Ca_03744, Ca_03744_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_03744 vs. TrEMBL
Match: G7I6W8_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_1g081270 PE=4 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 2.858e-45 Identity = 94/134 (70.15%), Postives = 105/134 (78.36%), Query Frame = 1 Query: 1 MNIAVVNSATVTDFVDDATNFDSFVNEWFAMIDTNGDGNLSRDEIRDGFGMFMPLGAHSQPKQEMESVLELIFTRXXXXXXXXXXXXXXXSLMTEIMYAVARGIGGSPVIVALENGSLLMKAVQRESATQSYPS 402 MN+AVVNS TVTDFV+D TNFDSFV EWFAM+D NGDGNLSRDEIR GF FMPLG+HSQ ++E++ +LELIFTR SLMTEIM AVARGIGGSP+IV LE SLLMKAVQRE A+QSYPS Sbjct: 1 MNVAVVNSTTVTDFVNDTTNFDSFVKEWFAMLDANGDGNLSRDEIRGGFAWFMPLGSHSQSQEEIDRILELIFTRFDEDQNDSLDLNGFKSLMTEIMNAVARGIGGSPIIVVLEKDSLLMKAVQRELASQSYPS 134
BLAST of Ca_03744 vs. TrEMBL
Match: I3SL23_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 4.136e-36 Identity = 83/135 (61.48%), Postives = 98/135 (72.59%), Query Frame = 1 Query: 1 MNIAVV-NSATVTDFVDDATNFDSFVNEWFAMIDTNGDGNLSRDEIRDGFGMFMPLGAHSQPKQEMESVLELIFTRXXXXXXXXXXXXXXXSLMTEIMYAVARGIGGSPVIVALENGSLLMKAVQRESATQSYPS 402 M++AVV N +TVT F+DD FDSFVNE FAM+D NGDG LSRDE+R FG+FMPLG+ SQPKQE++ +L+LIF R SLMTEIM A+ARGIGG P++VALEN SLLMKAVQ E A S PS Sbjct: 1 MSVAVVLNGSTVTGFMDDKAKFDSFVNERFAMVDENGDGELSRDEVRVRFGLFMPLGSESQPKQEVDGMLDLIFKRFDEDQNGMLDLKEFKSLMTEIMNALARGIGGFPIMVALENDSLLMKAVQHELAAYSSPS 135
BLAST of Ca_03744 vs. TrEMBL
Match: I1NIT2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 9.868e-30 Identity = 74/131 (56.49%), Postives = 85/131 (64.89%), Query Frame = 1 Query: 1 MNIAVVNSATVTDFVDDATNFDSFVNEWFAMIDTNGDGNLSRDEIRDGFGMFMPLGAHSQPKQEMESVLELIFTRXXXXXXXXXXXXXXXSLMTEIMYAVARGIGGSPVIVALENGSLLMKAVQRESATQS 393 M++AVVNS T+T+FV+D FD FVNEWFA ID NGDG LSRD+IR GM +P G+ QP+QE E IF R +LMTEIM A AR IGGSPVIV L SLLMKAVQ E AT+S Sbjct: 1 MSVAVVNSFTITEFVNDKAKFDGFVNEWFARIDENGDGKLSRDKIRGRLGMLLPFGSELQPQQENEE----IFKRFDEDGNGALDLKEFKALMTEIMNAAARSIGGSPVIVLLGKDSLLMKAVQHELATRS 127
BLAST of Ca_03744 vs. TrEMBL
Match: I1LBJ9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 1.289e-29 Identity = 74/131 (56.49%), Postives = 84/131 (64.12%), Query Frame = 1 Query: 1 MNIAVVNSATVTDFVDDATNFDSFVNEWFAMIDTNGDGNLSRDEIRDGFGMFMPLGAHSQPKQEMESVLELIFTRXXXXXXXXXXXXXXXSLMTEIMYAVARGIGGSPVIVALENGSLLMKAVQRESATQS 393 M++AVVNS T+T+FV+D FD FVNEWFA ID NGDG LSRD+IR GM +P G+ S P+QE E IF R +LMTEIM A AR IGGSPVIV L SLLMKAVQ E AT S Sbjct: 1 MSVAVVNSFTITEFVNDKAKFDGFVNEWFARIDENGDGKLSRDKIRGRLGMLLPFGSESPPQQENEE----IFKRFDEDGNGALDLNEFKALMTEIMNAAARSIGGSPVIVVLGKDSLLMKAVQHELATPS 127
