Ca_11325, Ca_11325_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_11325 vs. SwissProt
Match: YUID_BACSU (Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) GN=yuiD PE=4 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.731e-16 Identity = 43/96 (44.79%), Postives = 58/96 (60.42%), Query Frame = 1 Query: 34 MFSNFPLISAIVAFAIAQSIKFLTVWYKEKRWDPKQLVGSGGMPSSHSSTVTALATAVGFHDGFGGPTFAIALILACIVMYDATGVRLQAGRQAEV 321 + +NFPL+S++ A AQ IK + ++ D + +GGMPSSHS+ VTAL+T V G FA++ I A I M+DATGVR AG QA V Sbjct: 3 LLTNFPLLSSLAAIIFAQVIKVPIQFIVSRKLDWSLVTSTGGMPSSHSAAVTALSTGVALEHGLDSSLFAVSAIFAVITMFDATGVRRHAGEQATV 98
BLAST of Ca_11325 vs. TrEMBL
Match: I1MYI0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.595e-43 Identity = 88/107 (82.24%), Postives = 95/107 (88.79%), Query Frame = 1 Query: 1 MHNISDTPSSSMFSNFPLISAIVAFAIAQSIKFLTVWYKEKRWDPKQLVGSGGMPSSHSSTVTALATAVGFHDGFGGPTFAIALILACIVMYDATGVRLQAGRQAEV 321 M + T SSSM N+PLISAIVAFAIAQ IKF TVWYKEKRWDPKQLVGSGGMPSSHS+TVTALA A+GFH+GFGGP FA AL+LACIVMYDATGVRLQAGRQAE+ Sbjct: 1 MSEAAATTSSSMMRNYPLISAIVAFAIAQFIKFFTVWYKEKRWDPKQLVGSGGMPSSHSATVTALAAAIGFHEGFGGPLFATALVLACIVMYDATGVRLQAGRQAEL 107
BLAST of Ca_11325 vs. TrEMBL
Match: G7JC22_MEDTR (Acid phosphatase/vanadium-dependent haloperoxidase-like protein OS=Medicago truncatula GN=MTR_3g085670 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.350e-42 Identity = 86/99 (86.87%), Postives = 93/99 (93.94%), Query Frame = 1 Query: 25 SSSMFSNFPLISAIVAFAIAQSIKFLTVWYKEKRWDPKQLVGSGGMPSSHSSTVTALATAVGFHDGFGGPTFAIALILACIVMYDATGVRLQAGRQAEV 321 SSS+F N+PLISAI+AF IAQSIKF TVWYKEKRWDPKQLVGSGGMPSSHS+TVTALATAVGFH+GFGGP FA AL++A IVMYDATGVRLQAGRQAEV Sbjct: 11 SSSIFHNYPLISAILAFTIAQSIKFFTVWYKEKRWDPKQLVGSGGMPSSHSATVTALATAVGFHEGFGGPLFATALVMAIIVMYDATGVRLQAGRQAEV 109
BLAST of Ca_11325 vs. TrEMBL
Match: I1LNA8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 2.303e-42 Identity = 85/101 (84.16%), Postives = 92/101 (91.09%), Query Frame = 1 Query: 19 TPSSSMFSNFPLISAIVAFAIAQSIKFLTVWYKEKRWDPKQLVGSGGMPSSHSSTVTALATAVGFHDGFGGPTFAIALILACIVMYDATGVRLQAGRQAEV 321 T SSSM N+PLISAIVAFAIAQ IKF T W+KEKRWDPKQLVGSGGMPSSHS+TVTALA A+GFH+GFGGP FA AL+LACIVMYDATGVRLQAGRQAE+ Sbjct: 8 TTSSSMMRNYPLISAIVAFAIAQFIKFFTAWFKEKRWDPKQLVGSGGMPSSHSATVTALAAAIGFHEGFGGPLFATALVLACIVMYDATGVRLQAGRQAEL 108
BLAST of Ca_11325 vs. TrEMBL
Match: M5XZR0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012552mg PE=4 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 6.271e-40 Identity = 81/103 (78.64%), Postives = 92/103 (89.32%), Query Frame = 1 Query: 13 SDTPSSSMFSNFPLISAIVAFAIAQSIKFLTVWYKEKRWDPKQLVGSGGMPSSHSSTVTALATAVGFHDGFGGPTFAIALILACIVMYDATGVRLQAGRQAEV 321 S T SSS+F+N+PL+SA+VAFAIAQ IKF T WYKE+RWD KQLVGSGGMPSSHS+TVTA+A A+GF +G GGP FAI LILAC+VMYDATGVRLQAGRQAEV Sbjct: 7 SSTSSSSIFTNYPLLSAVVAFAIAQFIKFFTSWYKERRWDFKQLVGSGGMPSSHSATVTAVAAAIGFQEGVGGPIFAIGLILACVVMYDATGVRLQAGRQAEV 109
