Ca_19043, Ca_19043_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_19043
Unique NameCa_19043_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length858
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca4chromosomeCa4:20872920..20873861 -Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR258Pisum sativum Cameor genome v1aPisum sativum
capsR347Pisum sativum Cameor genome v1aPisum sativum
cavuR264Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR380Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR391Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0453Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0161Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0282Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0903Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0953Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1204Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL387Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL639Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR254Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR320Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR294Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR333Vicia faba cv. Tiffany genome v1.0Vicia faba
cavrvR356Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR355Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR393Vicia sativa cv. Studenica genome v1.0Vicia sativa
cacanR131Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL074Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL362Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL468Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL636Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR308Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
LR48_mrnaVigan02g075500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-KK1_006358Cajanus cajan Asha genome v1.0Cajanus cajan
Psat3g037480.1Pisum sativum Cameor genome v1aPisum sativum
Psat06G0210700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
jg1219.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
jg31890.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.3g036440.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat03G0147800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun01g167600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Phvul.007G225200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Va02G018730.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_014655592.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat6g077640.1Pisum sativum Cameor genome v1aPisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004497500.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_19043-CDS1Ca_19043-CDS1Cicer arietinumCDS
Ca_19043-CDS2Ca_19043-CDS2Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_19043_v1.0_kabuliCa_19043_v1.0_kabuliCicer arietinumpolypeptide


Homology
BLAST of Ca_19043 vs. SwissProt
Match: LEAD8_DAUCA (Embryonic protein DC-8 OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.895e-17
Identity = 77/251 (30.68%), Postives = 102/251 (40.64%), Query Frame = 1
Query:  241 TGEVRDISANKSCGIYDSATQKSNXXXXXXXXXXXXXXXXXXXXXXCAVEKAREGKDATVNKLGEYKDCTAEKAKEG----------------------KDTAVDAAKRAMG-YLGDXXXXXXXXXXXXXXXXXXXXXXXXDKTKEM------LSGGDEEARKKVEGE--------------------NVKDEVFGGKTW-------RRGNEGVIKTEDTPTGAVAEKLKASDQMTGQTFNDVGPLDDEGV 825
            TGE +D SA K+    D+  +K+                         +EKA+E KD TV K GEYKD  AEKAKEG                      KD+A DAA++AM  +LG                            K+M        G  +EA+++ E +                    +VKD + G  T        ++  E VIK ++T  GAVAE LKA+DQM GQ FNDVG + DE V
Sbjct:  300 TGEYKDYSAQKAAETKDATMEKTKEYKDYTAQKAAETKD-------ATMEKAKEAKDTTVQKTGEYKDYAAEKAKEGKDVTVEKAKEGKDTTVGKMTELKDSAADAARKAMDMFLGKKEEVKGKAGETAEAAKEKYEDTEFAARKKMEELKLQEEGVKDEAKQRAEADRETAGDRGSAAKGTIFGAMGSVKDAIVGKLTMPSDVVKDKQQQEAVIKVDETRPGAVAEALKAADQMHGQAFNDVGKMGDEEV 543          

HSP 2 Score: 66.2402 bits (160), Expect = 2.806e-10
Identity = 53/192 (27.60%), Postives = 79/192 (41.15%), Query Frame = 1
Query:    4 ASRQPPPRHVEELNRTTEHDLNATASDEEKRG---VIGSVIKTVKDTYENARESIVGK-RDPADNSHTTTQVVHVYDHNDGVSTGEV---------------RDISANKSCGIYDSATQKSNXXXXXXXXXXXXXXXXXXXXXXCAVEKAREGKDATVNKLGEYKDCTAEKAKEGKDTAVDAAKRAMGYLGD 522
            A+ +   + + ++N+  E  +      EE  G   VIGS++K+V+ T   A+E +VGK  D A+ S   T     Y ++ G   G+V               +D +  K+    D   QK+                          +KA E KD T+ K GEYKD  A+KA E KDT    A  A    G+
Sbjct:   17 AAAELAAKELRDVNQDRERGIKVVEHKEEVSGGPGVIGSILKSVQGTLGQAKEVVVGKAHDTAEVSRENTD----YAYDKGREGGDVAAQKAEEAKEKAKMAKDTTMGKAGEYKDYTAQKAEEAKEKAAQKAEETKEKAGEYKNYTAQKAGEAKDTTLGKAGEYKDYAAQKAAEAKDTTAQKAAEAKEKTGE 204          
BLAST of Ca_19043 vs. TrEMBL
Match: G7I9D0_MEDTR (Late embryongenesis abundant protein OS=Medicago truncatula GN=MTR_1g061730 PE=4 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 3.738e-67
Identity = 169/362 (46.69%), Postives = 194/362 (53.59%), Query Frame = 1
Query:    1 MASRQPPPRHVEELNRTTEHDLNATASDEEKRGVIGSVIKTVKDTYENARESIVGKRDPADNSHTTTQVVHVYDHNDGVSTGEVRDISANKSCGIYDSATQ----------------------KSNXXXXXXXXXXXXXXXXXXXXXXCAVEKAREGKDATVNKLGEYKDCTAEKAKEGKD---------------------------------TAVDAAKRAMGYLGDXXXXXXXXXXXXXXXXXXXXXXXX----------------------DKTKEMLSGGDEEARKKVEGENVKDEVFGGKTWRRGNEGVIKTEDTPTGAVAEKLKASDQMTGQTFNDVGPLDDEGVTRVGLLDIKK 855
            M S+QP  RHVEE   T E        D+EK GVIGSV+K V DTYENARE++VGKRDP       T  VHV+D++D ++ GEVRDISAN+S G+YDSA Q                      K+N                       A EKA+EGKDAT+NK+GEYKD TAEKAKEGKD                                 +AVDAAKRAMGYLGD                                              DKTKEMLS  D+EA +K+E  N   + FG +TWRRGNEGVI+TEDT TGAVAE+LKA+DQMTGQTFNDVGPLDDEGVTRVGLLDIKK
Sbjct:    1 MGSKQP--RHVEENQLTKEQH------DQEKPGVIGSVMKAVHDTYENAREAVVGKRDP-------TTEVHVFDNDDRLTRGEVRDISANQSRGVYDSAAQKAKETKDATAQKAKETKDATMQKTNEYAGYAGEKAREAKDKAGEYKDYAAEKAKEGKDATMNKMGEYKDYTAEKAKEGKDATMNKMGEYKDYTAEKAKEGKDNTAWKIGEMKDSAVDAAKRAMGYLGDKKEEAKQKTAETAEAAKQKTAETAEAAKQKTAETAEAAKQKTVEAKDKTKEMLSEADKEAGRKMESGNYGRKGFGEETWRRGNEGVIRTEDTRTGAVAERLKAADQMTGQTFNDVGPLDDEGVTRVGLLDIKK 347          
BLAST of Ca_19043 vs. TrEMBL
Match: Q39871_SOYBN (Late embryongenesis abundant protein OS=Glycine max GN=MP2 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.651e-23
Identity = 70/173 (40.46%), Postives = 101/173 (58.38%), Query Frame = 1
Query:    4 ASRQPPPRHVEELNRTT-EHDLNATAS--------DEEKRGVIGSVIKTVKDTYENARESIVGKRDPADNSHTTTQVVH-VYDHNDGVS-TGEVRDISANKSCGIYDSATQKSNXXXXXXXXXXXXXXXXXXXXXXCAVEKAREGKDATVNKLGEYKDCTAEKAKEGKDTAVD 489
            A+ +   + +E++NR   + D    A         D++KRGVIGS+ K V+DTYENA+E++VGK++  +N+++ T+V+H V    D VS TGEVRDISA K+  IYDSAT  +N                       A +KA+E KDAT+ K GEY D  ++KAKE K T ++
Sbjct:   12 AAAKVAAKELEQVNRERRDRDFGVVAEQQQQHHQEDQQKRGVIGSMFKAVQDTYENAKEAVVGKKEATNNAYSNTEVIHDVNIQPDDVSATGEVRDISATKTHDIYDSATDNNNNKTGSKVGEYADY----------ASQKAKETKDATMEKAGEYTDYASQKAKEAKKTTME 174          

