Ca_01530, Ca_01530_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_01530 vs. TrEMBL
Match: G7J6A4_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g101380 PE=4 SV=1) HSP 1 Score: 363.229 bits (931), Expect = 2.751e-98 Identity = 173/196 (88.27%), Postives = 187/196 (95.41%), Query Frame = 1 Query: 25 KLKGVRTNSRFLGVSVFKQPCPRPSHVEEWELPYLHYPEPKTYNREECSCNPVRYFCIMSMQRSGSGWFETFLNSHTNVSSNGEIFSVGKRRENVSLILKTIDEVYNLDWFTSASKNECSAAVGFKWMLNQ---GLMEHHKEIVEYLEQRKVSTIFLFRRNLLRRMVSVLANSYDKDVKLLNGTHKSHVHSTMEVS 603 +LKGVRT S+FLGVSVF QPCP PS+V+EWE+PYLHYPEPKTY+REECSCNPVRYFCI+SMQRSGSGWFETFLNSH NVSSNGEIFSV KRRENVSLILKTI+EVYNLDWFTSASKNECSAA+G+KWMLNQ GLM+HHKEIVEYLEQ++VSTIFLFRRNLLRRMVSVLANSYDKDVKLLNGTHKSHVHSTME + Sbjct: 89 ELKGVRTYSKFLGVSVFTQPCPHPSNVQEWEIPYLHYPEPKTYSREECSCNPVRYFCIVSMQRSGSGWFETFLNSHINVSSNGEIFSVEKRRENVSLILKTINEVYNLDWFTSASKNECSAAIGYKWMLNQVGRGLMDHHKEIVEYLEQKQVSTIFLFRRNLLRRMVSVLANSYDKDVKLLNGTHKSHVHSTMEAT 284
BLAST of Ca_01530 vs. TrEMBL
Match: I1JTH7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 3.155e-86 Identity = 151/197 (76.65%), Postives = 172/197 (87.31%), Query Frame = 1 Query: 31 KGVRTNSRFLGVSVFKQPCPRPSHVEEWELPYLHYPEPKTYNREECSCNPVRYFCIMSMQRSGSGWFETFLNSHTNVSSNGEIFSVGKRRENVSLILKTIDEVYNLDWFTSASKNECSAAVGFKWMLNQGLMEHHKEIVEYLEQRKVSTIFLFRRNLLRRMVSVLANSYDKDVKLLNGTHKSHVHSTMEVSDFLLFR 621 KGV T+++ ++VFKQPC S VEEWEL YLHYPEPK Y+REEC+CNPV +FCI+SMQRSGSGWFETFLNSH NVSSNGEIFSVGKRR NVS IL+T+D VYNLDWF+SASKNEC+AAVGFKWMLNQGL+EHH+EIVEY E+R+VS IFLFRRNLLRRM+SVLANSYDKD K LNGTHKSHVHS +E + +R Sbjct: 42 KGVHTSAKLFDITVFKQPCFNHSGVEEWELSYLHYPEPKIYSREECACNPVLFFCIVSMQRSGSGWFETFLNSHINVSSNGEIFSVGKRRANVSSILETMDRVYNLDWFSSASKNECTAAVGFKWMLNQGLVEHHEEIVEYFERRRVSVIFLFRRNLLRRMISVLANSYDKDAKPLNGTHKSHVHSAVEANILAKYR 238
BLAST of Ca_01530 vs. TrEMBL
Match: I1MXR2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 314.309 bits (804), Expect = 1.465e-83 Identity = 150/200 (75.00%), Postives = 169/200 (84.50%), Query Frame = 1 Query: 22 QKLKGVRTNSRFLGVSVFKQPCPRPSHVEEWELPYLHYPEPKTYNREECSCNPVRYFCIMSMQRSGSGWFETFLNSHTNVSSNGEIFSVGKRRENVSLILKTIDEVYNLDWFTSASKNECSAAVGFKWMLNQGLMEHHKEIVEYLEQRKVSTIFLFRRNLLRRMVSVLANSYDKDVKLLNGTHKSHVHSTMEVSDFLLFR 621 +K +RTNS+ L + V Q C PS VEEWE+P+LHYP+PKTYNREEC+CNPVR+F I++MQRSGSGWFET LNSH NVSSNGEIFSV KRRENVS IL T+DEV+NLDWF+ ASKNECSAAVG+KWMLNQGLMEHHKEI EY E+R+VSTIFLFRRNLLRRMVSVL NSYDK K LNGTHKSHVHST+E +R Sbjct: 46 EKPTRIRTNSKLLELRVINQSC-HPSSVEEWEVPFLHYPQPKTYNREECACNPVRFFVILTMQRSGSGWFETLLNSHMNVSSNGEIFSVAKRRENVSSILMTMDEVFNLDWFSGASKNECSAAVGYKWMLNQGLMEHHKEIGEYFERRRVSTIFLFRRNLLRRMVSVLENSYDKKAKPLNGTHKSHVHSTLEAGILAKYR 244
