Ca_01808, Ca_01808_v1.0_kabuli (mRNA) Cicer arietinum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_01808 vs. TrEMBL
Match: G7JBR3_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g108100 PE=4 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 5.180e-66 Identity = 159/324 (49.07%), Postives = 165/324 (50.93%), Query Frame = 1 Query: 1 MVGGGSRRDDGSLVISNTNVFAALDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVFWAPAPLNATSWAXXXXXXX-YYATTAPPQAVWSVSDSQTSKDKQEIFEDTXXXXXXXXXXXXXXXXXXXXXXXXHTVKPEPEDKKHAEVPVAPKEAERQXXXXXXXXXXXXXXXXXXADFGVTQKESNDGQGQHESQGTPQDKKGVEADGDGEKKEIPXXXXXXXXXXXXXXXXXXXXXXNGQTNSSETNNEPDLASGTENADEDSSVVDVKERLXXXXXXXXXXXXXEMDXXXXXXXXXXXXXXXXXXXXKKKEKNHYNQQPVR 969
MVGGGSRRD+GSLVISNTNVFAALDTL Q FWAPAPLNATSWA YY TTAPPQ SD Q S+DK E FEDT H VK EPE KKHAEVPV PKEAERQ ADFGVTQKESNDGQ Q ESQG PQDKKGVE D DGEKKEI NG NSSETNN PD+A+GTEN++ED SVVDVKERL EMD KKKEKNHYNQQPVR
Sbjct: 1 MVGGGSRRDEGSLVISNTNVFAALDTLKKKKKSDKDKKNKGSSKSTKSESES----QAFWAPAPLNATSWADVDDDDDDYYLTTAPPQ----FSDPQPSEDKPEHFEDTESEEDILDDGDEEEEEQDHEPEPEHAVKTEPEVKKHAEVPVMPKEAERQLSKKERKKKELEELEALLADFGVTQKESNDGQSQDESQGVPQDKKGVEGDVDGEKKEIAPESKNAKKKKKKDKASKEVKEANGHPNSSETNNGPDMATGTENSEEDLSVVDVKERLKKVASMKKKKSSKEMDAAARAAAQEAAARNARLAASKKKEKNHYNQQPVR 316
BLAST of Ca_01808 vs. TrEMBL
Match: G7JBR2_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g108090 PE=4 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 9.792e-57 Identity = 149/325 (45.85%), Postives = 159/325 (48.92%), Query Frame = 1 Query: 1 MVGGGSRRDDGSLVISNTNVFAALDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVFWAPAPLNATSWAXXXXXXX-YYATTAPPQAVWSVSDSQTSKDKQEIFEDTXXXXXXXXXXXXXXXXXXXXXXXX-HTVKPEPEDKKHAEVPVAPKEAERQXXXXXXXXXXXXXXXXXXADFGVTQKESNDGQGQHESQGTPQDKKGVEADGDGEKKEIPXXXXXXXXXXXXXXXXXXXXXXNGQTNSSETNNEPDLASGTENADEDSSVVDVKERLXXXXXXXXXXXXXEMDXXXXXXXXXXXXXXXXXXXXKKKEKNHYNQQPVR 969
MVGGGSRRD+GSLVISNTNVFAALDTL Q FWAPAPLNATSWA YY TTAPPQ SD Q S+DK E FE++ +TVKPEPE KK+AEVP APKEAERQ ADFGVTQ E+NDGQGQ ESQG PQDKKGV+ D DGEKKEI NGQ NSS+ ENA+EDSSVVDVKERL EMD KKKEKNHYNQQPVR
Sbjct: 1 MVGGGSRRDEGSLVISNTNVFAALDTLKKKKKSDKDKKNKGSSKSTKSESES----QAFWAPAPLNATSWADVDDDDDDYYLTTAPPQ----FSDPQPSEDKPEHFEESESEEDILDEGDEEVEEEQDHESEPEYTVKPEPEVKKNAEVPAAPKEAERQLSKKERKKKELEELEALLADFGVTQNENNDGQGQDESQGAPQDKKGVDGDVDGEKKEITAESKNAKKKKRKDKASKEVKESNGQPNSSD----------VENAEEDSSVVDVKERLKKVASMRKKKSSKEMDAAARAAAQEAAARNARLAAAKKKEKNHYNQQPVR 307
BLAST of Ca_01808 vs. TrEMBL