HSP 2 Score: 86.2705 bits (212), Expect = 1.262e-14
Identity = 54/150 (36.00%), Postives = 77/150 (51.33%), Query Frame = 1
Query:  388 EKAREGKDATVNKLGEYKDCTAEKAKEGKDTAVDAAKRAMGYLGDXXXXXXXXXXXXXXXXXXXXXXXXDKTKEMLSGGDEEARKKVEGENVKD-EVFGGKTWRRGNEGVIKTEDTPTGAVAEKLKASDQMTGQTFNDVGPLDDEGVTRV 834
            +K  E  +A  NK GE KD  AE A+  K+   + A+       +                        + TKE +SG  E AR+K+E   ++  E +GG    RG++ V+K E++  GA+AE LKA+DQ+ GQTFNDVG  D+EGV  V
Sbjct:  313 KKTAETAEAAKNKAGEIKDRAAETAEAAKNKTAETAEVTKNKALEMKDAAKDRTAETTDAAKQKTAQAKENTKENVSGAGETARRKMEEPKLQGKEGYGG----RGDKVVVKVEESRPGAIAETLKAADQIAGQTFNDVGRFDEEGVVNV 458          

HSP 3 Score: 73.9442 bits (180), Expect = 6.481e-11
Identity = 77/276 (27.90%), Postives = 104/276 (37.68%), Query Frame = 1
Query:   31 VEELNRTTEHDLNATASDEEKRGVIGSV----------IKTVKD-TYENARE-SIVGKRDPADNSHTTTQVVHVYDHNDGVSTGEVRDISANKSCGIYDSATQKSNXXXXXXXXXXXXXXXXXXXXXXCAVEKAREGKDATVNKLGEYKDCTAEKAKEG-----------KDTAVDAAKRAMGYLGDXXXXXXXXXXXXXXXXXXXXXXXXDKTKEMLSGGDEEARKKVEGENVKDEVFGGKTWRRGNEGVIKTEDTPTGAVAEKLKASDQMTGQT 789
            V +++ T  HD+  +A+D         V           K  KD T E A E +    +   +   TT +    Y         E +D + NK     D A +K+                        A EK +EGKDATVNK+GEYKD TAEKAKEG           KDTA DAAKRA+GYL                          + TK+  +   E A+ K  GE +KD     +T         +T +       E   A+   T +T
Sbjct:  105 VRDISATKTHDIYDSATDNNNNKTGSKVGEYADYASQKAKETKDATMEKAGEYTDYASQKAKEAKKTTMEKGGEYKDYSAEKAKERKDATVNKMGEYKDYAAEKAKEGKDATVNKMGEYKDY-------AAEKTKEGKDATVNKMGEYKDYTAEKAKEGKDTTLGKLGELKDTASDAAKRAVGYLSGKKEETKEMASETAEATANKAGEMKEATKKKTAETAEAAKNKA-GE-IKDR--AAETAEAAKNKTAETAEVTKNKALEMKDAAKDRTAET 369          
BLAST of Ca_19043 vs. TrEMBL
Match: F6HKF4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g04240 PE=4 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.259e-22
Identity = 97/279 (34.77%), Postives = 126/279 (45.16%), Query Frame = 1
Query:   61 DLNATASDEEKRGVIGSVIKTVKDTYENARESIVGKRDPADNSHTTTQVVHVYDHNDGVSTGEVRDISANKSCGIYDSATQKSNXXXXXXXXXXXXXXXXXXXXXXCAVEKAREGKDATVNKLGEYKDCTAEKAKEGKDTAV-----------DAAKRAMGYLGDXXXXXXXXXXXXXXXXXXXXXXXXDKTKEMLSGGDEEARKKVE-----GENVKDEVFGGKTWRR----GNEGV-IKTEDTPTGAVAEKLKASDQMTGQTFNDVGPLDDEGVTRV 834
            D  A  S E K        +T KDT   A +++  K   A+ +  T   V           GE +D +A K+ G+ D+   K+                        A EKA+E KDATV K  EYKD TA KA+EGKDT+V           DAA+RAM YL                          +  KE L+  +E AR+K+E     G+    E  G +T +     G +GV I   +TPTG VA  LKA+DQMT QTFNDVGPLD+E + RV
Sbjct:  132 DYTADKSKEAKDSAAEKARET-KDT--GAEKTVEHKNSAAEKAKETKDAV-------AGQAGEYKDYAAEKARGVKDTTLGKTGEYKDY------------------AAEKAKETKDATVQKAAEYKDYTAGKAEEGKDTSVGKITELKDSAADAARRAMEYL-----------TGKKEETKHKTSETAEAAKERLTETEEAARRKMEELKLKGKEEHKEAEGRETQQSKDAPGVKGVLINVRETPTGYVATALKAADQMTAQTFNDVGPLDEEEIARV 371          

