Ca_01663, Ca_01663_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_01663 vs. TrEMBL
Match: G7J8F1_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_3g105050 PE=2 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 7.159e-72 Identity = 151/230 (65.65%), Postives = 167/230 (72.61%), Query Frame = 1 Query: 4 ASAVTPAHVSNI-KPLQCSSRKAKRCVRCEVS-APSWREGRRTVXXXXXXXXXXXXPNRAAAEGSFMDKYVKRKKLDPLEAYVPAVILTQFQIKDLEKTLEGNEPQFALCRSFLRSGPAASLRINIRAVAQYASDSGNGKTAFNSVDXXXXXXXXXXXXXXXXXXNDPEXXXXXXXXXXXXXLIALDSLLQTVPSDVLSKGKVVADSYLDREEVETESSDPDLKQLESIL 687 +S V+PAHVS KPL C S R V+CE+S +PSW+EGRR V PNRA AEGS MDKYVKRKKL+PLE YVPAVILTQFQIKDLEKTLEGN+PQF+LCRS LRSGPAASLR+NIRAVAQYASDSGNGKTA N+VD NDP+ LIALDSLLQTVPSDVLSKG+V+ADSYLDRE+VETE+ DP LKQLESIL Sbjct: 4 SSVVSPAHVSKYSKPLHCCS---SRKVKCELSPSPSWKEGRRMVSISLVLSHFLLFPNRATAEGSIMDKYVKRKKLEPLETYVPAVILTQFQIKDLEKTLEGNDPQFSLCRSLLRSGPAASLRVNIRAVAQYASDSGNGKTALNNVDDCLRSLEDLDSLLLRASRNDPDASVKSMMAKVSSALIALDSLLQTVPSDVLSKGRVIADSYLDREDVETENLDPGLKQLESIL 230
BLAST of Ca_01663 vs. TrEMBL
Match: I1K8G2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 9.676e-69 Identity = 152/230 (66.09%), Postives = 159/230 (69.13%), Query Frame = 1 Query: 1 MASAVTPAHVS-NIKPLQCSSRKAKRCVRCEVSAPSWREGRRTVXXXXXXXXXXXXPNRAAAEGSFMDKYVKRKKLDPLEAYVPAVILTQFQIKDLEKTLEGNEPQFALCRSFLRSGPAASLRINIRAVAQYASDSGNGKTAFNSVDXXXXXXXXXXXXXXXXXXNDPEXXXXXXXXXXXXXLIALDSLLQTVPSDVLSKGKVVADSYLDREEVETESSDPDLKQLESIL 687 MAS TPAHVS N KPL S KAKR VRC VS P+WREGRRTV PNR A S DKYVKRKKLDPLE Y+PAVILT+FQIKDLEKTLE EPQFALCRS LRSGPAASLR+NIRAVAQYASDSGNGKTAFN VD NDPE L ALDSLLQTVPSDVLSKGKV+ADSY + E+ ET S DPDLKQLESIL Sbjct: 1 MASLGTPAHVSSNKKPLHRWSWKAKR-VRCAVSPPTWREGRRTVSLSLVLSHLLLIPNRDTALASPFDKYVKRKKLDPLEVYIPAVILTEFQIKDLEKTLEDEEPQFALCRSLLRSGPAASLRVNIRAVAQYASDSGNGKTAFNDVDECLRSLEELDSLLLHASRNDPEASVKSMKAKINSALGALDSLLQTVPSDVLSKGKVIADSYREPEDEETGSLDPDLKQLESIL 229
BLAST of Ca_01663 vs. TrEMBL
Match: G7J8F2_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g105050 PE=4 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 2.166e-52 Identity = 111/157 (70.70%), Postives = 121/157 (77.07%), Query Frame = 1 Query: 217 KKLDPLEAYVPAVILTQFQIKDLEKTLEGNEPQFALCRSFLRSGPAASLRINIRAVAQYASDSGNGKTAFNSVDXXXXXXXXXXXXXXXXXXNDPEXXXXXXXXXXXXXLIALDSLLQTVPSDVLSKGKVVADSYLDREEVETESSDPDLKQLESIL 687 KKL+PLE YVPAVILTQFQIKDLEKTLEGN+PQF+LCRS LRSGPAASLR+NIRAVAQYASDSGNGKTA N+VD NDP+ LIALDSLLQTVPSDVLSKG+V+ADSYLDRE+VETE+ DP LKQLESIL Sbjct: 5 KKLEPLETYVPAVILTQFQIKDLEKTLEGNDPQFSLCRSLLRSGPAASLRVNIRAVAQYASDSGNGKTALNNVDDCLRSLEDLDSLLLRASRNDPDASVKSMMAKVSSALIALDSLLQTVPSDVLSKGRVIADSYLDREDVETENLDPGLKQLESIL 161
BLAST of Ca_01663 vs. TrEMBL