BLAST of Ca_11325 vs. TrEMBL
Match: I1KRZ5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 3.441e-38 Identity = 78/98 (79.59%), Postives = 88/98 (89.80%), Query Frame = 1 Query: 28 SSMFSNFPLISAIVAFAIAQSIKFLTVWYKEKRWDPKQLVGSGGMPSSHSSTVTALATAVGFHDGFGGPTFAIALILACIVMYDATGVRLQAGRQAEV 321 SS+ SN+PLISAIVAFA+AQSIKF T W+K++RWD KQLVGSGGMPSSHS+TVTALA A+G +GFGGP FA AL+ ACIVMYDATGVRLQAGRQAEV Sbjct: 6 SSITSNYPLISAIVAFALAQSIKFFTTWFKDRRWDLKQLVGSGGMPSSHSATVTALAAAIGLQEGFGGPLFATALVFACIVMYDATGVRLQAGRQAEV 103
BLAST of Ca_11325 vs. TrEMBL
Match: K4BYI9_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc05g014700.2 PE=4 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 4.494e-38 Identity = 80/104 (76.92%), Postives = 89/104 (85.58%), Query Frame = 1 Query: 10 ISDTPSSSMFSNFPLISAIVAFAIAQSIKFLTVWYKEKRWDPKQLVGSGGMPSSHSSTVTALATAVGFHDGFGGPTFAIALILACIVMYDATGVRLQAGRQAEV 321 I+ SSS SN PL+SAI+AFA+AQSIKF T WY+EK WD KQLVGSGGMPSSHSSTVTALATAVG +GFGG FAI+L+LAC+VMYDATGVRL AGRQAEV Sbjct: 23 IASYGSSSFLSNCPLLSAIIAFALAQSIKFFTSWYREKHWDLKQLVGSGGMPSSHSSTVTALATAVGLQEGFGGSLFAISLVLACVVMYDATGVRLHAGRQAEV 126
BLAST of Ca_11325 vs. TrEMBL
Match: I3S4M5_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.001e-37 Identity = 78/103 (75.73%), Postives = 88/103 (85.44%), Query Frame = 1 Query: 13 SDTPSSSMFSNFPLISAIVAFAIAQSIKFLTVWYKEKRWDPKQLVGSGGMPSSHSSTVTALATAVGFHDGFGGPTFAIALILACIVMYDATGVRLQAGRQAEV 321 S T S + N+PLISA+VAFA+AQ IKF T W+KE+RWD KQLV SGGMPSSHS+ VTALA A+GF +GFGGP FAIAL+LACIVMYDATGVRLQAGRQAEV Sbjct: 14 SSTSFSLISVNYPLISALVAFALAQGIKFFTTWFKERRWDMKQLVASGGMPSSHSAVVTALAAAIGFQEGFGGPLFAIALVLACIVMYDATGVRLQAGRQAEV 116
BLAST of Ca_11325 vs. TrEMBL
Match: B9RMM2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1081740 PE=4 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.001e-37 Identity = 77/106 (72.64%), Postives = 92/106 (86.79%), Query Frame = 1 Query: 4 HNISDTPSSSMFSNFPLISAIVAFAIAQSIKFLTVWYKEKRWDPKQLVGSGGMPSSHSSTVTALATAVGFHDGFGGPTFAIALILACIVMYDATGVRLQAGRQAEV 321 +++S + SS+++N+PL+SA+VAFAIAQS K T WYKE+RWD KQLVGSGGMPSSHS+TVTALA A+G +GFGG FA ALILAC+VMYDATGVRLQAGRQAEV Sbjct: 17 NSVSSSSGSSIYTNYPLLSALVAFAIAQSTKVFTSWYKERRWDFKQLVGSGGMPSSHSATVTALAIAIGLQEGFGGSLFAAALILACVVMYDATGVRLQAGRQAEV 122
BLAST of Ca_11325 vs. TrEMBL
