Ca_01525, Ca_01525_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_01525 vs. SwissProt
Match: MIZ1_ARATH (Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana GN=MIZ1 PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.030e-33 Identity = 78/169 (46.15%), Postives = 108/169 (63.91%), Query Frame = 1 Query: 94 TGTIFGYRKGRVSLAIQEDTRQMPIFLIELPMLTSALNKEMGSDIVRIALESETKSNK-KKLLEEFVWAVYCNGRKVGYSIRR-KQMGDDELYVMQHLRGVSMGAGVLPT------TSDHNKDTSDGEMTYMRGRFERVVGSKDSEAFYMINPDNIAAQAPEFSIFFVR 576 TGT++G+++G V+ ++Q + R P+ L++L M T+ L KEM S +VRIALE E + KL +E W +YCNGRK GY++ R D + V+ + V++GAGV+PT S T GE+ YMRG+FERVVGS+DSEAFYM+NPD PE SIF +R Sbjct: 130 TGTLYGHKRGHVTFSVQYNQRSDPVLLLDLAMSTATLVKEMSSGLVRIALECEKRHRSGTKLFQEPKWTMYCNGRKCGYAVSRGGACTDTDWRVLNTVSRVTVGAGVIPTPKTIDDVSGVGSGTELGELLYMRGKFERVVGSRDSEAFYMMNPDKNG--GPELSIFLLR 296
BLAST of Ca_01525 vs. TrEMBL
Match: G7J5T6_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g101300 PE=4 SV=1) HSP 1 Score: 346.665 bits (888), Expect = 2.151e-93 Identity = 174/196 (88.78%), Postives = 182/196 (92.86%), Query Frame = 1 Query: 1 MFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGTIFGYRKGRVSLAIQEDTRQMPIFLIELPMLTSALNKEMGSDIVRIALESETKSNKKKLLEEFVWAVYCNGRKVGYSIRRKQMGDDELYVMQHLRGVSMGAGVLPTTSDHNKDTSDGEMTYMRGRFERVVGSKDSEAFYMINPD---NIAAQAPEFSIFFVRS 579 MFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGTIFGYRKGRVS+AIQEDTRQMPIFLIELPMLTSALNKEM SDIVRIALESETK+NKKKLLEEFVWAVYCNGRKVGYSIRRKQMGD+EL VMQHLRGVSMGAGVLPT SDH + + +MTYMRGRFERV+GSKDSEAFYMINPD N AQ PEFSIFFVR+ Sbjct: 41 MFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGTIFGYRKGRVSIAIQEDTRQMPIFLIELPMLTSALNKEMSSDIVRIALESETKTNKKKLLEEFVWAVYCNGRKVGYSIRRKQMGDEELQVMQHLRGVSMGAGVLPTASDHKESSDGDQMTYMRGRFERVIGSKDSEAFYMINPDNNINNGAQGPEFSIFFVRA 236
BLAST of Ca_01525 vs. TrEMBL
Match: I3SPZ3_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 335.88 bits (860), Expect = 3.797e-90 Identity = 171/193 (88.60%), Postives = 179/193 (92.75%), Query Frame = 1 Query: 1 MFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGTIFGYRKGRVSLAIQEDTRQMPIFLIELPMLTSALNKEMGSDIVRIALESETKSNKKKLLEEFVWAVYCNGRKVGYSIRRKQMGDDELYVMQHLRGVSMGAGVLPTTSDHNKDTSDGEMTYMRGRFERVVGSKDSEAFYMINPDNIAAQAPEFSIFFVRS 579 MFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGTIFG+RKGRVSLAIQEDTRQMPIFLIELPMLTSALNKEM SDIVRIALESETKSNKKK++EEFVWAVYCNGRKVGYSIRRKQM DDEL+VMQHLRGVSMGAGVLP SD+ + SDGEMTYMR RFERV+GSKDSEA YMINPD AQ PE SIFFVR+ Sbjct: 47 MFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGTIFGFRKGRVSLAIQEDTRQMPIFLIELPMLTSALNKEMASDIVRIALESETKSNKKKVMEEFVWAVYCNGRKVGYSIRRKQMSDDELHVMQHLRGVSMGAGVLP--SDNKESNSDGEMTYMRARFERVIGSKDSEALYMINPD--GAQGPELSIFFVRA 235
BLAST of Ca_01525 vs. TrEMBL