BLAST of Ca_01530 vs. TrEMBL
Match: I1M8J8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 313.153 bits (801), Expect = 3.265e-83 Identity = 150/200 (75.00%), Postives = 171/200 (85.50%), Query Frame = 1 Query: 22 QKLKGVRTNSRFLGVSVFKQPCPRPSHVEEWELPYLHYPEPKTYNREECSCNPVRYFCIMSMQRSGSGWFETFLNSHTNVSSNGEIFSVGKRRENVSLILKTIDEVYNLDWFTSASKNECSAAVGFKWMLNQGLMEHHKEIVEYLEQRKVSTIFLFRRNLLRRMVSVLANSYDKDVKLLNGTHKSHVHSTMEVSDFLLFR 621 +K +R NS+ L + V Q C + S+VEEWE+P+LHYP+PKTYNREEC+CNPVR+F I++MQRSGSGWFET LNSH NVSSNGEIF V KRRENVS ILKT+D V+NLDWF+ ASKNECSAAVG+KWMLNQGLMEHHKEIVEY E+RKVSTIFLFRRNLLRRMVSVLANSYDK+ K LNGTHKSHVHST+E +R Sbjct: 46 EKPARIRANSKLLELRVINQSC-QLSNVEEWEVPFLHYPQPKTYNREECACNPVRFFTILTMQRSGSGWFETLLNSHMNVSSNGEIFGVVKRRENVSSILKTMDVVFNLDWFSGASKNECSAAVGYKWMLNQGLMEHHKEIVEYFERRKVSTIFLFRRNLLRRMVSVLANSYDKNAKPLNGTHKSHVHSTLEAGILAKYR 244
BLAST of Ca_01530 vs. TrEMBL
Match: M4D9D6_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra013096 PE=4 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 2.587e-80 Identity = 140/188 (74.47%), Postives = 163/188 (86.70%), Query Frame = 1 Query: 34 GVRTNSRFLGVSVFKQPCPRPSHVEEWELPYLHYPEPKTYNREECSCNPVRYFCIMSMQRSGSGWFETFLNSHTNVSSNGEIFSVGKRRENVSLILKTIDEVYNLDWFTSASKNECSAAVGFKWMLNQGLMEHHKEIVEYLEQRKVSTIFLFRRNLLRRMVSVLANSYDKDVKLLNGTHKSHVHSTME 597 GV ++ FL V VF++PCP P+ +E W++PY+HYP+PKTY REECSCNPVRYF I+SMQRSGSGWFET LN+HTN+SSNGEIFSV RR NVS I +T+D+VYNLDW +SASKNEC++AVG KWMLNQGLM+HH+EIVEY + R VS IFLFRRNLLRRM+SVLANSYDKD KLLNGTHKSHVHS E Sbjct: 49 GVVPSAGFLNVEVFEKPCPEPN-IEPWDIPYVHYPKPKTYKREECSCNPVRYFAILSMQRSGSGWFETLLNNHTNISSNGEIFSVKDRRANVSTIFETLDKVYNLDWLSSASKNECTSAVGLKWMLNQGLMKHHEEIVEYFKTRGVSAIFLFRRNLLRRMISVLANSYDKDAKLLNGTHKSHVHSPKE 235
BLAST of Ca_01530 vs. TrEMBL
Match: R0GWR5_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10005172mg PE=4 SV=1) HSP 1 Score: 301.597 bits (771), Expect = 9.829e-80 Identity = 137/188 (72.87%), Postives = 163/188 (86.70%), Query Frame = 1 Query: 34 GVRTNSRFLGVSVFKQPCPRPSHVEEWELPYLHYPEPKTYNREECSCNPVRYFCIMSMQRSGSGWFETFLNSHTNVSSNGEIFSVGKRRENVSLILKTIDEVYNLDWFTSASKNECSAAVGFKWMLNQGLMEHHKEIVEYLEQRKVSTIFLFRRNLLRRMVSVLANSYDKDVKLLNGTHKSHVHSTME 597 GV N FL V VF++PCP P+ +E W++P++HYP+PKTYNR+ECSC+PVRYF I+SMQRSGSGWFET LN+HTN+SSNGEIFSV RR NVS I +T+D+VYNLDW +SASKNEC++AVGFKWMLNQGLM+HH+EIVEY + R VS IFLFR+NLLRRM+SVLANSYD+D KLLNGTHKSH HS E Sbjct: 23 GVSPNYGFLNVEVFERPCPEPN-IEPWDIPFVHYPKPKTYNRDECSCHPVRYFAILSMQRSGSGWFETLLNNHTNISSNGEIFSVKDRRANVSTIFETLDKVYNLDWLSSASKNECTSAVGFKWMLNQGLMKHHEEIVEYFKTRGVSAIFLFRKNLLRRMISVLANSYDRDAKLLNGTHKSHTHSAKE 209
