Ca_17123, Ca_17123_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_17123
Unique NameCa_17123_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length1269
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca4chromosomeCa4:19866882..19870050 +Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR260Pisum sativum Cameor genome v1aPisum sativum
capsR287Pisum sativum Cameor genome v1aPisum sativum
capsR315Pisum sativum Cameor genome v1aPisum sativum
capsR349Pisum sativum Cameor genome v1aPisum sativum
cavuR251Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR296Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR306Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR300Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR358Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR390Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0505Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0089Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0161Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0282Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0595Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0745Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0901Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0903Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0953Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1132Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1204Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL122Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL395Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL404Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL420Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL493Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL639Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR255Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR270Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR281Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR309Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR276Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR274Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
catifR311Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR341Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR355Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR313Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR343Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR359Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR286Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR300Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR313Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR361Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR396Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR236Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR278Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR287Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR117Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR119Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR131Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL074Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL364Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL394Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL468Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL636Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR264Cicer arietinum
cacarR271Cicer arietinum
cacarR286Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-TanjilR_30211Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Hedin2.R1.3g050160.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_022779209.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg1467.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Phvul.005G136500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Va02G022480.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Phvul.007G221500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Hedin2.R1.1g042200.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigun05g250100.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Va03G072860.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Psat06G0191900-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
evm.model.Chr07.2201.1.6211317bVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.3g041880.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat05G0767600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Va05G050190.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-KK1_010096Cajanus cajan Asha genome v1.0Cajanus cajan
LR48_mrnaVigan02g087000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
jg43671.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.1g028960.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun07g069300.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
LR48_mrnaVigan03g236500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_014642636.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr05.2356Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
LR48_mrnaVigan05g181100Vigna angularis Jingnong 6 genome v1.1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004487075.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_012713942.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_004497434.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_17123-CDS1Ca_17123-CDS1Cicer arietinumCDS
Ca_17123-CDS2Ca_17123-CDS2Cicer arietinumCDS
Ca_17123-CDS3Ca_17123-CDS3Cicer arietinumCDS
Ca_17123-CDS4Ca_17123-CDS4Cicer arietinumCDS
Ca_17123-CDS5Ca_17123-CDS5Cicer arietinumCDS
Ca_17123-CDS6Ca_17123-CDS6Cicer arietinumCDS
Ca_17123-CDS7Ca_17123-CDS7Cicer arietinumCDS
Ca_17123-CDS8Ca_17123-CDS8Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_17123_v1.0_kabuliCa_17123_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_17123 vs. SwissProt
Match: SYP71_ARATH (Syntaxin-71 OS=Arabidopsis thaliana GN=SYP71 PE=1 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 1.034e-92
Identity = 169/237 (71.31%), Postives = 206/237 (86.92%), Query Frame = 1 
Query:    1 MSVIDILTRVDSICKKYDKYDLEKNKDANVSGDDAFVRLYASVDSDIDSLLQKAETASKDRGKASAVAINAEIRRTKARLLEEVPKLQRLAIKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWAASA--SRAEIKFDSDGRFDDEYFQSTEQSSQFRQEYEMRRIRQ-ASLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDSKVDKASSDLKNTNVRLKHTVNQ 702
            M+VIDILTRVDSICKKYDKYD++K ++AN+SGDDAF RLY + ++ I++ L+KAE  +K++ +A+AVA+NAEIRRTKARL EEVPKLQRLA+K+VKGL+++E AARNDLVLALP RI+AIPDGT   PK T  W  S+  SR +IKFDSDGRFDD+YFQ + +SSQFRQEYEMR+I+Q   LD+I+EGLD LK+MA DMNEELDRQVPLMDEID+KVD+A+SDLKNTNVRLK TVNQ
Sbjct:    1 MTVIDILTRVDSICKKYDKYDVDKQREANISGDDAFARLYGAFETQIETALEKAELVTKEKNRAAAVAMNAEIRRTKARLSEEVPKLQRLAVKRVKGLTTEELAARNDLVLALPARIEAIPDGTAGGPKSTSAWTPSSTTSRPDIKFDSDGRFDDDYFQESNESSQFRQEYEMRKIKQEQGLDMISEGLDALKNMASDMNEELDRQVPLMDEIDTKVDRATSDLKNTNVRLKDTVNQ 237
[Close]
BLAST of Ca_17123 vs. SwissProt
Match: SYP73_ARATH (Syntaxin-73 OS=Arabidopsis thaliana GN=SYP73 PE=2 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 2.642e-80
Identity = 154/237 (64.98%), Postives = 193/237 (81.43%), Query Frame = 1 
Query:    1 MSVIDILTRVDSICKKYDKYDLEKNKDANVSGDDAFVRLYASVDSDIDSLLQKAETASKDRGKASAVAINAEIRRTKARLLEEVPKLQRLAIKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWAASASRAEIKFD---SDGRFDDEYFQSTEQSSQFRQEYEMRRIRQASLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDSKVDKASSDLKNTNVRLKHTVNQ 702
            M VID++TRVDSICKKY+KYD+ + +DANVSGDDAF RLY++V+  ++++LQK E  S +  KA AVA+NAEIRRTKARLLE +PKLQRL++KKVKGLS +E  ARNDLVL+L ++I+AIP+   +AP   GGW AS S + I+FD   SD R   EYFQ T +S QF+QEYEM+RI+QA LD IAEGLDTLK+MA D+NEELDRQ PLMDEID+K+DKA++DLK+TNVRLK TV +
Sbjct:    1 MGVIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSETNKAKAVAMNAEIRRTKARLLEGIPKLQRLSLKKVKGLSKEELDARNDLVLSLRDKIEAIPES--SAP-VVGGWEASTSYSNIRFDTNVSDDRIGSEYFQPTGESDQFKQEYEMKRIKQARLDYIAEGLDTLKNMAQDINEELDRQEPLMDEIDTKIDKAATDLKSTNVRLKDTVTK 234
[Close]
BLAST of Ca_17123 vs. SwissProt
Match: SYP72_ARATH (Syntaxin-72 OS=Arabidopsis thaliana GN=SYP72 PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 6.304e-74
Identity = 145/238 (60.92%), Postives = 189/238 (79.41%), Query Frame = 1 
