Ca_23898, Ca_23898_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_23898
Unique NameCa_23898_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length405
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca4chromosomeCa4:40842152..40842556 -Cicer arietinum CDC Frontier genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum CDC Frontier genome v1.02013-01-01
InterProScan analysis for kabuli C. arietinum unigenes2013-10-24
Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL2013-10-24
BLAST: C. arietinum CDC Frontier (kabuli), Swissprot2019-05-21
Expression: Chickpea drought stress response 2023-09-13
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR331Pisum sativum Cameor genome v1aPisum sativum
cavuR340Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR347Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR301Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR417Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ancaL0092Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0326Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0376Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0749Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0750Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL733Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL738Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL741Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR266Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR297Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR286Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR292Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR284Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR289Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR304Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR315Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR320Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR328Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR357Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR371Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR316Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR332Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR131Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR142Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL538Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL734Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL736Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL739Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL746Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR288Cicer arietinum
cacarR327Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.3g198000.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.3g163240.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat06G0095200-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-XM_014648470.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
LR48_mrnaVigan07g209100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Psat6g033720.1Pisum sativum Cameor genome v1aPisum sativum
Va07G051500.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg35911.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004498487.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_23898-CDS1Ca_23898-CDS1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_23898_v1.0_kabuliCa_23898_v1.0_kabuliCicer arietinumpolypeptide


Homology
BLAST of Ca_23898 vs. TrEMBL
Match: G7I4F2_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_1g008680 PE=4 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.630e-24
Identity = 56/61 (91.80%), Postives = 59/61 (96.72%), Query Frame = 1
Query:  130 QKRKEKKTQETDIIHIDEHKKGKETIVPGPFGQQAVVITVEDDVHVDETKKTDKLGSGLHA 312
            QKRKEKKTQETDIIHIDEHKKGKETIVPGPFGQQAVVI+VEDDVHVDE+KK+ KLG GLHA
Sbjct:   38 QKRKEKKTQETDIIHIDEHKKGKETIVPGPFGQQAVVISVEDDVHVDESKKSKKLGHGLHA 98          

HSP 2 Score: 105.916 bits (263), Expect = 4.909e-21
Identity = 54/80 (67.50%), Postives = 58/80 (72.50%), Query Frame = 1
Query:  166 IIHIDEHKKGKETIVPGPFGQQAVVITVEDDVHVDETKKTDKLGSGLHAKXXXXXXXXXXXXXQEAGASPG-HHQLENKS 402
            IIHIDEHKKG ETI PGPFGQQAV I+VEDDVHVDE+KK++KLG GLHAK              E G S G HHQLENKS
Sbjct:  164 IIHIDEHKKGMETIAPGPFGQQAVAISVEDDVHVDESKKSEKLGHGLHAKSSSAEANHHNSNSLEVGTSHGHHHQLENKS 243          

HSP 3 Score: 93.9745 bits (232), Expect = 1.930e-17
Identity = 44/49 (89.80%), Postives = 47/49 (95.92%), Query Frame = 1
Query:  166 IIHIDEHKKGKETIVPGPFGQQAVVITVEDDVHVDETKKTDKLGSGLHA 312
            IIHIDEHKKGKETIVPGPFGQQAVVI+VEDDVHVDE+KK+ KLG GLHA
Sbjct:  107 IIHIDEHKKGKETIVPGPFGQQAVVISVEDDVHVDESKKSKKLGHGLHA 155          
BLAST of Ca_23898 vs. TrEMBL
Match: G7I4E5_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_1g008620 PE=4 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 4.909e-21
Identity = 52/62 (83.87%), Postives = 56/62 (90.32%), Query Frame = 1
Query:  130 QKRKEKKTQETDIIHIDEHKKGKETIVPGPFGQQAVVITVEDDVHVDETKKTDKLGSGLHAK 315
            QKRKE  TQETDIIHIDEHKKGKETIVPGPFGQQAVVI+VEDDVHVDET+K +K   GLHA+
Sbjct:   34 QKRKES-TQETDIIHIDEHKKGKETIVPGPFGQQAVVISVEDDVHVDETRKKEKFDHGLHAQ 94          

