Ca_01922, Ca_01922_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_01922
Unique NameCa_01922_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length498
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca5chromosomeCa5:33327368..33327865 +Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR381Pisum sativum Cameor genome v1aPisum sativum
capsR382Pisum sativum Cameor genome v1aPisum sativum
cavuR392Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR434Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR440Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR512Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0565Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0715Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0331Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0383Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0765Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0960Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL284Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL558Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL646Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR353Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR375Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR400Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR376Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
catifR425Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR440Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR402Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR428Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR447Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR409Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR475Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR438Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR463Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR477Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR372Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR421Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR187Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR189Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR209Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR215Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL031Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL191Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL277Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL546Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL642Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR378Cicer arietinum
cacarR393Cicer arietinum
cacarR411Cicer arietinum
cacarR417Cicer arietinum
cacarR428Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Vigun09g190900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_014645265.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg55673.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Va04G060470.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Psat5g020520.1Pisum sativum Cameor genome v1aPisum sativum
Psat05G0069100-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun04g008900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-KK1_035621Cajanus cajan Asha genome v1.0Cajanus cajan
LR48_mrnaVigan04g207100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vfaba.Hedin2.R1.2g195120.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Phvul.009G111000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat5g021320.1Pisum sativum Cameor genome v1aPisum sativum
Vfaba.Tiffany.R1.2g158000.1Vicia faba cv. Tiffany genome v1.0Vicia faba
evm.model.Chr09.1784Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
LR48_mrnaVigan10g009200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Va10G001160.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_28500Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.model.Chr04.75Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.1g119280.1Vicia faba cv. Tiffany genome v1.0Vicia faba

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004501084.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_004512974.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_01922-CDS1Ca_01922-CDS1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_01922_v1.0_kabuliCa_01922_v1.0_kabuliCicer arietinumpolypeptide


Homology
BLAST of Ca_01922 vs. SwissProt
Match: LFS_ALLCE (Lachrymatory-factor synthase OS=Allium cepa GN=LFS PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.644e-13
Identity = 45/153 (29.41%), Postives = 73/153 (47.71%), Query Frame = 1