Query:    1 MSVIDILTRVDSICKKYDKYDLEKNKDANVSGDDAFVRLYASVDSDIDSLLQKAETASKDRGKASAVAINAEIRRTKARLLEEVPKLQRLAIKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGG-W-AASASRAEIKFD-SDGRFDDEYFQSTEQSSQFRQEYEMRRIRQ-ASLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDSKVDKASSDLKNTNVRLKHTVNQ 702
            M VIDI+ RVD ICKKYDKYD++K+++   SGDDAF RL+ S+DSDI+++L+KAE AS ++ +A+AVA+NAE+RRTKARL E+V KLQ+LA+KK+KGL+ +E  +R DLV+AL +R+QAIPDG     KQ    W  ASA    IKFD S+   DD +FQ +E+SSQFRQEYEMRR +Q   LD+I+EGLD LK++A DMNEELD+QVPLM+E+++KVD A+SDLKNTNVRLK  + Q
Sbjct:    1 MPVIDIIFRVDEICKKYDKYDIDKHREIGASGDDAFSRLFTSIDSDIEAVLRKAELASTEKNRAAAVAMNAEVRRTKARLAEDVVKLQKLAVKKIKGLTREERESRCDLVIALADRLQAIPDGNEHGAKQANSDWGGASAPNKNIKFDMSEEDMDDGFFQQSEESSQFRQEYEMRRKKQDEGLDIISEGLDALKNLARDMNEELDKQVPLMEEMETKVDGATSDLKNTNVRLKKQLVQ 238
[Close]
BLAST of Ca_17123 vs. TrEMBL
Match: G7IBL3_MEDTR (Syntaxin-71 OS=Medicago truncatula GN=MTR_1g066460 PE=4 SV=1)

HSP 1 Score: 412.149 bits (1058), Expect = 1.900e-112
Identity = 211/235 (89.79%), Postives = 224/235 (95.32%), Query Frame = 1 
Query:    1 MSVIDILTRVDSICKKYDKYDLEKNKDANVSGDDAFVRLYASVDSDIDSLLQKAETASKDRGKASAVAINAEIRRTKARLLEEVPKLQRLAIKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWAASASRAEIKFDSDGRFDDEYFQSTEQSSQFRQEYEMRRIRQ-ASLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDSKVDKASSDLKNTNVRLKHTVNQ 702
            MSVID+LTRVDSICKKYDKYDL+K  +ANVSGDDAFVRLYASVDSDI++LLQKAE AS +RGKASAVAINAEIRRTKARLLEEVPKLQRLA+KKVKGL SQEFAARNDLVLALPERIQAIPDGTP APKQTGGWA+SASR EIKFDSDGRFDDEYFQSTEQS+QF+QEYEMRRI+Q   LD+IAEGLDTLKDMAHDMNEELDRQVPLMDEID+KVDKASSDLKNTNVRLK TVNQ
Sbjct:    1 MSVIDLLTRVDSICKKYDKYDLDKQNNANVSGDDAFVRLYASVDSDIEALLQKAEKASNERGKASAVAINAEIRRTKARLLEEVPKLQRLALKKVKGLESQEFAARNDLVLALPERIQAIPDGTPVAPKQTGGWASSASRPEIKFDSDGRFDDEYFQSTEQSNQFKQEYEMRRIKQDQGLDMIAEGLDTLKDMAHDMNEELDRQVPLMDEIDAKVDKASSDLKNTNVRLKDTVNQ 235
[Close]
BLAST of Ca_17123 vs. TrEMBL
Match: I1LZ35_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 408.297 bits (1048), Expect = 2.743e-111
Identity = 209/235 (88.94%), Postives = 224/235 (95.32%), Query Frame = 1 
Query:    1 MSVIDILTRVDSICKKYDKYDLEKNKDANVSGDDAFVRLYASVDSDIDSLLQKAETASKDRGKASAVAINAEIRRTKARLLEEVPKLQRLAIKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWAASASRAEIKFDSDGRFDDEYFQSTEQSSQFRQEYEMRRIRQ-ASLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDSKVDKASSDLKNTNVRLKHTVNQ 702
            MSVIDILTRVDSICKKYDKYD+EK++DANVSGDDAF RLYASVD+DI +LLQKAE+ASK++GKASAVAINAEIRRTKARLLEEVPKLQRLA+KKVKGLSSQEFAARNDLVLALP+RIQAIPDG P  PKQTGGWAASASR EIKFDSDGRFDDEYFQ +EQSSQFRQEYEMRR++Q   LDVIAEGLDTLK+MAHDMNEELDRQVPLMDEID+KVDKASSDLKNTNVRLK TVNQ
Sbjct:    1 MSVIDILTRVDSICKKYDKYDVEKHRDANVSGDDAFARLYASVDADIVALLQKAESASKEKGKASAVAINAEIRRTKARLLEEVPKLQRLAVKKVKGLSSQEFAARNDLVLALPDRIQAIPDGAPPVPKQTGGWAASASRPEIKFDSDGRFDDEYFQQSEQSSQFRQEYEMRRMKQDQGLDVIAEGLDTLKNMAHDMNEELDRQVPLMDEIDTKVDKASSDLKNTNVRLKDTVNQ 235
[Close]
BLAST of Ca_17123 vs. TrEMBL
Match: I1L8U0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 407.912 bits (1047), Expect = 3.583e-111
Identity = 207/235 (88.09%), Postives = 225/235 (95.74%), Query Frame = 1 
Query:    1 MSVIDILTRVDSICKKYDKYDLEKNKDANVSGDDAFVRLYASVDSDIDSLLQKAETASKDRGKASAVAINAEIRRTKARLLEEVPKLQRLAIKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWAASASRAEIKFDSDGRFDDEYFQSTEQSSQFRQEYEMRRIRQ-ASLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDSKVDKASSDLKNTNVRLKHTVNQ 702
            MSVIDILTRVDSICKKYDKYD++K++DANVSGDDAF RLYASVD+DI++LLQKAE+ASK++GKASAVAINAEIRRTKARLLEEVPKLQRLA+KKVKGLSSQEFAARNDLVLALP+RIQAIPDG P  PKQTGGWAASASR EIKFDSDGRFDDEYFQ +EQS+QFRQEYEMRR++Q   LDVIAEGLDTLK+MAHDMNEELDRQVPLMDEID+KVDKASSDLKNTNVRLK TVNQ
Sbjct:    1 MSVIDILTRVDSICKKYDKYDVDKHRDANVSGDDAFARLYASVDADIEALLQKAESASKEKGKASAVAINAEIRRTKARLLEEVPKLQRLAVKKVKGLSSQEFAARNDLVLALPDRIQAIPDGAPPVPKQTGGWAASASRPEIKFDSDGRFDDEYFQQSEQSNQFRQEYEMRRMKQDQGLDVIAEGLDTLKNMAHDMNEELDRQVPLMDEIDTKVDKASSDLKNTNVRLKDTVNQ 235
[Close]
BLAST of Ca_17123 vs. TrEMBL
Match: I1NA78_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 397.512 bits (1020), Expect = 4.842e-108
Identity = 198/234 (84.62%), Postives = 221/234 (94.44%), Query Frame = 1 