HSP 2 Score: 77.7962 bits (190), Expect = 4.488e-12
Identity = 47/136 (34.56%), Postives = 71/136 (52.21%), Query Frame = 1
Query:   85 EEKRGVIGSVIKTVKDTYENARESIVGKRDPA-DNSHTTTQVVHVYDHNDGVSTGEVRDISANKSCGIYDSATQKSNXXXXXXXXXXXXXXXXXXXXXXCAVEKAREGKDATVNKLGEYKDCTAEKAKEGKDTAVD 489
            +++ GVIGSV++ V++TYE+A+E+  GK   A + +  T +V           TG+ +D +A K+ G+ D+A+QK+                        A EK RE KD T +K  E KD  AEKA+E KDT  +
Sbjct:   45 QQRPGVIGSVLRAVQETYEHAKEAATGKSQEAVEKTRETAEVASEKAREAAQKTGQTKDAAAEKTRGVSDAASQKAQE----------------------AKEKMRESKDYTADKSKEAKDSAAEKARETKDTGAE 158          
BLAST of Ca_19043 vs. TrEMBL
Match: I1L957_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.392e-21
Identity = 68/184 (36.96%), Postives = 101/184 (54.89%), Query Frame = 1
Query:    4 ASRQPPPRHVEELNRTTEHDLNATASDE----------EKRGVIGSVIKTVKDTYENARESIVGKRDPA--DNSHTTTQVVHVYD--HNDGVSTGEVRDISANKSCGIYDSATQKSNXXXXXXXXXXXXXXXXXXXXXXCAVEKAREGKDATVNKLGEYKDCTAEKAKEGKDTAVDAAKRAMGY 513
            A+ +   + +E+LNR  + D +   +D+          +KRGVIGS+ K V+DTYENA+E++VGK++P+   NS++T +V+H  D   +D  +  EVRD SA+KS GIY+SAT  +                          +KA+E KDAT  K GEY D  ++KAKE KD  ++ A     Y
Sbjct:   13 AAAKVAAKELEQLNREKDRDFSVGVADQHQQEEHQLDQQKRGVIGSMFKAVQDTYENAKEAVVGKKEPSTTTNSYSTREVIHDVDIQPDDAAAAREVRDKSASKSPGIYNSATADNKTGSKVGEYADY------------GSQKAKETKDATKEKAGEYTDYASQKAKETKDKTMEKAGEYTDY 184          

HSP 2 Score: 103.219 bits (256), Expect = 9.976e-20
Identity = 78/216 (36.11%), Postives = 97/216 (44.91%), Query Frame = 1
Query:  382 AVEKAREGKDATVNKLGEYKDCTAEKAKEGKDT-----------AVDAAKRAMGYLGDXXXXXXXXXXXXXXXXXXXXXXXXDKTKEMLSGGDEEARKKV-------------------------------EGENVKDEVFG---------------GKTW-------RRGNEGVIKTEDTPTGAVAEKLKASDQMTGQTFNDVGPLD-DEGVTRV 834
            A EKA+EGKDATVNK+GEYKD TAEKAKEGKDT           A DAAKRA+GYL                          + T+E  +G  E A+ K                                  +N K+ V G               GK +        RG++ V+K E++  GA+AE LKA+DQ+ GQTFNDVG  D +EGV  V
Sbjct:  229 AAEKAKEGKDATVNKMGEYKDYTAEKAKEGKDTTLGKLGELKDSAADAAKRAVGYLSGKTEETKEKVSETAEATANKAAEMKEATREKAAGTAEAAKNKAAEVKDRAAETAEAAKNKTAETAEAAKQKTAQAKDNAKENVSGADEGARRKMEDLRLRGKGYGSHESAGGRGDKVVVKVEESRPGAIAETLKAADQIAGQTFNDVGRFDEEEGVVNV 444          
BLAST of Ca_19043 vs. TrEMBL
Match: Q2N1E0_PHAVU (Group 3 late embryogenesis abundant protein OS=Phaseolus vulgaris GN=LEA3 PE=4 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.791e-19
Identity = 91/300 (30.33%), Postives = 125/300 (41.67%), Query Frame = 1
Query:    1 MASRQPPPR----------HVEELNRTTEHD---LNATASDEEKRGVIGSVIKTVKDTYENARESIVGKRDPADNSHTTTQVVH-VYDHNDGVSTGEVRDISANKSCGIYDS-ATQKSNXXXXXXXXXXXXXXXXXXXXXXCAVEKAREGKDA----------------------TVNKLGEYKDCTAEKAKEGKDTAVDAAKRAMGYLGDXXXXXXXXXXXXXXXXXXXXXXXXDKTKEMLSGGDEEARKKVEGENVKDEVFGGKTWRRGNEGVIKTEDTPTGAVAEKLKASDQMTGQT 789
            MASRQ   R           +E+ NR  + +   +    ++EEKRGVIGS+++ V+       E++VGK+D       TT+V+H V    D V+TGEVRDIS  KS GIYDS AT ++                       CA +KA+E KDA                      T+ K GEYKD  AEKAKEGKD  V+       Y  +                         K  E LSG  EE ++KV    V  +    +T     +   + +D      AE  +A+   T +T
Sbjct:    1 MASRQHEERAEAASKIAAKELEQANRERDREDVGVVDQLNNEEKRGVIGSMLRAVQ-------EAVVGKKDSVPAKSCTTEVIHDVNIKPDDVTTGEVRDISVAKSPGIYDSPATDETGSKVGEYAD--------------CASQKAKEAKDAAMAKAGDYADYASQKAKEAKDKTLEKGGEYKDYAAEKAKEGKDATVNKLGEYKDYTAEKTKEGKDTAMEKLGELKDSATEAAKKAVEYLSGKTEETKEKVSESAVIAKNKAAETAETAKDRAAEMKDAAKDKAAEAAEATKNKTAET 279          

