Ca_01475, Ca_01475_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_01475
Unique NameCa_01475_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length666
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca5chromosomeCa5:37436290..37436955 -Cicer arietinum CDC Frontier genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum CDC Frontier genome v1.02013-01-01
InterProScan analysis for kabuli C. arietinum unigenes2013-10-24
Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL2013-10-24
BLAST: C. arietinum CDC Frontier (kabuli), Swissprot2019-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR371Pisum sativum Cameor genome v1aPisum sativum
capsR381Pisum sativum Cameor genome v1aPisum sativum
capsR402Pisum sativum Cameor genome v1aPisum sativum
cavuR390Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR412Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR446Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR476Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR514Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0644Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0189Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0333Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0343Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0386Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0397Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0644Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0770Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1213Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL571Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL757Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR337Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR353Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR373Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR400Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR375Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR402Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR425Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR440Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR472Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR371Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR402Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR415Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR169Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR189Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL563Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL766Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR362Cicer arietinum
cacarR393Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
evm.model.Chr03.3065Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_014646026.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg54780.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
LR48_mrnaVigan04g196400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigun09g181200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-TanjilR_28463Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Hedin2.R1.2g160440.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Phvul.009G035900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
LR48_mrnaVigan07g121200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Psat5g049360.1Pisum sativum Cameor genome v1aPisum sativum
Va07G030040.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Psat05G0160900-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-TanjilR_17728Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.model.Chr09.1880Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun03g229400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.model.Chr08.1727Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.2g129520.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun08g109500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-KK1_031107Cajanus cajan Asha genome v1.0Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004501602.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_01475-CDS1Ca_01475-CDS1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_01475_v1.0_kabuliCa_01475_v1.0_kabuliCicer arietinumpolypeptide


Homology
BLAST of Ca_01475 vs. TrEMBL
Match: G7J4K7_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g100100 PE=4 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.438e-50
Identity = 118/217 (54.38%), Postives = 126/217 (58.06%), Query Frame = 1
Query:    1 MDPKEKQAMYRDXXXXXXXXXXXXXXXXXXXXXPQKLLAKLRLRNRTGVKAKRHFVRGAQLLAQARSSKNKSRXXXXXXXXXXXXXXXXXXXXDPKDAASYLLKAMVLDLQGFRTXXXXXXXXXXXXXXXXXXXEGERGDALYKRAELKLATSERGRVDSALKDLTESVILSPKNAKAWSALGECXXXXXXXXXXXXXXXXXXXXXPHFSVPLEALN 651
            M+  EKQAMYRD                     PQK LAKLR +NR  +KAKRHFVRGAQLL QARSSKNKSR                    DPKDAASYLLKAM+LDLQGFRT                   +GERGDAL+KRAELKLATSERGRVDSAL DLTESVILSPKNAKAW ALGEC                     P +SVP+EALN
Sbjct:    1 MEITEKQAMYRDIGLQVIMILAMALIFLSMHGIPQKFLAKLRFQNRKAIKAKRHFVRGAQLLTQARSSKNKSRSAINNLANEALGEAEKAIELDPKDAASYLLKAMILDLQGFRTSALESLDAALSPLAAGSLEQGERGDALFKRAELKLATSERGRVDSALADLTESVILSPKNAKAWCALGECYEGKKMDEEAKKAYKEAHELAPQYSVPVEALN 217          
BLAST of Ca_01475 vs. TrEMBL
Match: I3SDC7_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 3.204e-50
Identity = 117/217 (53.92%), Postives = 126/217 (58.06%), Query Frame = 1
Query:    1 MDPKEKQAMYRDXXXXXXXXXXXXXXXXXXXXXPQKLLAKLRLRNRTGVKAKRHFVRGAQLLAQARSSKNKSRXXXXXXXXXXXXXXXXXXXXDPKDAASYLLKAMVLDLQGFRTXXXXXXXXXXXXXXXXXXXEGERGDALYKRAELKLATSERGRVDSALKDLTESVILSPKNAKAWSALGECXXXXXXXXXXXXXXXXXXXXXPHFSVPLEALN 651
            M+  EKQAMYRD                     PQK LAKLR +NR  +KAKRHFVRGAQLL QARSSKNKSR                    DPKDAASYLLKAM+LDLQGFRT                   +GERGDAL+KRAELKLATSERGRVDSAL DLTESVILSPKNAKAW ALG+C                     P +SVP+EALN
Sbjct:    1 MEITEKQAMYRDIGLQVIMILAMALIFLSMHGIPQKFLAKLRFQNRKAIKAKRHFVRGAQLLTQARSSKNKSRSAINNLANEALGEAEKAIELDPKDAASYLLKAMILDLQGFRTSALESLDAALSPLAAGSLEQGERGDALFKRAELKLATSERGRVDSALADLTESVILSPKNAKAWCALGDCYEGKKMDEEAKKAYKEAHELAPQYSVPVEALN 217          
BLAST of Ca_01475 vs. TrEMBL
