Ca_01491, Ca_01491_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_01491
Unique NameCa_01491_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length240
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca5chromosomeCa5:37265232..37265951 -Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR371Pisum sativum Cameor genome v1aPisum sativum
capsR381Pisum sativum Cameor genome v1aPisum sativum
cavuR372Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR390Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR412Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR446Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR445Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR476Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR514Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0644Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0659Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0697Cajanus cajan Asha genome v1.0Cajanus cajan
cazwsR337Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR341Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR353Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR373Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR400Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR375Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR402Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR395Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR425Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR412Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR440Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR472Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR356Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR371Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR402Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR415Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR169Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR189Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacarR362Cicer arietinum
cacarR393Cicer arietinum
cacarR415Cicer arietinum
cacarR429Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-XM_014644554.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr09.1866Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.009G037300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun02g084000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.model.Chr02.883Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-KK1_009265Cajanus cajan Asha genome v1.0Cajanus cajan
Phvul.002G147600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun09g182600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004501582.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_01491-CDS1Ca_01491-CDS1Cicer arietinumCDS
Ca_01491-CDS2Ca_01491-CDS2Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_01491_v1.0_kabuliCa_01491_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_01491 vs. SwissProt
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.072e-15
Identity = 38/45 (84.44%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCST 180
            ARQVTFSKRR+GLFKKAEELSVLCDA+V LI+FSSTGKLF++CS+
Sbjct:   16 ARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSS 60
[Close]
BLAST of Ca_01491 vs. SwissProt
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.400e-15
Identity = 41/55 (74.55%), Postives = 45/55 (81.82%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCSTRFSFGSSRND 210
            ARQVTFSKRR+GLFKKAEELSVLCDA+V LI+FSSTGKLFDY S+       R D
Sbjct:   16 ARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSSSMKQILERRD 70
[Close]
BLAST of Ca_01491 vs. SwissProt
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.828e-15
Identity = 38/45 (84.44%), Postives = 43/45 (95.56%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCST 180
            ARQVTFSKRR+GLFKKAEELS+LCDAEVGL+VFS+TGKLF + ST
Sbjct:   35 ARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFAST 79
[Close]
BLAST of Ca_01491 vs. SwissProt
Match: AGL24_ARATH (MADS-box protein AGL24 OS=Arabidopsis thaliana GN=AGL24 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.448e-14
Identity = 35/46 (76.09%), Postives = 44/46 (95.65%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCSTR 183
