Ca_01661, Ca_01661_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_01661 vs. TrEMBL
Match: G7J8E2_MEDTR (Ultraviolet-B-repressible protein OS=Medicago truncatula GN=MTR_3g104950 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 3.250e-49 Identity = 103/120 (85.83%), Postives = 111/120 (92.50%), Query Frame = 1 Query: 1 MASASVATALPLRSATQNSLKRPSSESFFRPLPVKQPKRVTHSKSKLEIHASLKQKAVTGLTAASLTASMVIPEVAHAAGSDLSPSLQNFLLSIFAGGAVLTAIFGAVFGVANFDPVKRA 360 MAS SVATALPL SATQN LK PSSESFFRPLP+ QPKR+T SKSK+EI+ASLK+KAVT +TAASLTASMVIP+VAHAAGSDLSPSLQNFLLSIFAGGAVLTAI GAV GV+NFDPVKRA Sbjct: 1 MASTSVATALPLGSATQNKLKNPSSESFFRPLPITQPKRITQSKSKVEINASLKEKAVTAITAASLTASMVIPDVAHAAGSDLSPSLQNFLLSIFAGGAVLTAILGAVIGVSNFDPVKRA 120
BLAST of Ca_01661 vs. TrEMBL
Match: I3S117_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 4.244e-49 Identity = 103/120 (85.83%), Postives = 110/120 (91.67%), Query Frame = 1 Query: 1 MASASVATALPLRSATQNSLKRPSSESFFRPLPVKQPKRVTHSKSKLEIHASLKQKAVTGLTAASLTASMVIPEVAHAAGSDLSPSLQNFLLSIFAGGAVLTAIFGAVFGVANFDPVKRA 360 MAS SVATALPL SATQN LK PSSESFFRPLP+ QPKR+T SKSK EI+ASLK+KAVT +TAASLTASMVIP+VAHAAGSDLSPSLQNFLLSIFAGGAVLTAI GAV GV+NFDPVKRA Sbjct: 1 MASTSVATALPLGSATQNKLKNPSSESFFRPLPITQPKRITQSKSKFEINASLKEKAVTAITAASLTASMVIPDVAHAAGSDLSPSLQNFLLSIFAGGAVLTAILGAVIGVSNFDPVKRA 120
BLAST of Ca_01661 vs. TrEMBL
Match: I3T9R5_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 9.807e-38 Identity = 88/123 (71.54%), Postives = 100/123 (81.30%), Query Frame = 1 Query: 1 MASASVATALPLRSATQNSLKRPSSESFFRPLPVKQPKRV---THSKSKLEIHASLKQKAVTGLTAASLTASMVIPEVAHAAGSDLSPSLQNFLLSIFAGGAVLTAIFGAVFGVANFDPVKRA 360 MASASV AL L S T N L PSS+SFF+PLP++Q K + SKSK IHASLK+KAV GLTAAS+TASMVIPEVA+AAG+DL+PSL+NFLLSI AGG VLTAIF AV GV+NFDPVKRA Sbjct: 1 MASASVPMALSLSSVTHNKLNNPSSQSFFQPLPIRQNKTLFAKPSSKSKHGIHASLKEKAVAGLTAASMTASMVIPEVANAAGNDLTPSLKNFLLSIAAGGVVLTAIFAAVIGVSNFDPVKRA 123
BLAST of Ca_01661 vs. TrEMBL
Match: I1JU06_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 4.867e-37 Identity = 87/124 (70.16%), Postives = 100/124 (80.65%), Query Frame = 1 Query: 1 MASASVATALPLRSATQNSLKRPSSESFFRPLPVKQPKRVTH-----SKSKLEIHASLKQKAVTGLTAASLTASMVIPEVAHAAGSDLSPSLQNFLLSIFAGGAVLTAIFGAVFGVANFDPVKR 357 MASASV AL L S T N+ +PSSE+FFRPLP++QPKR S SK +I+ASLK+KAV GLTAAS+TASMV+PEVAHAAG + SPSL+NFLLSIFAGG VL AIFGAV GV+NFDPVKR Sbjct: 1 MASASVPMALSLSSVTNNN--KPSSEAFFRPLPLRQPKRTLFTTKAVSNSKPQINASLKEKAVAGLTAASVTASMVVPEVAHAAGYEFSPSLKNFLLSIFAGGVVLAAIFGAVIGVSNFDPVKR 122
BLAST of Ca_01661 vs. TrEMBL