HSP 2 Score: 104.76 bits (260), Expect = 1.094e-20
Identity = 53/79 (67.09%), Postives = 59/79 (74.68%), Query Frame = 1
Query:  169 IHIDEHKKGKETIVPGPFGQQAVVITVEDDVHVDETKKTDKLGSGLHAKXXXXXXXXXXXXXQEAGASPG-HHQLENKS 402
            IHIDEHKKGKETI PGPFGQQAV I+VEDDVHVDE+KK++KLG GL+AK              + GAS G HHQLENKS
Sbjct:  100 IHIDEHKKGKETIAPGPFGQQAVAISVEDDVHVDESKKSEKLGHGLYAKSSSAEANHHNSNSLDVGASHGHHHQLENKS 178          
BLAST of Ca_23898 vs. TrEMBL
Match: I1MAE8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 8.665e-18
Identity = 41/61 (67.21%), Postives = 53/61 (86.89%), Query Frame = 1
Query:  133 KRKEKKTQETDIIHIDEHKKGKETIVPGPFGQQAVVITVEDDVHVDETKKTDKLGSGLHAK 315
            +R++KKTQET+++H DEH+  KETIVPGPFG+  VV+TVEDDVH+DE  KT+K+G GLHAK
Sbjct:  144 QRRKKKTQETEVLHFDEHQTVKETIVPGPFGRNTVVVTVEDDVHIDEEIKTEKVGHGLHAK 204          
BLAST of Ca_23898 vs. TrEMBL
Match: I1MAE9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 4.300e-17
Identity = 52/100 (52.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query:  133 KRKEKKTQETDIIHIDEHKKGKETIVPGPFGQQAVVITVEDDVHVDE--TKKTDKLGSGLHAK-XXXXXXXXXXXXXQEAGASP--------GHHQLENK 399
            +R++KKTQET++IH DEHK  KETIVPGPFG+  VV+TVEDDVH+DE   KK +K G GLHAK               E  A+P         HHQ ENK
Sbjct:  144 QRRKKKTQETEVIHFDEHKTVKETIVPGPFGRNTVVVTVEDDVHIDEEIKKKNEKGGHGLHAKSSSPEADQGTSSSIVEVAATPPPPENHDDHHHQPENK 243          
BLAST of Ca_23898 vs. TrEMBL
Match: M5VIZ2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb021634mg PE=4 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.920e-13
Identity = 39/64 (60.94%), Postives = 51/64 (79.69%), Query Frame = 1
Query:  130 QKRKEKKTQETDIIHIDEHKKGKETIVPGPFGQQAVVITVEDDVHVD-ETKKTDKLG-SGLHAK 315
            ++RK+K  QETDIIHID+H+K KE IV GP+G QAVV++VEDDVH+D E +K + +G  GLH K
Sbjct:  120 KRRKKKTIQETDIIHIDKHRKIKEKIVEGPYGPQAVVLSVEDDVHIDEEIRKNETIGHKGLHGK 183          

HSP 2 Score: 72.4034 bits (176), Expect = 6.015e-11
Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 1
Query:  157 ETDIIHIDEHKKGKETIVPGPFGQQAVVITVEDDVHVDE-TKKTDKLGSGLHA 312
            ET+II+ DEHKK KE IV GP+G +AVV+T+EDDVH+DE  +K +++G GLHA
Sbjct:  192 ETEIINFDEHKKVKEDIVGGPYGSKAVVLTIEDDVHMDEVVRKNERVGKGLHA 244          
BLAST of Ca_23898 vs. TrEMBL
Match: F6H0A1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g15510 PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 5.440e-12
Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 1
Query:  130 QKRKEKKTQETDIIHIDEHKKGKETIVPGPFGQQAVVITVEDDVHV-DETKKTDKLGSG-LHAK 315
            +KRK+K  QETDII +DEH   KE IVPGP G+QAVV+ V+DDVH+ +E +K +K G G LH K
Sbjct:   98 KKRKKKMVQETDIIKVDEHLTVKEAIVPGPHGEQAVVLFVDDDVHIQEEIRKNEKFGQGHLHGK 161          

HSP 2 Score: 70.8626 bits (172), Expect = 1.750e-10
Identity = 31/59 (52.54%), Postives = 44/59 (74.58%), Query Frame = 1
Query:  142 EKKTQETDIIHIDEHKKGKETIVPGPFGQQAVVITVEDDVHV-DETKKTDKLGSGLHAK 315
            +K  QET+II +DEH K KE ++ GP G+Q V++T EDDVH+ +E +K +K+G GLH K
Sbjct:  245 KKMVQETEIIDVDEHSKVKEGVIAGPHGEQVVLLTEEDDVHIQEEIRKNEKIGEGLHGK 303          

