Ca_01479, Ca_01479_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_01479 vs. TrEMBL
Match: G7IN16_MEDTR (Taxadien-5-alpha-ol O-acetyltransferase OS=Medicago truncatula GN=MTR_2g036780 PE=4 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 2.476e-33 Identity = 74/105 (70.48%), Postives = 82/105 (78.10%), Query Frame = 1 Query: 1 MNENHVLEKFEEEG--------YGAKLTFVDLEESEFYGVKLNGKKPIMTNCDFRGVGDQGVVLVLPAPQDDDDDGNNGRMITVSLPGNELNQMKSKLAREWGIQ 291 +NEN+ LEK E+G YGAKLTFVDLEE++ YGVKLNGKKPI NCD RGVGDQGVVLV P P +DDDGNNGRMI VSLPG EL+Q+K KL REWGIQ Sbjct: 333 INENYALEKLVEKGDGKDDFFVYGAKLTFVDLEEADLYGVKLNGKKPIRANCDLRGVGDQGVVLVFPGP--EDDDGNNGRMIKVSLPGKELDQLKYKLEREWGIQ 435
BLAST of Ca_01479 vs. TrEMBL
Match: G7J4L2_MEDTR (Omega-hydroxypalmitate O-feruloyl transferase OS=Medicago truncatula GN=MTR_3g100150 PE=4 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 7.456e-30 Identity = 68/99 (68.69%), Postives = 78/99 (78.79%), Query Frame = 1 Query: 1 MNENHVLEKFEEEG--------YGAKLTFVDLEESEFYGVKLNGKKPIMTNCDFRGVGDQGVVLVLPAPQDDDDDGNNGRMITVSLPGNELNQMKSKLA 273 MNENH LEK EEG YGAKLTFVDLEE FYGVK+NG+KPI+ NCDFRGVGDQGVVLVL P +D +GNNGRM+T+SLPG EL+Q+K KL+ Sbjct: 333 MNENHGLEKMMEEGEGKDDFIVYGAKLTFVDLEEGNFYGVKINGQKPILANCDFRGVGDQGVVLVLSGP--EDYNGNNGRMVTISLPGKELDQLKCKLS 429
BLAST of Ca_01479 vs. TrEMBL
Match: I1K9R7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 5.001e-26 Identity = 66/105 (62.86%), Postives = 77/105 (73.33%), Query Frame = 1 Query: 1 MNENHVLEKFEE--EG------YGAKLTFVDLEESEFY-GVKLNGKKPIMTNCDFRGVGDQGVVLVLPAPQDDDDDGNNGRMITVSLPGNELNQMKSKLAREWGI 288 M ENHV+EK E EG YG LTFV+LEE+ Y G+ LNG+KPIM NC FRGV D+GVVLVLPAP +DD+DG NGR++TVSLP EL Q+K KL EWGI Sbjct: 340 MVENHVMEKLVEADEGKEDFIVYGVNLTFVNLEEANIYDGMNLNGQKPIMANCTFRGVSDKGVVLVLPAP-EDDEDGGNGRIVTVSLPREELYQLKDKLGGEWGI 443
BLAST of Ca_01479 vs. TrEMBL
Match: I1JH08_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.043e-23 Identity = 58/101 (57.43%), Postives = 70/101 (69.31%), Query Frame = 1 Query: 7 ENHVLEKFEEEG--------YGAKLTFVDLEESEFYGVKLNGKKPIMTNCDFRGVGDQGVVLVLPAPQDDDDDGNNGRMITVSLPGNELNQMKSKLAREWG 285 EN V+EK EE YGA LTFVDLEE + Y V LNG KP++TNC GVGDQGVVLVLP +D+++ N GRM+TVSLP E++Q+K KL EWG Sbjct: 337 ENVVVEKLVEESQGKGDFVVYGANLTFVDLEEGDMYEVVLNGHKPVVTNCSIHGVGDQGVVLVLPGLEDEENGRNIGRMVTVSLPEKEVDQLKEKLRGEWG 437
BLAST of Ca_01479 vs. TrEMBL
Match: M5XQ19_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006117mg PE=4 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 3.838e-18 Identity = 45/82 (54.88%), Postives = 61/82 (74.39%), Query Frame = 1 Query: 43 YGAKLTFVDLEESEFYGVKLNGKKPIMTNCDFRGVGDQGVVLVLPAPQDDDDDGN--NGRMITVSLPGNELNQMKSKLAREW 282 YGA LTFV+LEE+E YG++L G+KP+ N GVGD+GVVLVLP P+ ++ N GR++TV LP NE+ Q+K++L REW Sbjct: 342 YGANLTFVNLEEAEIYGLELKGQKPVYANYSINGVGDEGVVLVLPGPKYGKEEANIHGGRLVTVVLPENEVAQLKTELQREW 423