Match: B9HTA9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_804871 PE=4 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.001e-37 Identity = 79/99 (79.80%), Postives = 87/99 (87.88%), Query Frame = 1 Query: 25 SSSMFSNFPLISAIVAFAIAQSIKFLTVWYKEKRWDPKQLVGSGGMPSSHSSTVTALATAVGFHDGFGGPTFAIALILACIVMYDATGVRLQAGRQAEV 321 S S +N+PLISA +AFAIAQSIKF T WYKE+RWD KQLVGSGGMPSSHS+TV ALA AVGF +GFGG F+IALILAC+VMYDATGVRLQAGRQAEV Sbjct: 20 SESRLTNYPLISAFLAFAIAQSIKFFTSWYKERRWDLKQLVGSGGMPSSHSATVAALAMAVGFQEGFGGSLFSIALILACVVMYDATGVRLQAGRQAEV 118
BLAST of Ca_11325 vs. TrEMBL
Match: K4BQN5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc04g024340.2 PE=4 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.308e-37 Identity = 77/99 (77.78%), Postives = 87/99 (87.88%), Query Frame = 1 Query: 25 SSSMFSNFPLISAIVAFAIAQSIKFLTVWYKEKRWDPKQLVGSGGMPSSHSSTVTALATAVGFHDGFGGPTFAIALILACIVMYDATGVRLQAGRQAEV 321 SSS F+N+PL+SA++AFA+AQSIK T WYKE+RWD KQLVGSGGMPSSHSSTVTALA AVG +GFGG FA AL+LAC+VMYDATGVRL AGRQAEV Sbjct: 14 SSSFFTNYPLMSALIAFALAQSIKLFTSWYKERRWDLKQLVGSGGMPSSHSSTVTALAVAVGLQEGFGGALFACALVLACVVMYDATGVRLHAGRQAEV 112
BLAST of Ca_11325 vs. DB:Swiss
Match: YUID_BACSU (Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) OX=224308 GN=yuiD PE=4 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.095e-20 Identity = 43/97 (44.33%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 31 SMFSNFPLISAIVAFAIAQSIKFLTVWYKEKRWDPKQLVGSGGMPSSHSSTVTALATAVGFHDGFGGPTFAIALILACIVMYDATGVRLQAGRQAEV 321 + +NFPL+S++ A AQ IK + ++ D + +GGMPSSHS+ VTAL+T V G FA++ I A I M+DATGVR AG QA V Sbjct: 2 ELLTNFPLLSSLAAIIFAQVIKVPIQFIVSRKLDWSLVTSTGGMPSSHSAAVTALSTGVALEHGLDSSLFAVSAIFAVITMFDATGVRRHAGEQATV 98 The following BLAST results are available for this feature:
BLAST of Ca_11325 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot) Total hits: 1
BLAST of Ca_11325 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_11325 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_11325_v1.0_kabuli ID=Ca_11325_v1.0_kabuli; Name=Ca_11325; organism=Cicer arietinum; type=mRNA; length=324bpback to top protein sequence of Ca_11325_v1.0_kabuli >Ca_11325_v1.0_kabuli ID=Ca_11325_v1.0_kabuli; Name=Ca_11325_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=107bpback to top mRNA from alignment at Ca5:42843059..42844206- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_11325_v1.0_kabuli ID=Ca_11325_v1.0_kabuli; Name=Ca_11325; organism=Cicer arietinum; type=mRNA; length=1148bp; location=Sequence derived from: Ca5:42843059..42844206- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:42843059..42844206- >Ca_11325_v1.0_kabuli ID=Ca_11325_v1.0_kabuli; Name=Ca_11325; organism=Cicer arietinum; type=CDS; length=324bp; location=Sequence derived from: Ca5:42843059..42844206- (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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