Query:    1 MSVIDILTRVDSICKKYDKYDLEKNKDANVSGDDAFVRLYASVDSDIDSLLQKAETASKDRGKASAVAINAEIRRTKARLLEEVPKLQRLAIKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWAASASRAEIKFDSDGRFDDEYFQSTEQSSQFRQEYEMRRIRQASLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDSKVDKASSDLKNTNVRLKHTVNQ 702
            MSVIDILTRVDSICKKYDKYD+EK +D+N+S DDAF +LYASVD+DI++LLQKAETA K++ KAS VAINAEIRRTKARLLEEVPKLQRLA+KKVKGLSSQEFAARNDL LALP+RIQAIPDG PAAPKQTG WAASASR  IKFDSDG+FDDEYFQ TE+SS+FRQEYEMR+++QASLD+IAEGLDTLK+MAHDMNEELDRQVPLMDEID+KVD+ASSDLKNTNVRL+ TVNQ
Sbjct:    1 MSVIDILTRVDSICKKYDKYDVEKQRDSNLSADDAFAKLYASVDADIEALLQKAETADKEKSKASTVAINAEIRRTKARLLEEVPKLQRLAMKKVKGLSSQEFAARNDLALALPDRIQAIPDGAPAAPKQTGSWAASASRPGIKFDSDGKFDDEYFQQTEESSRFRQEYEMRKMKQASLDMIAEGLDTLKNMAHDMNEELDRQVPLMDEIDTKVDRASSDLKNTNVRLRDTVNQ 234
[Close]
BLAST of Ca_17123 vs. TrEMBL
Match: K0J6E7_LOTJA (SNARE protein OS=Lotus japonicus GN=LjSYP71 PE=2 SV=1)

HSP 1 Score: 394.43 bits (1012), Expect = 4.099e-107
Identity = 198/235 (84.26%), Postives = 223/235 (94.89%), Query Frame = 1 
Query:    1 MSVIDILTRVDSICKKYDKYDLEKNKDANVSGDDAFVRLYASVDSDIDSLLQKAETASKDRGKASAVAINAEIRRTKARLLEEVPKLQRLAIKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWAASASRAEIKFDSDGRFDDEYFQSTEQSSQFRQEYEMRRIRQ-ASLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDSKVDKASSDLKNTNVRLKHTVNQ 702
            MSVID+LTRVD+IC KYDKYD+E+++++N+SGDDAF RLYA+VD+DI++L QKAETASK++GKASAVAINAEIRRTKARLLEEVPKLQ+LA+KKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWA+S SR +IKFDSDGRFDDEYFQ TE+SS+FR EYEMRRI+Q   LDVIAEGLDTLKDMAHDMNEELDRQVPLMDEID+KVD+A+SDLKNTNVRLK TV Q
Sbjct:    1 MSVIDLLTRVDTICNKYDKYDVERHRESNLSGDDAFARLYATVDADIEALNQKAETASKEKGKASAVAINAEIRRTKARLLEEVPKLQKLAVKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWASSGSRPDIKFDSDGRFDDEYFQQTEESSRFRNEYEMRRIKQDQGLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDTKVDQAASDLKNTNVRLKDTVIQ 235
[Close]
BLAST of Ca_17123 vs. TrEMBL
Match: I1NA77_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 1.319e-105
Identity = 196/235 (83.40%), Postives = 219/235 (93.19%), Query Frame = 1 
Query:    1 MSVIDILTRVDSICKKYDKYDLEKNKDANVSGDDAFVRLYASVDSDIDSLLQKAETASKDRGKASAVAINAEIRRTKARLLEEVPKLQRLAIKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWAASASRAEIKFDSDGRFDDEYFQSTEQSSQFRQEYEMRRIRQ-ASLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDSKVDKASSDLKNTNVRLKHTVNQ 702
            MSVIDILTRVDSICKKYDKYD+EK +D+N+S DDAF +LYASVD+DI++LLQKAETA K++ KAS VAINAEIRRTKARLLEEVPKLQRLA+KKVKGLSSQEFAARNDL LALP+RIQAIPDG PAAPKQTG WAASASR  IKFDSDG+FDDEYFQ TE+SS+FRQEYEMR+++Q   LD+IAEGLDTLK+MAHDMNEELDRQVPLMDEID+KVD+ASSDLKNTNVRL+ TVNQ
Sbjct:    1 MSVIDILTRVDSICKKYDKYDVEKQRDSNLSADDAFAKLYASVDADIEALLQKAETADKEKSKASTVAINAEIRRTKARLLEEVPKLQRLAMKKVKGLSSQEFAARNDLALALPDRIQAIPDGAPAAPKQTGSWAASASRPGIKFDSDGKFDDEYFQQTEESSRFRQEYEMRKMKQDQGLDMIAEGLDTLKNMAHDMNEELDRQVPLMDEIDTKVDRASSDLKNTNVRLRDTVNQ 235
[Close]
BLAST of Ca_17123 vs. TrEMBL
Match: I3S3U8_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 387.497 bits (994), Expect = 5.011e-105
Identity = 195/235 (82.98%), Postives = 220/235 (93.62%), Query Frame = 1 
Query:    1 MSVIDILTRVDSICKKYDKYDLEKNKDANVSGDDAFVRLYASVDSDIDSLLQKAETASKDRGKASAVAINAEIRRTKARLLEEVPKLQRLAIKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWAASASRAEIKFDSDGRFDDEYFQSTEQSSQFRQEYEMRRIRQ-ASLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDSKVDKASSDLKNTNVRLKHTVNQ 702
            MSVID+LTRVD+IC KYDKYD+E+++++N+SGDDAF RLYA+VD+DI++L QKAETASK++GKASAVAINAEIRRTKARLLEEVPKLQ+LA+KKVKGLSSQEFAARNDLV ALPERIQAIPDGTPAAPKQTGGWA+S SR +IKFDSDGRFDDEYFQ TE+SS+FR EYEMRRI+Q   LDVI EGLDTLKDMAHDMNEELDRQVPLMDEID+KV +A+SDLKNTNVRLK TV Q
Sbjct:    1 MSVIDLLTRVDTICNKYDKYDVERHRESNLSGDDAFARLYATVDADIEALNQKAETASKEKGKASAVAINAEIRRTKARLLEEVPKLQKLAVKKVKGLSSQEFAARNDLVPALPERIQAIPDGTPAAPKQTGGWASSGSRPDIKFDSDGRFDDEYFQQTEESSRFRNEYEMRRIKQDQGLDVIVEGLDTLKDMAHDMNEELDRQVPLMDEIDTKVGQAASDLKNTNVRLKDTVIQ 235
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BLAST of Ca_17123 vs. TrEMBL
Match: D7TQJ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g02130 PE=4 SV=1)

HSP 1 Score: 383.259 bits (983), Expect = 9.450e-104