BLAST of Ca_01530 vs. TrEMBL
Match: R0F1T1_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10005172mg PE=4 SV=1) HSP 1 Score: 301.597 bits (771), Expect = 9.829e-80 Identity = 137/188 (72.87%), Postives = 163/188 (86.70%), Query Frame = 1 Query: 34 GVRTNSRFLGVSVFKQPCPRPSHVEEWELPYLHYPEPKTYNREECSCNPVRYFCIMSMQRSGSGWFETFLNSHTNVSSNGEIFSVGKRRENVSLILKTIDEVYNLDWFTSASKNECSAAVGFKWMLNQGLMEHHKEIVEYLEQRKVSTIFLFRRNLLRRMVSVLANSYDKDVKLLNGTHKSHVHSTME 597 GV N FL V VF++PCP P+ +E W++P++HYP+PKTYNR+ECSC+PVRYF I+SMQRSGSGWFET LN+HTN+SSNGEIFSV RR NVS I +T+D+VYNLDW +SASKNEC++AVGFKWMLNQGLM+HH+EIVEY + R VS IFLFR+NLLRRM+SVLANSYD+D KLLNGTHKSH HS E Sbjct: 49 GVSPNYGFLNVEVFERPCPEPN-IEPWDIPFVHYPKPKTYNRDECSCHPVRYFAILSMQRSGSGWFETLLNNHTNISSNGEIFSVKDRRANVSTIFETLDKVYNLDWLSSASKNECTSAVGFKWMLNQGLMKHHEEIVEYFKTRGVSAIFLFRKNLLRRMISVLANSYDRDAKLLNGTHKSHTHSAKE 235
BLAST of Ca_01530 vs. TrEMBL
Match: F4JKP9_ARATH (P-loop containing nucleoside triphosphate hydrolase family protein-like protein OS=Arabidopsis thaliana GN=AT4G34420 PE=4 SV=1) HSP 1 Score: 301.597 bits (771), Expect = 9.829e-80 Identity = 137/188 (72.87%), Postives = 163/188 (86.70%), Query Frame = 1 Query: 34 GVRTNSRFLGVSVFKQPCPRPSHVEEWELPYLHYPEPKTYNREECSCNPVRYFCIMSMQRSGSGWFETFLNSHTNVSSNGEIFSVGKRRENVSLILKTIDEVYNLDWFTSASKNECSAAVGFKWMLNQGLMEHHKEIVEYLEQRKVSTIFLFRRNLLRRMVSVLANSYDKDVKLLNGTHKSHVHSTME 597 GV N FL V VF++PCP P+ +E W++P++HYP+PKTYNR+ECSC+PVRYF I+SMQRSGSGWFET LN+HTN+SSNGEIFSV RR NVS I +T+D+VYNLDW +SASKNEC++AVGFKWMLNQGLM+HH+EIVEY + R VS IFLFR+NLLRRM+SVLANSYD+D KLLNGTHKSH HS E Sbjct: 49 GVSPNYGFLNVEVFERPCPEPN-IEPWDIPFVHYPKPKTYNRDECSCHPVRYFAILSMQRSGSGWFETLLNNHTNISSNGEIFSVKDRRANVSTIFETLDKVYNLDWLSSASKNECTSAVGFKWMLNQGLMKHHEEIVEYFKTRGVSAIFLFRKNLLRRMISVLANSYDRDAKLLNGTHKSHTHSAKE 235
BLAST of Ca_01530 vs. TrEMBL
Match: M4DFF9_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra015232 PE=4 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 1.284e-79 Identity = 138/188 (73.40%), Postives = 163/188 (86.70%), Query Frame = 1 Query: 34 GVRTNSRFLGVSVFKQPCPRPSHVEEWELPYLHYPEPKTYNREECSCNPVRYFCIMSMQRSGSGWFETFLNSHTNVSSNGEIFSVGKRRENVSLILKTIDEVYNLDWFTSASKNECSAAVGFKWMLNQGLMEHHKEIVEYLEQRKVSTIFLFRRNLLRRMVSVLANSYDKDVKLLNGTHKSHVHSTME 