HSP 3 Score: 65.0846 bits (157), Expect = 9.603e-9
Identity = 28/61 (45.90%), Postives = 44/61 (72.13%), Query Frame = 1
Query:  136 RKEKKTQETDIIHIDEHKKGKETIVPGPFGQQAVVITVEDDVHV-DETKKTDKLGSGLHAK 315
            +K+   QET+++++DEH K KE ++ GP G QA+ + +EDD H+ +E +K +KLG GLH K
Sbjct:  172 KKKNMVQETEMVNVDEHLKVKEAMLAGPHGAQALALCMEDDKHIHEEIQKNEKLGEGLHGK 232          
BLAST of Ca_23898 vs. TrEMBL
Match: F6H0A0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g15470 PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 5.440e-12
Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 1
Query:  130 QKRKEKKTQETDIIHIDEHKKGKETIVPGPFGQQAVVITVEDDVHV-DETKKTDKLGSG-LHAK 315
            +KRK+K  QETDII +DEH   KE IVPGP G+QAVV+ V+DDVH+ +E +K +K G G LH K
Sbjct:  147 KKRKKKMVQETDIIKVDEHLTVKEAIVPGPHGEQAVVLFVDDDVHIQEEIRKNEKFGQGHLHGK 210          

HSP 2 Score: 71.633 bits (174), Expect = 1.026e-10
Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 1
Query:  145 KKTQETDIIHIDEHKKGKETIVPGPFGQQAVVITVEDDVHV-DETKKTDKLGSGLHAK 315
            K  QET+II +DEH K KE ++ GP G+Q V++T EDDVH+ +E +K +K+G GLH K
Sbjct:  435 KMVQETEIIDVDEHSKAKEGVIAGPHGEQVVLLTEEDDVHIQEEIRKNEKIGEGLHGK 492          

HSP 3 Score: 66.6254 bits (161), Expect = 3.300e-9
Identity = 29/61 (47.54%), Postives = 44/61 (72.13%), Query Frame = 1
Query:  136 RKEKKTQETDIIHIDEHKKGKETIVPGPFGQQAVVITVEDDVHV-DETKKTDKLGSGLHAK 315
            +K+   QET+++++DEH K KE ++ GP G QA+ + +EDD H+ +E KK +KLG GLH K
Sbjct:  221 KKKNMVQETEMVNVDEHLKVKEAMLAGPHGAQALALCMEDDKHIHEEIKKNEKLGEGLHGK 281          

HSP 4 Score: 59.3066 bits (142), Expect = 5.269e-7
Identity = 29/59 (49.15%), Postives = 41/59 (69.49%), Query Frame = 1
Query:  142 EKKTQETDIIHIDEHKKGKETIVPGPFGQQAVVITVEDDVHV-DETKKTDKLGSGLHAK 315
            +K  QET+II +DEH K KE ++  P G QA+ + +EDD H+ +E +K +KLG GLH K
Sbjct:  294 KKMVQETEIIDVDEHSKVKEAML-APHGAQALALCMEDDKHIHEEIQKNEKLGEGLHGK 351          

HSP 5 Score: 59.3066 bits (142), Expect = 5.269e-7
Identity = 29/59 (49.15%), Postives = 41/59 (69.49%), Query Frame = 1
Query:  142 EKKTQETDIIHIDEHKKGKETIVPGPFGQQAVVITVEDDVHV-DETKKTDKLGSGLHAK 315
            +K  QET+II +DEH K KE ++  P G QA+ + +EDD H+ +E +K +KLG GLH K
Sbjct:  364 KKMVQETEIIDVDEHSKVKEAML-APHGAQALALCMEDDKHIHEEIQKNEKLGEGLHGK 421          
BLAST of Ca_23898 vs. TrEMBL
Match: B9GTM7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_754489 PE=4 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 9.279e-12
Identity = 39/93 (41.94%), Postives = 57/93 (61.29%), Query Frame = 1
Query:  130 QKRKEKKTQETDIIHIDEHKKGKETIVPGPFGQQAVVITVEDDVHV-DETKKTDKLGSGLHAK-XXXXXXXXXXXXXQEAGASPGHHQLENKS 402
            +K+K+K  +ETDI+H+ EH K KE IV GP G +AVV+ + DDVH+ +E K+ +K+G GLHAK                +  S  H +LE+K+
Sbjct:   81 KKKKKKTVEETDIVHVHEHLKVKEAIVEGPHGPKAVVLEIVDDVHIGEEIKEEEKVGEGLHAKAIEGNAGTVDQLAAPSSSGSNNHSRLEHKA 173          
BLAST of Ca_23898 vs. TrEMBL
Match: B9SJJ3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0138540 PE=4 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.212e-11
Identity = 40/93 (43.01%), Postives = 55/93 (59.14%), Query Frame = 1
Query:  133 KRKEKKTQETDIIHIDEHKKGKETIVPGPFGQQAVVITVEDDVHVDET---KKTDKLGSGLHAKXXXXXXXXXXXXXQEAGASPGHHQLENKS 402
            K+++K+ QETD+I +DEH K KE IV GP G Q+VV+ +EDDVHV+E    +K +  G GLH                 + AS  H QL+NK+
Sbjct:   76 KKRKKRVQETDVIQVDEHLKVKEAIVEGPNGPQSVVLQIEDDVHVNEVIKKQKEENFGDGLH---NAKNKSLEIGALPSSSASSTHSQLQNKA 165          
BLAST of Ca_23898 vs. TrEMBL
Match: A5ANC6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033269 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.026e-10
Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 1
Query:  145 KKTQETDIIHIDEHKKGKETIVPGPFGQQAVVITVEDDVHV-DETKKTDKLGSGLHAK 315
            K  QET+II +DEH K KE ++ GP G+Q V++T EDDVH+ +E +K +K+G GLH K
Sbjct:  213 KMVQETEIIDVDEHSKAKEGVIAGPHGEQVVLLTEEDDVHIQEEIRKNEKIGEGLHGK 270          