Identity = 193/235 (82.13%), Postives = 216/235 (91.91%), Query Frame = 1 
Query:    1 MSVIDILTRVDSICKKYDKYDLEKNKDANVSGDDAFVRLYASVDSDIDSLLQKAETASKDRGKASAVAINAEIRRTKARLLEEVPKLQRLAIKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWAASASRAEIKFDSDGRFDDEYFQSTEQSSQFRQEYEMRRIRQ-ASLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDSKVDKASSDLKNTNVRLKHTVNQ 702
            M+VIDILTRVD+ICKKYDKYD++K KD NVSGDDAF RLYA V++DI++ LQKA+TAS ++ +ASAVA+NAEIRRTKARLLEEVPKLQRLAIKKVKGLS++E AARNDLVLALP+RIQAIPDG   APKQTGGWAASASR EIKFDSDGRFD EYFQ TE+SSQFRQEYEMR++ Q   LDVIAEGLDTLK+MAHDMNEELDRQVPLMDEID+KVDKA++DLKNTNVRLK TVNQ
Sbjct:    1 MTVIDILTRVDAICKKYDKYDIDKQKDLNVSGDDAFARLYAVVEADIEAALQKADTASNEKNRASAVALNAEIRRTKARLLEEVPKLQRLAIKKVKGLSTEELAARNDLVLALPDRIQAIPDGAATAPKQTGGWAASASRTEIKFDSDGRFDSEYFQQTEESSQFRQEYEMRKMNQDQGLDVIAEGLDTLKNMAHDMNEELDRQVPLMDEIDTKVDKATADLKNTNVRLKDTVNQ 235
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BLAST of Ca_17123 vs. TrEMBL
Match: C6TKX1_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 381.333 bits (978), Expect = 3.591e-103
Identity = 192/235 (81.70%), Postives = 218/235 (92.77%), Query Frame = 1 
Query:    1 MSVIDILTRVDSICKKYDKYDLEKNKDANVSGDDAFVRLYASVDSDIDSLLQKAETASKDRGKASAVAINAEIRRTKARLLEEVPKLQRLAIKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWAASASRAEIKFDSDGRFDDEYFQSTEQSSQFRQEYEMRRIRQ-ASLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDSKVDKASSDLKNTNVRLKHTVNQ 702
            MSVIDILTRVDSICKKYDKYD++  +D+N+S DDAF +LYASVD+DI++LLQKA+TASK++ KAS VAINAEIRRTKARLLEEVPKLQRLA+KKVKGLSSQEFAARNDL LALP+RIQAIPDGTPAA KQ+G WAASASR  IKFDSDG+FDDEYFQ TE+SS FR+EYEMR+++Q   LD+IAEGLDTLK+MAHDMNEELDRQVPLMDEID+KVD+ASSDLKNTNVRL+ TVNQ
Sbjct:    1 MSVIDILTRVDSICKKYDKYDVQSQRDSNLSSDDAFAKLYASVDADIEALLQKADTASKEKSKASTVAINAEIRRTKARLLEEVPKLQRLAMKKVKGLSSQEFAARNDLALALPDRIQAIPDGTPAASKQSGSWAASASRPGIKFDSDGKFDDEYFQQTEESSGFRKEYEMRKMKQDQGLDMIAEGLDTLKNMAHDMNEELDRQVPLMDEIDTKVDRASSDLKNTNVRLRDTVNQ 235
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BLAST of Ca_17123 vs. TrEMBL
Match: B9IJ24_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_825249 PE=4 SV=1)

HSP 1 Score: 380.178 bits (975), Expect = 8.000e-103
Identity = 190/235 (80.85%), Postives = 216/235 (91.91%), Query Frame = 1 
Query:    1 MSVIDILTRVDSICKKYDKYDLEKNKDANVSGDDAFVRLYASVDSDIDSLLQKAETASKDRGKASAVAINAEIRRTKARLLEEVPKLQRLAIKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWAASASRAEIKFDSDGRFDDEYFQSTEQSSQFRQEYEMRRIRQ-ASLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDSKVDKASSDLKNTNVRLKHTVNQ 702
            MSVIDILTRVD+IC KYDKYD+EK KD NVSGDDAF RLYA++DSDI++  QKAE ASK++ KASAVAINAE+RRTKARLLEEVPKLQRLA+KKVKGLS++E AARNDLVLALP+RIQAIPDGT AAPKQTGGW  SA RAEIKFDSDG+FD+EYFQ TE SSQFRQEYEMR+++Q   LD+I++GLDTLK+MAHDMNEE+DRQVPLMDEID+KVDKA++DLKNTNVRLK TVNQ
Sbjct:    1 MSVIDILTRVDAICNKYDKYDIEKQKDLNVSGDDAFARLYAAIDSDIEAAHQKAELASKEKSKASAVAINAELRRTKARLLEEVPKLQRLAVKKVKGLSTEELAARNDLVLALPDRIQAIPDGTAAAPKQTGGWGTSAPRAEIKFDSDGQFDNEYFQETETSSQFRQEYEMRKMKQDQGLDMISDGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAAADLKNTNVRLKDTVNQ 235
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BLAST of Ca_17123 vs. DB:Swiss
Match: SYP71_ARATH (Syntaxin-71 OS=Arabidopsis thaliana OX=3702 GN=SYP71 PE=1 SV=1)

HSP 1 Score: 355.14 bits (910), Expect = 9.283e-121
Identity = 168/237 (70.89%), Postives = 207/237 (87.34%), Query Frame = 1 
Query:    1 MSVIDILTRVDSICKKYDKYDLEKNKDANVSGDDAFVRLYASVDSDIDSLLQKAETASKDRGKASAVAINAEIRRTKARLLEEVPKLQRLAIKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGGW--AASASRAEIKFDSDGRFDDEYFQSTEQSSQFRQEYEMRRIRQA-SLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDSKVDKASSDLKNTNVRLKHTVNQ 702
            M+VIDILTRVDSICKKYDKYD++K ++AN+SGDDAF RLY + ++ I++ L+KAE  +K++ +A+AVA+NAEIRRTKARL EEVPKLQRLA+K+VKGL+++E AARNDLVLALP RI+AIPDGT   PK T  W  +++ SR +IKFDSDGRFDD+YFQ + +SSQFRQEYEMR+I+Q   LD+I+EGLD LK+MA DMNEELDRQVPLMDEID+KVD+A+SDLKNTNVRLK TVNQ
Sbjct:    1 MTVIDILTRVDSICKKYDKYDVDKQREANISGDDAFARLYGAFETQIETALEKAELVTKEKNRAAAVAMNAEIRRTKARLSEEVPKLQRLAVKRVKGLTTEELAARNDLVLALPARIEAIPDGTAGGPKSTSAWTPSSTTSRPDIKFDSDGRFDDDYFQESNESSQFRQEYEMRKIKQEQGLDMISEGLDALKNMASDMNEELDRQVPLMDEIDTKVDRATSDLKNTNVRLKDTVNQ 237