BLAST of Ca_03744 vs. TrEMBL
Match: B9RES5_RICCO (Calcium ion binding protein, putative OS=Ricinus communis GN=RCOM_1428190 PE=4 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.168e-22 Identity = 55/126 (43.65%), Postives = 79/126 (62.70%), Query Frame = 1 Query: 1 MNIAVVNSATVTDFVDDATNFDSFVNEWFAMIDTNGDGNLSRDEIRDGFGMFMPLGAHSQPKQEMESVLELIFTRXXXXXXXXXXXXXXXSLMTEIMYAVARGIGGSPVIVALENGSLLMKAVQRE 378 M +AV+N TV +FV+D+ F+ V E F M+D NGDG +S+DE+ DGF M L PKQE+ ++ + IF R SLM E+M+A+ARGIG SP+++AL+ S++MKAV+ E Sbjct: 1 MTLAVINGPTVVEFVEDSNTFEICVKECFGMLDVNGDGVISKDELCDGFYKLMSLECGLHPKQEINNLYDAIFERFDEDKNGSINKQQFRSLMRELMFAMARGIGNSPILMALDTESMMMKAVEHE 126
BLAST of Ca_03744 vs. TrEMBL
Match: M5W804_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016956mg PE=4 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 7.573e-22 Identity = 60/127 (47.24%), Postives = 79/127 (62.20%), Query Frame = 1 Query: 16 VNSATVTDFVDDATNFDSFVNEWFAMIDTNGDGNLSRDEIRDGFGMFMP-LGAHSQPKQEMESVLELIFTRXXXXXXXXXXXXXXXSLMTEIMYAVARGIGGSPVIVALENGSLLMKAVQRESATQS 393 +N+ TVT FV+DAT+F+ E F +D +G G LSR+++R GFG +P +G SQPK E+ + + IF R SL+ E M AVARGIGGSPV+VALE+GSLL KA + E A S Sbjct: 11 LNNLTVTRFVEDATSFEKCSKECFGALDADGKGGLSREKLRAGFGKLLPGIGYVSQPKDEINVLHDAIFKRFDADQNGVIDCHEFKSLLMETMLAVARGIGGSPVLVALEHGSLLRKAAEHEQARTS 137
BLAST of Ca_03744 vs. TrEMBL
Match: B9MZG7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_595457 PE=4 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 9.891e-22 Identity = 57/126 (45.24%), Postives = 78/126 (61.90%), Query Frame = 1 Query: 1 MNIAVVNSATVTDFVDDATNFDSFVNEWFAMIDTNGDGNLSRDEIRDGFGMFMPLGAHSQPKQEMESVLELIFTRXXXXXXXXXXXXXXXSLMTEIMYAVARGIGGSPVIVALENGSLLMKAVQRE 378 M++AVVN TVT FV+D F++ V E F M+D +GDG LSR E+R+GF M LG S K++++ + + IF R L+ E+M+A+ RG G SPV+VALE SLLMKAV+ E Sbjct: 1 MSLAVVNETTVTTFVEDMKAFENCVKECFEMLDVDGDGVLSRSELREGFCKLMSLGHESSKKEKIDHLFDTIFDRFDEDQNGSIDPREFKCLIRELMFAMGRGFGNSPVLVALEIDSLLMKAVEHE 126
BLAST of Ca_03744 vs. TrEMBL
Match: K4CZJ1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc10g044700.1 PE=4 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 9.580e-17 Identity = 50/128 (39.06%), Postives = 75/128 (58.59%), Query Frame = 1 Query: 1 MNIAVVNSATVTDFVDDATNFDSFVNEWFAMIDTNGDGNLSRDEIRDGFGMFMPLGAHSQPKQEMESVLELIFTRXXXXXXXXXXXXXXXSLMTEIMYAVARGIGGSPVIVALENGSLLMKAVQRESA 384 M++ VV+ + +FVDDA F + ++ F M+DT+G+G LSRDE+++ G F Q K+E+ S+ +++ R +L EIM A ARGIG SPV+V L+ SL+M+ VQR SA Sbjct: 1 MSVVVVDGPMMEEFVDDAEAFGKWTDKHFDMLDTDGNGELSRDELQNRKGKFSSSEFELQSKEEISSLYDILIERFDIDKSGTIDRQEFKALTKEIMLAKARGIGNSPVLVILQGDSLVMRVVQRFSA 128