Match: I1JUJ5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 8.578e-53 Identity = 143/328 (43.60%), Postives = 161/328 (49.09%), Query Frame = 1 Query: 1 MVGGGSRRDDGSLVISNTNVFAALDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVFWAPAPLNATSWAXXXXXXX--YYATTAPPQAVWSVSDSQTSK-DKQEIFEDTXXXXXXXXXXXXXXXXXXXXXXXXHTVKPEPEDKKHAEVPVAP-KEAERQXXXXXXXXXXXXXXXXXXADFGVTQKESNDGQGQHESQGTPQDKKGVEADGDGEKKE-IPXXXXXXXXXXXXXXXXXXXXXXNGQTNSSETNNEPDLASGTENADEDSSVVDVKERLXXXXXXXXXXXXXEMDXXXXXXXXXXXXXXXXXXXXKKKEKNHYNQQPVR 969
MVGGG+RR++GSLV++NTNVFAALDTL QVFWAPAPLNA SWA YYATTAPPQ+VW VS+ SK DK FED+ ++KPEPE KK AEVP+ P KE ERQ ADFGV K+S DGQ ESQG QDK GVE DGDGEKKE +P Q NSS+TNN PDLA+GTEN +ED+S VDVKERL EMD KKKEKNHYNQQP+R
Sbjct: 1 MVGGGNRREEGSLVLNNTNVFAALDTLKKKKKSDKEKSKGSSTKSQAQSAKAEA--QVFWAPAPLNAKSWADVDDEDDDDYYATTAPPQSVWGVSEPHHSKEDKHGNFEDSESEEDILDEGDDEVEEEHDHEPE-ESLKPEPEVKKDAEVPLPPPKETERQLSKKERKKKELAELEALLADFGVAPKQSKDGQD--ESQGA-QDKTGVETDGDGEKKENVPAESKTSKKKKKKDKASKEVKESQDQPNSSDTNNGPDLATGTENVEEDTSTVDVKERLKKVASTKKKKSSKEMDAAARAAAQEAAARSARLAAAKKKEKNHYNQQPIR 322
BLAST of Ca_01808 vs. TrEMBL
Match: I1K910_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.051e-50 Identity = 143/328 (43.60%), Postives = 158/328 (48.17%), Query Frame = 1 Query: 1 MVGGGSRRDDGSLVISNTNVFAALDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVFWAPAPLNATSWAXXXXXXX--YYATTAPPQAVWSVSDSQTSK-DKQEIFEDTXXXXXXXXXXXXXXXXXXXXXXXXHTVKPEPEDKKHAEVPVAP-KEAERQXXXXXXXXXXXXXXXXXXADFGVTQKESNDGQGQHESQGTPQDKKGVEADGDGEKKE-IPXXXXXXXXXXXXXXXXXXXXXXNGQTNSSETNNEPDLASGTENADEDSSVVDVKERLXXXXXXXXXXXXXEMDXXXXXXXXXXXXXXXXXXXXKKKEKNHYNQQPVR 969
MVGGGSRRD+GSLV++NTNVFAALDTL VFWAPAPLNA SWA YYATTAPPQ+VW VS+ SK DK FE++ ++KPE E KK EVP+ P KE ERQ ADFGV K+SNDGQ ESQG QDKKGVE DGDGEKKE +P Q NSS+TNN PDLA+G EN ED+S VDVKERL EMD KKKEKNHYNQQPVR
Sbjct: 1 MVGGGSRRDEGSLVLNNTNVFAALDTLKKKKKSDKEKKSKGSSTKSQAQSAKAEAP-VFWAPAPLNAKSWADVDDEDDDDYYATTAPPQSVWGVSEPHHSKEDKHGNFEESESEEDILDEGDDEVEEEHDHEPE-ESLKPEHEVKKDTEVPLPPPKETERQLSKKERKKKELAELEALLADFGVAPKQSNDGQD--ESQGA-QDKKGVETDGDGEKKENVPAESKTSKKKKKKDKASKEVKESQDQPNSSDTNNGPDLATGAENV-EDTSTVDVKERLKKVASTKKKKSSKEMDAAARAAAQEAAARSARLAAAKKKEKNHYNQQPVR 322
BLAST of Ca_01808 vs. TrEMBL
Match: I3SX03_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.034e-47 Identity = 136/324 (41.98%), Postives = 146/324 (45.06%), Query Frame = 1 Query: 1 MVGGGSRRDDGSLVISNTNVFAALDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVFWAPAPLNATSWAXXXXXXXYYATTAPPQAVWSVSDSQTSKDKQEIFEDTXXXXXXXXXXXXXXXXXXXXXXXX-HTVKPEPEDKKHAEVPVAPKEAERQXXXXXXXXXXXXXXXXXXADFGVTQKESNDGQGQHESQGTPQDKKGVEADGDGEKKEIPXXXXXXXXXXXXXXXXXXXXXXNGQTNSSETNNEPDLASGTENADEDSSVVDVKERLXXXXXXXXXXXXXEMDXXXXXXXXXXXXXXXXXXXXKKKEKNHYNQQPVR 969
