Ca_03765, Ca_03765_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_03765 vs. SwissProt
Match: Y2416_ARATH (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana GN=At2g34160 PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 6.294e-40 Identity = 82/100 (82.00%), Postives = 91/100 (91.00%), Query Frame = 1 Query: 58 DSHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAIATVVTIAEILKNNGFATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDNLMA 357 DS KKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAIATVVT+ EILKNNGFA EKK++TSTV +KD+ +GR VQKAKIEI L KSEKFD LMA Sbjct: 16 DSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMA 115
BLAST of Ca_03765 vs. TrEMBL
Match: I1LBN1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 1.557e-51 Identity = 107/118 (90.68%), Postives = 112/118 (94.92%), Query Frame = 1 Query: 55 NDSHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAIATVVTIAEILKNNGFATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDNLMAPPA-TKTESEATTDDNK 405 NDSHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAIATVVTIAEILKNNG ATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKS+KFDNLM+PPA T++E A DD+K Sbjct: 13 NDSHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAIATVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSDKFDNLMSPPAPTESEEAAADDDDK 130
BLAST of Ca_03765 vs. TrEMBL
Match: I3SVY5_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 2.486e-49 Identity = 106/117 (90.60%), Postives = 110/117 (94.02%), Query Frame = 1 Query: 55 NDSHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAIATVVTIAEILKNNGFATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDNLMAPPATKTESEATTDDNK 405 N+S KKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAIATVVTIAEILKNNG ATEK+VLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDNLMA PATKTESE ++K Sbjct: 12 NESPKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAIATVVTIAEILKNNGLATEKRVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDNLMA-PATKTESEEPAVNDK 127
BLAST of Ca_03765 vs. TrEMBL
Match: I1NIR8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 3.247e-49 Identity = 103/117 (88.03%), Postives = 111/117 (94.87%), Query Frame = 1 Query: 55 NDSHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAIATVVTIAEILKNNGFATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDNLMAPPA-TKTESEATTDDN 402 NDSHKK RIQVSNTKKPLFFYVNLAKRYIQQH+EVELSALGMAIATVVTI+EILKNNG ATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKS+KFDNLM+PPA T++E+ A DD+ Sbjct: 13 NDSHKKYRIQVSNTKKPLFFYVNLAKRYIQQHDEVELSALGMAIATVVTISEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSDKFDNLMSPPAPTESEAAAADDDH 129
BLAST of Ca_03765 vs. TrEMBL
Match: B9S7H5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0607550 PE=4 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 1.277e-45 Identity = 98/114 (85.96%), Postives = 100/114 (87.72%), Query Frame = 1 Query: 43 NGNGNDSHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAIATVVTIAEILKNNGFATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDNLMAPPATKTESE 384 N KKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAI TVVTIAEILKNNG ATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFD+LM T TE+E Sbjct: 35 NNAAQTQQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMEAANTATEAE 148
BLAST of Ca_03765 vs. TrEMBL
Match: D7L2W2_ARALL (Nucleic acid binding protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_477722 PE=4 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 9.152e-44 Identity = 95/116 (81.90%), Postives = 104/116 (89.66%), Query Frame = 1 Query: 58 DSHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAIATVVTIAEILKNNGFATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDNLMAPPATK---TESEATTD 396 ++HKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAI TVVTI+EILKNNG ATEKKVLTSTVGMKDE KGR+VQKAKIEIVLGKS+KFD+L+ PP T E EA+ + Sbjct: 33 ETHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTISEILKNNGLATEKKVLTSTVGMKDETKGRMVQKAKIEIVLGKSDKFDSLV-PPVTNGKTPEEEASAE 147
BLAST of Ca_03765 vs. TrEMBL
Match: R0I6K8_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10015288mg PE=4 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.195e-43 Identity = 95/111 (85.59%), Postives = 102/111 (91.89%), Query Frame = 1 Query: 58 DSHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAIATVVTIAEILKNNGFATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDNLMAPPAT--KTESE 384 ++HKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAI TVVTI+EILKNNG ATEKKVLTSTVGMKDE KGR+VQKAKIEIVLGKS+KFD+L+ PP T KT E Sbjct: 31 ETHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTISEILKNNGLATEKKVLTSTVGMKDETKGRMVQKAKIEIVLGKSDKFDSLV-PPVTNGKTPEE 140
BLAST of Ca_03765 vs. TrEMBL