Match: F8WLC9_CITUN (Putative uncharacterized protein ORF62 OS=Citrus unshiu GN=ORF62 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.041e-46 Identity = 115/243 (47.33%), Postives = 142/243 (58.44%), Query Frame = 1 Query: 1 MASAVTPAHVSN-----------IKPLQCSSRKAKRCVRCEVSAPSWREGRRT-VXXXXXXXXXXXXPN-RAAAEGSFMDKYVKRKKLDPLEAYVPAVILTQFQIKDLEKTLEGNEPQFALCRSFLRSGPAASLRINIRAVAQYASDSGNGKTAFNSVDXXXXXXXXXXXXXXXXXXNDPEXXXXXXXXXXXXXLIALDSLLQTVPSDVLSKGKVVADSYLDR-EEVETESSDPDLKQLESIL 687 MA+ PAH S + P + + VRC +S +WRE RR V PN A GS DKYVK+KKLDPLE Y+P VILTQ QIKDLEKTL+ ++P++A CRS LRSGPAASLR+NIRAVAQYASD+GNGK A + VD N+ + L ALDSLLQTVP+DVL+KGK +AD+Y ++ E + SDP++KQLESIL Sbjct: 87 MATLNAPAHFSTSPCTYSTIPRYLSPNCTTKTNRSQRVRCALSPSNWRESRRRLVSFSLALSQLLFLPNTNNATAGSLWDKYVKKKKLDPLEVYIPPVILTQLQIKDLEKTLDVDKPEYANCRSLLRSGPAASLRVNIRAVAQYASDAGNGKMASDDVDQCLRALEDLDSLFLRASRNEGKTSIKTMKAKIDTALNALDSLLQTVPADVLTKGKAIADAYRSADDDTEAQVSDPEIKQLESIL 329
BLAST of Ca_01663 vs. TrEMBL
Match: D7STX4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g01900 PE=4 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 8.813e-46 Identity = 102/171 (59.65%), Postives = 118/171 (69.01%), Query Frame = 1 Query: 178 AAEGSFMDKYVKRKKLDPLEAYVPAVILTQFQIKDLEKTLEGNEPQFALCRSFLRSGPAASLRINIRAVAQYASDSGNGKTAFNSVDXXXXXXXXXXXXXXXXXXNDPEXXXXXXXXXXXXXLIALDSLLQTVPSDVLSKGKVVADSY-LDREEVETESSDPDLKQLESIL 687 A G+ DKYVKRKKLDPL+AYVPA+ILTQ QIKDL KTLE ++PQ+A CRS LR GPAASLR+NIRAVAQYASDSGNGKTAFN VD ++P L ALDSLLQTVPSD+L KGK +AD+Y E+ + E+ DPD+KQLESIL Sbjct: 12 ALAGNIFDKYVKRKKLDPLDAYVPAIILTQLQIKDLVKTLEVDQPQYAACRSLLRYGPAASLRVNIRAVAQYASDSGNGKTAFNDVDQCLRALEELDSLLLQASRSNPGASVETMKAKIGVALDALDSLLQTVPSDILDKGKAIADAYRTPDEDADPENLDPDMKQLESIL 182
BLAST of Ca_01663 vs. TrEMBL
Match: D7LDF7_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_320426 PE=4 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.610e-39 Identity = 101/228 (44.30%), Postives = 124/228 (54.39%), Query Frame = 1 Query: 13 VTPAHVSNIKPLQCSSRKAKRCVRCEVSAPSWREGRRTVXXXXXXXXXXXXPNRAAAEGSFMDKYVKRKKLDPLEAYVPAVILTQFQIKDLEKTLEGNEPQFALCRSFLRSGPAASLRINIRAVAQYASDSGNGKTAFNSVDXXXXXXXXXXXXXXXXXXNDPEXXXXXXXXXXXXXLIALDSLLQTVPSDVLSKGKVVADSYLDREEVETESSD---PDLKQLESIL 687 +T H + PL+ + + K +S P W++ RR + P+ A A GS MDKYVKRKKLDPLEAYVP VIL Q QI+DLE+ L +P+F CR LRSGPA+SLR+NIRAVAQYASD G KTA + VD D L ALDSLLQTVP+ VL KGK + + Y E E S D ++KQL+SIL Sbjct: 1 MTSLHATVSLPLRHNPNRKKLTCAATLSPPPWKQSRRVISVSFFLSRLLLLPHDAMA-GSLMDKYVKRKKLDPLEAYVPPVILAQLQIQDLEEFLNVEKPEFEACRRQLRSGPASSLRVNIRAVAQYASDDGFSKTATDDVDRCLRALEELDSLFLRASRKDSNATVELMKSQLGTALTALDSLLQTVPAQVLDKGKAMVEVYRSASEQEAGSDDLESSEIKQLQSIL 227