MVGGGSRRD+GSLVISNTNVFAALDTL Q FWAPAP PQ SD Q S+DK E FE++ +TVKPEPE KK+AEVP APKEAERQ ADFGVTQ E+NDGQGQ ESQG PQDKKGV+ D DGEKKEI NGQ NSS+ ENA+EDSSVVDVKERL EMD KKKEKNHYNQQPVR
Sbjct: 1 MVGGGSRRDEGSLVISNTNVFAALDTLKKKKKSDKDKKNKGSSKSTKSESES----QAFWAPAP---------------------PQ----FSDPQPSEDKPEHFEESESEEDILDEGDEEVEEEQDHESEPEYTVKPEPEVKKNAEVPAAPKEAERQLSKKERKKKELEELEALLADFGVTQNENNDGQGQDESQGAPQDKKGVDGDVDGEKKEITAESKNAKKKKRKDKASKEVKESNGQPNSSD----------VENAEEDSSVVDVKERLKKVASMRKKKSSKEMDAAARAAAQEAAARNARLAAAKKKEKNHYNQQPVR 285
BLAST of Ca_01808 vs. TrEMBL
Match: B7FH44_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.491e-46 Identity = 135/324 (41.67%), Postives = 145/324 (44.75%), Query Frame = 1 Query: 1 MVGGGSRRDDGSLVISNTNVFAALDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVFWAPAPLNATSWAXXXXXXXYYATTAPPQAVWSVSDSQTSKDKQEIFEDTXXXXXXXXXXXXXXXXXXXXXXXX-HTVKPEPEDKKHAEVPVAPKEAERQXXXXXXXXXXXXXXXXXXADFGVTQKESNDGQGQHESQGTPQDKKGVEADGDGEKKEIPXXXXXXXXXXXXXXXXXXXXXXNGQTNSSETNNEPDLASGTENADEDSSVVDVKERLXXXXXXXXXXXXXEMDXXXXXXXXXXXXXXXXXXXXKKKEKNHYNQQPVR 969
MVGGGSRRD+GSLVISNTNVFAALDTL Q FWAPAP PQ SD Q S+DK E FE++ +TVKPEPE KK+AEVP APKEAERQ ADFGVTQ E+NDGQGQ ESQG PQDKKGV+ D DGEKKEI NGQ NS + ENA+EDSSVVDVKERL EMD KKKEKNHYNQQPVR
Sbjct: 1 MVGGGSRRDEGSLVISNTNVFAALDTLKKKKKSDKDKKNKGSSKSTKSESES----QAFWAPAP---------------------PQ----FSDPQPSEDKPEHFEESESEEDILDEGDEEVEEEQDHESEPEYTVKPEPEVKKNAEVPAAPKEAERQLSKKERKKKELEELEALLADFGVTQNENNDGQGQDESQGAPQDKKGVDGDVDGEKKEITAESKNAKKKKRKDKASKEVKESNGQPNSFD----------VENAEEDSSVVDVKERLKKVASMRKKKSSKEMDAAARAAAQEAAARNARLAAAKKKEKNHYNQQPVR 285
BLAST of Ca_01808 vs. TrEMBL
Match: M5XES2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008750mg PE=4 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 8.898e-42 Identity = 126/326 (38.65%), Postives = 144/326 (44.17%), Query Frame = 1 Query: 1 MVGGGSRRDDGSLVISNTNVFAALDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVFWAPAPLNATSWA--XXXXXXXYYATTAPPQAVWSVSDSQTSKDKQEIFEDTXXXXXXXXXXXXXXXXXXXXXXXXHTVKPEPEDKKHAEVPVAPKEAERQXXXXXXXXXXXXXXXXXXADFGVTQKESNDGQGQHESQGTPQDKKGVEADGDGEKKE-IPXXXXXXXXXXXXXXXXXXXXXXNGQTNSSETNNEPDLASGTENADEDSSVVDVKERLXXXXXXXXXXXXXEMDXXXXXXXXXXXXXXXXXXXXKKKEKNHYNQQPVR 969
MVGGGSRRD+GSLVI+NTNVFAAL+TL QVFWAPAPLNA SWA YYATTAPPQ+VW S+ +KD+ + ED+ V PEP KK A+VP PKEAERQ ADFGVTQKES+ Q ES+G Q+K +GDGEKKE P Q N+S N + E +ED+S VDVKERL EMD KKKEKNHYNQQPVR