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BLAST of Ca_17123 vs. DB:Swiss
Match: SYP73_ARATH (Syntaxin-73 OS=Arabidopsis thaliana OX=3702 GN=SYP73 PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 8.566e-103
Identity = 154/237 (64.98%), Postives = 193/237 (81.43%), Query Frame = 1 
Query:    1 MSVIDILTRVDSICKKYDKYDLEKNKDANVSGDDAFVRLYASVDSDIDSLLQKAETASKDRGKASAVAINAEIRRTKARLLEEVPKLQRLAIKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWAASASRAEIKFD---SDGRFDDEYFQSTEQSSQFRQEYEMRRIRQASLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDSKVDKASSDLKNTNVRLKHTVNQ 702
            M VID++TRVDSICKKY+KYD+ + +DANVSGDDAF RLY++V+  ++++LQK E  S +  KA AVA+NAEIRRTKARLLE +PKLQRL++KKVKGLS +E  ARNDLVL+L ++I+AIP+ +  AP   GGW AS S + I+FD   SD R   EYFQ T +S QF+QEYEM+RI+QA LD IAEGLDTLK+MA D+NEELDRQ PLMDEID+K+DKA++DLK+TNVRLK TV +
Sbjct:    1 MGVIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSETNKAKAVAMNAEIRRTKARLLEGIPKLQRLSLKKVKGLSKEELDARNDLVLSLRDKIEAIPESS--AP-VVGGWEASTSYSNIRFDTNVSDDRIGSEYFQPTGESDQFKQEYEMKRIKQARLDYIAEGLDTLKNMAQDINEELDRQEPLMDEIDTKIDKAATDLKSTNVRLKDTVTK 234
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BLAST of Ca_17123 vs. DB:Swiss
Match: SYP72_ARATH (Syntaxin-72 OS=Arabidopsis thaliana OX=3702 GN=SYP72 PE=2 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 1.724e-93
Identity = 145/238 (60.92%), Postives = 189/238 (79.41%), Query Frame = 1 
Query:    1 MSVIDILTRVDSICKKYDKYDLEKNKDANVSGDDAFVRLYASVDSDIDSLLQKAETASKDRGKASAVAINAEIRRTKARLLEEVPKLQRLAIKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGG-W-AASASRAEIKFD-SDGRFDDEYFQSTEQSSQFRQEYEMRRIRQ-ASLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDSKVDKASSDLKNTNVRLKHTVNQ 702
            M VIDI+ RVD ICKKYDKYD++K+++   SGDDAF RL+ S+DSDI+++L+KAE AS ++ +A+AVA+NAE+RRTKARL E+V KLQ+LA+KK+KGL+ +E  +R DLV+AL +R+QAIPDG     KQ    W  ASA    IKFD S+   DD +FQ +E+SSQFRQEYEMRR +Q   LD+I+EGLD LK++A DMNEELD+QVPLM+E+++KVD A+SDLKNTNVRLK  + Q
Sbjct:    1 MPVIDIIFRVDEICKKYDKYDIDKHREIGASGDDAFSRLFTSIDSDIEAVLRKAELASTEKNRAAAVAMNAEVRRTKARLAEDVVKLQKLAVKKIKGLTREERESRCDLVIALADRLQAIPDGNEHGAKQANSDWGGASAPNKNIKFDMSEEDMDDGFFQQSEESSQFRQEYEMRRKKQDEGLDIISEGLDALKNLARDMNEELDKQVPLMEEMETKVDGATSDLKNTNVRLKKQLVQ 238
The following BLAST results are available for this feature:
BLAST of Ca_17123 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
SYP71_ARATH1.034e-9271.31Syntaxin-71 OS=Arabidopsis thaliana GN=SYP71 PE=1 ... [more]
SYP73_ARATH2.642e-8064.98Syntaxin-73 OS=Arabidopsis thaliana GN=SYP73 PE=2 ... [more]
SYP72_ARATH6.304e-7460.92Syntaxin-72 OS=Arabidopsis thaliana GN=SYP72 PE=2 ... [more]
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BLAST of Ca_17123 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7IBL3_MEDTR1.900e-11289.79Syntaxin-71 OS=Medicago truncatula GN=MTR_1g066460... [more]
I1LZ35_SOYBN2.743e-11188.94Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I1L8U0_SOYBN3.583e-11188.09Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I1NA78_SOYBN4.842e-10884.62Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
K0J6E7_LOTJA4.099e-10784.26SNARE protein OS=Lotus japonicus GN=LjSYP71 PE=2 S... [more]
I1NA77_SOYBN1.319e-10583.40Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I3S3U8_LOTJA5.011e-10582.98Uncharacterized protein OS=Lotus japonicus PE=2 SV... [more]
D7TQJ1_VITVI9.450e-10482.13Putative uncharacterized protein OS=Vitis vinifera... [more]
C6TKX1_SOYBN3.591e-10381.70Uncharacterized protein OS=Glycine max PE=2 SV=1[more]
B9IJ24_POPTR8.000e-10380.85Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]

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BLAST of Ca_17123 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
SYP71_ARATH9.283e-12170.89Syntaxin-71 OS=Arabidopsis thaliana OX=3702 GN=SYP... [more]
SYP73_ARATH8.566e-10364.98Syntaxin-73 OS=Arabidopsis thaliana OX=3702 GN=SYP... [more]
SYP72_ARATH1.724e-9360.92Syntaxin-72 OS=Arabidopsis thaliana OX=3702 GN=SYP... [more]
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000727Target SNARE coiled-coil domainPFAMPF05739SNAREcoord: 175..234
score: 3.4