BLAST of Ca_01663 vs. TrEMBL
Match: R0HUI6_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10023913mg PE=4 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 7.990e-39 Identity = 100/225 (44.44%), Postives = 125/225 (55.56%), Query Frame = 1 Query: 16 TPAHVSNIKPLQCSSRKAKRCVRCEVSAPSWREGRRTVXXXXXXXXXXXXPNRAAAEGSFMDKYVKRKKLDPLEAYVPAVILTQFQIKDLEKTLEGNEPQFALCRSFLRSGPAASLRINIRAVAQYASDSGNGKTAFNSVDXXXXXXXXXXXXXXXXXXNDPEXXXXXXXXXXXXXLIALDSLLQTVPSDVLSKGKVVADSYLDREEVETESSD-PDLKQLESIL 687 TP ++ ++ CS R C +S P W++ RR + PN A A GS +DKYVKRKKLDPLEAYVP VIL Q QI+DLE L +P+F CR LRSGPA+SLR+NIRAVAQYASD G KTA + VD D + L ALDSLLQTVPS VL +GK + + Y E + + SD +++QL+SIL Sbjct: 31 TPTSLTTLR--HCSHRTKLTCA-ATLSPPPWKQSRRVISVSFFLSRLLLFPNDAMA-GSLIDKYVKRKKLDPLEAYVPPVILAQLQIQDLEGFLNEEKPEFEACRRQLRSGPASSLRVNIRAVAQYASDDGFSKTATDDVDRCLRALEELDSLFLRASRKDSKATVELMKSQLGTALTALDSLLQTVPSQVLDRGKAMVEVYRSASEQDADVSDSSEIQQLQSIL 251
BLAST of Ca_01663 vs. TrEMBL
Match: F4IUJ0_ARATH (Uncharacterized protein OS=Arabidopsis thaliana GN=AT2G26340 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 3.036e-38 Identity = 101/232 (43.53%), Postives = 122/232 (52.59%), Query Frame = 1 Query: 7 SAVTPAHVSNIKPLQCSSRKAKRCVRCEVSAPSWREGRRTVXXXXXXXXXXXXPNRAAAEGSF--MDKYVKRKKLDPLEAYVPAVILTQFQIKDLEKTLEGNEPQFALCRSFLRSGPAASLRINIRAVAQYASDSGNGKTAFNSVDXXXXXXXXXXXXXXXXXXNDPEXXXXXXXXXXXXXLIALDSLLQTVPSDVLSKGKVVADSYLDREEVETESSD---PDLKQLESIL 687 S ++ H + PL +S K +S P W++ RR + PN A A G +DKYVKRKKLDPLEAYVP VIL Q QI+DLE L +P+F CR LRSGPA+SLR+NIRAVAQYASD G KTA + VD D L ALDSLLQTVPS VL KGK + + Y E + S D ++KQL+SIL Sbjct: 22 SPMSSLHATVSLPLFSNSNHKKLTCAATLSPPPWKQSRRVISVSFFLSRLLLLPNDAMAGGLMDKLDKYVKRKKLDPLEAYVPPVILAQLQIQDLEGFLNVEKPEFEACRRQLRSGPASSLRVNIRAVAQYASDDGFSKTATDDVDRCLRALEELDSLFLRASRKDSNATVVLMKSQLGTALTALDSLLQTVPSQVLDKGKAMVEVYRSASEEDAGSDDLESSEIKQLQSIL 253
BLAST of Ca_01663 vs. TrEMBL
Match: B9HD08_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_819455 PE=4 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 3.965e-38 Identity = 115/282 (40.78%), Postives = 140/282 (49.65%), Query Frame = 1 Query: 7 SAVTPAH--VSNIKP-LQCSSRKAKRCVRCEVSAPS--WR-EGRRTVXXXXXXXXXXXXPNRAAAEGSFMDKYVKRKKLDPLEAYVPAVILTQFQIKDLEKTLEGNEPQFALCRSFLRSGPAASLRINIRA------------------------------------------------VAQYASDSGNGKTAFNSVDXXXXXXXXXXXXXXXXXXNDPEXXXXXXXXXXXXXLIALDSLLQTVPSDVLSKGKVVADSY-LDREEVETESSDPDLKQLESIL 687 S+ P H +S+ KP ++ R RC S+ + W+ + RR++ A GSF D YVKRKKLDPLEAYVPAVILT+ QIKDLEK L+ ++PQF RS LRSGPAASLR+NIRA VAQYASD+GNG AFN+VD N+P+ L A++SLLQTVPSDVL KGK VAD+Y E+ E E DP+LKQLESIL Sbjct: 39 SSALPYHFSLSSSKPNIRSGGRGVIRCCALMSSSTTSKWQGQSRRSLLSNSLLLSHFLFVPNDAIAGSFFDNYVKRKKLDPLEAYVPAVILTELQIKDLEKILDVDQPQFGNYRSLLRSGPAASLRVNIRARWSDNICIIDLKLRGYLIQLDGSGSIAIGVSCYCSVNFFVVSLNAPAIVAQYASDAGNGNAAFNNVDQCLSALEELDSLLLRASRNEPDASVKSMKAKVGIALAAMESLLQTVPSDVLDKGKAVADAYRTPDEDSEAEILDPELKQLESIL 320