Match: C6SVA3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 6.357e-37 Identity = 87/124 (70.16%), Postives = 100/124 (80.65%), Query Frame = 1 Query: 1 MASASVATALPLRSATQNSLKRPSSESFFRPLPVKQPKRVTH-----SKSKLEIHASLKQKAVTGLTAASLTASMVIPEVAHAAGSDLSPSLQNFLLSIFAGGAVLTAIFGAVFGVANFDPVKR 357 MASASV AL L S T N+ +PSSE+FFRPLP++QPKR S SK +I+ASLK+KAV GLTAAS+TASMV+PEVAHAAG + SPSL+NFLLSIFAGG VL AIFGAV GV+NFDPVKR Sbjct: 1 MASASVPMALSLGSVTNNN--KPSSEAFFRPLPLRQPKRTLFTTKAVSNSKPQINASLKEKAVAGLTAASVTASMVVPEVAHAAGYEFSPSLKNFLLSIFAGGVVLAAIFGAVIGVSNFDPVKR 122
BLAST of Ca_01661 vs. TrEMBL
Match: I1K8F8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 7.028e-36 Identity = 85/124 (68.55%), Postives = 98/124 (79.03%), Query Frame = 1 Query: 1 MASASVATALPLRSATQNSLKRPSSESFFRPLPVKQPKRVTH-----SKSKLEIHASLKQKAVTGLTAASLTASMVIPEVAHAAGSDLSPSLQNFLLSIFAGGAVLTAIFGAVFGVANFDPVKR 357 MASASV A L S N+ +PSSE+FFRPLP++QPKR S SK +I+ASLK+KAV GLTAAS+TASMV+PEVAHAAG + SPSL+NFLLSIFAGG VL AIFGAV GV+NFDPVKR Sbjct: 1 MASASVPMAFSLSSVINNN--KPSSEAFFRPLPLRQPKRTLFTTKAVSNSKAQINASLKEKAVAGLTAASVTASMVVPEVAHAAGYEFSPSLKNFLLSIFAGGFVLVAIFGAVIGVSNFDPVKR 122
BLAST of Ca_01661 vs. TrEMBL
Match: C6TBW1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.566e-35 Identity = 84/124 (67.74%), Postives = 98/124 (79.03%), Query Frame = 1 Query: 1 MASASVATALPLRSATQNSLKRPSSESFFRPLPVKQPKRVTHS-----KSKLEIHASLKQKAVTGLTAASLTASMVIPEVAHAAGSDLSPSLQNFLLSIFAGGAVLTAIFGAVFGVANFDPVKR 357 MASASV A L S N+ +PSSE+FFRPLP++QPKR + SK +I+ASLK+KAV GLTAAS+TASMV+PEVAHAAG + SPSL+NFLLSIFAGG VL AIFGAV GV+NFDPVKR Sbjct: 1 MASASVPMAFSLSSVINNN--KPSSEAFFRPLPLRQPKRTLFTTKAVANSKAQINASLKEKAVAGLTAASVTASMVVPEVAHAAGYEFSPSLKNFLLSIFAGGFVLVAIFGAVIGVSNFDPVKR 122
BLAST of Ca_01661 vs. TrEMBL
Match: F8WLB5_CITUN (Putative uncharacterized protein ORF48 OS=Citrus unshiu GN=ORF48 PE=4 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.015e-34 Identity = 82/121 (67.77%), Postives = 96/121 (79.34%), Query Frame = 1 Query: 10 ASVATALPLRSATQNSLKRPSSESFFRPLPVKQPKRVTH-----SKSKLEIHASLKQKAVTGLTAASLTASMVIPEVAHAAGSDLSPSLQNFLLSIFAGGAVLTAIFGAVFGVANFDPVKR 357 ASV+ A+PL SATQN L +PSSESF +PLPV+ K S+++L++ ASLK+KAVTGLTAA+LTASMVIPEVA AAG LSPSL+NFLLSI AGG VL A+ GAV GVANFDPVKR Sbjct: 2 ASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKAVTGLTAAALTASMVIPEVAEAAGPGLSPSLKNFLLSIVAGGVVLAALVGAVIGVANFDPVKR 122
BLAST of Ca_01661 vs. TrEMBL