            ARQVTFSKRR+G+FKKA+ELSVLCDA+V LI+FS+TGKLF++ S+R
Sbjct:   16 ARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSSR 61
[Close]
BLAST of Ca_01491 vs. SwissProt
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.448e-14
Identity = 35/45 (77.78%), Postives = 43/45 (95.56%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCST 180
            +RQVTFSKRRKGL KKA+EL++LCDAEVGLI+FSSTGKL+D+ S+
Sbjct:   16 SRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60
[Close]
BLAST of Ca_01491 vs. SwissProt
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica GN=MADS2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.503e-14
Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = 1 
Query:   49 RQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCSTRFS 189
            RQVTFSKRR G+ KKA E+SVLCDAEVG+++FSS GKL+DYCS + S
Sbjct:   17 RQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTS 63
[Close]
BLAST of Ca_01491 vs. SwissProt
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 5.881e-14
Identity = 36/69 (52.17%), Postives = 50/69 (72.46%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCSTRFS-----FGSSRNDNYVTLKQTS 237
            +RQVTFSKRR G+FKKA+EL++LCDAEVGL++FSSTG+L++Y ST        +G S+++        S
Sbjct:   16 SRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSSTSMKSVIDRYGKSKDEQQAVANPNS 84
[Close]
BLAST of Ca_01491 vs. SwissProt
Match: ANR1_ARATH (MADS-box transcription factor ANR1 OS=Arabidopsis thaliana GN=ANR1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.881e-14
Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCS 177
            +RQVTFSKRR GL KKA+ELS+LCDAEVG+I+FSSTGKL+DY S
Sbjct:   16 SRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYAS 59
[Close]
BLAST of Ca_01491 vs. SwissProt
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.681e-14
Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCSTRFS-----FGSSRNDNYVTLKQTS 237
            +RQVTFSKRR GLFKKA ELS+LCDAEVGL+VFSST +L+D+ S+        +  ++ D + T+  +S
Sbjct:   16 SRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSSMKSIIERYNETKEDPHQTMNASS 84
[Close]
BLAST of Ca_01491 vs. SwissProt
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.310e-13
Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCSTRFSFGSSRNDN 213
            +RQVTFSKRR GL KKA+ELS+LCDAEVGL+VFSSTG+L+++ ST       R  N
Sbjct:   16 SRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSSTNMKTVIDRYTN 71
[Close]
BLAST of Ca_01491 vs. TrEMBL
Match: K7KJ40_SOYBN (Uncharacterized protein (Fragment) OS=Glycine max PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 3.142e-15
Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCSTRF 186
            ARQVTFSKRR+GLFKKAEELSVLCDAEVGLIVFSSTGKLFDY + R+
Sbjct:   20 ARQVTFSKRRRGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYSNARY 66
[Close]
BLAST of Ca_01491 vs. TrEMBL
Match: K7KU70_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 7.000e-15
Identity = 46/55 (83.64%), Postives = 47/55 (85.45%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCSTRFSFGSSRND 210
            ARQVTFSKRR+GLFKKAEELSVLCDAEVGLIVFSSTGKLFDY S      SS ND
Sbjct:   16 ARQVTFSKRRRGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYSS------SSMND 64
[Close]
BLAST of Ca_01491 vs. TrEMBL
Match: C6T8M2_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 7.000e-15
Identity = 46/55 (83.64%), Postives = 47/55 (85.45%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCSTRFSFGSSRND 210
            ARQVTFSKRR+GLFKKAEELSVLCDAEVGLIVFSSTGKLFDY S      SS ND
Sbjct:   16 ARQVTFSKRRRGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYSS------SSMND 64
[Close]
BLAST of Ca_01491 vs. TrEMBL
Match: M1BBZ0_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400016203 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.559e-14
Identity = 41/55 (74.55%), Postives = 46/55 (83.64%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCSTRFSFGSSRND 210
            ARQVTFSKRR+GLFKKAEELSVLCDA+V LI+FSSTGKLFDYC++       R D
Sbjct:   16 ARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYCNSSMKQILERRD 70
[Close]
BLAST of Ca_01491 vs. TrEMBL
Match: G7IS84_MEDTR (MADS-box family transcription factor OS=Medicago truncatula GN=MTR_2g009840 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.660e-14