Match: I1JV82_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.223e-33
Identity = 102/223 (45.74%), Postives = 113/223 (50.67%), Query Frame = 1
Query:    1 MDPKEKQAMYRDXXXXXXXXXXXXXXXXXXXXXPQKLLAKLRLR--NRTGVKAKRHFVRGAQLLAQARSSKNKSRXXXXXXXXXXXXXXXXXXXXDPKDAASYLLKAMVLDLQGFRTXXXXXXXXXXXXXXXXXXXEGERGDALYKRAELKLATSERGRVDSALKDLTESVILSPKNAKAWSALGECXXXXXXXXXXXXXXXXXXXXXPHFSVPLEALNRLSS 663
            M+  EK+AM RD                     PQ L AKLR R  N   V+AKRHFV+GAQLLAQAR SK+ S                     DPKDAAS+LLK+M LDLQGFRT                   E ERGDAL KRAELK+A SER RVDS L DLTESV LSP+NAKAW  LGEC                     P  +V  EAL+RL S
Sbjct:    1 MEADEKKAMIRDVALQVVFISLTIFSFLWMHGLPQNLYAKLRHRPPNSRAVQAKRHFVQGAQLLAQARRSKSASAATSLAKQALAEAEKALAL--DPKDAASHLLKSMALDLQGFRTNALDALDAALSPLAAGSLAEEERGDALLKRAELKIAMSER-RVDSVLADLTESVKLSPRNAKAWCMLGECYEGNKMGEEAKKAYKEALELEPQSNVAQEALSRLGS 220          
BLAST of Ca_01475 vs. TrEMBL
Match: I1K9S1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 7.927e-33
Identity = 100/223 (44.84%), Postives = 111/223 (49.78%), Query Frame = 1
Query:    1 MDPKEKQAMYRDXXXXXXXXXXXXXXXXXXXXXPQKLLAKLRLR--NRTGVKAKRHFVRGAQLLAQARSSKNKSRXXXXXXXXXXXXXXXXXXXXDPKDAASYLLKAMVLDLQGFRTXXXXXXXXXXXXXXXXXXXEGERGDALYKRAELKLATSERGRVDSALKDLTESVILSPKNAKAWSALGECXXXXXXXXXXXXXXXXXXXXXPHFSVPLEALNRLSS 663
            M+  EK+AM RD                     PQ L AKLR R  N   V+AKRHFV+GAQLLAQAR SK+ S                     DPKDAAS+LLK+M LDLQGFRT                   E ERGDAL KRAELK+A SER  VDS L DLTESV LSP+NAKAW  LGE                      P  +V  EAL+RL S
Sbjct:    1 MEFDEKKAMIRDVALQVVFISLTIFSFLWMHGIPQNLYAKLRHRPPNPRAVQAKRHFVKGAQLLAQARRSKSASSATSLAKQALAEAEKAIAL--DPKDAASHLLKSMALDLQGFRTNALDALDAALSPLAAGSLAEDERGDALLKRAELKIAMSERRGVDSVLADLTESVKLSPRNAKAWCMLGETYEGNKMGEEAKKAYKEALELEPQLNVAQEALSRLGS 221          
BLAST of Ca_01475 vs. TrEMBL
Match: I1MB11_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 5.138e-32
Identity = 87/188 (46.28%), Postives = 104/188 (55.32%), Query Frame = 1
Query:  100 PQKLLAKLRLRNRTGVKAKRHFVRGAQLLAQARSSKNKSRXXXXXXXXXXXXXXXXXXXXDPKDAASYLLKAMVLDLQGFRTXXXXXXXXXXXXXXXXXXXEGERGDALYKRAELKLATSERGRVDSALKDLTESVILSPKNAKAWSALGECXXXXXXXXXXXXXXXXXXXXXPHFSVPLEALNRLSS 663
            P+KL AKLRL NR  ++AKRHFV+GAQLLA+AR+SK+K+                     DP DAA +LLKA+ LD  G R+                   + ERGDAL KRAEL+L TS+RGRVDSAL DLTESV LSP NAKA+ ALG+C                     P F    +ALNRL S
Sbjct:   35 PKKLWAKLRLSNRADIQAKRHFVQGAQLLARARASKSKA------LAKEAQAQAQRAIALDPSDAAPHLLKALALDFLGLRSAALDSLDEALSPAAAKSLSDSERGDALLKRAELRLGTSQRGRVDSALADLTESVRLSPNNAKAFFALGDCYERKKMNDDAIRAYGTALELEPQFHAAEQALNRLDS 216          
BLAST of Ca_01475 vs. TrEMBL
Match: B9GN96_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_798828 PE=4 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 4.071e-29
Identity = 76/152 (50.00%), Postives = 93/152 (61.18%), Query Frame = 1
Query:  100 PQKLLAKLRLRNRTGVKAKRHFVRGAQLLAQARSSKNKSRXXXXXXXXXXXXXXXXXXXXDPKDAASYLLKAMVLDLQGFRTXXXXXXXXXXXXXXXXXXXEGERGDALYKRAELKLATSERGRVDSALKDLTESVILSPKNAKAWSALGEC 555