HSP 2 Score: 78.5666 bits (192), Expect = 2.631e-12
Identity = 66/264 (25.00%), Postives = 107/264 (40.53%), Query Frame = 1
Query:   61 DLNATASDEEKRGVIGSVIKTVKDTYENARESIVGKRDPADNSHTTTQVVHVYDHNDGVSTGEVRDISANKSCGIYDSATQKSNXXXXXXXXXXXXXXXXXXXXXXCAVEKAREGKDATVNKLGEYKDCTAEKAKEGKDTAVDAAKRAMGYLGDXXXXXXXXXXXXXXXXXXXXXXXX-------DKTKEMLSGGDEEARKKVEGENVKDEVFGGKTWRRGNEGVIKTEDTPTGAVAEKLKASDQMTGQTFNDVGPLDDEGVTR 831
            +L  +A++  K+ V     KT +   + +  +++ K   A+ + T                 E  + + NK+    ++A  K                         A +KA E  DAT NK  E  +    KA E +D   DA + A     +                               DKTK  + G DE+AR+K+E  ++K + +   +  R ++ V+K E+T  GA+A+ LKA+DQ  GQTFNDVG   DE + +
Sbjct:  205 ELKDSATEAAKKAVEYLSGKTEETKEKVSESAVIAKNKAAETAETAKDRAAEMKDAAKDKAAEAAEATKNKTAETTEAAKNKGRGMKDKAAETAEAIKNKTAEMTEAAKKKAAETADATKNKTAETTEAAKNKAAEMRDKTWDATEAAKNKTWEATEAAKNRTAEMKDKAAETTEAAKQKTAQARDKTKGNVRGEDEDARRKLE--DLKLQGYKDISEGRADKVVMKVEETRPGAIADTLKAADQNAGQTFNDVGRFHDEEIVK 466          
BLAST of Ca_19043 vs. TrEMBL
Match: M0ZSF3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400002731 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.923e-16
Identity = 98/349 (28.08%), Postives = 134/349 (38.40%), Query Frame = 1
Query:   82 DEEKRGVIGSVIKTVKDTYENARESIVGKRDPADNSHTTTQVVHV-------------------------YDHNDGVST---------------GEVRDISANKSCGIYDSATQKS----NXXXXXXXXXXXXXXXXXXXXXXCAVEKAREGKDATVNKLGEYKDCTAEKAKEGKDT-----------AVDAAKRAMGYLG------------------DXXXXXXXXXXXXXXXXXXXXXXXXDKT----KEMLSGGDEEARKKVE------GENVKDE------VFGG-------------KTWRRGNEGVIKTEDTPTGAVAEKLKASDQMTGQTFNDVGPLDDEG 822
            +++K GVIGS+IK+V+ T  +A++++ GK      +H T QV                            Y  + G +T               GE  D +A+K+    D A +K+    +                       A +KA+E KD T+ K GEYKD TAEKAKEGKDT           A DAA+RAM  L                                            D+T    KE     +E  RKK+E      G++  D       +FG               T R G++ V+  +DT  G  A  LK +DQMTGQTFNDVG +D EG
Sbjct:   39 EQQKPGVIGSIIKSVQGTLGHAKDAVTGK------AHETAQVASDTADIAAENARRSKDAAADKMGEYADYAEDKGKATKASVSDKTQQVKNKAGEYTDSAADKAKQTKDYAAEKAKEAKDTTIDKAKEAKESATRKATEYEEYAEDKAKEAKDVTMQKTGEYKDYTAEKAKEGKDTTIGKLAELKDSAADAARRAMDMLTGKKEEAQQKVEETAEAAKQKADETEGAAKQKASETAGAAKQKADETAGAAKEKYHESEEATRKKMEEMKMHEGDDDHDRKVATGGIFGALGSILAPKHTTDETTTRGGSKIVVDVDDTRAGKTATTLKQADQMTGQTFNDVGRMDVEG 381          
BLAST of Ca_19043 vs. TrEMBL
Match: Q9FPW5_PHAVU (IAA-protein conjugate OS=Phaseolus vulgaris GN=iap1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.739e-16
Identity = 87/301 (28.90%), Postives = 130/301 (43.19%), Query Frame = 1
Query:   25 RHVEELNRTTEHDLNATAS-----DEEKRGVIGSVIKTVKDTYENARESIVGKRDPADNS----HTTTQVVHVYDHND-----------GVSTGEVRDISANKSCGIYDSATQKSNXXXXXXXXXXXXXXXXXXXXXXCAVEKAREGKDATVNKLGEYKDCTAEKAKEG-----------KDTAVDAAKRAMGYLGDXXXXXXXXXXXXXXXXXXXXXXXXDKTKEMLSGGDEEARKKVEGENVKDEVFGGKTWRRGNEGVIKTEDTPTGAVAEKLKASDQMTGQTFNDVGPLDDEGVTRV 834
            + +E++NR  +H  + T       DE + GVIGS+ +        A+E++VGK    + S     +  + V     ND           G   GE  D S  K+    D   QK+                          E+ +E KDAT+ K  EYKD TAEKAKE            KD+A DAAKRAMG+                           D+TK  +SG  E+ ++++E   V+D+ +G  T   G + VIK E++  GAVA+ +KA+++  G      G +++EG  RV
Sbjct:   58 KDLEDVNRMRDHTHSTTTFKEQRYDENRPGVIGSMFRA-------AKEAVVGKPHTVETSLSGNDSNRERVTKEQGNDSNRERVTKEQGGSKMGEYADYSTQKAKERKDERMQKAGEYTDFPTQKAKESKDY--------AERIKEAKDATLQKAAEYKDYTAEKAKEEKDSATGKLGELKDSAADAAKRAMGFF----------------------TGTRDETK--VSGTAEDNKRRIEEVRVQDKDYG--TGHGGEKLVIKMEESRPGAVADAMKAAERALG------GVMEEEGTLRV 311          
BLAST of Ca_19043 vs. TrEMBL
Match: I1JPV0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.141e-15
Identity = 86/296 (29.05%), Postives = 126/296 (42.57%), Query Frame = 1
Query:   25 RHVEELNRTTEHDLNATAS----DEEKRGVIGSVIKTVKDTYEN--------ARESIVGKRDP--ADNSHTTTQVVHVYDHNDGVSTGEVRDISANKSCGIYDSATQKSNXXXXXXXXXXXXXXXXXXXXXXCAVEKAREGKDATVNKLGEYKDCTAEKAKEGKDTAV-----------DAAKRAMGYLGDXXXXXXXXXXXXXXXXXXXXXXXXDKTKEMLSGGDEEARKKVEGENVKDEVFGGKTWR-RGNEGVIKTEDTPTGAVAEKLKASDQMTGQTFNDVGPLDDEGVTRV 834
            + +E+ NR  ++  N        DE K GVIGS+ +  K+            A+E+ +G+        +  T Q    Y         E +D +A K+    D+  QK+                          EKA+  KD TV K GEYKD TAEKA EGKD+AV           DAAKRAMG+                           D+T+E     +EE R+ ++   V+D+ +G  T R  G + VIK E++  GAVA+ LKA+++         G +++EGV  V
Sbjct:   58 KDLEDANRLRDNTFNTWKEQHQHDENKPGVIGSMFRAAKEAVVGKPHHEEVYAKETKMGEYSDYATQKARETKQKAGEYTDYAAQKAKETKDYAAEKAKNAKDTTVQKAGEYKDY------------------TAEKAKNAKDTTVQKAGEYKDYTAEKAIEGKDSAVGKLGELKESAADAAKRAMGFF---------------------TGGNKDQTREE----EEETRRSMQEVRVQDKEYG--TGRGTGEKLVIKMEESRPGAVADALKAANRAMD------GDMEEEGVLHV 302          
BLAST of Ca_19043 vs. TrEMBL
Match: C6T9C2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.947e-15
Identity = 87/292 (29.79%), Postives = 127/292 (43.49%), Query Frame = 1
Query:   25 RHVEELNRTTEHDLNATAS----DEEKRGVIGSVIKTVKDTYENARESIVGKRDPADNSHTTTQVVHVYDH------NDGVSTGEVRDISANKSCGIYDSATQKSNXXXXXXXXXXXXXXXXXXXXXXCAVEKAREGKDATVNKLGEYKDCTAEKAKEGKDTAV-----------DAAKRAMGYLGDXXXXXXXXXXXXXXXXXXXXXXXXDKTKEMLSGGDEEARKKVEGENVKDEVFGGKTWR-RGNEGVIKTEDTPTGAVAEKLKASDQMTGQTFNDVGPLDDEGVTRV 834
            + +E+ NR  ++  N        DE K GVIGS+ +        A+E++VGK    +     T++    D+            GE  D +A K+    D A +K+                          EKA+  KD TV K GEYKD TAEKA EGKD+AV           DAAKRAMG+                           D+T+E     +EE R+ ++   V+D+ +G  T R  G + VIK E++  GAVA+ LKA+++         G +++EGV  V
Sbjct:   58 KDLEDANRLRDNTFNTWKEQHQHDENKPGVIGSMFRA-------AKEAVVGKPHHEEVYAKETKMGEYSDYATQKARETKQKAGEYTDYAAQKAKETKDYAAEKAKNAKDITVQKAGEYKDY-------TAEKAKNAKDTTVQKAGEYKDYTAEKAIEGKDSAVGKLGELKESAADAAKRAMGFF---------------------TGGNKDQTREE----EEETRRSMQEVRVQDKEYG--TGRGTGEKLVIKMEESRPGAVADALKAANRAMD------GDMEEEGVLHV 302          
BLAST of Ca_19043 vs. TrEMBL
Match: Q9ZTY1_SOYBN (35 kDa seed maturation protein OS=Glycine max GN=pGmPM18 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.337e-15
Identity = 85/299 (28.43%), Postives = 127/299 (42.47%), Query Frame = 1
Query:   25 RHVEELNRTTEHDLNATAS----DEEKRGVIGSVIKTVKDTYEN--------ARESIVGKRDP--ADNSHTTTQVVHVYDHNDGVSTGEVRDISANKSCGIYDSATQKSNXXXXXXXXXXXXXXXXXXXXXXCAVEKAREGKDATVNKLGEYKDCTAEKAKEGKDTAV-----------DAAKRAMGYLGDXXXXXXXXXXXXXXXXXXXXXXXXDKTK---EMLSGGDEEARKKVEGENVKDEVFGGKTWR-RGNEGVIKTEDTPTGAVAEKLKASDQMTGQTFNDVGPLDDEGVTRV 834
            + +E+ NR  ++  N        DE K GVIGS+ +  K+            A+E+ +G+        +  T Q    Y         E +D +A K+    D+  QK+                          EKA+  KD TV K GEYKD TAEKA EGKD+AV           DAAKRAMG+                           D+T+    ++   +EE R+ ++   V+D+ +G  T R  G + VIK E++  GAVA+ LKA+++         G +++EGV  V
Sbjct:   58 KDLEDANRLRDNTFNTWKEQHQHDENKPGVIGSMFRAAKEAVVGKPHHEEVYAKETKMGEYSDYATQKARETKQKAGEYTDYAAQKAKETKDYAAEKAKNAKDTTVQKAGEYKDY------------------TAEKAKNAKDTTVQKAGEYKDYTAEKAIEGKDSAVGKLGELKESAADAAKRAMGFF---------------------TGGNKDQTRLHVTVVQEEEEETRRSMQEVRVQDKEYG--TGRGTGEKLVIKMEESRPGAVADALKAANRAMD------GDMEEEGVLHV 309          
BLAST of Ca_19043 vs. DB:Swiss
Match: LEAD8_DAUCA (Embryonic protein DC-8 OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.030e-15
Identity = 88/251 (35.06%), Postives = 119/251 (47.41%), Query Frame = 1
Query:  241 TGEVRDISANKSCGIYDSATQKSNXXXXXXXXXXXXXXXXXXXXXXCAVEKAREGKDATVNKLGEYKDCTAEKAKEGKD----------------------TAVDAAKRAMG-YLGDXXXXXXXXXXXXXXXXXXXXXXXXDKTKEMLS------GGDEEARKKVEGE--------------------NVKDEVFGGKTW-------RRGNEGVIKTEDTPTGAVAEKLKASDQMTGQTFNDVGPLDDEGV 825
            TGE +D SA K+    D+  +K+ EY DY  +KA E K+         +EKA+E KD TV K GEYKD  AEKAKEGKD                      +A DAA++AM  +LG K+E   +       A ++         K+M        G  +EA+++ E +                    +VKD + G  T        ++  E VIK ++T  GAVAE LKA+DQM GQ FNDVG + DE V
Sbjct:  300 TGEYKDYSAQKAAETKDATMEKTKEYKDYTAQKAAETKD-------ATMEKAKEAKDTTVQKTGEYKDYAAEKAKEGKDVTVEKAKEGKDTTVGKMTELKDSAADAARKAMDMFLGKKEEVKGKAGETAEAAKEKYEDTEFAARKKMEELKLQEEGVKDEAKQRAEADRETAGDRGSAAKGTIFGAMGSVKDAIVGKLTMPSDVVKDKQQQEAVIKVDETRPGAVAEALKAADQMHGQAFNDVGKMGDEEV 543          
BLAST of Ca_19043 vs. DB:Swiss
Match: Y3304_ARATH (Late embryogenesis abundant protein At3g53040 OS=Arabidopsis thaliana OX=3702 GN=At3g53040 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.289e-11
Identity = 76/228 (33.33%), Postives = 94/228 (41.23%), Query Frame = 1
Query:  385 VEKAREGKDATVNKLGEYKDCTAEKAKEG-----------KDTAVDAAKRAMGYLGDXXXXXXXXXXXXXXXXXXXXXXXXDKTKEMLSGGDEEARKKVEGENVK----DEVFGGKTW------------------RRGNEG---VIKTEDTPTGAVAEKL------------------------------------------KASDQMTGQTFNDVGPLDDEGVTRV 834
             +KARE KD T  K+GEY+D TAEKA E            KD+AVD AKRAMG+L           +   E  KQK VE KD  KE +    EEAR+K+E   ++    DE    KT                   +RG EG   ++      TGA+  KL                                          K +DQMTGQTFNDVG +DDE   R+
Sbjct:  256 ADKAREAKDKTAEKVGEYRDYTAEKATETKDAGVSKIGELKDSAVDTAKRAMGFL-----------SGKTEETKQKAVETKDTAKEKMDEAGEEARRKMEEMRLEGKKLDEDASRKTQQSTESAADKAHETKDSVAQRGEEGKGSIMGALGNMTGAIKSKLTGATTPSDEETRASAHGDESTGKTVVAVDVKDTRPGYVATVLKEADQMTGQTFNDVGEIDDEEKVRI 472          