Sbjct: 1 MVGGGSRRDEGSLVINNTNVFAALETLRKKKKSDKDRKSKGSSKSAQSAQPKAPEAQVFWAPAPLNAKSWADVDDEDDDDYYATTAPPQSVWGPSEPHQNKDRPNV-EDSESEEDILDEGDDDVEEEHDNEPEV-PVNPEPVLKKPADVPAPPKEAERQLSKKEKKKKELAELEALLADFGVTQKESD---SQDESRGAAQEKDSA-LNGDGEKKENQPAESKSAKKKKKKDKASKEVKESQDQPNNSGATNGLGEVTAAEQTEEDTSNVDVKERLKKVVTAKKKKSSKEMDAAAKAAAQEAAARRARLAAAKKKEKNHYNQQPVR 320
BLAST of Ca_01808 vs. TrEMBL
Match: B9H9F3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_561816 PE=4 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.192e-40 Identity = 121/329 (36.78%), Postives = 144/329 (43.77%), Query Frame = 1 Query: 1 MVGGGSRRDDGSLVISNTNVFAALDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ----VFWAPAPLNATSWAXXXXXXX--YYATTAPPQAVWSVSDSQTSKDKQEIFEDTXXXXXXXXXXXXXXXXXXXXXXXXHTVKPEPEDKKHAEVPVAPKEAERQXXXXXXXXXXXXXXXXXXADFGVTQKESNDGQGQHESQGTPQDKKGVEADGDGEKKEIPXXXXXXXXXXXXXXXXXXXXXXNGQTNSSETNNEPDLASGTENADEDSSVVDVKERLXXXXXXXXXXXXXEMDXXXXXXXXXXXXXXXXXXXXKKKEKNHYNQQPVR 969
M GGGSRRD+GSLVI++TNVFAAL+TL + VFWAPA L A SWA YYATTAPP +VW SD Q S++K E++ V PEP KK EVP+ PKE ERQ ADFGV QK+SN GQ ES Q+KK E +G+KKE Q +SE NN+P+ A+G E+A+ED+S VD+KERL EMD KKKEKNHYNQQPVR
Sbjct: 1 MAGGGSRRDEGSLVINSTNVFAALETLRKKKKSDKERVGSKSGKGGSKSGKEQQSKEPDPEVFWAPAKLTAKSWADVDDEDDDDYYATTAPPPSVWGSSDQQQSEEKSAHVEESESEEDILDEGDDDVEEEHDHEP--EAVHPEPVVKKTPEVPLPPKETERQLSKKERKKKELAELEALLADFGVAQKDSN---GQDESLDAAQEKKDGETHEEGDKKE--NVAGESKNAKKKKKKDKSAKEPQDQPTNSEANNKPEEAAGAEHAEEDASAVDMKERLKRMASAKKKKSSKEMDGGAKAAAQEAAARSARLAAAKKKEKNHYNQQPVR 322
BLAST of Ca_01808 vs. TrEMBL
Match: B9IKQ7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_578136 PE=4 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.398e-39 Identity = 121/329 (36.78%), Postives = 142/329 (43.16%), Query Frame = 1 Query: 1 MVGGGSRRDDGSLVISNTNVFAALDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ----VFWAPAPLNATSWAXXXXXXX--YYATTAPPQAVWSVSDSQTSKDKQEIFEDTXXXXXXXXXXXXXXXXXXXXXXXXHTVKPEPEDKKHAEVPVAPKEAERQXXXXXXXXXXXXXXXXXXADFGVTQKESNDGQGQHESQGTPQDKKGVEADGDGEKKEIPXXXXXXXXXXXXXXXXXXXXXXNGQTNSSETNNEPDLASGTENADEDSSVVDVKERLXXXXXXXXXXXXXEMDXXXXXXXXXXXXXXXXXXXXKKKEKNHYNQQPVR 969
M GGGSRRD+GSLVI+NTNVFAAL+TL + VFWAPA L A SWA YYATTAPP +VW S Q S++K E++ V+PEP KK EVPV PKE ERQ ADFGV QK+SN GQ ES+ +KK E + +G+KKE Q SSE +N P+ A+ E A+ED+S VDVKERL EMD KKKEKNHYNQQPVR