            PQK L+KLR RNRT ++AKRHFV GAQL+AQARS  N SR                    DPKDAAS++LKA+ LDLQGFRT                     E+GDAL+KRAEL +  + RGRV+ A++DLTE+V L+  NAKA+  LGEC
Sbjct:    5 PQKFLSKLRYRNRTDLQAKRHFVLGAQLIAQARSPSN-SRSTATSLAKQAEDEANKAISLDPKDAASHILKALSLDLQGFRTSALESINVALSPLAVKSLSASEKGDALFKRAELAMGMNRRGRVEPAIQDLTEAVKLNKDNAKAFCLLGEC 155          
BLAST of Ca_01475 vs. TrEMBL
Match: M1AJJ6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG401009338 PE=4 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.185e-28
Identity = 76/188 (40.43%), Postives = 102/188 (54.26%), Query Frame = 1
Query:  100 PQKLLAKLRLRNRTGVKAKRHFVRGAQLLAQARSSKNKSRXXXXXXXXXXXXXXXXXXXXDPKDAASYLLKAMVLDLQGFRTXXXXXXXXXXXXXXXXXXXEGERGDALYKRAELKLATSERGRVDSALKDLTESVILSPKNAKAWSALGECXXXXXXXXXXXXXXXXXXXXXPHFSVPLEALNRLSS 663
            PQK  +KLR RNR  +++KRHFV+GAQLL+QA+S+  K R                    DPKDAA+++LKA+ LDLQGF+T                   E ER DAL+KRA+L+LA S R ++DS + DLT+SV L   N KA+  LG+C                     P+F+   EAL+RL+S
Sbjct:   34 PQKYFSKLRFRNRADMQSKRHFVQGAQLLSQAKSAAVKDRSNAISLAKSAEAQADLAIALDPKDAAAHILKALALDLQGFKTSALDSIDVALSPLAVKSLSEPERADALFKRAQLRLAASRREQIDSVIGDLTQSVRLKGDNVKAFCLLGDCYEKKGLKEEAQKAYQEAQKVQPNFAPAREALDRLNS 221          
BLAST of Ca_01475 vs. TrEMBL
Match: K4BU85_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc04g076470.1 PE=4 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.448e-26
Identity = 74/188 (39.36%), Postives = 102/188 (54.26%), Query Frame = 1
Query:  100 PQKLLAKLRLRNRTGVKAKRHFVRGAQLLAQARSSKNKSRXXXXXXXXXXXXXXXXXXXXDPKDAASYLLKAMVLDLQGFRTXXXXXXXXXXXXXXXXXXXEGERGDALYKRAELKLATSERGRVDSALKDLTESVILSPKNAKAWSALGECXXXXXXXXXXXXXXXXXXXXXPHFSVPLEALNRLSS 663
            PQK  +KLRLRNR  +++KRHFV+GAQLL+QA+S+  K R                    DPKDAA+++LKA+ LDLQGF+T                   E E+ DAL+KRA+L+LA  +   VDS ++DL++SV L   N KA+  LG+C                     P+F+   EAL+RL+S
Sbjct:   34 PQKYFSKLRLRNRADMQSKRHFVQGAQLLSQAKSAAAKDRSKSTSLAKSAEAQADLAIALDPKDAAAHILKALALDLQGFKTSALDSIDVALSPLAVKSLSEPEKADALFKRAQLRLAAEQ---VDSVIEDLSQSVRLKGDNVKAFCLLGDCYEKKGLKEEARKAYQEAQKVQPNFAPAREALDRLNS 218          
BLAST of Ca_01475 vs. TrEMBL
Match: F6HRZ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s1291g00020 PE=4 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 6.084e-25
Identity = 75/188 (39.89%), Postives = 98/188 (52.13%), Query Frame = 1
Query:  100 PQKLLAKLRLRNRTGVKAKRHFVRGAQLLAQARSSKNKSRXXXXXXXXXXXXXXXXXXXXDPKDAASYLLKAMVLDLQGFRTXXXXXXXXXXXXXXXXXXXEGERGDALYKRAELKLATSERGRVDSALKDLTESVILSPKNAKAWSALGECXXXXXXXXXXXXXXXXXXXXXPHFSVPLEALNRLSS 663
            P++ LAKLRL+NR  V+A RHFV+GAQLLA+ARS++   R                    DPKDA + +LKA+ LDLQG ++                   + ERGDAL+KRAEL++A + R RVDSA+ DL E+V LS  N KA+  LGEC                     P      +AL RL+S
Sbjct:   26 PKQALAKLRLKNRATVQANRHFVQGAQLLARARSAQK--RATSLTLAQGAVAEANKALNLDPKDAGAQILKALALDLQGHKSSALRSLDAALSPPAVKSLSDRERGDALFKRAELRVAINRRRRVDSAVADLVEAVRLSEDNCKAFCLLGECYEHKGMKDEARKAFLQALRIEPTSDAARQALERLAS 211          
BLAST of Ca_01475 vs. TrEMBL
Match: B9RJY9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1039710 PE=4 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 9.713e-23