HSP 2 Score: 67.781 bits (164), Expect = 1.481e-9
Identity = 34/56 (60.71%), Postives = 42/56 (75.00%), Query Frame = 1
Query:  154 QETDIIHIDEHKKGKETIVPGPFGQQAVVITVEDDVHV-DETKKTDKLGSG-LHAK 315
            QETDII +DEH   KE IVPGP G+QAVV+ V+DDVH+ +E +K +K G G LH K
Sbjct:    3 QETDIIKVDEHLTVKEAIVPGPHGEQAVVLFVDDDVHIQEEIRKNEKFGQGHLHGK 58          

HSP 3 Score: 65.0846 bits (157), Expect = 9.603e-9
Identity = 28/61 (45.90%), Postives = 44/61 (72.13%), Query Frame = 1
Query:  136 RKEKKTQETDIIHIDEHKKGKETIVPGPFGQQAVVITVEDDVHV-DETKKTDKLGSGLHAK 315
            +K+   QET+++++DEH K KE ++ GP G QA+ + +EDD H+ +E +K +KLG GLH K
Sbjct:   69 KKKNMVQETEMVNVDEHLKVKEAMLAGPHGAQALALCMEDDKHIHEEIQKNEKLGEGLHGK 129          

HSP 4 Score: 59.3066 bits (142), Expect = 5.269e-7
Identity = 29/59 (49.15%), Postives = 41/59 (69.49%), Query Frame = 1
Query:  142 EKKTQETDIIHIDEHKKGKETIVPGPFGQQAVVITVEDDVHV-DETKKTDKLGSGLHAK 315
            +K  QET+II +DEH K KE ++  P G QA+ + +EDD H+ +E +K +KLG GLH K
Sbjct:  142 KKMVQETEIIDVDEHSKVKEAML-APHGAQALALCMEDDKHIHEEIQKNEKLGEGLHGK 199          
The following BLAST results are available for this feature:
BLAST of Ca_23898 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 16
Match NameE-valueIdentityDescription
G7I4F2_MEDTR1.630e-2491.80Putative uncharacterized protein OS=Medicago trunc... [more]
G7I4E5_MEDTR4.909e-2183.87Putative uncharacterized protein OS=Medicago trunc... [more]
I1MAE8_SOYBN8.665e-1867.21Uncharacterized protein OS=Glycine max PE=4 SV=2[more]
I1MAE9_SOYBN4.300e-1752.00Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
M5VIZ2_PRUPE4.920e-1360.94Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
F6H0A1_VITVI5.440e-1259.38Putative uncharacterized protein OS=Vitis vinifera... [more]
F6H0A0_VITVI5.440e-1259.38Putative uncharacterized protein OS=Vitis vinifera... [more]
B9GTM7_POPTR9.279e-1241.94Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9SJJ3_RICCO1.212e-1143.01Putative uncharacterized protein OS=Ricinus commun... [more]
A5ANC6_VITVI1.026e-1053.45Putative uncharacterized protein OS=Vitis vinifera... [more]

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BLAST of Ca_23898 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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Expression

