Ca_01732, Ca_01732_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_01732 vs. TrEMBL
Match: G7J9X4_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g106340 PE=4 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 5.652e-85 Identity = 177/248 (71.37%), Postives = 190/248 (76.61%), Query Frame = 1 Query: 1 MTLNDDWVKTAMTDDTVVVELLLRLKHRLSIKSQPAPTLPFSWGNKQPRSRSRITASVSRCDAAVSTRCSPTTPLSWSGGASPSVTADGYEDXXXXXXXXXXXXKATATSGYTSNSASTKRCGRXXXXXXXXXXXXXXXXXRIYLEREIATKNANFEVMRTTNESLKRMKLDFGSKSHNKPS-SKSVELRGKHAGGQPHQRIVPSEVLPRTTLDDTHSQAPESRPNVIESSGQSFFMIPDLNMMPSDD 741 M LND+W++ AM DDTVVVELLLRLK + KS+ L FSWG+KQ RSRSR TASVSRCD AVSTRCSPTTPLSWSGGASPSVTA+GYED KATATSGYTSNSASTKRC R RI+LEREIAT+NANFEVMRTTNESLKRMKL FGSKSH+KPS S SVELRG A GQPH+RIVPSEVL T DDTHSQA ESRPN IES+G+S FMIPDLNMMPSDD Sbjct: 1 MMLNDEWMRAAMKDDTVVVELLLRLKQPVETKSRG---LSFSWGHKQRRSRSRTTASVSRCDRAVSTRCSPTTPLSWSGGASPSVTAEGYED--SSRYNHAARSKATATSGYTSNSASTKRCKRKKSFAELKEEETTLLKERIHLEREIATRNANFEVMRTTNESLKRMKLGFGSKSHSKPSCSTSVELRGTLA-GQPHRRIVPSEVLTCATQDDTHSQASESRPNRIESTGESVFMIPDLNMMPSDD 242
BLAST of Ca_01732 vs. TrEMBL
Match: I1K8R4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 2.723e-71 Identity = 159/261 (60.92%), Postives = 176/261 (67.43%), Query Frame = 1 Query: 1 MTLNDDWVKTAMTDDTVVVELLLRLKHRLSI-KSQPAPTLPFSWGNKQPRSRSRIT-ASVSRCDAAVSTRCSPTTPLSWSGGASPSVTADGYEDXXXXXXXXXXXXKATATSGYTSNSASTKRCGRXXXXXXXXXXXXXXXXXRIYLEREIATKNANFEVMRTTNESLKRMKLDFGSKSHNKPSSKSVELRGKHAGGQPHQRIVPS-EVLPRTTLDDTHSQAPESRPNVIESSGQSFFMIPDLNMMPSDDGSCADAQYGMS 774 M +D+WV+ AM DDTVVVELLLRLK + KS LPFSWG KQPRSRSR+T A+VSRCDAAVSTRCSPTTPLSWS GA D YED KATATSGYT NSASTKRC R IYL++EIA+ NANFE R NESLKRMKLD GSK N PSS SVE + AG QPHQRIV S E L R +DTHS A ESRPN I+S+G+SFF+IPDLNM+PS+D SC DA GMS Sbjct: 1 MVNDDEWVRAAMEDDTVVVELLLRLKQGTVLHKSHHQQLLPFSWGVKQPRSRSRLTSAAVSRCDAAVSTRCSPTTPLSWSAGA------DSYEDSSRHHHHHAAVSKATATSGYTGNSASTKRCRRKKTFAELKEEESSLLKESIYLKKEIASVNANFEAQRAKNESLKRMKLDVGSKYQNNPSSTSVEPQRLPAG-QPHQRIVVSTEALIRPIQEDTHSLASESRPNRIKSTGESFFLIPDLNMVPSEDVSCTDALCGMS 254
BLAST of Ca_01732 vs. TrEMBL
Match: I1JU98_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 6.707e-70 Identity = 157/261 (60.15%), Postives = 170/261 (65.13%), Query Frame = 1 Query: 1 MTLNDDWVKTAMTDDTVVVELLLRLKHRLSIKSQPAPTLPFSWGNKQPRSRSRITASVSRCDAAVSTRCSPTTPLSWSGGASPSVTADGYEDXXXXXXXXXXXXKATATSGYTSNSASTKRCGRXXXXXXXXXXXXXXXXXRIYLEREIATKNANFEVMRTTNESLKRMKLDFGSKSH-NKPSSKSVELRGKHAGGQPHQRI-VPSEVLPRTTLDDTHSQAPESRPNVIES-SGQSFFMIPDLNMMPSDDGSCADAQYGMS 774 M D+WV+ AM DDTVVVELLLRLK +PFSWG KQPRSRSR++A+VSRCDAAVSTRCSPTTPLSWS G D YED KATATSGYT NSASTKRC R IYL++EIAT NANFE R NESLKRMKLD G K H N PSS SVE + A GQPHQRI V SE L R DDTHS A ESRPN IES +G+SFF+IPDLNMMPS+D SC D GMS Sbjct: 1 MVNEDEWVRAAMADDTVVVELLLRLKQGTVSHKSHHQLIPFSWGVKQPRSRSRLSAAVSRCDAAVSTRCSPTTPLSWSAG------TDSYEDSSRHHHHHAAISKATATSGYTGNSASTKRCRRKKTFAELKEEESSLLKESIYLKKEIATVNANFEAQRAKNESLKRMKLDVGLKYHQNNPSSTSVEPQCVLA-GQPHQRIVVSSEALIRPIQDDTHSHASESRPNKIESTTGKSFFLIPDLNMMPSEDVSCTDNLCGMS 254
