Ca_01669, Ca_01669_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_01669 vs. TrEMBL
Match: G7J8G5_MEDTR (MTD1 OS=Medicago truncatula GN=MTR_3g105210 PE=4 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 4.488e-47 Identity = 100/145 (68.97%), Postives = 115/145 (79.31%), Query Frame = 1 Query: 49 KDEIEQCPSSTTSSIGKDSDVSWDTKLEDIENESEAQSAYKYDEPLDMMDSLQHVLPIRKGISMFYDGKSKSFTSLADAASSPSVKDIAKQEDAYTRRRRNFMTFHYVWEKNRNFPLGSNNGGICKRAISLNQS----AFAINYD 471 +DE +QC SSTTSSIGKDSD S + D ++++EA+S Y YDEPL+MMDSLQ LPIR+GIS FYDGKSKSF SLADA SSPS KDIAK E+AYTRRRRN M ++VWEKN+NF L SNNGGI KR IS NQS AFA+NYD Sbjct: 24 EDEDDQCSSSTTSSIGKDSDAS---ECRDNDDDNEAESTYNYDEPLNMMDSLQQFLPIRRGISKFYDGKSKSFMSLADAVSSPSAKDIAKPENAYTRRRRNLMALNHVWEKNKNFLLRSNNGGISKRTISSNQSAVALAFAMNYD 165
BLAST of Ca_01669 vs. TrEMBL
Match: K7KTA6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.596e-44 Identity = 105/171 (61.40%), Postives = 122/171 (71.35%), Query Frame = 1 Query: 49 KDEIEQCPSSTTSSIGKDSDVSWDTKLEDIENESEAQSAYKYDEPLDMMDSLQHVLPIRKGISMFYDGKSKSFTSLADAASSPSVKDIAKQEDAYTRRRRNFMTFHYVWEKNRNFPLGSNNGGICKR-AISLNQS----AFAINYD-XXXXXXXXXXXXANPRSPPPLRPI 543 +D+ E C +S TSSIG DSDV +T+ EN++EA S YK +PLD MDSLQ VLPIR+GIS FYDGKSKSFTSLADA S+PSVKDIAK E+AYTRRRRN M WEK+RN+PL SNNGGI KR IS ++S AFAINYD +NPRSPPPL P+ Sbjct: 17 EDDNEHCSTSATSSIGNDSDVLSETECG--ENDNEAHSTYKCHQPLDTMDSLQQVLPIRRGISKFYDGKSKSFTSLADAGSTPSVKDIAKPENAYTRRRRNLM-----WEKSRNYPLRSNNGGISKRTTISSSRSTVTLAFAINYDSNSSCASEDSFSSSNPRSPPPLPPL 180
BLAST of Ca_01669 vs. TrEMBL
Match: I1MX85_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.468e-37 Identity = 83/139 (59.71%), Postives = 111/139 (79.86%), Query Frame = 1 Query: 49 KDEIEQCPSSTTSSIGKDSDVSWDTKLEDIENESEAQSAYKYDEPLDMMDSLQHVLPIRKGISMFYDGKSKSFTSLADAASSPSVKDIAKQEDAYTRRRRNFMTFHYVWEK-NRNFPLGSNNGGICKRAISLNQSAFAI 462 ++E E+C +ST+SSIG++SDVS + +E+ ENE E+ Y PL M++L+ VLPIR+GIS FY+GKSKSFT+LADA SSPSVKDIAK E+AYTRRRRN M ++V +K NRN+PL S+ GGICKR+ISL++S+ A+ Sbjct: 13 EEEEEECSTSTSSSIGRNSDVSSERSMEEGENEVESA----YHGPLHAMETLEEVLPIRRGISNFYNGKSKSFTTLADAVSSPSVKDIAKPENAYTRRRRNLMALNHVLDKNNRNYPLRSSGGGICKRSISLSRSSLAL 147
BLAST of Ca_01669 vs. TrEMBL
Match: C6T0J5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.468e-37 Identity = 83/139 (59.71%), Postives = 111/139 (79.86%), Query Frame = 1 Query: 49 KDEIEQCPSSTTSSIGKDSDVSWDTKLEDIENESEAQSAYKYDEPLDMMDSLQHVLPIRKGISMFYDGKSKSFTSLADAASSPSVKDIAKQEDAYTRRRRNFMTFHYVWEK-NRNFPLGSNNGGICKRAISLNQSAFAI 462 ++E E+C +ST+SSIG++SDVS + +E+ ENE E+ Y PL M++L+ VLPIR+GIS FY+GKSKSFT+LADA SSPSVKDIAK E+AYTRRRRN M ++V +K NRN+PL S+ GGICKR+ISL++S+ A+ Sbjct: 13 EEEEEECSTSTSSSIGRNSDVSSERSMEEGENEVESA----YHGPLHAMETLEEVLPIRRGISNFYNGKSKSFTTLADAVSSPSVKDIAKPENAYTRRRRNLMALNHVLDKNNRNYPLRSSGGGICKRSISLSRSSLAL 147