Available Analyses

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Download expression dataset for this feature
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 6..16
score: NAcoord: 20..43
score: NAcoord: 106..118
score
NoneNo IPR availableSEGsegsegcoord: 40..49
score
NoneNo IPR availableSEGsegsegcoord: 50..58
score
NoneNo IPR availableSEGsegsegcoord: 15..34
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_23898_v1.0_kabuli ID=Ca_23898_v1.0_kabuli; Name=Ca_23898; organism=Cicer arietinum; type=mRNA; length=405bp
ATGGCCTCAACTCAATCCAGCAACTCTCCCTCTCCAAACAACCCCCCCAT
AGTCATAGTAGTTTTATTCATCTTCTCCGGGGGACTTGTCTTGCTTTCTT
TGCTGACTTTTGTTCTATTCTGCTTCTTTCAGAAGAGGAAGGAGAAGAAG
ACACAAGAAACCGATATCATCCATATCGATGAGCATAAAAAGGGCAAGGA
AACCATTGTGCCTGGTCCTTTTGGACAACAGGCAGTAGTTATAACAGTTG
AAGATGATGTGCATGTAGATGAAACAAAGAAAACTGATAAACTTGGTAGT
GGTTTACATGCCAAATCATCCTCAGCTGAAGCAAATCATCACAATTCTAG
TAGCCAAGAGGCAGGAGCTTCTCCTGGTCATCACCAGCTTGAGAACAAGT
CATAA
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protein sequence of Ca_23898_v1.0_kabuli

>Ca_23898_v1.0_kabuli ID=Ca_23898_v1.0_kabuli; Name=Ca_23898_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=134bp
MASTQSSNSPSPNNPPIVIVVLFIFSGGLVLLSLLTFVLFCFFQKRKEKK
TQETDIIHIDEHKKGKETIVPGPFGQQAVVITVEDDVHVDETKKTDKLGS
GLHAKSSSAEANHHNSSSQEAGASPGHHQLENKS
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mRNA from alignment at Ca4:40842152..40842556-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_23898_v1.0_kabuli ID=Ca_23898_v1.0_kabuli; Name=Ca_23898; organism=Cicer arietinum; type=mRNA; length=405bp; location=Sequence derived from: Ca4:40842152..40842556- (Cicer arietinum
ATGGCCTCAACTCAATCCAGCAACTCTCCCTCTCCAAACAACCCCCCCAT AGTCATAGTAGTTTTATTCATCTTCTCCGGGGGACTTGTCTTGCTTTCTT TGCTGACTTTTGTTCTATTCTGCTTCTTTCAGAAGAGGAAGGAGAAGAAG ACACAAGAAACCGATATCATCCATATCGATGAGCATAAAAAGGGCAAGGA AACCATTGTGCCTGGTCCTTTTGGACAACAGGCAGTAGTTATAACAGTTG AAGATGATGTGCATGTAGATGAAACAAAGAAAACTGATAAACTTGGTAGT GGTTTACATGCCAAATCATCCTCAGCTGAAGCAAATCATCACAATTCTAG TAGCCAAGAGGCAGGAGCTTCTCCTGGTCATCACCAGCTTGAGAACAAGT CATAA
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Coding sequence (CDS) from alignment at Ca4:40842152..40842556-

>Ca_23898_v1.0_kabuli ID=Ca_23898_v1.0_kabuli; Name=Ca_23898; organism=Cicer arietinum; type=CDS; length=405bp; location=Sequence derived from: Ca4:40842152..40842556- (Cicer arietinum
ATGGCCTCAACTCAATCCAGCAACTCTCCCTCTCCAAACAACCCCCCCAT
AGTCATAGTAGTTTTATTCATCTTCTCCGGGGGACTTGTCTTGCTTTCTT
TGCTGACTTTTGTTCTATTCTGCTTCTTTCAGAAGAGGAAGGAGAAGAAG
ACACAAGAAACCGATATCATCCATATCGATGAGCATAAAAAGGGCAAGGA
AACCATTGTGCCTGGTCCTTTTGGACAACAGGCAGTAGTTATAACAGTTG
AAGATGATGTGCATGTAGATGAAACAAAGAAAACTGATAAACTTGGTAGT
GGTTTACATGCCAAATCATCCTCAGCTGAAGCAAATCATCACAATTCTAG
TAGCCAAGAGGCAGGAGCTTCTCCTGGTCATCACCAGCTTGAGAACAAGT
CATAA
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