HSP 2 Score: 56.6102 bits (135), Expect = 7.714e-8
Identity = 55/144 (38.19%), Postives = 74/144 (51.39%), Query Frame = 1
Query:   97 GVIGSVIKTVKDTYENARESIVGK-RDPADNSHTTTQVVHVYDHNDGVSTGEVRDISANKSCGIYDSATQKSNXXXXXXXXXXXXXXXXXXXXXXCA---------------VEKAREGKDATVNKLGEYKDCTAEKAKEGKDT 480
            G+IGSV+K V+ T    +++++GK  D A+++     +          +TGEVRD +A K+    D    K+ E  D   +K KE  + A E    A                EKARE KD T +KLGEYKD TAEKAKE KDT
Sbjct:   53 GLIGSVMKAVQGT----KDAVIGKSHDTAESTREGADIASEKAAGMRDTTGEVRDSTAQKTKETADYTADKAREAKDKTADKTKETADYAAEKAREAKDRTADKTKETAEYTAEKAREAKDKTADKLGEYKDYTAEKAKEAKDT 192          
BLAST of Ca_19043 vs. DB:Swiss
Match: ECP63_ARATH (Late embryogenesis abundant protein ECP63 OS=Arabidopsis thaliana OX=3702 GN=ECP63 PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 2.239e-9
Identity = 75/205 (36.59%), Postives = 88/205 (42.93%), Query Frame = 1
Query:  385 VEKAREGKDATVNKLGEYKDCTAEKAK-----------EGKDTAV---DAAKRAMGYLGDXXXXXXXXX----XXXXXXXXXXXXXXXDKTKEMLSGGDEEARK-----KVEGENVKDEVFG-----------------------------GKTWRRGNEGVIKTEDTPTGAVAEKLKASDQMTGQTFNDVGPLDDEGVTRVGLL 843
            VEKA EGKD TV+KLGE KD   E AK           E K  AV   D AK  M   G+   +  E+      E  E A  K  EA  KT+E    G ++A +      V G   K  +FG                             G T R   E  +K ED+  G VA  LKASDQMTGQTFNDVG +DD+     G L
Sbjct:  246 VEKATEGKDVTVSKLGELKDSAVETAKRAMGFLSGKTEEAKGKAVETKDTAKENMEKAGEVTRQKMEEMRLEGKELKEEAGAKAQEASQKTRESTESGAQKAEETKDSAAVRGNEAKGTIFGALGNVTEAIKSKLTMPSDIVEETRAAREHGGTGRTVVE--VKVEDSKPGKVATSLKASDQMTGQTFNDVGRMDDDARKDKGKL 448          