BLAST of Ca_01669 vs. TrEMBL
Match: C6SW05_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 4.210e-37 Identity = 81/135 (60.00%), Postives = 108/135 (80.00%), Query Frame = 1 Query: 61 EQCPSSTTSSIGKDSDVSWDTKLEDIENESEAQSAYKYDEPLDMMDSLQHVLPIRKGISMFYDGKSKSFTSLADAASSPSVKDIAKQEDAYTRRRRNFMTFHYVWEK-NRNFPLGSNNGGICKRAISLNQSAFAI 462 E C S+++SSIG++SDVS + +E+ ENE E+ Y PL M++L+ VLPIR+GIS FY+GKSKSFT+LADA SSPSVKDIAK E+AYTRRRRN M +++W+K NRN+PL S+ GGICKR+ISL++S+ A+ Sbjct: 20 ECCTSTSSSSIGRNSDVSSERSMEEGENEVESA----YHGPLHAMETLEEVLPIRRGISNFYNGKSKSFTTLADAVSSPSVKDIAKPENAYTRRRRNLMALNHIWDKNNRNYPLRSSGGGICKRSISLSRSSLAL 150
BLAST of Ca_01669 vs. TrEMBL
Match: K7KIA9_SOYBN (Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 2.554e-34 Identity = 83/141 (58.87%), Postives = 102/141 (72.34%), Query Frame = 1 Query: 139 ENESEAQSAYKYDEPLDMMDSLQHVLPIRKGISMFYDGKSKSFTSLADAASSPSVKDIAKQEDAYTRRRRNFMTFHYVWEKNRNFPLGSNNGGICKR-AISLNQS----AFAINYD-XXXXXXXXXXXXANPRSPPPLRPI 543 EN++EA SAYK EPLD MDSLQH+LPIR GIS FYDGKSKSFTSL DA S+P +KDIAK E+AYT R RN M F++ WEK++++ L SN+GGI K+ IS ++S AFAINY+ +NPRSPPPL P+ Sbjct: 3 ENDNEAHSAYKCLEPLDTMDSLQHLLPIR-GISKFYDGKSKSFTSLVDAGSTPYIKDIAKSENAYTSRGRNLMAFNHTWEKSQSYLLRSNSGGISKKTTISSSRSTVALAFAINYESSSCCASEDSSLSSNPRSPPPLPPL 142
BLAST of Ca_01669 vs. TrEMBL
Match: A5B5R8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g02000 PE=4 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.162e-33 Identity = 75/138 (54.35%), Postives = 105/138 (76.09%), Query Frame = 1 Query: 49 KDEIEQCPSSTTSSIGKDSDVSWDTKLEDIENESEAQSAYKYDEPLDMMDSLQHVLPIRKGISMFYDGKSKSFTSLADAASSPSVKDIAKQEDAYTRRRRNFMTFHYVWEKNRNFPLGSNNGGICKRAISLNQSAFAI 462 ++E++ C SS SSIGK+SDVS + ++ E+E QS+YK PLD M++L+ VLP+R+GIS FY+GKSKSFTSLADA++S S KD+AK E+AY RRRRN + +++V +KNRNFPL SN GGI K+ + ++S A+ Sbjct: 53 EEELDSCSSS--SSIGKNSDVSGMSSDQEDSGETEVQSSYK--RPLDSMNALEEVLPLRRGISRFYNGKSKSFTSLADASTSASCKDLAKPENAYNRRRRNLLAYNHVLDKNRNFPLRSNGGGISKKLAATSRSTLAL 186
BLAST of Ca_01669 vs. TrEMBL
Match: Q9LLM3_MEDTR (MTD1 OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 8.216e-33 Identity = 75/139 (53.96%), Postives = 105/139 (75.54%), Query Frame = 1 Query: 52 DEIEQCPSSTTSSIGKDSDVSWDTKL--EDIENESEAQSAYKYDEPLDMMDSLQHVLPIRKGISMFYDGKSKSFTSLADAASSPSVKDIAKQEDAYTRRRRNFMTFHYVWEKNRNFPLGSNNGGICKRAISLNQSAFAI 462 D+ + C ++++SSIG++SD D ++ E +E+EA+S Y LD M++L+ VLPIR+ IS FY GKSKSFTSLAD ++PSVKDI K E+AYTRRRRN + F++ W+KN+NFPL SN+GGI KR +SL++SA A+ Sbjct: 28 DQGKVCSTTSSSSIGRNSDDDDDDEVSSERSMDENEAESKYN-GGALDCMEALEEVLPIRRSISNFYSGKSKSFTSLADVVTTPSVKDIVKPENAYTRRRRNLLAFNHGWDKNKNFPLRSNSGGISKRTMSLSRSALAL 165
