD---EFELDSEINRRILANTK-YISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRC 354
            LTK+   G    C+ +D   ++ +DSE NRR LA  + YISYGAL++N VPCSRRG SYY+C+   +ANPY RGCS IT C
Sbjct:   27 LTKSCVNGQ--GCIGEDGELDYLMDSETNRRQLAARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHC 105
[Close]
BLAST of Ca_03668 vs. DB:Swiss
Match: RLF31_ARATH (Protein RALF-like 31 OS=Arabidopsis thaliana OX=3702 GN=RALFL31 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.741e-15
Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 1 
Query:  169 DDEFELDSEINRRIL-ANTKYISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRC 354
            +DE  + +EI+RR+L A  +YI Y  L+R+ VPC + GASYY+CR G +AN Y+RGC  ITRC
Sbjct:   43 EDEDLMPTEISRRVLMAQKRYIGYETLRRDMVPCQKPGASYYDCRSG-QANSYSRGCDTITRC 104
[Close]
BLAST of Ca_03668 vs. DB:Swiss
Match: RLF24_ARATH (Protein RALF-like 24 OS=Arabidopsis thaliana OX=3702 GN=RALFL24 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.845e-15
Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 1 
Query:  190 SEINRRILANTK-YISYGALQRNTVPCSRRGASYYNCRPGAKANPYNRGCSAITRC 354
            SEI+RR++   K YISY  L+R+ VPC + GASYY CR G +AN YNRGCS ITRC
Sbjct:   55 SEISRRVMMMRKQYISYETLRRDMVPCQKPGASYYACRSG-QANAYNRGCSVITRC 109
[Close]
BLAST of Ca_03668 vs. DB:Swiss
Match: RLF34_ARATH (Protein RALF-like 34 OS=Arabidopsis thaliana OX=3702 GN=RALFL34 PE=2 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 1.141e-8
Identity = 37/66 (56.06%), Postives = 41/66 (62.12%), Query Frame = 1 
Query:  181 ELDSEINRRILA--NTKY-ISYGALQRNTVPCS-RRGASYY--NC-RPGAKANPYNRGCSAITRCR 357
            E D   +RR L    TKY ISYGAL  N VPC  R G SYY  NC R     +PY+RGCS+ITRCR
Sbjct:   63 EDDGVTDRRSLYWRRTKYYISYGALSANRVPCPPRSGRSYYTHNCFRARGPVHPYSRGCSSITRCR 128
The following BLAST results are available for this feature:
BLAST of Ca_03668 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RALF_TOBAC4.052e-3181.33Rapid alkalinization factor OS=Nicotiana tabacum G... [more]
RLF33_ARATH3.431e-3080.26Protein RALF-like 33 OS=Arabidopsis thaliana GN=RA... [more]
RLF1_ARATH5.477e-2875.68Protein RALF-like 1 OS=Arabidopsis thaliana GN=RAL... [more]
RLF22_ARATH1.594e-2774.32Protein RALF-like 22 OS=Arabidopsis thaliana GN=RA... [more]
RLF23_ARATH2.081e-2762.63Rapid alkalinization factor 23 OS=Arabidopsis thal... [more]
RLF4_ARATH2.550e-1757.32Protein RALF-like 4 OS=Arabidopsis thaliana GN=RAL... [more]
RLF19_ARATH7.420e-1754.32Protein RALF-like 19 OS=Arabidopsis thaliana GN=RA... [more]
RLF24_ARATH4.977e-1357.81Protein RALF-like 24 OS=Arabidopsis thaliana GN=RA... [more]
RLF31_ARATH2.470e-1253.97Protein RALF-like 31 OS=Arabidopsis thaliana GN=RA... [more]
RLF34_ARATH4.820e-856.06Protein RALF-like 34 OS=Arabidopsis thaliana GN=RA... [more]
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BLAST of Ca_03668 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
I1NJ14_SOYBN5.750e-3868.33Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I1LBA3_SOYBN2.185e-3768.60Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
M5W0U6_PRUPE4.120e-3670.71Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
M5VTQ6_PRUPE2.261e-3472.63Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
F6HDF3_VITVI1.122e-3375.56Putative uncharacterized protein OS=Vitis vinifera... [more]
A5BUA5_VITVI1.122e-3375.56Putative uncharacterized protein OS=Vitis vinifera... [more]
Q84UC9_9ROSI1.914e-3371.00Rapid alkalinization factor 1 OS=Populus trichocar... [more]
A9PCI6_POPTR1.914e-3371.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A5BYD6_VITVI4.264e-3371.29Putative uncharacterized protein OS=Vitis vinifera... [more]
A2Q327_MEDTR5.569e-3371.84Rapid ALkalinization Factor OS=Medicago truncatula... [more]