HSP 2 Score: 58.5362 bits (140), Expect = 1.677e-8
Identity = 59/174 (33.91%), Postives = 80/174 (45.98%), Query Frame = 1
Query:   46 RTTEHDLNATASDEEKRGVIGSVIKTVKDTYENARESIVGKRDPADNSHTTTQVVHVYDHNDGVSTGEVRDISANKSCGIYDSATQKSNXXXX---------------XXXXXXXXXXXXXXXXXXCAVEKAREGKDATVNKLGEYKDCTAEKAKEGKDTAVDAAKRAMGYLGD 522
            RTTEH       ++++ GVIGSV + V+ TYE+AR+++VGK                  H    ST E   I++ K+ G  D+  +K+ E AD                A E      EKA E  +   +KA E KD T  K+GEYKD   +KA E KD   + AK    Y  D
Sbjct:   41 RTTEH-----PPEQDRPGVIGSVFRAVQGTYEHARDAVVGKT-----------------HEAAESTKEGAQIASEKAVGAKDATVEKAKETADYTAEKVGEYKDYTVDKAKEAKDTTAEKAKETANYTADKAVEAKDKTAEKIGEYKDYAVDKAVEAKDKTAEKAKETANYTAD 192          
The following BLAST results are available for this feature:
BLAST of Ca_19043 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
LEAD8_DAUCA6.895e-1730.68Embryonic protein DC-8 OS=Daucus carota PE=3 SV=1[more]
back to top
BLAST of Ca_19043 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7I9D0_MEDTR3.738e-6746.69Late embryongenesis abundant protein OS=Medicago t... [more]
Q39871_SOYBN5.651e-2340.46Late embryongenesis abundant protein OS=Glycine ma... [more]
F6HKF4_VITVI1.259e-2234.77Putative uncharacterized protein OS=Vitis vinifera... [more]
I1L957_SOYBN1.392e-2136.96Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
Q2N1E0_PHAVU3.791e-1930.33Group 3 late embryogenesis abundant protein OS=Pha... [more]
M0ZSF3_SOLTU3.923e-1628.08Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
Q9FPW5_PHAVU8.739e-1628.90IAA-protein conjugate OS=Phaseolus vulgaris GN=iap... [more]
I1JPV0_SOYBN1.141e-1529.05Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
C6T9C2_SOYBN1.947e-1529.79Putative uncharacterized protein OS=Glycine max PE... [more]
Q9ZTY1_SOYBN4.337e-1528.4335 kDa seed maturation protein OS=Glycine max GN=p... [more]