Identity = 75/188 (39.89%), Postives = 97/188 (51.60%), Query Frame = 1
Query:  100 PQKLLAKLR-LRNRTGVKAKRHFVRGAQLLAQARSSKNKSRXXXXXXXXXXXXXXXXXXXXDPKDAASYLLKAMVLDLQGFRTXXXXXXXXXXXXXXXXXXXEGERGDALYKRAELKLATSER-GRVDSALKDLTESVILSPKNAKAWSALGECXXXXXXXXXXXXXXXXXXXXXPHFSVPLEALNRL 657
            PQK LAK R  R R G +AKR FV GAQ+LAQARS  N SR                    DPKDAA+++LKA+ LDLQGF++                   E E+GDAL+KRAEL +  +++  RV+SA++DL E+V LS +NA A+  LGEC                     P   +  +AL RL
Sbjct:   26 PQKALAKFREYRGRAGAEAKRQFVLGAQILAQARSPSN-SRSRTISLAKQAEEAAIKAISLDPKDAAAHILKALSLDLQGFKSSALDSLDVALSPLAVKSLSEREKGDALFKRAELVMGMNKKEKRVESAIEDLKEAVELSKENANAFRLLGECYEVKEMSEEAKFAYQEALRLNPDLGLAKDALQRL 212          
The following BLAST results are available for this feature:
BLAST of Ca_01475 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7J4K7_MEDTR1.438e-5054.38Putative uncharacterized protein OS=Medicago trunc... [more]
I3SDC7_MEDTR3.204e-5053.92Uncharacterized protein OS=Medicago truncatula PE=... [more]
I1JV82_SOYBN1.223e-3345.74Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I1K9S1_SOYBN7.927e-3344.84Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I1MB11_SOYBN5.138e-3246.28Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
B9GN96_POPTR4.071e-2950.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
M1AJJ6_SOLTU1.185e-2840.43Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
K4BU85_SOLLC1.448e-2639.36Uncharacterized protein OS=Solanum lycopersicum GN... [more]
F6HRZ1_VITVI6.084e-2539.89Putative uncharacterized protein OS=Vitis vinifera... [more]
B9RJY9_RICCO9.713e-2339.89Putative uncharacterized protein OS=Ricinus commun... [more]

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BLAST of Ca_01475 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helicalGENE3D1.25.40.10no descriptioncoord: 81..216
score: 1.9
IPR013026Tetratricopeptide repeat-containing domainPROFILEPS50293TPR_REGIONcoord: 142..209
score: 14
IPR019734Tetratricopeptide repeatSMARTSM00028Tetratricopeptide repeatscoord: 139..175
score: 1.7e+02coord: 176..209
score: 1
IPR019734Tetratricopeptide repeatPROFILEPS50005TPRcoord: 142..175
score: 5.605coord: 176..209
score: 11
NoneNo IPR availablePANTHERPTHR23083FAMILY NOT NAMEDcoord: 81..219
score: 1.4
NoneNo IPR availablePFAMPF13371TPR_9coord: 81..125
score:
NoneNo IPR availablePFAMPF13414TPR_11coord: 154..207
score: 7.1
NoneNo IPR availableSEGsegsegcoord: 13..33
score: NAcoord: 74..93
score: NAcoord: 116..134
score: NAcoord: 186..206
score
NoneNo IPR availableSUPERFAMILY48452TPR-likecoord: 89..216
score: 8.2
NoneNo IPR availableSEGsegsegcoord: 7..30
score
NoneNo IPR availableSEGsegsegcoord: 21..39
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_01475_v1.0_kabuli ID=Ca_01475_v1.0_kabuli; Name=Ca_01475; organism=Cicer arietinum; type=mRNA; length=666bp
ATGGACCCCAAGGAGAAACAAGCGATGTACCGCGACATCGGTTTACAAAT
CGTTATGATCCTTCTATTGATCTTAATGTTTCTCGGTATGCACGGTATTC
CACAGAAATTACTCGCCAAACTCCGACTCCGAAACCGAACCGGCGTCAAA
GCTAAGCGTCACTTCGTAAGAGGCGCTCAGCTTCTCGCACAAGCTAGATC