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BLAST of Ca_03668 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RLF33_ARATH1.009e-3873.81Protein RALF-like 33 OS=Arabidopsis thaliana OX=37... [more]
RLF1_ARATH1.950e-3575.68Protein RALF-like 1 OS=Arabidopsis thaliana OX=370... [more]
RALF_TOBAC1.373e-3477.33Rapid alkalinization factor OS=Nicotiana tabacum O... [more]
RLF23_ARATH9.833e-3162.63Rapid alkalinization factor 23 OS=Arabidopsis thal... [more]
RLF22_ARATH1.426e-2777.59Protein RALF-like 22 OS=Arabidopsis thaliana OX=37... [more]
RLF4_ARATH2.702e-2157.32Protein RALF-like 4 OS=Arabidopsis thaliana OX=370... [more]
RLF19_ARATH1.976e-2054.32Protein RALF-like 19 OS=Arabidopsis thaliana OX=37... [more]
RLF31_ARATH1.741e-1553.97Protein RALF-like 31 OS=Arabidopsis thaliana OX=37... [more]
RLF24_ARATH3.845e-1562.50Protein RALF-like 24 OS=Arabidopsis thaliana OX=37... [more]
RLF34_ARATH1.141e-856.06Protein RALF-like 34 OS=Arabidopsis thaliana OX=37... [more]
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Expression

Available Analyses

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Download expression dataset for this feature
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008801Rapid ALkalinization FactorPFAMPF05498RALFcoord: 58..119
score: 3.6
NoneNo IPR availableSEGsegsegcoord: 10..21
score
NoneNo IPR availableSEGsegsegcoord: 14..26
score: NAcoord: 58..69
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_03668_v1.0_kabuli ID=Ca_03668_v1.0_kabuli; Name=Ca_03668; organism=Cicer arietinum; type=mRNA; length=363bp
ATGGCAAACTCATCTTCCTTAACCTTCATCATGATCTGCGCCGCCGCCAT
ATTATTGGCTATGAGTTTCTCCCGGACCGCCGTCGCTGGTGGGGACCACC
AATTGGGAATGGGATGGTTACCCTTAACGAAGGCAGTTTGCGAAGGCTCC
ATAGCGGAGTGCCTGGAAGATGACGAGTTTGAGCTTGATTCTGAGATCAA
CCGGCGCATCTTAGCCAATACCAAGTACATCAGCTATGGTGCGCTGCAGA
GGAACACTGTCCCATGCTCTCGTCGCGGTGCTTCCTACTACAATTGTCGA
CCAGGAGCTAAGGCTAACCCTTACAACCGTGGTTGCAGTGCCATTACGAG
GTGCAGGAGCTAA
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protein sequence of Ca_03668_v1.0_kabuli

>Ca_03668_v1.0_kabuli ID=Ca_03668_v1.0_kabuli; Name=Ca_03668_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=120bp
MANSSSLTFIMICAAAILLAMSFSRTAVAGGDHQLGMGWLPLTKAVCEGS
IAECLEDDEFELDSEINRRILANTKYISYGALQRNTVPCSRRGASYYNCR
PGAKANPYNRGCSAITRCRS
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mRNA from alignment at Ca4:5823201..5823563+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_03668_v1.0_kabuli ID=Ca_03668_v1.0_kabuli; Name=Ca_03668; organism=Cicer arietinum; type=mRNA; length=363bp; location=Sequence derived from: Ca4:5823201..5823563+ (Cicer arietinum
ATGGCAAACTCATCTTCCTTAACCTTCATCATGATCTGCGCCGCCGCCAT
ATTATTGGCTATGAGTTTCTCCCGGACCGCCGTCGCTGGTGGGGACCACC
AATTGGGAATGGGATGGTTACCCTTAACGAAGGCAGTTTGCGAAGGCTCC
ATAGCGGAGTGCCTGGAAGATGACGAGTTTGAGCTTGATTCTGAGATCAA
CCGGCGCATCTTAGCCAATACCAAGTACATCAGCTATGGTGCGCTGCAGA
GGAACACTGTCCCATGCTCTCGTCGCGGTGCTTCCTACTACAATTGTCGA
CCAGGAGCTAAGGCTAACCCTTACAACCGTGGTTGCAGTGCCATTACGAG
GTGCAGGAGCTAA
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Coding sequence (CDS) from alignment at Ca4:5823201..5823563+

>Ca_03668_v1.0_kabuli ID=Ca_03668_v1.0_kabuli; Name=Ca_03668; organism=Cicer arietinum; type=CDS; length=363bp; location=Sequence derived from: Ca4:5823201..5823563+ (Cicer arietinum
ATGGCAAACTCATCTTCCTTAACCTTCATCATGATCTGCGCCGCCGCCAT
ATTATTGGCTATGAGTTTCTCCCGGACCGCCGTCGCTGGTGGGGACCACC
AATTGGGAATGGGATGGTTACCCTTAACGAAGGCAGTTTGCGAAGGCTCC
ATAGCGGAGTGCCTGGAAGATGACGAGTTTGAGCTTGATTCTGAGATCAA
CCGGCGCATCTTAGCCAATACCAAGTACATCAGCTATGGTGCGCTGCAGA
GGAACACTGTCCCATGCTCTCGTCGCGGTGCTTCCTACTACAATTGTCGA
CCAGGAGCTAAGGCTAACCCTTACAACCGTGGTTGCAGTGCCATTACGAG
GTGCAGGAGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR008801RALF