Pages

back to top
BLAST of Ca_19043 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
LEAD8_DAUCA1.030e-1535.06Embryonic protein DC-8 OS=Daucus carota OX=4039 PE... [more]
Y3304_ARATH9.289e-1133.33Late embryogenesis abundant protein At3g53040 OS=A... [more]
ECP63_ARATH2.239e-936.59Late embryogenesis abundant protein ECP63 OS=Arabi... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004238Late embryogenesis abundant protein, LEA-3PFAMPF02987LEA_4coord: 94..123
score: 4.1e-05coord: 117..146
score: 1.2e-10coord: 125..168
score: 2.8e-14coord: 174..205
score: 9
NoneNo IPR availablePANTHERPTHR23241FAMILY NOT NAMEDcoord: 15..204
score: 4.5
NoneNo IPR availablePANTHERPTHR23241:SF11LATE EMBRYOGENESIS ABUNDANT (LEA)coord: 15..204
score: 4.5
NoneNo IPR availableSEGsegsegcoord: 105..126
score: NAcoord: 175..198
score
NoneNo IPR availableSEGsegsegcoord: 41..51
score
NoneNo IPR availableCOILcoilcoiled-coilcoord: 33..57
score
NoneNo IPR availableSEGsegsegcoord: 11..24
score: NAcoord: 35..63
score
NoneNo IPR availableSEGsegsegcoord: 63..77
score: NAcoord: 94..112
score: NAcoord: 126..136
score: NAcoord: 167..177
score
NoneNo IPR availableSEGsegsegcoord: 40..62
score
NoneNo IPR availableSEGsegsegcoord: 29..63
score: NAcoord: 64..84
score
NoneNo IPR availableSEGsegsegcoord: 45..61
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_19043_v1.0_kabuli ID=Ca_19043_v1.0_kabuli; Name=Ca_19043; organism=Cicer arietinum; type=mRNA; length=858bp
ATGGCATCGAGGCAACCACCTCCAAGACACGTTGAAGAACTTAACAGAAC
AACAGAGCACGATCTGAATGCCACTGCTTCAGATGAAGAAAAGCGCGGTG
TAATTGGTTCAGTCATAAAAACCGTCAAAGACACCTACGAGAATGCAAGA
GAATCCATAGTTGGCAAAAGAGATCCAGCAGACAATTCCCACACTACAAC
ACAAGTAGTCCATGTTTACGATCACAATGATGGTGTCTCAACTGGTGAAG
TTAGAGACATATCAGCCAACAAATCATGCGGAATCTATGATTCCGCAACT
CAGAAGAGTAATGAGTATGCAGATTATGCGGGAGAGAAAGCGAAAGAAGC
TAAGGAGAAAGCAGGGGAGTATAAAGACTGTGCTGTGGAGAAAGCAAGGG
AAGGGAAAGATGCTACGGTGAATAAGTTGGGTGAGTATAAGGATTGTACA
GCTGAGAAGGCTAAAGAAGGAAAAGACACTGCTGTTGATGCGGCCAAAAG
GGCTATGGGTTACTTGGGTGACAAGAAAGAGGAAACTAAAGAGAAGACTG
CAGAGACTGCTGAAGCAGCTAAACAGAAAACGGTTGAGGCCAAAGATAAG
ACCAAGGAGATGCTGAGTGGAGGAGATGAAGAGGCAAGGAAGAAAGTGGA
AGGGGAAAATGTGAAAGATGAAGTATTTGGAGGGAAAACATGGAGGCGTG
GAAATGAAGGTGTGATAAAAACTGAAGATACTCCAACAGGAGCTGTGGCT
GAAAAGCTGAAAGCTTCTGATCAGATGACGGGTCAGACATTCAATGACGT
GGGACCTTTGGATGATGAAGGGGTCACTCGTGTTGGTCTCCTTGATATTA
AAAAGTGA
back to top