IPR000727Target SNARE coiled-coil domainSMARTSM00397Helical region found in SNAREscoord: 164..231
score: 3.2
IPR000727Target SNARE coiled-coil domainPROFILEPS50192T_SNAREcoord: 169..231
score: 14
IPR006012Syntaxin/epimorphin, conserved sitePROSITEPS00914SYNTAXINcoord: 175..214
score
NoneNo IPR availableGENE3D1.20.5.110no descriptioncoord: 178..230
score: 5
NoneNo IPR availablePANTHERPTHR12380FAMILY NOT NAMEDcoord: 1..234
score: 1.3e
NoneNo IPR availablePANTHERPTHR12380:SF24OS05G0553700 PROTEINcoord: 1..234
score: 1.3e
NoneNo IPR availableSEGsegsegcoord: 8..19
score: NAcoord: 28..42
score
NoneNo IPR availableSEGsegsegcoord: 3..14
score
NoneNo IPR availableSEGsegsegcoord: 33..43
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_17123_v1.0_kabuli ID=Ca_17123_v1.0_kabuli; Name=Ca_17123; organism=Cicer arietinum; type=mRNA; length=1269bp
ATGAGCGTAATCGACATTCTAACCCGAGTTGATTCTATTTGCAAAAAGTA
CGACAAATACGACCTCGAAAAGAACAAGGATGCCAATGTCTCAGGCGATG
ATGCCTTCGTCAGACTCTACGCCTCTGTTGACTCCGACATCGACTCCCTA
CTCCAGAAAGCAGAAACTGCTTCCAAGGATAGAGGGAAGGCATCTGCTGT
AGCGATTAATGCGGAGATTCGTCGTACTAAGGCTCGGTTGCTTGAAGAGG
TTCCCAAGTTGCAGAGGTTGGCTATCAAAAAGGTAAAAGGGCTTTCGTCG
CAAGAATTTGCTGCCCGTAATGATCTGGTTCTTGCGTTGCCAGAAAGAAT
CCAAGCTATCCCAGATGGGACTCCTGCTGCGCCAAAACAAACTGGTGGCT
GGGCAGCTTCTGCCTCACGTGCTGAAATTAAATTTGATTCAGATGGGCGG
TTTGATGATGAATACTTCCAGTCAACTGAGCAATCAAGTCAATTCAGGCA
GGAATATGAAATGCGTAGAATAAGACAGGCAAGTTTAGATGTGATTGCAG
AAGGATTGGATACTTTGAAAGACATGGCACATGATATGAATGAGGAACTG
GATAGACAAGTTCCCCTGATGGACGAGATTGACAGTAAGGTCGACAAGGC
GTCCTCTGATCTTAAGAATACTAATGTTAGACTTAAACACACCGTGAATC
AGAAAGCGGATAACACAACAGAAAGTCTGGGCCTCGTGGGAGAAGCAAAG
GTAGAACAGAAATTGAAAGACCCTGCAACATTCTTGGAGGGTCAGGTTTT
GCTCAGACTGGAACCTCCAGACAATGGTACTTCCACCGAGCTGCCAAGAC
TAGCACCGCAACTCCATAATCTATTGGGAATATTAAACATGGTGGCAAAG
CTGCCATTGCTAAAACTACCGGACTCACCTCGTGGTGCGGTGCACTTGAG
AGCTTTTGTTACCCAGATGGAAGGGAGGAGAGCTGCCGCACCAACCTCTC
GTGTTGTTTGCATATATGAAAAGAAACTGTTGACTAGGCCGTCTAGGCTA
CGGTCCCAATTTCACATATTGGGCCCAGGTGTGGTCTTAATGAGTCAGAC
CTTTATTAGTGGAAAAGGGTGCAAGTCCTACAGAATGATATTTGTTCTAC
ACCTCCACGCGGGCTCTTTTCAGCTAATTTTCAACACTTCAAATAGAATT
GGGCCTTCATCTTGCCAACATCTGAAGCTACGAGTCTGCAAGAGTTTTTG
GGGCTATTTCCTTACATAA
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protein sequence of Ca_17123_v1.0_kabuli

>Ca_17123_v1.0_kabuli ID=Ca_17123_v1.0_kabuli; Name=Ca_17123_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=422bp
MSVIDILTRVDSICKKYDKYDLEKNKDANVSGDDAFVRLYASVDSDIDSL
LQKAETASKDRGKASAVAINAEIRRTKARLLEEVPKLQRLAIKKVKGLSS
QEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWAASASRAEIKFDSDGR
FDDEYFQSTEQSSQFRQEYEMRRIRQASLDVIAEGLDTLKDMAHDMNEEL
DRQVPLMDEIDSKVDKASSDLKNTNVRLKHTVNQKADNTTESLGLVGEAK
VEQKLKDPATFLEGQVLLRLEPPDNGTSTELPRLAPQLHNLLGILNMVAK
LPLLKLPDSPRGAVHLRAFVTQMEGRRAAAPTSRVVCIYEKKLLTRPSRL
RSQFHILGPGVVLMSQTFISGKGCKSYRMIFVLHLHAGSFQLIFNTSNRI
GPSSCQHLKLRVCKSFWGYFLT
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mRNA from alignment at Ca4:19866882..19870050+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_17123_v1.0_kabuli ID=Ca_17123_v1.0_kabuli; Name=Ca_17123; organism=Cicer arietinum; type=mRNA; length=3169bp; location=Sequence derived from: Ca4:19866882..19870050+ (Cicer arietinum
ATGAGCGTAATCGACATTCTAACCCGAGTTGATTCTATTTGCAAAAAGTA
CGACAAATACGACCTCGAAAAGAACAAGGATGCCAATGTCTCAGGCGATG
ATGCCTTCGTCAGACTCTACGCCTCTGTTGACTCCGACATCGACTCCCTA
CTCCAGGTACCTCACCAAAATATCATAAAATTGTGCCCTAATTAGTCAAC
TATTCTTCTGAAGTTTTGAAATTTGGGTTTCAACGGAGTCAATTGTTTTG
TTTTTTCATTGATTGAAATTTTGTGCAGAAAGCAGAAACTGCTTCCAAGG
ATAGAGGGAAGGCATCTGCTGTAGCGATTAATGCGGAGATTCGTCGTACT
AAGGCTCGGTTGCTTGAAGAGGTTCCCAAGTTGCAGAGGTTGGCTATCAA
AAAGGTTGTTTTTTTATTTGAATTTATGTTGGAATGAGTAATTGAGATTT
GAGGTATTTTAATTGGGAATTGTCAACAATTTTGTGACTAGAGCTTTTTA
ACTGTAAATAAACGGCTTGATCTGCCAAATTGGTGATAATTTATGAGTTA
ATAGTTATTTTGGTTCTTGAATCTTGTCCTTGAATATATCAAAATTATGA
AACTTACCCGAATGTGTCTTTTGTTAGTCAATTTGATCCTTGTATATATA
TATATATATGTTTTTTGTTGGTTAGTTTGGTCTTCCGACGTGTCTTCCAT
TAGTCAGTTCAGTCTTTTTGAAATTACTAACAGAAAACACACTCAGGGTG
TATTCTGTAATTTCAAACACTCAAGGACTATAGTGAGTGACACTGCCTCA
CACATCTAGGACTAAAATGGCTGTTTACTCTAATATAGCCAGTAATTTGT
TGGGAGTTAAGATAATTTGTTCAATTGATTTGAAGATCTCTTTTATGAAA
TTTGAAGTTTGAGAAAAGACATGAGAAATAAATCCAATTTCTCTATTGTA