597 GV ++ FL V VF++PCP P+ +E W++PY+HYP+PKTY+REECSCNPVRYF I+SMQRSGSGWFET LN+HTN+SSNGEIFSV RR NVS I +T+D+VYNLDW +SASKNEC++AVG KWMLNQGLM+HH+EIVEY + R VS IFLFRRNLLRRM+SVLANSYD+D KLLNGTHKSH HS E Sbjct: 49 GVVPSAGFLNVEVFERPCPEPN-IEPWDIPYVHYPKPKTYSREECSCNPVRYFAILSMQRSGSGWFETLLNNHTNISSNGEIFSVKDRRANVSTIFETLDKVYNLDWLSSASKNECTSAVGLKWMLNQGLMKHHEEIVEYFKTRGVSAIFLFRRNLLRRMISVLANSYDRDAKLLNGTHKSHTHSPKE 235
BLAST of Ca_01530 vs. TrEMBL
Match: B9N4W4_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_267800 PE=4 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 1.284e-79 Identity = 138/197 (70.05%), Postives = 163/197 (82.74%), Query Frame = 1 Query: 34 GVRTNSRFLGVSVFKQPCPRPSHVEEWELPYLHYPEPKTYNREECSCNPVRYFCIMSMQRSGSGWFETFLNSHTNVSSNGEIFSVGKRRENVSLILKTIDEVYNLDWFTSASKNECSAAVGFKWMLNQGLMEHHKEIVEYLEQRKVSTIFLFRRNLLRRMVSVLANSYDKDVKLLNGTHKSHVHSTMEVSDFLLFRS 624 G+RTN FL V V ++PCP P+ +E WE+PY+HYP PKTY+R EC CNPVRYF I+SMQRSGSGWFET LN+HTN+SSNGEIFSV RR NVS I +T+D++YNLDW +SASKNEC+AAVG KWMLNQG+M HH+EIVEY + R VS IFLFRRNLLRRM+S+LANSYD+DVK LNGTHKSHVHS E ++S Sbjct: 40 GIRTNPGFLNVEVIERPCPEPN-IEPWEIPYVHYPRPKTYSRAECKCNPVRYFAILSMQRSGSGWFETLLNNHTNISSNGEIFSVKVRRSNVSTITETLDKIYNLDWSSSASKNECTAAVGLKWMLNQGVMRHHEEIVEYFKTRGVSAIFLFRRNLLRRMISILANSYDRDVKPLNGTHKSHVHSPREAEILAKYKS 235 The following BLAST results are available for this feature:
BLAST of Ca_01530 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_01530 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_01530_v1.0_kabuli ID=Ca_01530_v1.0_kabuli; Name=Ca_01530; organism=Cicer arietinum; type=mRNA; length=630bpback to top protein sequence of Ca_01530_v1.0_kabuli >Ca_01530_v1.0_kabuli ID=Ca_01530_v1.0_kabuli; Name=Ca_01530_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=209bpback to top mRNA from alignment at Ca5:36898777..36900507+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_01530_v1.0_kabuli ID=Ca_01530_v1.0_kabuli; Name=Ca_01530; organism=Cicer arietinum; type=mRNA; length=1731bp; location=Sequence derived from: Ca5:36898777..36900507+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:36898777..36900507+ >Ca_01530_v1.0_kabuli ID=Ca_01530_v1.0_kabuli; Name=Ca_01530; organism=Cicer arietinum; type=CDS; length=630bp; location=Sequence derived from: Ca5:36898777..36900507+ (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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