Match: C6T9U8_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 330.487 bits (846), Expect = 1.595e-88 Identity = 173/192 (90.10%), Postives = 179/192 (93.23%), Query Frame = 1 Query: 1 MFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGTIFGYRKGRVSLAIQEDTRQMPIFLIELPMLTSALNKEMGSDIVRIALESETKSNKKKLLEEFVWAVYCNGRKVGYSIRRKQMGDDELYVMQHLRGVSMGAGVLPTTSDHNKDTSDGEMTYMRGRFERVVGSKDSEAFYMINPDNIAAQAPEFSIFFVR 576 M KLFPML+SGCKMVALLGRPRK MLKDSATTGTIFGYRKGRVSLAIQEDTRQMP+FLIELPML SALNKEM SDIVRIALESETKSNKKKLLEE+VWAVYCNGRKVGYSIRRKQM DDEL+VMQHLRGVSMGAGVLPT+SDH KD DGEMTYMR RFERVVGSKDSEAFYMINPD+ AQ PE SIFFVR Sbjct: 43 MLKLFPMLSSGCKMVALLGRPRK-MLKDSATTGTIFGYRKGRVSLAIQEDTRQMPVFLIELPMLASALNKEMASDIVRIALESETKSNKKKLLEEYVWAVYCNGRKVGYSIRRKQMSDDELHVMQHLRGVSMGAGVLPTSSDH-KD-CDGEMTYMRARFERVVGSKDSEAFYMINPDS-TAQGPELSIFFVR 230
BLAST of Ca_01525 vs. TrEMBL
Match: I1K7X1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 6.935e-84 Identity = 165/192 (85.94%), Postives = 174/192 (90.62%), Query Frame = 1 Query: 1 MFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGTIFGYRKGRVSLAIQEDTRQMPIFLIELPMLTSALNKEMGSDIVRIALESETKSNKKKLLEEFVWAVYCNGRKVGYSIRRKQMGDDELYVMQHLRGVSMGAGVLPTTSDHNKDTSDGEMTYMRGRFERVVGSKDSEAFYMINPDNIAAQAPEFSIFFVR 576 M KLFPML+SGCKMVALLGRPRK MLKDSATTGTIFGYRKGRVSLAIQEDTRQMPIFLIELPM+ SALNKEM SDIVRIALESETKSNKKKLLEEFVWAVYCNGRKVGYSIRRKQM DDEL+VMQHLRGVSMGAGVLPT+SDH KD DGEMTY+R F+RVVGS DS+A Y+INPD A PE SIFF+R Sbjct: 42 MLKLFPMLSSGCKMVALLGRPRK-MLKDSATTGTIFGYRKGRVSLAIQEDTRQMPIFLIELPMMASALNKEMASDIVRIALESETKSNKKKLLEEFVWAVYCNGRKVGYSIRRKQMSDDELHVMQHLRGVSMGAGVLPTSSDH-KD-CDGEMTYIRASFQRVVGSMDSQALYIINPD-ATAHGPELSIFFLR 229
BLAST of Ca_01525 vs. TrEMBL
Match: B9R7H9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1591900 PE=4 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 9.374e-81 Identity = 154/193 (79.79%), Postives = 173/193 (89.64%), Query Frame = 1 Query: 1 MFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGTIFGYRKGRVSLAIQEDTRQMPIFLIELPMLTSALNKEMGSDIVRIALESETKSNKKKLLEEFVWAVYCNGRKVGYSIRRKQMGDDELYVMQHLRGVSMGAGVLPTTSDHNKDTSDGEMTYMRGRFERVVGSKDSEAFYMINPDNIAAQAPEFSIFFVRS 579 MFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGT+FGYRKGRVSLAIQED +P+F+IELP+ TSA +KEM SDIVRIALESETK++KKK++EEFVWAVYCNGRK+GYSIRRKQM DDEL+VMQ LRGVSMGAGVLP S + K+T+DGE+TY+R RF+RVVGSKDSEA YMINPD A PE SIFFVR+ Sbjct: 40 MFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGTLFGYRKGRVSLAIQEDPHCVPMFVIELPIHTSAFHKEMASDIVRIALESETKTHKKKVMEEFVWAVYCNGRKIGYSIRRKQMSDDELHVMQLLRGVSMGAGVLP--SPNEKETADGELTYIRARFDRVVGSKDSEALYMINPD--GAAGPELSIFFVRA 228
BLAST of Ca_01525 vs. TrEMBL
Match: I3S7J6_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 304.294 bits (778), Expect = 1.224e-80 Identity = 155/172 (90.12%), Postives = 163/172 (94.77%), Query Frame = 1 Query: 1 MFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGTIFGYRKGRVSLAIQEDTRQMPIFLIELPMLTSALNKEMGSDIVRIALESETKSNKKKLLEEFVWAVYCNGRKVGYSIRRKQMGDDELYVMQHLRGVSMGAGVLPTTSDHNKDTSDGEM-TYMRGRFERVVGSKDSEAF 513 MFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGTIFGYRKGRVS+AIQEDTRQMPIFLIELPMLTSALNKEM SDIVRIALESETK+NKKKLLEEFVWAVYCNGRKVGYSIRRKQMGD+EL VMQHLRGVSMGAGVLPT SDH K++SDG+ TYMRGRFERV+GSK + F Sbjct: 41 MFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGTIFGYRKGRVSIAIQEDTRQMPIFLIELPMLTSALNKEMSSDIVRIALESETKTNKKKLLEEFVWAVYCNGRKVGYSIRRKQMGDEELQVMQHLRGVSMGAGVLPTASDH-KESSDGDQTTYMRGRFERVIGSKILKLF 211