BLAST of Ca_03744 vs. TrEMBL
Match: M1ABY4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400007481 PE=4 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.134e-16 Identity = 49/128 (38.28%), Postives = 74/128 (57.81%), Query Frame = 1 Query: 1 MNIAVVNSATVTDFVDDATNFDSFVNEWFAMIDTNGDGNLSRDEIRDGFGMFMPLGAHSQPKQEMESVLELIFTRXXXXXXXXXXXXXXXSLMTEIMYAVARGIGGSPVIVALENGSLLMKAVQRESA 384 M++ VV+ + +FVDD F + ++ F M+DT+G+G LSRDE+++ G F Q K+E+ S+ +++ R +L EIM A ARGIG SPV+V L+ SL+M+ VQR SA Sbjct: 1 MSVVVVDGPMMEEFVDDTEAFGKWTDKHFDMLDTDGNGELSRDELQNRKGKFSSCEFELQSKEEISSLYDILIERFDMDKSGTIDRQEFKALTKEIMLAKARGIGNSPVLVILQGDSLVMRVVQRFSA 128
BLAST of Ca_03744 vs. TrEMBL
Match: Q3ECP9_ARATH (Calcium-binding EF-hand-containing protein OS=Arabidopsis thaliana GN=AT1G54530 PE=4 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 3.189e-12 Identity = 43/123 (34.96%), Postives = 66/123 (53.66%), Query Frame = 1 Query: 13 VVNSATVTDFVDDATNFDSFVNEWFAMIDTNGDGNLSRDEIRDGFGMFMPLGAHSQPKQEMESVLELIFTRXXXXXXXXXXXXXXXSLMTEIMYAVARGIGGSPVIVALENGSLLMKAVQRES 381 V+ S T+ F+ D +F+S N++F ++D + +G LS E+R G + + + P E ++V IF R L+ EI+ A+ARGIG SPVI+ + N L+MKAV ES Sbjct: 5 VITSKTLIGFLSDTKSFESITNDYFQILDLDKNGMLSPSELRQGLNNVVAVESEVAPGDETDNVYNAIFER----FGEDLVPKNFRDLIAEILTAMARGIGNSPVIMVVHNDGLIMKAVLHES 123 The following BLAST results are available for this feature:
BLAST of Ca_03744 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_03744 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_03744_v1.0_kabuli ID=Ca_03744_v1.0_kabuli; Name=Ca_03744; organism=Cicer arietinum; type=mRNA; length=405bpback to top protein sequence of Ca_03744_v1.0_kabuli >Ca_03744_v1.0_kabuli ID=Ca_03744_v1.0_kabuli; Name=Ca_03744_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=134bpback to top mRNA from alignment at Ca4:5111878..5112282+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_03744_v1.0_kabuli ID=Ca_03744_v1.0_kabuli; Name=Ca_03744; organism=Cicer arietinum; type=mRNA; length=405bp; location=Sequence derived from: Ca4:5111878..5112282+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca4:5111878..5112282+ >Ca_03744_v1.0_kabuli ID=Ca_03744_v1.0_kabuli; Name=Ca_03744; organism=Cicer arietinum; type=CDS; length=405bp; location=Sequence derived from: Ca4:5111878..5112282+ (Cicer arietinumback to top |