BLAST of Ca_01732 vs. TrEMBL
Match: G7J9X5_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g106340 PE=4 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 7.997e-39 Identity = 89/124 (71.77%), Postives = 96/124 (77.42%), Query Frame = 1 Query: 1 MTLNDDWVKTAMTDDTVVVELLLRLKHRLSIKSQPAPTLPFSWGNKQPRSRSRITASVSRCDAAVSTRCSPTTPLSWSGGASPSVTADGYEDXXXXXXXXXXXXKATATSGYTSNSASTKRCGR 372 M LND+W++ AM DDTVVVELLLRLK + KS+ L FSWG+KQ RSRSR TASVSRCD AVSTRCSPTTPLSWSGGASPSVTA+GYED KATATSGYTSNSASTKRC R Sbjct: 1 MMLNDEWMRAAMKDDTVVVELLLRLKQPVETKSRG---LSFSWGHKQRRSRSRTTASVSRCDRAVSTRCSPTTPLSWSGGASPSVTAEGYED--SSRYNHAARSKATATSGYTSNSASTKRCKR 119
BLAST of Ca_01732 vs. TrEMBL
Match: B9RNZ0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0922440 PE=4 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.020e-33 Identity = 98/277 (35.38%), Postives = 141/277 (50.90%), Query Frame = 1 Query: 13 DDWVKTAMTDDTVVVELLLRLKHRL--SIKSQPAPTLPFSWGNKQPRSR-SRITASVSRCD--------------AAVSTRCSPTTPLSWSGG---ASPSVTADGYEDXXXXXXXXXXXXKATATSGYTSNSASTKRCGRXXXXXXXXXXXXXXXXXRIYLEREIATKNANFEVMRTTNESLKRMKLDFGSKSHNKPSSKSVELRGKHAGGQPHQRIVPS-----EVLPRTTLDDTHSQAPESRPNVIESSGQSFFMIPDLNMMPSDDGSCADAQYG 768 D+WV+ AMTDD VVVELL+RLK ++ S+P P +P WG + PRSR + +AS RCD STRCSPTTPLSWSGG ASPS TADG+E+ ++ T+ S + +TKR R +++L++E+A+ NA F R+ NE+LKR+KLD + SS E+ + + HQR S +LP D ++Q+ + + S F++PDLNMMP+++ + G Sbjct: 4 DEWVRAAMTDDRVVVELLVRLKQAPDEAVSSKPQPVIPLRWGLRLPRSRPATASASSLRCDNNNNDVVLVSTRKDGDSSTRCSPTTPLSWSGGGGSASPSATADGFEE---TSRRSSPAVRSKVTAETASTTTNTKRSKRKKTFAELRIEEGLLMKEKMHLKKELASLNATFNEQRSRNENLKRIKLDLNLQYAENSSSARDEME-EAICSRSHQREPSSSNQIISILPMYAKGDDNTQSGSCQTHEAVSDHDKSFLLPDLNMMPTEEDPATETLPG 276
BLAST of Ca_01732 vs. TrEMBL
Match: B9HAT5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_654203 PE=4 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.152e-27 Identity = 91/267 (34.08%), Postives = 123/267 (46.07%), Query Frame = 1 Query: 13 DDWVKTAMTDDTVVVELLLRLKHRLSIKSQPA--PTLPFSWGNKQPRSR----SRITASVSRCDAAV----------STRCSPTTPLSWS----GGASPSVTADGYEDXXXXXXXXXXXXKATATSGY---TSNSASTKRCGRXXXXXXXXXXXXXXXXXRIYLEREIATKNANFEVMRTTNESLKRMKLDFGSKSHNKPSSKSVELRGKHAGGQPHQRIVPSEVLPRTTLDDTHSQAPESRPNVIESSGQSFFMIPDLNMMPSDDG 744 ++WV