BLAST of Ca_01525 vs. TrEMBL
Match: F6H1E2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g11160 PE=4 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 2.727e-80 Identity = 153/192 (79.69%), Postives = 171/192 (89.06%), Query Frame = 1 Query: 1 MFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGTIFGYRKGRVSLAIQEDTRQMPIFLIELPMLTSALNKEMGSDIVRIALESETKSNKKKLLEEFVWAVYCNGRKVGYSIRRKQMGDDELYVMQHLRGVSMGAGVLPTTSDHNKDTSDGEMTYMRGRFERVVGSKDSEAFYMINPDNIAAQAPEFSIFFVR 576 MFKLFP+LTSGCKMVALLGRPR+P + DSATTGTIFGYRKGRVSLAIQ+D +P+F+IELPMLTS L+KEM SDI+RIALESETK++KKKL+EEFVWAVYCNGRK+GYSIRRKQM D+EL+VMQ LRGVSMGAGVLP SD KDT+DGE+TYMR RFERVVGSKDSEA +MINPD A PE SIFFVR Sbjct: 39 MFKLFPLLTSGCKMVALLGRPRRPQIGDSATTGTIFGYRKGRVSLAIQDDPHCVPMFIIELPMLTSLLHKEMASDIIRIALESETKTHKKKLMEEFVWAVYCNGRKIGYSIRRKQMSDEELHVMQLLRGVSMGAGVLPCQSD--KDTADGELTYMRARFERVVGSKDSEALHMINPD--GAGGPELSIFFVR 226
BLAST of Ca_01525 vs. TrEMBL
Match: M5XHU5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010854mg PE=4 SV=1) HSP 1 Score: 302.368 bits (773), Expect = 4.652e-80 Identity = 155/193 (80.31%), Postives = 170/193 (88.08%), Query Frame = 1 Query: 1 MFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGTIFGYRKGRVSLAIQEDTRQMPIFLIELPMLTSALNKEMGSDIVRIALESETKSNKKKLLEEFVWAVYCNGRKVGYSIRRKQMGDDELYVMQHLRGVSMGAGVLPTTSDHNKDTSDGEMTYMRGRFERVVGSKDSEAFYMINPDNIAAQAPEFSIFFVRS 579 MFKLFPMLTSGCKMVALLGRPRKP+LKD+ATTGTIFGYRKGRVSLAIQED MP+F+IELPM +S +KEM SDIVRIALESETK+NKKKLLEEFVWAVYCNGRKVGYSIRRKQM +DEL+VMQ LRGVSMGAGVLP+ S+ + SDGE+TY+R RFERVVGSKDSEA YMINPD A PE SIF VR+ Sbjct: 43 MFKLFPMLTSGCKMVALLGRPRKPLLKDNATTGTIFGYRKGRVSLAIQEDPHCMPLFVIELPMHSSVFHKEMASDIVRIALESETKTNKKKLLEEFVWAVYCNGRKVGYSIRRKQMSEDELHVMQTLRGVSMGAGVLPSPSE-KEYASDGELTYIRARFERVVGSKDSEALYMINPD--GAAGPELSIFIVRA 232
BLAST of Ca_01525 vs. TrEMBL
Match: B9MVK4_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_286843 PE=4 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 2.553e-78 Identity = 152/192 (79.17%), Postives = 167/192 (86.98%), Query Frame = 1 Query: 1 MFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGTIFGYRKGRVSLAIQEDTRQMPIFLIELPMLTSALNKEMGSDIVRIALESETKSNKKKLLEEFVWAVYCNGRKVGYSIRRKQMGDDELYVMQHLRGVSMGAGVLPTTSDHNKDTSDGEMTYMRGRFERVVGSKDSEAFYMINPDNIAAQAPEFSIFFVR 576 MFKLFPMLTSGCKMVALLGRPRKP+LKD ATTGTIFGYRKGRVSLAIQED P+F+IELPM +S +KEM SDIVRIALESETK++KKKLLEEFVWAVYCNGRKVGY IRRKQM DDEL+VMQ LRGVSMGAGVLP ++ K+++DGE+TY+R RFERVVGSKDSEA YMINPD A PE SIFF R Sbjct: 14 MFKLFPMLTSGCKMVALLGRPRKPLLKDHATTGTIFGYRKGRVSLAIQEDPHCAPMFVIELPMHSSLFHKEMASDIVRIALESETKTHKKKLLEEFVWAVYCNGRKVGYCIRRKQMSDDELHVMQLLRGVSMGAGVLP-CPNNEKESADGELTYIRARFERVVGSKDSEALYMINPD--GAAGPELSIFFAR 202
BLAST of Ca_01525 vs. TrEMBL