BLAST of Ca_01663 vs. TrEMBL
Match: O48702_ARATH (Expressed protein OS=Arabidopsis thaliana GN=At2g26340 PE=2 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 6.764e-38 Identity = 100/226 (44.25%), Postives = 119/226 (52.65%), Query Frame = 1 Query: 25 HVSNIKPLQCSSRKAKRCVRCEVSAPSWREGRRTVXXXXXXXXXXXXPNRAAAEGSF--MDKYVKRKKLDPLEAYVPAVILTQFQIKDLEKTLEGNEPQFALCRSFLRSGPAASLRINIRAVAQYASDSGNGKTAFNSVDXXXXXXXXXXXXXXXXXXNDPEXXXXXXXXXXXXXLIALDSLLQTVPSDVLSKGKVVADSYLDREEVETESSD---PDLKQLESIL 687 H + PL +S K +S P W++ RR + PN A A G +DKYVKRKKLDPLEAYVP VIL Q QI+DLE L +P+F CR LRSGPA+SLR+NIRAVAQYASD G KTA + VD D L ALDSLLQTVPS VL KGK + + Y E + S D ++KQL+SIL Sbjct: 5 HATVSLPLFSNSNHKKLTCAATLSPPPWKQSRRVISVSFFLSRLLLLPNDAMAGGLMDKLDKYVKRKKLDPLEAYVPPVILAQLQIQDLEGFLNVEKPEFEACRRQLRSGPASSLRVNIRAVAQYASDDGFSKTATDDVDRCLRALEELDSLFLRASRKDSNATVVLMKSQLGTALTALDSLLQTVPSQVLDKGKAMVEVYRSASEEDAGSDDLESSEIKQLQSIL 230 The following BLAST results are available for this feature:
BLAST of Ca_01663 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_01663 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
Expression
Available Analyses Select an Expression Analysis Select a property to group and sort biological samples Select a property to color biological samples Hover the mouse over a column in the graph to view more information about that biological sample. You can click and drag to rearrange groups along the x-axis. You can also click and drag to move the legend. InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_01663_v1.0_kabuli ID=Ca_01663_v1.0_kabuli; Name=Ca_01663; organism=Cicer arietinum; type=mRNA; length=690bpback to top protein sequence of Ca_01663_v1.0_kabuli >Ca_01663_v1.0_kabuli ID=Ca_01663_v1.0_kabuli; Name=Ca_01663_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=229bpback to top mRNA from alignment at Ca5:35680711..35683823+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_01663_v1.0_kabuli ID=Ca_01663_v1.0_kabuli; Name=Ca_01663; organism=Cicer arietinum; type=mRNA; length=3113bp; location=Sequence derived from: Ca5:35680711..35683823+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:35680711..35683823+ >Ca_01663_v1.0_kabuli ID=Ca_01663_v1.0_kabuli; Name=Ca_01663; organism=Cicer arietinum; type=CDS; length=690bp; location=Sequence derived from: Ca5:35680711..35683823+ (Cicer arietinumback to top |