AM D+TVV +LLLRLK + S A +P WG + PRSR + +S RCD + STRCSPTTPLSWS GGASPS T DG+E+ + G + S KR + +YL++EI+T A F+ R NE+LKR+K+D + EL + G P LP D+H Q+ S + S+ F++PDLNMMPSD+G Sbjct: 3 EEWVTAAMADETVVAKLLLRLKQSQATASASAVPAVIPLRWGMRLPRSRPGTMTATNSSSLRCDVVLKSKEGGGGDSSTRCSPTTPLSWSGGGDGGASPSGTGDGFEETSRRHLSSSPPPPGVRSKGAGIGETTSNIVKRSRKKKTFSELKEEETQLVKEGVYLKKEISTVRATFKEERARNENLKRIKIDLNLHYGD-------ELEASTSNGIP-------STLPTRAKGDSHLQSSSSETDKAISNHDRSFLLPDLNMMPSDEG 255
BLAST of Ca_01732 vs. TrEMBL
Match: D7SUZ8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g06060 PE=4 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.668e-26 Identity = 89/255 (34.90%), Postives = 123/255 (48.24%), Query Frame = 1 Query: 49 VVVELLLRLKHRLSIKSQPAPTLPFSWGNKQPRSRSRITASVSRCDAAV------STRCSPTTPLSWSGGASPSVTADG--YEDXXXXXXXXXXXXKATATSGYTSNSASTKRCGRXXXXXXXXXXXXXXXXXRIYLEREIATKNANFEVMRTTNESLKRMKLDFG-SKSHNKPSSKSVELRGKHAGGQPHQRIVPSE-----VLPRTTLDDTHSQAPESRPNVIESSGQSFFMIPDLNMMPSDDGSCADAQYGM 771 VV ELLLRLK + P PF WG + PRSRS SRCD TR SPTTPLSWSGGASPS AD +ED ++ T+ + + +TKR R R YL++E+AT F+ R TNESLKRMK+DF + ++ + E + +PH+ PSE ++P L + Q+ + + ++ + FM+PDLNMM +D ++ YGM Sbjct: 2 VVAELLLRLKQS---HASPPLLTPFKWGLRLPRSRSS-----SRCDVVSVRKDREPTRRSPTTPLSWSGGASPSAAADADAFEDCSRSSSIRFAAARSKVTALSETTNTNTKRSRRKKTFAELKEEEILLLKERTYLKKELATLRVTFKEQRATNESLKRMKIDFHLNLVKGTGAAATDEAKEAIPRKEPHKMEGPSEDHAPSIVPVQALSNDLLQSESCQVKMNDAPRDNVFMLPDLNMMAMEDDIGSETLYGM 248
BLAST of Ca_01732 vs. TrEMBL
Match: I1M5X8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.262e-24 Identity = 93/253 (36.76%), Postives = 127/253 (50.20%), Query Frame = 1 Query: 10 NDDWVKTAMTDDTVVVELLLRLKHRLSIKSQPAPTLPFSWGNKQPRSRSRITASVSRCDAAVSTRCSPTTPLSWSGGASPSV-TADGYEDXXXXXXXXXXXXKATATS----GYTSNSASTKRCGRXXXXXXXXXXXXXXXXXRIYLEREIATKNANFEVMRTTNESLKRMKLDFGSKSHNKPSSKSVELRGKHAGGQPHQRIVPSEVLP--RTTLDDTHSQAPESRPNVIESSG--QSFFMIPDLNMMPSDD 741 +D WVK AM DD++VV+LLLRL HR P P L W +Q RSRS + A STR SPTTPLSWSG S S DGYE+ K + TS S +A+T++ R R LE+E+A+ + R TNES+KR+KLDF S+ ++ ++ + E+ GK G P Q V SE P T DD+ A + P ++ G +S F++PDLN+ +D Sbjct: 3 DDHWVKVAMADDSLVVDLLLRL-HR---SPPPPPCLNLHWTVRQRRSRSAH-------NKAESTRASPTTPLSWSGATSASGGNLDGYEES-----------KPSQTSRSKVANPSETATTRKTRRKKTLTELKEEEDLLLKERRNLEKELASLRLTIQKHRATNESIKRLKLDFESRQNSSAAATASEVSGKAVNG-PFQ-FVKSECHPSNSVTHDDSPVCAANASPKAQDNIGNRESTFVLPDLNLPADED 231
BLAST of Ca_01732 vs. TrEMBL