Match: Q9SR12_ARATH (Alba DNA/RNA-binding protein OS=Arabidopsis thaliana GN=F7O18.10 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 2.039e-43 Identity = 94/116 (81.03%), Postives = 104/116 (89.66%), Query Frame = 1 Query: 58 DSHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAIATVVTIAEILKNNGFATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDNLMAPPATK---TESEATTD 396 ++HKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAI TVVTI+EILKNNG ATEKKVLTSTVGMKDE KG++VQKAKIEIVLGKS+KFD+L+ PP T E EA+ + Sbjct: 33 ETHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTISEILKNNGLATEKKVLTSTVGMKDETKGKMVQKAKIEIVLGKSDKFDSLV-PPVTNGKTPEEEASAE 147
BLAST of Ca_03765 vs. TrEMBL
Match: K4B093_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc01g097050.2 PE=4 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 1.012e-42 Identity = 91/118 (77.12%), Postives = 97/118 (82.20%), Query Frame = 1 Query: 43 NGNGNDSHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAIATVVTIAEILKNNGFATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDNLMAPPATKTESEATTD 396 N N K NRIQVSNTKKPLFFYVNLAKRY+QQHNEVELSALGMAI TVVT+AEILKN GFATEKKVLTSTVGMKDE KGR+VQKA+IEIVL KSEKFD LM P T ++ D Sbjct: 29 NNNNEAQKKSNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAITTVVTVAEILKNGGFATEKKVLTSTVGMKDEAKGRMVQKARIEIVLTKSEKFDKLMTPSNTNSDHAVAQD 146
BLAST of Ca_03765 vs. TrEMBL
Match: M5W0R6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013191mg PE=4 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.322e-42 Identity = 94/116 (81.03%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 58 DSHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAIATVVTIAEILKNNGFATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDNLMAPPATKTESEATTDDNK 405 D+ KKNRIQVSNTKKPLFFYVNLAKRYI+QHNEVELSALGMAI TVVTIAEILKNNG A EKKV TSTVGMKDENKGRLVQKAKIEIVLGKSEKFD +M A EA + K Sbjct: 20 DAAKKNRIQVSNTKKPLFFYVNLAKRYIEQHNEVELSALGMAITTVVTIAEILKNNGLAIEKKVSTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDAIMKMNAAILAPEAVAEAKK 135
BLAST of Ca_03765 vs. TrEMBL
Match: M1CMK4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400027494 PE=4 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.726e-42 Identity = 92/119 (77.31%), Postives = 100/119 (84.03%), Query Frame = 1 Query: 43 NGNGNDSHKK-NRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAIATVVTIAEILKNNGFATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDNLMAPPATKTESEATTD 396 N N N++ KK NRIQVSNTKKPLFFYVNLAKRY+QQH EVELSALGMAI TVVT+AEILKN GFATEKKVLTSTVGMKDE KGR+VQKA+IEIVL KSEKFD LM P T ++ D Sbjct: 25 NNNNNEAQKKSNRIQVSNTKKPLFFYVNLAKRYMQQHTEVELSALGMAITTVVTVAEILKNGGFATEKKVLTSTVGMKDEAKGRMVQKARIEIVLTKSEKFDKLMTPNNTNSDRAVAQD 143
BLAST of Ca_03765 vs. DB:Swiss
Match: Y2416_ARATH (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 PE=1 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 9.110e-55 Identity = 82/102 (80.39%), Postives = 91/102 (89.22%), Query Frame = 1 Query: 52 GNDSHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAIATVVTIAEILKNNGFATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDNLMA 357 DS KKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAIATVVT+ EILKNNGFA EKK++TSTV +KD+ +GR VQKAKIEI L KSEKFD LMA Sbjct: 14 ATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMA 115 The following BLAST results are available for this feature:
BLAST of Ca_03765 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot) Total hits: 1
BLAST of Ca_03765 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_03765 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 1
Expression
Available Analyses Select an Expression Analysis Select a property to group and sort biological samples Select a property to color biological samples Hover the mouse over a column in the graph to view more information about that biological sample. You can click and drag to rearrange groups along the x-axis. You can also click and drag to move the legend. InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_03765_v1.0_kabuli ID=Ca_03765_v1.0_kabuli; Name=Ca_03765; organism=Cicer arietinum; type=mRNA; length=408bpback to top protein sequence of Ca_03765_v1.0_kabuli >Ca_03765_v1.0_kabuli ID=Ca_03765_v1.0_kabuli; Name=Ca_03765_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=135bpback to top mRNA from alignment at Ca4:4930384..4931634- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_03765_v1.0_kabuli ID=Ca_03765_v1.0_kabuli; Name=Ca_03765; organism=Cicer arietinum; type=mRNA; length=1251bp; location=Sequence derived from: Ca4:4930384..4931634- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca4:4930384..4931634- >Ca_03765_v1.0_kabuli ID=Ca_03765_v1.0_kabuli; Name=Ca_03765; organism=Cicer arietinum; type=CDS; length=408bp; location=Sequence derived from: Ca4:4930384..4931634- (Cicer arietinumback to top |