Identity = 40/47 (85.11%), Postives = 44/47 (93.62%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCSTRF 186
            +RQVTFSKRR GL KKA+ELS+LCDAEVGLIVFSSTGKL+DY STRF
Sbjct:   16 SRQVTFSKRRNGLLKKAKELSILCDAEVGLIVFSSTGKLYDYSSTRF 62
[Close]
BLAST of Ca_01491 vs. TrEMBL
Match: A3AEX0_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_09699 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.474e-14
Identity = 39/46 (84.78%), Postives = 44/46 (95.65%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCSTR 183
            ARQVTFSKRR+GLFKKAEELS+LCDAEVGL+VFS+TGKLF + STR
Sbjct:   35 ARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTR 80
[Close]
BLAST of Ca_01491 vs. TrEMBL
Match: Q84LN9_EUCGR (SVP-like floral repressor OS=Eucalyptus grandis PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 5.926e-14
Identity = 39/45 (86.67%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCST 180
            ARQVTFSKRR+GLFKKAEELSVLCDA+V LIVFSS+GKLF+YCS+
Sbjct:   16 ARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSSGKLFEYCSS 60
[Close]
BLAST of Ca_01491 vs. TrEMBL
Match: Q7Y1U9_9MYRT (SVP-like floral repressor OS=Eucalyptus occidentalis PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 5.926e-14
Identity = 39/45 (86.67%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCST 180
            ARQVTFSKRR+GLFKKAEELSVLCDA+V LIVFSS+GKLF+YCS+
Sbjct:   16 ARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSSGKLFEYCSS 60
[Close]
BLAST of Ca_01491 vs. TrEMBL
Match: M4EN58_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra030228 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 5.926e-14
Identity = 39/45 (86.67%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCST 180
            ARQVTFSKRR+GLFKKAEELSVLCDA+V LIVFSSTGKLF++CS+
Sbjct:   16 ARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLFEFCSS 60
[Close]
BLAST of Ca_01491 vs. TrEMBL
Match: I6TN85_BRANA (MADS-box protein SVP OS=Brassica napus GN=SVP PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 5.926e-14
Identity = 39/45 (86.67%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCST 180
            ARQVTFSKRR+GLFKKAEELSVLCDA+V LIVFSSTGKLF++CS+
Sbjct:   16 ARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLFEFCSS 60
[Close]
BLAST of Ca_01491 vs. DB:Swiss
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana OX=3702 GN=SVP PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 7.667e-21
Identity = 38/45 (84.44%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCST 180
            ARQVTFSKRR+GLFKKAEELSVLCDA+V LI+FSSTGKLF++CS+
Sbjct:   16 ARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSS 60
[Close]
BLAST of Ca_01491 vs. DB:Swiss
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS47 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.607e-20
Identity = 38/45 (84.44%), Postives = 43/45 (95.56%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCST 180
            ARQVTFSKRR+GLFKKAEELS+LCDAEVGL+VFS+TGKLF + ST
Sbjct:   35 ARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFAST 79
[Close]
BLAST of Ca_01491 vs. DB:Swiss
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum OX=4081 GN=J PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.369e-20
Identity = 45/68 (66.18%), Postives = 49/68 (72.06%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCSTRFSFGSSRND----NYVTLKQTS 237
            ARQVTFSKRR+GLFKKAEELSVLCDA+V LI+FSSTGKLFDY S+       R D    N   L Q S
Sbjct:   16 ARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSSSMKQILERRDLHSKNLEKLDQPS 83
[Close]
BLAST of Ca_01491 vs. DB:Swiss
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana OX=3702 GN=AGL21 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.728e-19
Identity = 35/45 (77.78%), Postives = 43/45 (95.56%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCST 180
            +RQVTFSKRRKGL KKA+EL++LCDAEVGLI+FSSTGKL+D+ S+
Sbjct:   16 SRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60
[Close]
BLAST of Ca_01491 vs. DB:Swiss
Match: ANR1_ARATH (MADS-box transcription factor ANR1 OS=Arabidopsis thaliana OX=3702 GN=ANR1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 3.661e-19
Identity = 35/45 (77.78%), Postives = 41/45 (91.11%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCST 180