Match: B9GNY5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_644155 PE=4 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 2.553e-78 Identity = 153/194 (78.87%), Postives = 171/194 (88.14%), Query Frame = 1 Query: 1 MFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGTIFGYRKGRVSLAIQEDTRQMPIFLIELPMLTSALNKEMGSDIVRIALESETKSNKKKLLEEFVWAVYCNGRKVGYSIRRKQMGDDELYVMQHLRGVSMGAGVLPTTSDHNKDTSDGEMTYMRGRFERVVGSKDSEAFYMINPDNIAAQAPEFSIFFVRSQ 582 MFKLFPMLTSGCKMVALLGRPRK +LKD+ATTGTIFGYRKGRVSLAIQED +P F+IELPM +S +KEM SDIVRIALESETK++KKKLLEEFVWAVYCNGRKVGYSIRRKQM DDEL+VMQ LRGVSMGAGVLP ++ K+++DGE+TY+R RFERVVGSKDSEA YMINPD A PE SIFFVR++ Sbjct: 40 MFKLFPMLTSGCKMVALLGRPRKALLKDNATTGTIFGYRKGRVSLAIQEDPHCVPRFVIELPMHSSLFHKEMASDIVRIALESETKTHKKKLLEEFVWAVYCNGRKVGYSIRRKQMSDDELHVMQLLRGVSMGAGVLP-CPNNVKESADGELTYIRARFERVVGSKDSEALYMINPD--GAAGPELSIFFVRAR 230
BLAST of Ca_01525 vs. DB:Swiss
Match: MIZ1_ARATH (Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana OX=3702 GN=MIZ1 PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.829e-43 Identity = 78/169 (46.15%), Postives = 109/169 (64.50%), Query Frame = 1 Query: 94 TGTIFGYRKGRVSLAIQEDTRQMPIFLIELPMLTSALNKEMGSDIVRIALESETKS-NKKKLLEEFVWAVYCNGRKVGYSIRR-KQMGDDELYVMQHLRGVSMGAGVLPT------TSDHNKDTSDGEMTYMRGRFERVVGSKDSEAFYMINPDNIAAQAPEFSIFFVR 576 TGT++G+++G V+ ++Q + R P+ L++L M T+ L KEM S +VRIALE E + + KL +E W +YCNGRK GY++ R D + V+ + V++GAGV+PT S T GE+ YMRG+FERVVGS+DSEAFYM+NPD PE SIF +R Sbjct: 130 TGTLYGHKRGHVTFSVQYNQRSDPVLLLDLAMSTATLVKEMSSGLVRIALECEKRHRSGTKLFQEPKWTMYCNGRKCGYAVSRGGACTDTDWRVLNTVSRVTVGAGVIPTPKTIDDVSGVGSGTELGELLYMRGKFERVVGSRDSEAFYMMNPDKNG--GPELSIFLLR 296 The following BLAST results are available for this feature:
BLAST of Ca_01525 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot) Total hits: 1
BLAST of Ca_01525 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_01525 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 1
Expression
Available Analyses Select an Expression Analysis Select a property to group and sort biological samples Select a property to color biological samples Hover the mouse over a column in the graph to view more information about that biological sample. You can click and drag to rearrange groups along the x-axis. You can also click and drag to move the legend. InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_01525_v1.0_kabuli ID=Ca_01525_v1.0_kabuli; Name=Ca_01525; organism=Cicer arietinum; type=mRNA; length=585bpback to top protein sequence of Ca_01525_v1.0_kabuli >Ca_01525_v1.0_kabuli ID=Ca_01525_v1.0_kabuli; Name=Ca_01525_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=194bpback to top mRNA from alignment at Ca5:36943829..36944413+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_01525_v1.0_kabuli ID=Ca_01525_v1.0_kabuli; Name=Ca_01525; organism=Cicer arietinum; type=mRNA; length=585bp; location=Sequence derived from: Ca5:36943829..36944413+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:36943829..36944413+ >Ca_01525_v1.0_kabuli ID=Ca_01525_v1.0_kabuli; Name=Ca_01525; organism=Cicer arietinum; type=CDS; length=585bp; location=Sequence derived from: Ca5:36943829..36944413+ (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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