Sbjct: 1 MAGGGSRRDEGSLVINNTNVFAALETLRKKKKSDKDRGGSKSGKGGSKSGKEQQSKEPEPEVFWAPAKLTAKSWADVDDEDDDDYYATTAPPPSVWGSSQQQKSEEKSAHVEESESEEDILDEGDDDVEEENDHEPEA-PVQPEPVVKKALEVPVLPKETERQLSKKERKKKELEELEALLADFGVAQKDSN---GQDESREAAHEKKDGETNEEGDKKE--NVAGESKSAKKKKKKEKSAKEPQDQPASSEADNGPEEAARAEQAEEDASAVDVKERLKRMASAKKKKSSKEMDGAAKAAAHEAAARSARLAAAKKKEKNHYNQQPVR 323
BLAST of Ca_01808 vs. TrEMBL
Match: B9RS86_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0804290 PE=4 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.797e-34 Identity = 120/334 (35.93%), Postives = 137/334 (41.02%), Query Frame = 1 Query: 1 MVGGGSRRDDGSLVISNTNVFAALDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ----VFWAPAPLNATSWAXXXXXXX--YYATTAPPQAVWSVSDSQTSKDKQEIFEDTXXXXXXXXXXXXXXXXXXXXXXXXH----TVKPEPEDKKHAEVPVAPKEAERQXXXXXXXXXXXXXXXXXXADFGVTQKESNDGQGQHESQGTPQDKKGVEADGDGEKKEIPXXXXXXXXXXXXXXXXXXXXXXNGQTNSSETNNEPDLASGTE-NADEDSSVVDVKERLXXXXXXXXXXXXXEMDXXXXXXXXXXXXXXXXXXXXKKKEKNHYNQQPVR 969
MVGGG RRDD +NTNVFAAL+TL + VFWAPAPLNA SWA YYATTAPPQAVW S+ Q S DK + + H V EP KK EV PKE ERQ ADFGV QK+SN GQ ES+ Q+ K E +GEKKE Q+ +SE +N PD A+GTE +ED+S VD+KERL EMD KKKEKNHYNQQPVR
Sbjct: 1 MVGGG-RRDDVP-GFNNTNVFAALETLRKKKKSDKERGSSKKGSSKSRESSQEQQKETEPEVFWAPAPLNAKSWADVDDEDDDDYYATTAPPQAVWGSSEPQLSDDKPPVHLEESESEEDILDEGDDDVDEDHDNDNDHEPDVPVHAEPVVKKLPEVSAVPKETERQLSKKERKKKELEELEALLADFGVAQKDSN---GQEESRDAVQEGKDAEPTIEGEKKESAAGESKSAKKKKKKDKSKEVKETQDQSMNSEISNGPDEAAGTEQQVEEDASAVDMKERLKRMASAKKKKSSKEMDAAAKAAAQEAAARSARLAAAKKKEKNHYNQQPVR 329 The following BLAST results are available for this feature:
BLAST of Ca_01808 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25 Position : 0 Zoom : x 1
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BLAST of Ca_01808 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_01808_v1.0_kabuli ID=Ca_01808_v1.0_kabuli; Name=Ca_01808; organism=Cicer arietinum; type=mRNA; length=972bpback to top protein sequence of Ca_01808_v1.0_kabuli >Ca_01808_v1.0_kabuli ID=Ca_01808_v1.0_kabuli; Name=Ca_01808_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=323bpback to top mRNA from alignment at Ca5:34384400..34387122+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_01808_v1.0_kabuli ID=Ca_01808_v1.0_kabuli; Name=Ca_01808; organism=Cicer arietinum; type=mRNA; length=2723bp; location=Sequence derived from: Ca5:34384400..34387122+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:34384400..34387122+ >Ca_01808_v1.0_kabuli ID=Ca_01808_v1.0_kabuli; Name=Ca_01808; organism=Cicer arietinum; type=CDS; length=972bp; location=Sequence derived from: Ca5:34384400..34387122+ (Cicer arietinumback to top |