protein sequence of Ca_19043_v1.0_kabuli

>Ca_19043_v1.0_kabuli ID=Ca_19043_v1.0_kabuli; Name=Ca_19043_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=285bp
MASRQPPPRHVEELNRTTEHDLNATASDEEKRGVIGSVIKTVKDTYENAR
ESIVGKRDPADNSHTTTQVVHVYDHNDGVSTGEVRDISANKSCGIYDSAT
QKSNEYADYAGEKAKEAKEKAGEYKDCAVEKAREGKDATVNKLGEYKDCT
AEKAKEGKDTAVDAAKRAMGYLGDKKEETKEKTAETAEAAKQKTVEAKDK
TKEMLSGGDEEARKKVEGENVKDEVFGGKTWRRGNEGVIKTEDTPTGAVA
EKLKASDQMTGQTFNDVGPLDDEGVTRVGLLDIKK
back to top

mRNA from alignment at Ca4:20872920..20873861-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_19043_v1.0_kabuli ID=Ca_19043_v1.0_kabuli; Name=Ca_19043; organism=Cicer arietinum; type=mRNA; length=942bp; location=Sequence derived from: Ca4:20872920..20873861- (Cicer arietinum
ATGGCATCGAGGCAACCACCTCCAAGACACGTTGAAGAACTTAACAGAAC AACAGAGCACGATCTGAATGCCACTGCTTCAGATGAAGAAAAGCGCGGTG TAATTGGTTCAGTCATAAAAACCGTCAAAGACACCTACGAGAATGCAAGA GAATCCATAGTTGGCAAAAGAGATCCAGCAGACAATTCCCACACTACAAC ACAAGTAGTCCATGTTTACGATCACAATGATGGTGTCTCAACTGGTGAAG TTAGAGACATATCAGCCAACAAATCATGCGGAATCTATGATTCCGCAACT CAGAAGAGTAATGAGTATGCAGATTATGCGGGAGAGAAAGCGAAAGAAGC TAAGGAGAAAGCAGGGGAGTATAAAGACTGTGCTGTGGAGAAAGCAAGGG AAGGGAAAGATGCTACGGTGAATAAGTTGGGTGAGTATAAGGATTGTACA GCTGAGAAGGCTAAAGAAGGAAAAGACACTGCTGTTGATGCGGCCAAAAG GGCTATGGGTTACTTGGGTGACAAGAAAGAGGAAACTAAAGAGAAGACTG CAGAGACTGCTGAAGCAGCTAAACAGAAAACGGTTGAGGCCAAAGATAAG ACCAAGGTTCACTACACATGTCTTTTATTTTATTTATCTGTCTCAATTTT CAGTTACATTAATTCAGTGATTGTGGAATGATGGATGCAGGAGATGCTGA GTGGAGGAGATGAAGAGGCAAGGAAGAAAGTGGAAGGGGAAAATGTGAAA GATGAAGTATTTGGAGGGAAAACATGGAGGCGTGGAAATGAAGGTGTGAT AAAAACTGAAGATACTCCAACAGGAGCTGTGGCTGAAAAGCTGAAAGCTT CTGATCAGATGACGGGTCAGACATTCAATGACGTGGGACCTTTGGATGAT GAAGGGGTCACTCGTGTTGGTCTCCTTGATATTAAAAAGTGA
back to top

Coding sequence (CDS) from alignment at Ca4:20872920..20873861-

>Ca_19043_v1.0_kabuli ID=Ca_19043_v1.0_kabuli; Name=Ca_19043; organism=Cicer arietinum; type=CDS; length=858bp; location=Sequence derived from: Ca4:20872920..20873861- (Cicer arietinum
ATGGCATCGAGGCAACCACCTCCAAGACACGTTGAAGAACTTAACAGAAC
AACAGAGCACGATCTGAATGCCACTGCTTCAGATGAAGAAAAGCGCGGTG
TAATTGGTTCAGTCATAAAAACCGTCAAAGACACCTACGAGAATGCAAGA
GAATCCATAGTTGGCAAAAGAGATCCAGCAGACAATTCCCACACTACAAC
ACAAGTAGTCCATGTTTACGATCACAATGATGGTGTCTCAACTGGTGAAG
TTAGAGACATATCAGCCAACAAATCATGCGGAATCTATGATTCCGCAACT
CAGAAGAGTAATGAGTATGCAGATTATGCGGGAGAGAAAGCGAAAGAAGC
TAAGGAGAAAGCAGGGGAGTATAAAGACTGTGCTGTGGAGAAAGCAAGGG
AAGGGAAAGATGCTACGGTGAATAAGTTGGGTGAGTATAAGGATTGTACA
GCTGAGAAGGCTAAAGAAGGAAAAGACACTGCTGTTGATGCGGCCAAAAG
GGCTATGGGTTACTTGGGTGACAAGAAAGAGGAAACTAAAGAGAAGACTG
CAGAGACTGCTGAAGCAGCTAAACAGAAAACGGTTGAGGCCAAAGATAAG
ACCAAGGAGATGCTGAGTGGAGGAGATGAAGAGGCAAGGAAGAAAGTGGA
AGGGGAAAATGTGAAAGATGAAGTATTTGGAGGGAAAACATGGAGGCGTG
GAAATGAAGGTGTGATAAAAACTGAAGATACTCCAACAGGAGCTGTGGCT
GAAAAGCTGAAAGCTTCTGATCAGATGACGGGTCAGACATTCAATGACGT
GGGACCTTTGGATGATGAAGGGGTCACTCGTGTTGGTCTCCTTGATATTA
AAAAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR004238ECP63-like_dom