TTCCAAAAACAAATCCAGATCCGCTATAAATTCCCTCGCTAACGAAGCCC
TAGCCGAAGCCGAACAAGCAATCGCGCTTGATCCTAAAGACGCCGCTTCT
TATCTTCTCAAAGCTATGGTTCTCGATCTTCAAGGTTTTCGAACTTCCGC
GCTCGAATCTCTTGACGCGGCGTTGTCTCCGCTTGCGGCTGGTTCTTTAG
CCGAAGGTGAACGAGGTGACGCGCTTTATAAGAGAGCCGAGTTGAAACTC
GCGACGAGTGAACGCGGACGAGTTGACTCGGCGCTGAAGGATTTGACTGA
GTCGGTTATTTTGAGTCCTAAGAACGCGAAAGCTTGGTCTGCGTTGGGAG
AGTGCTATGAAGGAAAGAAAATGGAAGAGGAAGCTAAGAAGGCTTATAAG
GAGGCTCTTGAGTTGGAGCCACATTTTTCTGTGCCGCTAGAAGCACTTAA
CAGGTTATCCTCATAA
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protein sequence of Ca_01475_v1.0_kabuli

>Ca_01475_v1.0_kabuli ID=Ca_01475_v1.0_kabuli; Name=Ca_01475_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=221bp
MDPKEKQAMYRDIGLQIVMILLLILMFLGMHGIPQKLLAKLRLRNRTGVK
AKRHFVRGAQLLAQARSSKNKSRSAINSLANEALAEAEQAIALDPKDAAS
YLLKAMVLDLQGFRTSALESLDAALSPLAAGSLAEGERGDALYKRAELKL
ATSERGRVDSALKDLTESVILSPKNAKAWSALGECYEGKKMEEEAKKAYK
EALELEPHFSVPLEALNRLSS
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mRNA from alignment at Ca5:37436290..37436955-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_01475_v1.0_kabuli ID=Ca_01475_v1.0_kabuli; Name=Ca_01475; organism=Cicer arietinum; type=mRNA; length=666bp; location=Sequence derived from: Ca5:37436290..37436955- (Cicer arietinum
ATGGACCCCAAGGAGAAACAAGCGATGTACCGCGACATCGGTTTACAAAT CGTTATGATCCTTCTATTGATCTTAATGTTTCTCGGTATGCACGGTATTC CACAGAAATTACTCGCCAAACTCCGACTCCGAAACCGAACCGGCGTCAAA GCTAAGCGTCACTTCGTAAGAGGCGCTCAGCTTCTCGCACAAGCTAGATC TTCCAAAAACAAATCCAGATCCGCTATAAATTCCCTCGCTAACGAAGCCC TAGCCGAAGCCGAACAAGCAATCGCGCTTGATCCTAAAGACGCCGCTTCT TATCTTCTCAAAGCTATGGTTCTCGATCTTCAAGGTTTTCGAACTTCCGC GCTCGAATCTCTTGACGCGGCGTTGTCTCCGCTTGCGGCTGGTTCTTTAG CCGAAGGTGAACGAGGTGACGCGCTTTATAAGAGAGCCGAGTTGAAACTC GCGACGAGTGAACGCGGACGAGTTGACTCGGCGCTGAAGGATTTGACTGA GTCGGTTATTTTGAGTCCTAAGAACGCGAAAGCTTGGTCTGCGTTGGGAG AGTGCTATGAAGGAAAGAAAATGGAAGAGGAAGCTAAGAAGGCTTATAAG GAGGCTCTTGAGTTGGAGCCACATTTTTCTGTGCCGCTAGAAGCACTTAA CAGGTTATCCTCATAA
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Coding sequence (CDS) from alignment at Ca5:37436290..37436955-

>Ca_01475_v1.0_kabuli ID=Ca_01475_v1.0_kabuli; Name=Ca_01475; organism=Cicer arietinum; type=CDS; length=666bp; location=Sequence derived from: Ca5:37436290..37436955- (Cicer arietinum
ATGGACCCCAAGGAGAAACAAGCGATGTACCGCGACATCGGTTTACAAAT
CGTTATGATCCTTCTATTGATCTTAATGTTTCTCGGTATGCACGGTATTC
CACAGAAATTACTCGCCAAACTCCGACTCCGAAACCGAACCGGCGTCAAA
GCTAAGCGTCACTTCGTAAGAGGCGCTCAGCTTCTCGCACAAGCTAGATC
TTCCAAAAACAAATCCAGATCCGCTATAAATTCCCTCGCTAACGAAGCCC
TAGCCGAAGCCGAACAAGCAATCGCGCTTGATCCTAAAGACGCCGCTTCT
TATCTTCTCAAAGCTATGGTTCTCGATCTTCAAGGTTTTCGAACTTCCGC
GCTCGAATCTCTTGACGCGGCGTTGTCTCCGCTTGCGGCTGGTTCTTTAG
CCGAAGGTGAACGAGGTGACGCGCTTTATAAGAGAGCCGAGTTGAAACTC
GCGACGAGTGAACGCGGACGAGTTGACTCGGCGCTGAAGGATTTGACTGA
GTCGGTTATTTTGAGTCCTAAGAACGCGAAAGCTTGGTCTGCGTTGGGAG
AGTGCTATGAAGGAAAGAAAATGGAAGAGGAAGCTAAGAAGGCTTATAAG
GAGGCTCTTGAGTTGGAGCCACATTTTTCTGTGCCGCTAGAAGCACTTAA
CAGGTTATCCTCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom
IPR019734TPR_repeat
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0005515protein binding