Match: B9RK19_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1045940 PE=4 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 2.261e-34 Identity = 84/123 (68.29%), Postives = 101/123 (82.11%), Query Frame = 1 Query: 1 MASAS-VATALPLRSATQNSLKRPSSESFFRPLPVKQPKRVTHSKS--KLEIHASLKQKAVTGLTAASLTASMVIPEVAHAAGSDLSPSLQNFLLSIFAGGAVLTAIFGAVFGVANFDPVKRA 360 MAS S V+ A+P+ SA+Q K PSSE+FF+PLP++Q K V SKS K ++ ASLK+KA+TGLTAA+LTASMVIPEVA AAGS +SPSL+NFLLSI AGG VLTAI GA+ GVANFDPVKR+ Sbjct: 1 MASTSAVSMAMPITSASQK--KVPSSEAFFKPLPLRQSKAVMASKSNGKFQVKASLKEKAITGLTAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIVAGGVVLTAIVGAIIGVANFDPVKRS 121
BLAST of Ca_01661 vs. TrEMBL
Match: B9HD21_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_832074 PE=4 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.791e-31 Identity = 76/123 (61.79%), Postives = 97/123 (78.86%), Query Frame = 1 Query: 10 ASVATALPLRSATQNSLKRP-SSESFFRPLPVKQPKRV-----THSKSKLEIHASLKQKAVTGLTAASLTASMVIPEVAHAAGSDLSPSLQNFLLSIFAGGAVLTAIFGAVFGVANFDPVKRA 360 ASV+ A+PL SA+Q L++P +S+SF +PLP++ V + S+++LE+ ASLK+KAVTGLTAA+LTASMVIPEVA AAG +SPSL+NFLLSI AGG V AI GAV GV+NFDPVKR+ Sbjct: 2 ASVSMAMPLASASQKRLEQPPNSQSFLKPLPIRPSMEVGLSTKSKSRARLEVQASLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSIAAGGVVAVAIIGAVLGVSNFDPVKRS 124 The following BLAST results are available for this feature:
BLAST of Ca_01661 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_01661 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
Expression
Available Analyses Select an Expression Analysis Select a property to group and sort biological samples Select a property to color biological samples Hover the mouse over a column in the graph to view more information about that biological sample. You can click and drag to rearrange groups along the x-axis. You can also click and drag to move the legend. InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_01661_v1.0_kabuli ID=Ca_01661_v1.0_kabuli; Name=Ca_01661; organism=Cicer arietinum; type=mRNA; length=363bpback to top protein sequence of Ca_01661_v1.0_kabuli >Ca_01661_v1.0_kabuli ID=Ca_01661_v1.0_kabuli; Name=Ca_01661_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=120bpback to top mRNA from alignment at Ca5:35688643..35689005- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_01661_v1.0_kabuli ID=Ca_01661_v1.0_kabuli; Name=Ca_01661; organism=Cicer arietinum; type=mRNA; length=363bp; location=Sequence derived from: Ca5:35688643..35689005- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:35688643..35689005- >Ca_01661_v1.0_kabuli ID=Ca_01661_v1.0_kabuli; Name=Ca_01661; organism=Cicer arietinum; type=CDS; length=363bp; location=Sequence derived from: Ca5:35688643..35689005- (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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