BLAST of Ca_01479 vs. TrEMBL
Match: K7KJ60_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 6.547e-18 Identity = 57/105 (54.29%), Postives = 67/105 (63.81%), Query Frame = 1 Query: 1 MNENHVLEKFEE--EG------YGAKLTFVDLEESEFY-GVKLNGKKPIMTNCDFRGVGDQGVVLVLPAPQDDDDDGNNGRMITVSLPGNELNQMKSKLAREWGI 288 M ENHV+E+ E EG YG LTFV+LEE+ Y GVKLN +KPIM NC FRGV DQG + DGN GR++TVSLP EL+Q+K KL EWGI Sbjct: 188 MVENHVMEELVEGDEGREDFIAYGVNLTFVNLEEANIYDGVKLNEQKPIMANCTFRGVSDQG-----------EHDGN-GRIVTVSLPHEELDQLKDKLGEEWGI 280
BLAST of Ca_01479 vs. TrEMBL
Match: F6GWE4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0029g00480 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.488e-17 Identity = 43/83 (51.81%), Postives = 62/83 (74.70%), Query Frame = 1 Query: 43 YGAKLTFVDLEESEFYGVKLNGKKPIMTNCDFRGVGDQGVVLVL-PAPQDDDDDGNNGRMITVSLPGNELNQMKSKLAREWGI 288 YGA LTFV+LEE+ FYG++LNG+KP+ + G+GD+GVVLV P P+D D N G+++TV LP +++ ++KS+L REW I Sbjct: 352 YGANLTFVNLEEASFYGLELNGQKPVHVSYLIDGIGDEGVVLVAPPGPKDSGKDSNEGKIVTVILPEDQVMELKSELKREWSI 434
BLAST of Ca_01479 vs. TrEMBL
Match: A5BTN3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003221 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.488e-17 Identity = 43/83 (51.81%), Postives = 62/83 (74.70%), Query Frame = 1 Query: 43 YGAKLTFVDLEESEFYGVKLNGKKPIMTNCDFRGVGDQGVVLVL-PAPQDDDDDGNNGRMITVSLPGNELNQMKSKLAREWGI 288 YGA LTFV+LEE+ FYG++LNG+KP+ + G+GD+GVVLV P P+D D N G+++TV LP +++ ++KS+L REW I Sbjct: 229 YGANLTFVNLEEASFYGLELNGQKPVHVSYLIDGIGDEGVVLVAPPGPKDSGKDSNEGKIVTVILPEDQVMELKSELKREWSI 311
BLAST of Ca_01479 vs. TrEMBL
Match: B9H6U6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_558994 PE=4 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 6.128e-16 Identity = 42/89 (47.19%), Postives = 62/89 (69.66%), Query Frame = 1 Query: 25 KFEEEGYGAKLTFVDLEESEFYGVKLNGKKPIMTNCDFRGVGDQGVVLVLPA-PQDDDDDGNNGRMITVSLPGNELNQMKSKLAREWGI 288 +F+ YG LTFVDLEE+ YG++L G+KPI N +GVG+ GVVLVLPA P + ++GR +TV+LP N+L+++ ++L WG+ Sbjct: 347 EFDRIAYGTNLTFVDLEEANIYGLELKGQKPIFANYSIKGVGEGGVVLVLPAGPGNGSGKVSSGRTVTVTLPENQLSRLMNELKLHWGL 435
BLAST of Ca_01479 vs. TrEMBL
Match: B9TB76_RICCO (Transferase, putative OS=Ricinus communis GN=RCOM_0345770 PE=4 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 8.848e-15 Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = 1 Query: 43 YGAKLTFVDLEESEFYGVKLNGKKPIMTNCDFRGVGDQGVVLVLPAPQDDDDDGNNGRMITVSLPGNELNQMKSKL 270 YGA LTF++LEE+ YG++ G KPI + +GVGD+G V+VLP P+DD G+ GR++TV LP E+ ++KS+L Sbjct: 228 YGANLTFLNLEEANIYGLEWKGNKPIFVHYSIQGVGDEGAVIVLPWPEDDGKRGDTGRVVTVILPEKEMIELKSEL 303