BLAST of Ca_01669 vs. TrEMBL
Match: G7I932_MEDTR (MTD1 OS=Medicago truncatula GN=MTR_1g015650 PE=4 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 8.216e-33 Identity = 75/139 (53.96%), Postives = 105/139 (75.54%), Query Frame = 1 Query: 52 DEIEQCPSSTTSSIGKDSDVSWDTKL--EDIENESEAQSAYKYDEPLDMMDSLQHVLPIRKGISMFYDGKSKSFTSLADAASSPSVKDIAKQEDAYTRRRRNFMTFHYVWEKNRNFPLGSNNGGICKRAISLNQSAFAI 462 D+ + C ++++SSIG++SD D ++ E +E+EA+S Y LD M++L+ VLPIR+ IS FY GKSKSFTSLAD ++PSVKDI K E+AYTRRRRN + F++ W+KN+NFPL SN+GGI KR +SL++SA A+ Sbjct: 75 DQGKVCSTTSSSSIGRNSDDDDDDEVSSERSMDENEAESKYN-GGALDCMEALEEVLPIRRSISNFYSGKSKSFTSLADVVTTPSVKDIVKPENAYTRRRRNLLAFNHGWDKNKNFPLRSNSGGISKRTMSLSRSALAL 212
BLAST of Ca_01669 vs. TrEMBL
Match: B9RQX8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0707610 PE=4 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 8.216e-33 Identity = 76/133 (57.14%), Postives = 102/133 (76.69%), Query Frame = 1 Query: 64 QCPSSTTSSIGKDSDVSWDTKLEDIENESEAQSAYKYDEPLDMMDSLQHVLPIRKGISMFYDGKSKSFTSLADAASSPSVKDIAKQEDAYTRRRRNFMTFHYVWEKNRNFPLGSNNGGICKRAISLNQSAFAI 462 + SSTTSSIGK+SD+S + E+ E+E+E QSA+K LD MD+L+ L +R+GIS FY+GKSKSFTSLA+A+SS +K+I K E+AYTRRRRN + F++VW+KNR+FP SN GGI KR IS ++S A+ Sbjct: 49 EAASSTTSSIGKNSDLS--SNGENCEDENEVQSAFK--GTLDAMDALEEALSMRRGISKFYNGKSKSFTSLAEASSSSCIKEITKPENAYTRRRRNLLAFNHVWDKNRSFPHRSNGGGISKRPISSSKSTLAL 177 The following BLAST results are available for this feature:
BLAST of Ca_01669 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_01669 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_01669_v1.0_kabuli ID=Ca_01669_v1.0_kabuli; Name=Ca_01669; organism=Cicer arietinum; type=mRNA; length=558bpback to top protein sequence of Ca_01669_v1.0_kabuli >Ca_01669_v1.0_kabuli ID=Ca_01669_v1.0_kabuli; Name=Ca_01669_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=185bpback to top mRNA from alignment at Ca5:35625330..35626354+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_01669_v1.0_kabuli ID=Ca_01669_v1.0_kabuli; Name=Ca_01669; organism=Cicer arietinum; type=mRNA; length=1025bp; location=Sequence derived from: Ca5:35625330..35626354+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:35625330..35626354+ >Ca_01669_v1.0_kabuli ID=Ca_01669_v1.0_kabuli; Name=Ca_01669; organism=Cicer arietinum; type=CDS; length=558bp; location=Sequence derived from: Ca5:35625330..35626354+ (Cicer arietinumback to top |