Match: M4D4B2_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra011316 PE=4 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.239e-23 Identity = 87/250 (34.80%), Postives = 124/250 (49.60%), Query Frame = 1 Query: 7 LNDDWVKTAMTDDTVVVELLLRLKHRLSIKSQ-PAPTLP-FSWGNKQPRSRSRITASVSRCDAAVSTRCSPTTPLSWSGGASPSVTADGYED---XXXXXXXXXXXXKATATSGYTSNSASTKRCGRXXXXXXXXXXXXXXXXXRIYLEREIATKNANFEVMRTTNESLKRMKLDFGSKSHNKPSSKSVELRGKHAGGQPHQRIVPSEVLPRTTLDDTHSQAPESRPNVIESSGQSFFMIPDLNMMPSDD 741 + D+WV TAMTDD +VVELL+RLKH ++ S+ P+ LP WG +Q RSRS VS S R SP TPLSWSGG S S +ADG+ED KA T+ TS S S + + R LE+EIA+ F+V N+ LKR+KLD S G ++ + +++ P+ + +A +++ +E+ SFF +PDLNM+P++D Sbjct: 13 VKDEWVTTAMTDDEMVVELLIRLKHAGTVVSEDPSTNLPPLRWGVRQRRSRSSRFGVVSLKKDVDSARGSPKTPLSWSGGGSASPSADGFEDTSLQASCSTSTGSGSKAFPTNEITS-SFSKRLKIKKKSSSELKYQENLKLKERTDLEKEIASLRETFDVQNVRNQRLKRIKLDLNS------------------GRVKNETL--ADLTPKPQGESKSRRAEDNKTASLENK-DSFFFLPDLNMVPTED 240
BLAST of Ca_01732 vs. TrEMBL
Match: M5Y798_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022196mg PE=4 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.619e-23 Identity = 79/210 (37.62%), Postives = 103/210 (49.05%), Query Frame = 1 Query: 1 MTLNDDWVKTAMTDDTVVVELLLRLKH-RLSIKSQPAP---TLPFSWGNKQPRSRSRITASVSRCDAAVS-------------TRCSPTTPLSWSGG-ASPSVTADGYED------------------XXXXXXXXXXXXKATATSGYTSNSASTKRCGRXXXXXXXXXXXXXXXXXRIYLEREIATKNANFEVMRTTNESLKRMKLDFG 522 M + D+W++ AMTDD +VVELL+RLK + + S +P ++P WG + PRS+S +S SR D VS TRCSPTTPLSWSGG SPS TADG+E+ TAT TS + +TKR R R YLE+EIAT A F+ R NE+ KR+K++ G Sbjct: 1 MVVKDEWMRAAMTDDMLVVELLVRLKQSQTAASSSSSPLLESIPLRWGIRLPRSKS--ASSASRFDGVVSRQRNISKHGTDSATRCSPTTPLSWSGGTGSPSATADGFEESSCPRSKEAKREAMFVWTMEERRPWEEKQRHGTATYESTSTTTATKRARRKKTFAELKEEESSLLKERTYLEKEIATLQATFKQQRAKNENFKRIKVNSG 208 The following BLAST results are available for this feature:
BLAST of Ca_01732 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
Pagesback to top
BLAST of Ca_01732 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_01732_v1.0_kabuli ID=Ca_01732_v1.0_kabuli; Name=Ca_01732; organism=Cicer arietinum; type=mRNA; length=777bpback to top protein sequence of Ca_01732_v1.0_kabuli >Ca_01732_v1.0_kabuli ID=Ca_01732_v1.0_kabuli; Name=Ca_01732_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=258bpback to top mRNA from alignment at Ca5:35039375..35042407- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_01732_v1.0_kabuli ID=Ca_01732_v1.0_kabuli; Name=Ca_01732; organism=Cicer arietinum; type=mRNA; length=3033bp; location=Sequence derived from: Ca5:35039375..35042407- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:35039375..35042407- >Ca_01732_v1.0_kabuli ID=Ca_01732_v1.0_kabuli; Name=Ca_01732; organism=Cicer arietinum; type=CDS; length=777bp; location=Sequence derived from: Ca5:35039375..35042407- (Cicer arietinumback to top |