GGACACCCATTTTTAGTTTTCTAGCAGTGCAACTATCTATCTTTGAAAGG
GGCAGACTTGTTATTTCTGCGTGTAACTCTGATTTTTTCAGTCTATTACT
GAGCTTTGCATGATGCATGATCCAATGTATCCACAGGTAAAAGGGCTTTC
GTCGCAAGAATTTGCTGCCCGTAATGATCTGGTTCTTGCGTTGCCAGAAA
GAATCCAAGCTATCCCAGATGGGACTCCTGCTGCGCCAAAACAAACTGGT
GGCTGGGCAGCTTCTGCCTCACGTGCTGAAATTAAATTTGATTCAGGTAA
TTGAAGCTATCCATGCCTCTCATCACTGTCATCAGGGTCATGCAACTACA
GCATTTAATCTGTTTGGGTGTATTATTGAATCATCTTGATTACAGATGGG
CGGTTTGATGATGAATACTTCCAGTCAACTGAGCAATCAAGTCAATTCAG
GCAGGAATATGAAATGCGTAGAATAAGACAGGCAAGTAACTTTTAGCAGT
TTGAGAAGTTTGCTGTGTTCCTTATCACTCCTGCAATGATTTCAACTTTC
AAATCTAATTGGGCGTTAACTTTTCAGGATCAAGGTTTAGATGTGATTGC
AGAAGGATTGGATACTTTGAAAGACATGGCACATGATATGAATGAGGTCA
GTGTCTTTTTAACATTTGTCTTCCTTCCTGTAGCTGCTTGTGTGTTCGTA
ATAGTTTTTACATTTGTCATTTATTCGATGAATACAGGAACTGGATAGAC
AAGTTCCCCTGATGGACGAGATTGACAGTAAGGTAAGAATTATCGGTTTT
CTCATTACCTCAAACAAAGCCAAAATCTTGGAAGCACGCTTTCGGAGTTT
TATTTAAAAAGTTGAAATAATATGCAATTGTTTGTCATCTTTACAGGTCG
ACAAGGCGTCCTCTGATCTTAAGAATACTAATGTTAGACTTAAACACACC
GTGAATCAGGTTATCTAACTACACCTCTTTTGGTCTTAGATTTCCATCAA
TTTCCATTTTTATTAGTGATAGATTTATTGCTGAATCTTATATGATTTTC
TGCTTTTATCCAGCTTCGATCCAGCCGAAACTTCTGTATTGATATTGTTT
TATTGATTATAATTTTGGGAATTGCTGCCTACTTATACAAGTAAGACTCC
CATCTCATTTCAGTTTTCATTAAATTGATAAAGCACAGCACTTCTTTTTC
ATAAATTCCAATCGTAAATTTAAAAATTAGACATCCTACGGTAAATCTAA
AGTTGGGCATAGTATACAACCTTTATTGTGGAAACATTTTGTTCTCTTTC
TGTCTTATTTCTCATATACATTTTTTTATTAGTGTGATTAAGGCATTCAT
TTGAAATTAGAGGAGATTGTGATTGATAGATCTGTTATTGTTAGTTAAGA
AGTTAGTTAGTGGATGTGTTCAGAGATAGTTACTTAGTTGGGCCAAATAA
GGCCTGCTTTCTCTAAATAGAGAGGAGTGATTAGGAAGGGGATCATATTG
TCATTTGAGGTTCAAGAAGAGAAGCTAGAACAAGTGACATCTGAAAATGA
AAGCAAACAATTGGAAGTGAGAAGAACAGAAATGAATCCAGAAGGGAAAC
GAGAGTCAATGCGGCTGAAAAACCAAGAAAATAATCATGAATGCGTGGGA
AGAAAGCGGATAACACAACAGAAAGTCTGGGCCTCGTGGGAGAAGCAAAG
GTAGAACAGAAATTGAAAGACCCTGCAACATTCTTGGAGGGTCAGGTTTT
GCTCAGACTGGAACCTCCAGACAATGGTACTTCCACCGAGCTGCCAAGAC
TAGCACCGCAACTCCATAATCTATTGGGAATATTAAACATGGTGGCAAAG
CTGCCATTGCTAAAACTACCGGACTCACCTCGTGGTGCGGTGCACTTGAG
AGCTTTTGTTACCCAGATGGAAGGGAGGAGAGCTGCCGCACCAACCTCTC
GTGTTGTTTGCATATATGAAAAGAAACTGTTGACTAGGCCGTCTAGGCTA
CGGTCCCAATTTCACATATTGGGCCCAGGTGTGGTCTTAATGAGTCAGAC
CTTTATTAGTGGAAAAGGGTGCAAGTCCTACAGAATGATATTTGTTCTAC
ACCTCCACGCGGGCTCTTTTCAGCTAATTTTCAACACTTCAAATAGAATT
GGGCCTTCATCTTGCCAACATCTGAAGCTACGAGTCTGCAAGAGTTTTTG
GGGCTATTTCCTTACATAA
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Coding sequence (CDS) from alignment at Ca4:19866882..19870050+

>Ca_17123_v1.0_kabuli ID=Ca_17123_v1.0_kabuli; Name=Ca_17123; organism=Cicer arietinum; type=CDS; length=1269bp; location=Sequence derived from: Ca4:19866882..19870050+ (Cicer arietinum
ATGAGCGTAATCGACATTCTAACCCGAGTTGATTCTATTTGCAAAAAGTA
CGACAAATACGACCTCGAAAAGAACAAGGATGCCAATGTCTCAGGCGATG
ATGCCTTCGTCAGACTCTACGCCTCTGTTGACTCCGACATCGACTCCCTA
CTCCAGAAAGCAGAAACTGCTTCCAAGGATAGAGGGAAGGCATCTGCTGT
AGCGATTAATGCGGAGATTCGTCGTACTAAGGCTCGGTTGCTTGAAGAGG
TTCCCAAGTTGCAGAGGTTGGCTATCAAAAAGGTAAAAGGGCTTTCGTCG
CAAGAATTTGCTGCCCGTAATGATCTGGTTCTTGCGTTGCCAGAAAGAAT
CCAAGCTATCCCAGATGGGACTCCTGCTGCGCCAAAACAAACTGGTGGCT
GGGCAGCTTCTGCCTCACGTGCTGAAATTAAATTTGATTCAGATGGGCGG
TTTGATGATGAATACTTCCAGTCAACTGAGCAATCAAGTCAATTCAGGCA
GGAATATGAAATGCGTAGAATAAGACAGGCAAGTTTAGATGTGATTGCAG
AAGGATTGGATACTTTGAAAGACATGGCACATGATATGAATGAGGAACTG
GATAGACAAGTTCCCCTGATGGACGAGATTGACAGTAAGGTCGACAAGGC
GTCCTCTGATCTTAAGAATACTAATGTTAGACTTAAACACACCGTGAATC
AGAAAGCGGATAACACAACAGAAAGTCTGGGCCTCGTGGGAGAAGCAAAG
GTAGAACAGAAATTGAAAGACCCTGCAACATTCTTGGAGGGTCAGGTTTT
GCTCAGACTGGAACCTCCAGACAATGGTACTTCCACCGAGCTGCCAAGAC
TAGCACCGCAACTCCATAATCTATTGGGAATATTAAACATGGTGGCAAAG
CTGCCATTGCTAAAACTACCGGACTCACCTCGTGGTGCGGTGCACTTGAG
AGCTTTTGTTACCCAGATGGAAGGGAGGAGAGCTGCCGCACCAACCTCTC
GTGTTGTTTGCATATATGAAAAGAAACTGTTGACTAGGCCGTCTAGGCTA
CGGTCCCAATTTCACATATTGGGCCCAGGTGTGGTCTTAATGAGTCAGAC
CTTTATTAGTGGAAAAGGGTGCAAGTCCTACAGAATGATATTTGTTCTAC
ACCTCCACGCGGGCTCTTTTCAGCTAATTTTCAACACTTCAAATAGAATT
GGGCCTTCATCTTGCCAACATCTGAAGCTACGAGTCTGCAAGAGTTTTTG
GGGCTATTTCCTTACATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR006012Syntaxin/epimorphin_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005484SNAP receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane