Ca_01841, Ca_01841_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_01841
Unique NameCa_01841_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length579
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca5chromosomeCa5:34072790..34075182 +Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cavuR422Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR434Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR428Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR512Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ancaL0103Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0331Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0383Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0765Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0773Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL553Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL751Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR353Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR388Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR400Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR418Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR402Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR420Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR409Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR431Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR438Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR464Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR387Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR421Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR182Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR189Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL546Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL748Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR374Cicer arietinum
cacarR393Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-TanjilR_32968Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Va04G062040.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Tiffany.R1.2g153280.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun09g200500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.model.Chr09.1696Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Hedin2.R1.2g189720.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
jg55527.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Phvul.009G101700.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat05G0089400-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
LR48_mrnaVigan04g209400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_014643827.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004501182.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_01841-CDS1Ca_01841-CDS1Cicer arietinumCDS
Ca_01841-CDS2Ca_01841-CDS2Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_01841_v1.0_kabuliCa_01841_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_01841 vs. SwissProt
Match: PTRD1_BOVIN (Putative peptidyl-tRNA hydrolase PTRHD1 OS=Bos taurus GN=PTRHD1 PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.346e-26
Identity = 60/126 (47.62%), Postives = 80/126 (63.49%), Query Frame = 1 
Query:  208 SSYSNADVLVQYVVLRRDLID---TWPLGSVVTQGCHASVSAIWSNKDDPSTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWVEQPENIPTCLATKPYPKSIVSSYFKKLKLCK 576
            +S     +LVQY+VLR+DL     +WP G+VV Q CHA+ +A+  ++D P T  Y    +++ M KV LE   E  +K L+E L    I HKLW+EQPENIPTC+A +PYPK  VS Y KK +L K
Sbjct:   17 ASGGEPQILVQYLVLRKDLTQPPFSWPAGAVVAQACHAATAALHLHRDHPHTAAYLR--ELERMRKVVLEAPDETTLKLLAETLQQKNIDHKLWMEQPENIPTCIALRPYPKEEVSQYLKKFRLFK 140
[Close]
BLAST of Ca_01841 vs. SwissProt
Match: PTRD1_HUMAN (Putative peptidyl-tRNA hydrolase PTRHD1 OS=Homo sapiens GN=PTRHD1 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.681e-24
Identity = 57/126 (45.24%), Postives = 78/126 (61.90%), Query Frame = 1 
Query:  208 SSYSNADVLVQYVVLRRDLID---TWPLGSVVTQGCHASVSAIWSNKDDPSTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWVEQPENIPTCLATKPYPKSIVSSYFKKLKLCK 576
            +S +   VLVQY+VLR+DL     +WP G++V Q CHA+ +A+ +++D P T  Y    ++  M KV LE   E  +K L+E L    I H LW+EQPENI TC+A +PYPK  V  Y KK +L K
Sbjct:   17 ASGAEPQVLVQYLVLRKDLSQAPFSWPAGALVAQACHAATAALHTHRDHPHTAAYLQ--ELGRMRKVVLEAPDETTLKELAETLQQKNIDHMLWLEQPENIATCIALRPYPKEEVGQYLKKFRLFK 140
[Close]
BLAST of Ca_01841 vs. SwissProt
Match: PTRD1_MOUSE (Putative peptidyl-tRNA hydrolase PTRHD1 OS=Mus musculus GN=Ptrhd1 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.745e-24
Identity = 56/119 (47.06%), Postives = 75/119 (63.03%), Query Frame = 1 
Query:  229 VLVQYVVLRRDLID---TWPLGSVVTQGCHASVSAIWSNKDDPSTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWVEQPENIPTCLATKPYPKSIVSSYFKKLKLCK 576
            +LVQY+VLR+DL     +WP G++V Q CHA+ +A+  ++D P T  Y    ++  M KV LE   E  +K L+E L    I H LW+EQPENI TC+A +PYPK  VS Y KK +L K
Sbjct:   24 ILVQYLVLRKDLSQAPFSWPTGALVAQACHAATAALHLHRDHPHTAAYLR--ELGRMRKVVLEAADETTLKELAETLQQKNIDHTLWLEQPENIATCIALRPYPKEEVSQYLKKFRLFK 140
[Close]
BLAST of Ca_01841 vs. TrEMBL
Match: G7JCD9_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g108900 PE=4 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 3.641e-77
Identity = 149/192 (77.60%), Postives = 163/192 (84.90%), Query Frame = 1 
Query:    1 MACTFSSIRLFNPSGSHLAYSTTKSSVAVPHLFQATSFSNRASRLTSYSMSQPVAETDSSTLSTPNDAPSSYSNADVLVQYVVLRRDLIDTWPLGSVVTQGCHASVSAIWSNKDDPSTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWVEQPENIPTCLATKPYPKSIVSSYFKKLKLCK 576
            MA T  ++RLFNPSGS+LA+S TK SV +     A SFSN+ S+L   SMSQP A TDS+ LSTP D+P    N DV+VQYVVLRRDLIDTWPLGSVVTQGCHASVSA+W NKDDP T+DYCSP+KIDSM KVTLEVKGE QIKNLSEKLTSGGIIHKLW+EQPENIPTCLATKPYPKSIVSSYFKKLKLCK
Sbjct:   23 MAYTIPTLRLFNPSGSYLAFSRTKFSVTL----HAASFSNKTSQLNRNSMSQPAA-TDSTNLSTPTDSPE---NVDVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSAVWFNKDDPVTIDYCSPEKIDSMRKVTLEVKGELQIKNLSEKLTSGGIIHKLWIEQPENIPTCLATKPYPKSIVSSYFKKLKLCK 206
[Close]
BLAST of Ca_01841 vs. TrEMBL
Match: K7KIR4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 4.922e-74
Identity = 140/174 (80.46%), Postives = 152/174 (87.36%), Query Frame = 1 
Query:   55 AYSTTKSSVAVPHLFQATSFSNRASRLTSYSMSQPVAETDSSTLSTPNDAPSSYSNADVLVQYVVLRRDLIDTWPLGSVVTQGCHASVSAIWSNKDDPSTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWVEQPENIPTCLATKPYPKSIVSSYFKKLKLCK 576
            A S +   V + HL +A SFSNRASRL+S SMSQ  A  D + ++T NDAPS   NADV+VQYVVLRRDLIDTWPLGSVVTQGCHASVSA+WSNK+DP TVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLT+GGIIHKLW+EQPENIPTCLATKPYPKS VSSYFKKLKLCK
Sbjct:    7 ALSISVIRVTLTHL-RAPSFSNRASRLSSNSMSQSAATADPNAIATTNDAPSQPENADVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSAVWSNKEDPFTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTAGGIIHKLWIEQPENIPTCLATKPYPKSSVSSYFKKLKLCK 179
[Close]
BLAST of Ca_01841 vs. TrEMBL
Match: K7KIR2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 1.870e-73
Identity = 139/173 (80.35%), Postives = 151/173 (87.28%), Query Frame = 1 
Query:   55 AYSTTKSSVAVPHLFQATSFSNRASRLTSYSMSQPVAETDSSTLSTPNDAPSSYSNADVLVQYVVLRRDLIDTWPLGSVVTQGCHASVSAIWSNKDDPSTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWVEQPENIPTCLATKPYPKSIVSSYFKKLKLC 573
            A S +   V + HL +A SFSNRASRL+S SMSQ  A  D + ++T NDAPS   NADV+VQYVVLRRDLIDTWPLGSVVTQGCHASVSA+WSNK+DP TVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLT+GGIIHKLW+EQPENIPTCLATKPYPKS VSSYFKKLKLC
Sbjct:    7 ALSISVIRVTLTHL-RAPSFSNRASRLSSNSMSQSAATADPNAIATTNDAPSQPENADVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSAVWSNKEDPFTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTAGGIIHKLWIEQPENIPTCLATKPYPKSSVSSYFKKLKLC 178
[Close]
BLAST of Ca_01841 vs. TrEMBL
Match: K7KIR5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 2.068e-72
Identity = 138/172 (80.23%), Postives = 150/172 (87.21%), Query Frame = 1 
Query:   55 AYSTTKSSVAVPHLFQATSFSNRASRLTSYSMSQPVAETDSSTLSTPNDAPSSYSNADVLVQYVVLRRDLIDTWPLGSVVTQGCHASVSAIWSNKDDPSTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWVEQPENIPTCLATKPYPKSIVSSYFKKLKL 570
            A S +   V + HL +A SFSNRASRL+S SMSQ  A  D + ++T NDAPS   NADV+VQYVVLRRDLIDTWPLGSVVTQGCHASVSA+WSNK+DP TVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLT+GGIIHKLW+EQPENIPTCLATKPYPKS VSSYFKKLKL
Sbjct:    7 ALSISVIRVTLTHL-RAPSFSNRASRLSSNSMSQSAATADPNAIATTNDAPSQPENADVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSAVWSNKEDPFTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTAGGIIHKLWIEQPENIPTCLATKPYPKSSVSSYFKKLKL 177
[Close]
BLAST of Ca_01841 vs. TrEMBL
Match: K7KIR3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 2.068e-72
Identity = 138/172 (80.23%), Postives = 150/172 (87.21%), Query Frame = 1 
Query:   55 AYSTTKSSVAVPHLFQATSFSNRASRLTSYSMSQPVAETDSSTLSTPNDAPSSYSNADVLVQYVVLRRDLIDTWPLGSVVTQGCHASVSAIWSNKDDPSTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWVEQPENIPTCLATKPYPKSIVSSYFKKLKL 570
            A S +   V + HL +A SFSNRASRL+S SMSQ  A  D + ++T NDAPS   NADV+VQYVVLRRDLIDTWPLGSVVTQGCHASVSA+WSNK+DP TVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLT+GGIIHKLW+EQPENIPTCLATKPYPKS VSSYFKKLKL
Sbjct:    7 ALSISVIRVTLTHL-RAPSFSNRASRLSSNSMSQSAATADPNAIATTNDAPSQPENADVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSAVWSNKEDPFTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTAGGIIHKLWIEQPENIPTCLATKPYPKSSVSSYFKKLKL 177
[Close]
BLAST of Ca_01841 vs. TrEMBL
Match: I1K946_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2)

HSP 1 Score: 254.218 bits (648), Expect = 1.435e-65
Identity = 129/174 (74.14%), Postives = 142/174 (81.61%), Query Frame = 1 
Query:   55 AYSTTKSSVAVPHLFQATSFSNRASRLTSYSMSQPVAETDSSTLSTPNDAPSSYSNADVLVQYVVLRRDLIDTWPLGSVVTQGCHASVSAIWSNKDDPSTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWVEQPENIPTCLATKPYPKSIVSSYFKKLKLCK 576
            A+ +T     +PHL  A S S+R S L+S SMSQP                ++ ++ADV+VQYVVLRRDLIDTWPLGSVVTQGCHASVSA+W NKDDP TVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLT+GGIIHKLW+EQPENIPTCLATKPYPKSIVSSYFKKLKLCK
Sbjct:   21 AFPSTTIRATLPHL-HAPSISSRPSPLSSNSMSQP----------------ATTNHADVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSAVWFNKDDPFTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTAGGIIHKLWIEQPENIPTCLATKPYPKSIVSSYFKKLKLCK 177
[Close]
BLAST of Ca_01841 vs. TrEMBL
Match: M5XGD1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013172mg PE=4 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 1.699e-58
Identity = 112/143 (78.32%), Postives = 121/143 (84.62%), Query Frame = 1 
Query:  148 MSQPVAETDSSTLSTPNDAPSSYSNADVLVQYVVLRRDLIDTWPLGSVVTQGCHASVSAIWSNKDDPSTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWVEQPENIPTCLATKPYPKSIVSSYFKKLKLCK 576
            MSQP AE +S       D   S +  DVLVQYVVLRRDLIDTWP GSVVTQGCHASVSAIWS+KDDP T+ YCSP+ IDSMHKVTLEVKGEPQI NLSEKLT+GGI HKLW+EQPEN PTCLATKPYPKS+VS+YFKKLKLCK
Sbjct:    1 MSQPAAEANS-------DTSKSETPPDVLVQYVVLRRDLIDTWPTGSVVTQGCHASVSAIWSHKDDPHTLQYCSPENIDSMHKVTLEVKGEPQILNLSEKLTAGGIAHKLWIEQPENYPTCLATKPYPKSVVSAYFKKLKLCK 136
[Close]
BLAST of Ca_01841 vs. TrEMBL
Match: B9RNM5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0918980 PE=4 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 4.628e-56
Identity = 107/152 (70.39%), Postives = 125/152 (82.24%), Query Frame = 1 
Query:  121 RASRLTSYSMSQPVAETDSSTLSTPNDAPSSYSNADVLVQYVVLRRDLIDTWPLGSVVTQGCHASVSAIWSNKDDPSTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWVEQPENIPTCLATKPYPKSIVSSYFKKLKLCK 576
            R +RL + SMSQ  +E+D++  S   +A       DVLVQYVVLRRDLIDTWP+GSVVTQGCHASVSAIW NKDDP T+ YCSP+ ID MHKVTLEVKGE Q+ NLSEKLT+ GI+HKLW+EQPENIPTCLAT+PYPKS ++ +FKKLKLCK
Sbjct:   36 RTTRLGTNSMSQSSSESDAAN-SKNGEARGEIQPEDVLVQYVVLRRDLIDTWPMGSVVTQGCHASVSAIWENKDDPHTLQYCSPENIDFMHKVTLEVKGEAQMLNLSEKLTAAGIVHKLWIEQPENIPTCLATRPYPKSALTLFFKKLKLCK 186
[Close]
BLAST of Ca_01841 vs. TrEMBL
Match: B9ILE9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_680611 PE=4 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 6.683e-55
Identity = 102/136 (75.00%), Postives = 118/136 (86.76%), Query Frame = 1 
Query:  169 TDSSTLSTPNDAPSSYSNADVLVQYVVLRRDLIDTWPLGSVVTQGCHASVSAIWSNKDDPSTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWVEQPENIPTCLATKPYPKSIVSSYFKKLKLCK 576
            T  S  +  N+   + ++ +VLVQYVVLRRDLIDTWP+GSVVTQGCHASVSAIWS+K+DP T+ YCSP+ IDSMHKVTLEVKGEPQI NLSEKL +GGI HKLW+EQPENIPTCLATKPYPKS+V+ +FKKLKLCK
Sbjct:    5 TTDSEPNPQNEEKKAGNSDEVLVQYVVLRRDLIDTWPMGSVVTQGCHASVSAIWSHKEDPHTLQYCSPENIDSMHKVTLEVKGEPQILNLSEKLKAGGIAHKLWIEQPENIPTCLATKPYPKSVVALFFKKLKLCK 140
[Close]
BLAST of Ca_01841 vs. TrEMBL
Match: K4DHB2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc12g096390.1 PE=4 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 8.728e-55
Identity = 116/187 (62.03%), Postives = 140/187 (74.87%), Query Frame = 1 
Query:   31 FNPS---GSHLAYSTT--KSSVAVPHLFQATSFSNRASRLTSYSMSQPVAETDSSTLSTPNDAPSSYSNADVLVQYVVLRRDLIDTWPLGSVVTQGCHASVSAIWSNKDDPSTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWVEQPENIPTCLATKPYPKSIVSSYFKKLKLCK 576
            F+PS      L +STT  + +V V    ++TS S      T+ ++S   A  D++T  + +   SS +  D +VQYVVLRRDLIDTWPLGSVVTQGCHA+V+AIWS+KDD  T+ YCSP  IDSMHKVTLEVKGE QI NL+EKL +GGI HKLW+EQPENIPTCLATKPYPKS+VSS+FKKLKLCK
Sbjct:   17 FSPSLAPAIQLTFSTTFRRRNVGVVSRMESTSISPSGGSGTT-AVSAIAAGGDATTTGSNSTEESSIT--DTVVQYVVLRRDLIDTWPLGSVVTQGCHAAVAAIWSHKDDAVTLQYCSPSNIDSMHKVTLEVKGETQILNLAEKLKAGGIAHKLWIEQPENIPTCLATKPYPKSLVSSFFKKLKLCK 200
[Close]
BLAST of Ca_01841 vs. DB:Swiss
Match: PTRD1_BOVIN (Putative peptidyl-tRNA hydrolase PTRHD1 OS=Bos taurus OX=9913 GN=PTRHD1 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.507e-29
Identity = 60/126 (47.62%), Postives = 80/126 (63.49%), Query Frame = 1 
Query:  208 SSYSNADVLVQYVVLRRDLID---TWPLGSVVTQGCHASVSAIWSNKDDPSTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWVEQPENIPTCLATKPYPKSIVSSYFKKLKLCK 576
            +S     +LVQY+VLR+DL     +WP G+VV Q CHA+ +A+  ++D P T  Y    +++ M KV LE   E  +K L+E L    I HKLW+EQPENIPTC+A +PYPK  VS Y KK +L K
Sbjct:   17 ASGGEPQILVQYLVLRKDLTQPPFSWPAGAVVAQACHAATAALHLHRDHPHTAAYLR--ELERMRKVVLEAPDETTLKLLAETLQQKNIDHKLWMEQPENIPTCIALRPYPKEEVSQYLKKFRLFK 140
[Close]
BLAST of Ca_01841 vs. DB:Swiss
Match: PTRD1_HUMAN (Putative peptidyl-tRNA hydrolase PTRHD1 OS=Homo sapiens OX=9606 GN=PTRHD1 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.324e-26
Identity = 57/126 (45.24%), Postives = 78/126 (61.90%), Query Frame = 1 
Query:  208 SSYSNADVLVQYVVLRRDLID---TWPLGSVVTQGCHASVSAIWSNKDDPSTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWVEQPENIPTCLATKPYPKSIVSSYFKKLKLCK 576
            +S +   VLVQY+VLR+DL     +WP G++V Q CHA+ +A+ +++D P T  Y    ++  M KV LE   E  +K L+E L    I H LW+EQPENI TC+A +PYPK  V  Y KK +L K
Sbjct:   17 ASGAEPQVLVQYLVLRKDLSQAPFSWPAGALVAQACHAATAALHTHRDHPHTAAYLQ--ELGRMRKVVLEAPDETTLKELAETLQQKNIDHMLWLEQPENIATCIALRPYPKEEVGQYLKKFRLFK 140
[Close]
BLAST of Ca_01841 vs. DB:Swiss
Match: PTRD1_MOUSE (Putative peptidyl-tRNA hydrolase PTRHD1 OS=Mus musculus OX=10090 GN=Ptrhd1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.383e-26
Identity = 56/120 (46.67%), Postives = 75/120 (62.50%), Query Frame = 1 
Query:  226 DVLVQYVVLRRDLID---TWPLGSVVTQGCHASVSAIWSNKDDPSTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWVEQPENIPTCLATKPYPKSIVSSYFKKLKLCK 576
             +LVQY+VLR+DL     +WP G++V Q CHA+ +A+  ++D P T  Y    ++  M KV LE   E  +K L+E L    I H LW+EQPENI TC+A +PYPK  VS Y KK +L K
Sbjct:   23 QILVQYLVLRKDLSQAPFSWPTGALVAQACHAATAALHLHRDHPHTAAYLR--ELGRMRKVVLEAADETTLKELAETLQQKNIDHTLWLEQPENIATCIALRPYPKEEVSQYLKKFRLFK 140
The following BLAST results are available for this feature:
BLAST of Ca_01841 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
PTRD1_BOVIN2.346e-2647.62Putative peptidyl-tRNA hydrolase PTRHD1 OS=Bos tau... [more]
PTRD1_HUMAN1.681e-2445.24Putative peptidyl-tRNA hydrolase PTRHD1 OS=Homo sa... [more]
PTRD1_MOUSE3.745e-2447.06Putative peptidyl-tRNA hydrolase PTRHD1 OS=Mus mus... [more]
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BLAST of Ca_01841 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7JCD9_MEDTR3.641e-7777.60Putative uncharacterized protein OS=Medicago trunc... [more]
K7KIR4_SOYBN4.922e-7480.46Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
K7KIR2_SOYBN1.870e-7380.35Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
K7KIR5_SOYBN2.068e-7280.23Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
K7KIR3_SOYBN2.068e-7280.23Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I1K946_SOYBN1.435e-6574.14Uncharacterized protein OS=Glycine max PE=4 SV=2[more]
M5XGD1_PRUPE1.699e-5878.32Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
B9RNM5_RICCO4.628e-5670.39Putative uncharacterized protein OS=Ricinus commun... [more]
B9ILE9_POPTR6.683e-5575.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
K4DHB2_SOLLC8.728e-5562.03Uncharacterized protein OS=Solanum lycopersicum GN... [more]

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BLAST of Ca_01841 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
PTRD1_BOVIN5.507e-2947.62Putative peptidyl-tRNA hydrolase PTRHD1 OS=Bos tau... [more]
PTRD1_HUMAN1.324e-2645.24Putative peptidyl-tRNA hydrolase PTRHD1 OS=Homo sa... [more]
PTRD1_MOUSE6.383e-2646.67Putative peptidyl-tRNA hydrolase PTRHD1 OS=Mus mus... [more]
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002833Peptidyl-tRNA hydrolase, PTH2PFAMPF01981PTH2coord: 79..190
score: 7.6
IPR017867Protein-tyrosine phosphatase, low molecular weightPANTHERPTHR11717FAMILY NOT NAMEDcoord: 47..192
score: 6.6
IPR023476Peptidyl-tRNA hydrolase II domainGENE3D3.40.1490.10no descriptioncoord: 80..191
score: 5
IPR023476Peptidyl-tRNA hydrolase II domainSUPERFAMILY102462Peptidyl-tRNA hydrolase IIcoord: 77..191
score: 3.4
NoneNo IPR availablePANTHERPTHR11717:SF2UNKNOWN PROTEIN, RELATED TO LMW-PTPcoord: 47..192
score: 6.6

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_01841_v1.0_kabuli ID=Ca_01841_v1.0_kabuli; Name=Ca_01841; organism=Cicer arietinum; type=mRNA; length=579bp
ATGGCTTGCACATTTTCATCGATTCGTCTCTTCAACCCCTCCGGTTCGCA
CCTCGCTTACTCAACCACCAAGTCTAGTGTCGCTGTTCCGCATTTATTTC
AAGCGACCTCTTTCTCGAACCGGGCGAGTCGACTCACCTCTTACTCAATG
AGTCAACCCGTCGCCGAAACCGATTCGAGCACTCTCTCCACGCCTAACGA
CGCGCCGTCATCGTATTCAAACGCCGATGTTTTGGTCCAGTACGTTGTCC
TCCGGCGAGACCTGATCGATACTTGGCCATTAGGAAGTGTTGTTACTCAA
GGTTGCCACGCTTCTGTTTCCGCTATTTGGTCCAATAAAGACGATCCTTC
CACCGTTGATTATTGCAGCCCTGATAAAATTGATTCTATGCACAAAGTCA
CACTTGAAGTGAAGGGAGAACCACAGATCAAAAACTTGTCTGAGAAGTTG
ACATCTGGTGGGATCATTCACAAACTTTGGGTTGAGCAACCTGAAAACAT
ACCTACTTGCCTTGCCACAAAACCTTACCCTAAGTCAATTGTATCTTCGT
ATTTTAAGAAGTTGAAACTCTGCAAGTGA
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protein sequence of Ca_01841_v1.0_kabuli

>Ca_01841_v1.0_kabuli ID=Ca_01841_v1.0_kabuli; Name=Ca_01841_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=192bp
MACTFSSIRLFNPSGSHLAYSTTKSSVAVPHLFQATSFSNRASRLTSYSM
SQPVAETDSSTLSTPNDAPSSYSNADVLVQYVVLRRDLIDTWPLGSVVTQ
GCHASVSAIWSNKDDPSTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKL
TSGGIIHKLWVEQPENIPTCLATKPYPKSIVSSYFKKLKLCK
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mRNA from alignment at Ca5:34072790..34075182+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_01841_v1.0_kabuli ID=Ca_01841_v1.0_kabuli; Name=Ca_01841; organism=Cicer arietinum; type=mRNA; length=2393bp; location=Sequence derived from: Ca5:34072790..34075182+ (Cicer arietinum
ATGGCTTGCACATTTTCATCGATTCGTCTCTTCAACCCCTCCGGTTCGCA
CCTCGCTTACTCAACCACCAAGTCTAGTGTCGCTGTTCCGCATTTATTTC
AAGCGACCTCTTTCTCGAACCGGGCGAGTCGACTCACCTCTTACTCAATG
AGTCAACCCGTCGCCGAAACCGATTCGAGCACTCTCTCCACGCCTAACGA
CGCGCCGTCATCGTATTCAAACGCCGATGTTTTGGTCCAGTACGTTGTCC
TCCGGCGAGACCTGATCGATACTTGGCCATTAGGAAGTGTTGTTACTCAA
GGTTGCCACGCTTCTGTTTCCGCTATTTGGTCCAATAAAGACGATCCTTC
CACCGTTGATTATTGCAGCCCTGATAAAATTGATTCTATGCACAAAGTAA
GGTTTTCTCCTTTTTTTTTTCTTTTTCTTTTTCAATGTAGACTTTCTAGG
TTTTAAAATTTGTTTGATTATAGGGTTTTCTAGTTCAATTTCGAAAGTGA
ACGAGTACTATATAGTGAGCCTTGCTTTGTCTTATATAGTTCCTAATTCC
AATACCAGAAGTTATGTTGTCACCTGCCACTAGCAGCGATGTCATGGCCA
AATAAGTTTTAGTGTAAAAATCATGTTTAGACTCAATAGCTTCAAACTAA
AATCAATTATGGAGTCAAAATCAATTCTACTCGATAACATCCAAACATGT
CAAAATTGACTTCTCTAAACCCTAAACCATAAACCCTAAACCCTAAACTA
AAAGTGGAACCATACATGCACTAAGTATATAGTGTATTGTGGAAAAATAA
TAATTTGTTTAAATTTTGCTGCGACATAGCATTCAGCTTTGCTTTAGCTA
CTATTTGATGACTAGTCACAAGTAGTGCATAGAATCCTTGTCCATTGCAG
TAAATGATTGCTTGAAACCAAATAGAGTAGTGAAAGTAAAAACGATGAGT
ATAGAATTTGTAACTGGTATTGCTCTTGCTAAACATTAGGTATTAAGATG
AAAAGCACGAAGATATTCAAGATATTTAGAATAGTAGAATTAGGTAACTT
GTGATAGTAATGGGAATTGATGGATGGCATTAAGTTAGATTGTTAGAAAT
GGTTAATTTGTAATAAAATGGTTTTATAGAAACCATGGTAACGAATGTCT
CCAGTTTAATTTACCCCCTTTTTATTTTTATTTTTCTATGCACAATTTTT
GCTTGGACAAAACAAAGTTGATTTATCATCATGTGAATATGTCATTTGTG
GTTGGGCTTTCTATGGTGCATTTTGCATGGGGTTTGCTATTAGTCTATTG
AATGTTTAACTGATCTAGGCGTTTTGCATGTATAAGATAGATGAAGGGTC
ATTTCTGTGCATAAGGCAAACTAGAAGTGCTTGTTGCCCTTTTTTGCCTT
TGTTAGTTCAACAATTTGTTAAGATAAACAAAGGTCTAACATTTAGTTAA
AAAGGGTCAAGCTTTGTTTTGTATCTTCCATGACATTAAAACTTTATTTG
CGTTATGATTTTCGTATTCAATTTTCATTTGTTCAACTATGGCTCAATCA
TGGTGGGACTAGTGAATTGCAATGTTCACATCATGGTTAACTTTATTAGT
TTGTACTTAAGGCTTTCCAAGTAATTGCTCTGGATACATCAAATTTGGTG
TCTGCGTTGTATTTCTATGTGATATATGCTCATTACCATGAACAATTCAC
ACGCTTTTGTGGGGACCTACTTTGGGGCTCTGCCCATAACATAAAACTTT
GAGTTTGCTTTGCTTATGCTAGATACCGCAATTTCCATTTTGAGAATTTG
GATATTTTGAACTTGTCATGTTTAAAGACAGAATTCGTATAAGAAATGTG
ATGATAAATTAAAGTTGAAAGGACAAATATGGAGTTAAAACTTAATAGTC
GCTGAAATATGGTACTTGTTAAATCTTTATAGGAGTTCATGTTTCATTCT
TCAACATTTTTATGTTCAGTAGGCAGTTAATGTATCTGCACAACATTTGT
GACTTTCTGCTGTTGCTAGGGATTGTGCCATTTGACATCAGCATTGTTGT
TTTAATTTATCCAGTTATCTATCATTCTATGATGTAGTGTCTGTCTGTGC
ACAAATGCATATATGCAGTTTCTATTCAAGAGCTATATAGCTCTAATTCA
TGTTCGTTGCAGCATAGCATCTGATTTATGAATTAACTGGATAATGAACT
TATACTCCAGGTCACACTTGAAGTGAAGGGAGAACCACAGATCAAAAACT
TGTCTGAGAAGTTGACATCTGGTGGGATCATTCACAAACTTTGGGTTGAG
CAACCTGAAAACATACCTACTTGCCTTGCCACAAAACCTTACCCTAAGTC
AATTGTATCTTCGTATTTTAAGAAGTTGAAACTCTGCAAGTGA
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Coding sequence (CDS) from alignment at Ca5:34072790..34075182+

>Ca_01841_v1.0_kabuli ID=Ca_01841_v1.0_kabuli; Name=Ca_01841; organism=Cicer arietinum; type=CDS; length=579bp; location=Sequence derived from: Ca5:34072790..34075182+ (Cicer arietinum
ATGGCTTGCACATTTTCATCGATTCGTCTCTTCAACCCCTCCGGTTCGCA
CCTCGCTTACTCAACCACCAAGTCTAGTGTCGCTGTTCCGCATTTATTTC
AAGCGACCTCTTTCTCGAACCGGGCGAGTCGACTCACCTCTTACTCAATG
AGTCAACCCGTCGCCGAAACCGATTCGAGCACTCTCTCCACGCCTAACGA
CGCGCCGTCATCGTATTCAAACGCCGATGTTTTGGTCCAGTACGTTGTCC
TCCGGCGAGACCTGATCGATACTTGGCCATTAGGAAGTGTTGTTACTCAA
GGTTGCCACGCTTCTGTTTCCGCTATTTGGTCCAATAAAGACGATCCTTC
CACCGTTGATTATTGCAGCCCTGATAAAATTGATTCTATGCACAAAGTCA
CACTTGAAGTGAAGGGAGAACCACAGATCAAAAACTTGTCTGAGAAGTTG
ACATCTGGTGGGATCATTCACAAACTTTGGGTTGAGCAACCTGAAAACAT
ACCTACTTGCCTTGCCACAAAACCTTACCCTAAGTCAATTGTATCTTCGT
ATTTTAAGAAGTTGAAACTCTGCAAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002833PTH2
IPR017867Tyr_phospatase_low_mol_wt
IPR023476Pep_tRNA_hydro_II_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0004045aminoacyl-tRNA hydrolase activity
GO:0004725protein tyrosine phosphatase activity
Vocabulary: Biological Process
TermDefinition
GO:0006470protein dephosphorylation