            +RQVTFSKRR GL KKA+ELS+LCDAEVG+I+FSSTGKL+DY S 
Sbjct:   16 SRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASN 60
[Close]
BLAST of Ca_01491 vs. DB:Swiss
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS2 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 4.028e-19
Identity = 34/48 (70.83%), Postives = 41/48 (85.42%), Query Frame = 1 
Query:   49 RQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCSTRFSF 192
            RQVTFSKRR G+ KKA E+SVLCDAEVG+++FSS GKL+DYCS + S 
Sbjct:   17 RQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSL 64
[Close]
BLAST of Ca_01491 vs. DB:Swiss
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS23 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.131e-19
Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCSTRFS-----FGSSRNDNYVTLKQTS 237
            +RQVTFSKRR GLFKKA ELS+LCDAEVGL+VFSST +L+D+ S+        +  ++ D + T+  +S
Sbjct:   16 SRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSSMKSIIERYNETKEDPHQTMNASS 84
[Close]
BLAST of Ca_01491 vs. DB:Swiss
Match: AGL24_ARATH (MADS-box protein AGL24 OS=Arabidopsis thaliana OX=3702 GN=AGL24 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 9.145e-19
Identity = 35/47 (74.47%), Postives = 44/47 (93.62%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCSTRF 186
            ARQVTFSKRR+G+FKKA+ELSVLCDA+V LI+FS+TGKLF++ S+R 
Sbjct:   16 ARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSSRM 62
[Close]
BLAST of Ca_01491 vs. DB:Swiss
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS27 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.093e-18
Identity = 35/60 (58.33%), Postives = 49/60 (81.67%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCSTRFS-----FGSSRND 210
            +RQVTFSKRR G+FKKA+EL++LCDAEVGL++FSSTG+L++Y ST        +G S+++
Sbjct:   16 SRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSSTSMKSVIDRYGKSKDE 75
[Close]
BLAST of Ca_01491 vs. DB:Swiss
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS22 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.573e-18
Identity = 37/48 (77.08%), Postives = 42/48 (87.50%), Query Frame = 1 
Query:   46 ARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYCSTRFS 189
            ARQVTFSKRR+GLFKKAEELSVLCDA+V LIVFSSTGKL  + S+  +
Sbjct:   16 ARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSSMN 63
The following BLAST results are available for this feature:
BLAST of Ca_01491 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
SVP_ARATH1.072e-1584.44MADS-box protein SVP OS=Arabidopsis thaliana GN=SV... [more]
JOIN_SOLLC1.400e-1574.55MADS-box protein JOINTLESS OS=Solanum lycopersicum... [more]
MAD47_ORYSJ1.828e-1584.44MADS-box transcription factor 47 OS=Oryza sativa s... [more]
AGL24_ARATH3.448e-1476.09MADS-box protein AGL24 OS=Arabidopsis thaliana GN=... [more]
AGL21_ARATH3.448e-1477.78Agamous-like MADS-box protein AGL21 OS=Arabidopsis... [more]
MADS2_ORYSJ4.503e-1472.34MADS-box transcription factor 2 OS=Oryza sativa su... [more]
MAD27_ORYSJ5.881e-1452.17MADS-box transcription factor 27 OS=Oryza sativa s... [more]
ANR1_ARATH5.881e-1479.55MADS-box transcription factor ANR1 OS=Arabidopsis ... [more]
MAD23_ORYSJ7.681e-1453.62MADS-box transcription factor 23 OS=Oryza sativa s... [more]
MAD57_ORYSJ1.310e-1364.29MADS-box transcription factor 57 OS=Oryza sativa s... [more]

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BLAST of Ca_01491 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
K7KJ40_SOYBN3.142e-1589.36Uncharacterized protein (Fragment) OS=Glycine max ... [more]
K7KU70_SOYBN7.000e-1583.64Uncharacterized protein OS=Glycine max PE=3 SV=1[more]
C6T8M2_SOYBN7.000e-1583.64Uncharacterized protein OS=Glycine max PE=2 SV=1[more]
M1BBZ0_SOLTU1.559e-1474.55Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
G7IS84_MEDTR2.660e-1485.11MADS-box family transcription factor OS=Medicago t... [more]
A3AEX0_ORYSJ3.474e-1484.78Putative uncharacterized protein OS=Oryza sativa s... [more]
Q84LN9_EUCGR5.926e-1486.67SVP-like floral repressor OS=Eucalyptus grandis PE... [more]
Q7Y1U9_9MYRT5.926e-1486.67SVP-like floral repressor OS=Eucalyptus occidental... [more]
M4EN58_BRARP5.926e-1486.67Uncharacterized protein OS=Brassica rapa subsp. pe... [more]