BLAST of Ca_01479 vs. DB:Swiss
Match: CER2_ARATH (Protein ECERIFERUM 2 OS=Arabidopsis thaliana OX=3702 GN=CER2 PE=1 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 6.613e-11 Identity = 31/77 (40.26%), Postives = 47/77 (61.04%), Query Frame = 1 Query: 43 YGAKLTFVDLEESEFYGVKLNGKKPIMTNCDFRGVGDQGVVLVLPAPQDDDDDGNNGRMITVSLPGNELNQMKSKLA 273 YGA LTFV+L+E + Y +++NG KP N GVGD+GVVLV P N R+++V +P +L ++K ++ Sbjct: 348 YGANLTFVNLDEIDMYELEINGGKPDFVNYTIHGVGDKGVVLVFPKQ-------NFARIVSVVMPEEDLAKLKEEVT 417
BLAST of Ca_01479 vs. DB:Swiss
Match: CER26_ARATH (Protein ECERIFERUM 26 OS=Arabidopsis thaliana OX=3702 GN=CER26 PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.626e-10 Identity = 28/78 (35.90%), Postives = 48/78 (61.54%), Query Frame = 1 Query: 43 YGAKLTFVDLEESEFYGVKLNGKKPIMTNCDFRGVGDQGVVLVLPAPQDDDDDGNNGRMITVSLPGNELNQMKSKLAR 276 YGAKLTF+DL + Y K+ GK P C+ G+G++G+V+V A + ++ R++TV+LP E+ ++K + + Sbjct: 351 YGAKLTFLDLTGEDLYEAKVMGKSPESVYCNVEGIGEEGLVVVYAAAKSEE------RVVTVTLPEEEMERVKLEFKK 422
BLAST of Ca_01479 vs. DB:Swiss
Match: CR26L_ARATH (Protein ECERIFERUM 26-like OS=Arabidopsis thaliana OX=3702 GN=CER26L PE=2 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 1.412e-9 Identity = 24/46 (52.17%), Postives = 31/46 (67.39%), Query Frame = 1 Query: 43 YGAKLTFVDLEESEFYGVKLNGKKPIMTNCDFRGVGDQGVVLVLPA 180 YGA LTFVD+ E +FY K+ GK P C+ +G+GD G V+VLP Sbjct: 341 YGANLTFVDMSEVDFYEAKVMGKSPESVYCNVQGIGDDGAVVVLPG 386 The following BLAST results are available for this feature:
BLAST of Ca_01479 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25 Position : 0 Zoom : x 1
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BLAST of Ca_01479 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 3 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_01479_v1.0_kabuli ID=Ca_01479_v1.0_kabuli; Name=Ca_01479; organism=Cicer arietinum; type=mRNA; length=294bpback to top protein sequence of Ca_01479_v1.0_kabuli >Ca_01479_v1.0_kabuli ID=Ca_01479_v1.0_kabuli; Name=Ca_01479_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=97bpback to top mRNA from alignment at Ca5:37396808..37397101- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_01479_v1.0_kabuli ID=Ca_01479_v1.0_kabuli; Name=Ca_01479; organism=Cicer arietinum; type=mRNA; length=294bp; location=Sequence derived from: Ca5:37396808..37397101- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:37396808..37397101- >Ca_01479_v1.0_kabuli ID=Ca_01479_v1.0_kabuli; Name=Ca_01479; organism=Cicer arietinum; type=CDS; length=294bp; location=Sequence derived from: Ca5:37396808..37397101- (Cicer arietinumback to top |