I6TN85_BRANA5.926e-1486.67MADS-box protein SVP OS=Brassica napus GN=SVP PE=2... [more]

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BLAST of Ca_01491 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
SVP_ARATH7.667e-2184.44MADS-box protein SVP OS=Arabidopsis thaliana OX=37... [more]
MAD47_ORYSJ1.607e-2084.44MADS-box transcription factor 47 OS=Oryza sativa s... [more]
JOIN_SOLLC2.369e-2066.18MADS-box protein JOINTLESS OS=Solanum lycopersicum... [more]
AGL21_ARATH1.728e-1977.78Agamous-like MADS-box protein AGL21 OS=Arabidopsis... [more]
ANR1_ARATH3.661e-1977.78MADS-box transcription factor ANR1 OS=Arabidopsis ... [more]
MADS2_ORYSJ4.028e-1970.83MADS-box transcription factor 2 OS=Oryza sativa su... [more]
MAD23_ORYSJ5.131e-1953.62MADS-box transcription factor 23 OS=Oryza sativa s... [more]
AGL24_ARATH9.145e-1974.47MADS-box protein AGL24 OS=Arabidopsis thaliana OX=... [more]
MAD27_ORYSJ1.093e-1858.33MADS-box transcription factor 27 OS=Oryza sativa s... [more]
MAD22_ORYSJ1.573e-1877.08MADS-box transcription factor 22 OS=Oryza sativa s... [more]
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 3..23
score: 2.9e-27coord: 23..38
score: 2.9e-27coord: 38..59
score: 2.9
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 9..59
score: 9.2
IPR002100Transcription factor, MADS-boxSMARTSM00432no descriptioncoord: 1..60
score: 1.7
IPR002100Transcription factor, MADS-boxPROSITEPS00350MADS_BOX_1coord: 3..57
score
IPR002100Transcription factor, MADS-boxPROFILEPS50066MADS_BOX_2coord: 1..61
score: 29
IPR002100Transcription factor, MADS-boxSUPERFAMILY55455SRF-likecoord: 2..61
score: 9.4
NoneNo IPR availablePANTHERPTHR11945FAMILY NOT NAMEDcoord: 3..62
score: 1.7
NoneNo IPR availableSEGsegsegcoord: 4..15
score
NoneNo IPR availableSEGsegsegcoord: 12..25
score: NAcoord: 42..55
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_01491_v1.0_kabuli ID=Ca_01491_v1.0_kabuli; Name=Ca_01491; organism=Cicer arietinum; type=mRNA; length=240bp
ATGAAGAGGAAGAAGATAACTATAAAGAAAATCGACGACAAAACGGCGAG
GCAGGTAACATTTTCTAAGAGAAGGAAAGGGCTATTCAAGAAAGCTGAAG
AGCTTTCAGTGCTATGTGATGCTGAGGTTGGACTCATTGTTTTCTCATCT
ACTGGGAAGCTCTTTGATTATTGCAGCACCAGGTTTTCGTTTGGAAGCTC
AAGAAACGATAATTATGTGACTTTGAAACAAACCAGTTAG
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protein sequence of Ca_01491_v1.0_kabuli

>Ca_01491_v1.0_kabuli ID=Ca_01491_v1.0_kabuli; Name=Ca_01491_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=79bp
MKRKKITIKKIDDKTARQVTFSKRRKGLFKKAEELSVLCDAEVGLIVFSS
TGKLFDYCSTRFSFGSSRNDNYVTLKQTS
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mRNA from alignment at Ca5:37265232..37265951-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_01491_v1.0_kabuli ID=Ca_01491_v1.0_kabuli; Name=Ca_01491; organism=Cicer arietinum; type=mRNA; length=720bp; location=Sequence derived from: Ca5:37265232..37265951- (Cicer arietinum
ATGAAGAGGAAGAAGATAACTATAAAGAAAATCGACGACAAAACGGCGAG
GCAGGTAACATTTTCTAAGAGAAGGAAAGGGCTATTCAAGAAAGCTGAAG
AGCTTTCAGTGCTATGTGATGCTGAGGTTGGACTCATTGTTTTCTCATCT
ACTGGGAAGCTCTTTGATTATTGCAGCACCAGGTACACCTTATGATTTTT
CATTTCTCTCTTAAATATATTATTTTTTATTTAGTTTCAAATTTAATAAT
TAGCTCATATTTGCGCATTTTAATTTCTAACATACAATTTGCACATGTAT
TAAGAATAGTTATTAGTTGCATTTTATTTTTTTATGCAATCAAAAAATTA
TTATATTTCTTAAACTACATCTACCTTTAATTTAGTTTTGTATATATGAT
AAATTATTATATATGTTCAAGAATATTTTGAAAAAAAAAACACGTATGAA
ATTAATTTGTTTTGTTTATATTTGAGATTATAGAGTATATTTAAAGATTT
TGTAATGTGTGAGTGTGAGGTGATTGGACATATGGAGTAAATCTTAGGAC
AGAAACCTCGTTCCAGTAGCTTAATAATATTTTCCTTAATATTATGGAAA
ATTTAGCTTATCGAAGTTTCTAGGAAACAGTGTTCTGAGAAATGTAAAGT
TTGGAATGATAGGTTTTCGTTTGGAAGCTCAAGAAACGATAATTATGTGA
CTTTGAAACAAACCAGTTAG
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Coding sequence (CDS) from alignment at Ca5:37265232..37265951-

>Ca_01491_v1.0_kabuli ID=Ca_01491_v1.0_kabuli; Name=Ca_01491; organism=Cicer arietinum; type=CDS; length=240bp; location=Sequence derived from: Ca5:37265232..37265951- (Cicer arietinum
ATGAAGAGGAAGAAGATAACTATAAAGAAAATCGACGACAAAACGGCGAG
GCAGGTAACATTTTCTAAGAGAAGGAAAGGGCTATTCAAGAAAGCTGAAG
AGCTTTCAGTGCTATGTGATGCTGAGGTTGGACTCATTGTTTTCTCATCT
ACTGGGAAGCTCTTTGATTATTGCAGCACCAGGTTTTCGTTTGGAAGCTC
AAGAAACGATAATTATGTGACTTTGAAACAAACCAGTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002100TF_MADSbox
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046983protein dimerization activity