Query:   22 KWEGKVTVDVRNTDEKQVWSVLEDFCNLHKWIP-IDTCYQVEGIQGQPGLIRYCASTVKDDVPDSKSTIKFAKEKLLTIDPIKRCLSYEIVDNNMGFKSYVATIKVLPINDDVKGSGCKIEWGFVCDPVEGWRFQDLNSYVEFSLQFMANKIE 477
            KW GKV   + NT  +Q W++L+DF NLHK +P +  C  VEG     G +RY    +     +      +AKEKL+ +D      SY   +   G++ Y AT++++   +  +  G + +W F C  +EG         ++     +  KIE
Sbjct:   20 KWSGKVHALLPNTKPEQAWTLLKDFINLHKVMPSLSVCELVEGEANVVGCVRYVKGIMHPIEEEF-----WAKEKLVALDNKNMSYSYIFTECFTGYEDYTATMQIV---EGPEHKGSRFDWSFQCKYIEGMTESAFTEILQHWATEIGQKIE 164          
BLAST of Ca_01922 vs. TrEMBL
Match: G7J3I2_MEDTR (Lachrymatory-factor synthase OS=Medicago truncatula GN=MTR_3g109880 PE=4 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 1.973e-70
Identity = 126/169 (74.56%), Postives = 142/169 (84.02%), Query Frame = 1
Query:    1 MAEESNPKWEGKVTVDVRNTDEKQVWSVLEDFCNLHKWIPIDTCYQVEGIQGQPGLIRYCASTVK-----DDVPDSKSTIKFAKEKLLTIDPIKRCLSYEIVDNNMGFKSYVATIKVLPINDDVKGSGCKIEWGFVCDPVEGWRFQDLNSYVEFSLQFMANKIEVDLHV 492
            M EES PKWEGKVTV+VRNT E+Q W+VLEDFCNLHKWIPIDTCYQV+G+QGQPGLIRYCAS +K     D V + ++TIK+AKEKLL IDPIKRCLSYEIVDNNMGFKSYVAT+KVLP   D K +GC IEWGFVCDP+EGW  QD NSY+E+ LQFMA KIEV+  V
Sbjct:    1 MGEESIPKWEGKVTVEVRNTVEEQAWAVLEDFCNLHKWIPIDTCYQVDGVQGQPGLIRYCASNIKGVVEDDVVAEPETTIKWAKEKLLKIDPIKRCLSYEIVDNNMGFKSYVATLKVLPNEGDAKSAGCGIEWGFVCDPIEGWTLQDFNSYIEYCLQFMAKKIEVECSV 169          
BLAST of Ca_01922 vs. TrEMBL
Match: I1K9F6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 2.187e-61
Identity = 112/163 (68.71%), Postives = 134/163 (82.21%), Query Frame = 1
Query:    1 MAEESNPKWEGKVTVDVRNTDEKQVWSVLEDFCNLHKWIPIDTCYQVEGIQGQPGLIRYCASTVKDDVPDSK---STIKFAKEKLLTIDPIKRCLSYEIVDNNMGFKSYVATIKVLPINDDVKGSGCKIEWGFVCDPVEGWRFQDLNSYVEFSLQFMANKIEV 480
            MAEES PKWEGK   ++  TD +QVW+ LEDFCNLHKW PI+TCYQ+EG+ GQPGLIRYCASTV++ V  ++   +TIK+ KEKLL IDP++RCLSYEIV+NNMGFKSYVAT+KVLP+N    G GCKI+WGFVCDPVEGW FQDL  Y+E SLQ MA KI++
Sbjct:   21 MAEESKPKWEGKSVTELPGTDAEQVWTALEDFCNLHKWWPIETCYQLEGVPGQPGLIRYCASTVEEAVVGAQKTTTTIKWTKEKLLAIDPVQRCLSYEIVENNMGFKSYVATLKVLPMN----GDGCKIDWGFVCDPVEGWSFQDLKLYLESSLQSMAKKIQL 179          
BLAST of Ca_01922 vs. TrEMBL
Match: C6TN70_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.916e-57
Identity = 109/160 (68.12%), Postives = 128/160 (80.00%), Query Frame = 1
Query:    1 MAEESNPKWEGKVTVDVRNTDEKQVWSVLEDFCNLHKWIPIDTCYQVEGIQGQPGLIRYCASTVKDDVPDSK-STIKFAKEKLLTIDPIKRCLSYEIVDNNMGFKSYVATIKVLPINDDVKGSGCKIEWGFVCDPVEGWRFQDLNSYVEFSLQFMANKIE 477
            M EES  KWEGK  V+V  T  +  W+VLEDFCN+HKWI +DTCYQV+GI GQPGLIRYCASTV++ V   K +TIK+AKEK+L IDP++RCL+YE+V+NNMGFKSYVAT+KVLPI    +G GCKIEWGFV DPVEGW  Q L SYVE +LQ MA KIE
Sbjct:    1 MEEESKSKWEGKAMVEVVGTGAEVAWAVLEDFCNIHKWISLDTCYQVDGILGQPGLIRYCASTVEEGVGAEKTTTIKWAKEKILAIDPVQRCLTYEVVENNMGFKSYVATLKVLPI----EGDGCKIEWGFVSDPVEGWSCQGLKSYVESTLQSMAKKIE 156          
BLAST of Ca_01922 vs. TrEMBL
Match: A5BHR2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g03210 PE=4 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 1.051e-55
Identity = 100/163 (61.35%), Postives = 125/163 (76.69%), Query Frame = 1
Query:    1 MAEESNPKWEGKVTVDVRNTDEKQVWSVLEDFCNLHKWIP-IDTCYQVEGIQGQPGLIRYCASTVKDDVPDSKSTIKFAKEKLLTIDPIKRCLSYEIVDNNMGFKSYVATIKVLPINDDVKGSGCKIEWGFVCDPVEGWRFQDLNSYVEFSLQFMANKIEVDL 486
            MAEE+  KWEGK T ++++T   QVW  LEDFC+LHKW+P +DTCYQVEG++GQPGLIRYC+ST        ++T+ + KEKLLTIDPI  C SYE++DNNMGF SYV T KV+PIN    G GC I+W FVCDPV+GWR++DL SY++ SLQFMA K+E  L
Sbjct:    1 MAEETQFKWEGKATAELKSTKPDQVWPFLEDFCSLHKWMPSLDTCYQVEGVKGQPGLIRYCSSTAASPDNPDQTTVNWVKEKLLTIDPINHCFSYEVLDNNMGFNSYVTTFKVIPIN----GGGCLIQWSFVCDPVQGWRYEDLASYIDSSLQFMAKKMEETL 159          
BLAST of Ca_01922 vs. TrEMBL
Match: B9HE24_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_561736 PE=4 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 1.470e-49
Identity = 97/166 (58.43%), Postives = 120/166 (72.29%), Query Frame = 1
Query:    1 MAEESNPKWEGKVTVDVRNTDEKQVWSVLEDFCNLHKWIP-IDTCYQVEGIQGQPGLIRYCAS-TVKDDVPDSKSTIKFAKEKLLTIDPIKRCLSYEIVDNNMGFKSYVATIKVLPIND-DVKGS-GCKIEWGFVCDPVEGWRFQDLNSYVEFSLQFMANKIEVDL 486
            M EE+  KWEGK TV+++     QVW  LEDFCNL KW+P +DTCYQVEG  GQPGL+RYC+S T   D     + + +AKEKL+ I+P +RCLSYEI++NN GFKSYVAT+KV PIND D  G  GC IEW F+ DP+EGW  +D NSY+  SLQFM  K+E D+
Sbjct:    1 MTEETQGKWEGKATVELKGPTADQVWPFLEDFCNLQKWLPGVDTCYQVEGELGQPGLVRYCSSGTASSDGSHEGNKVIWAKEKLIMINPSERCLSYEILENNAGFKSYVATMKVSPINDGDGDGQHGCTIEWSFIADPIEGWPLEDFNSYINSSLQFMGKKMERDV 166          
BLAST of Ca_01922 vs. TrEMBL
Match: M5Y5I6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012464mg PE=4 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.920e-49
Identity = 92/161 (57.14%), Postives = 122/161 (75.78%), Query Frame = 1
Query:    1 MAEESNPK--WEGKVTVDVRNTDEKQVWSVLEDFCNLHKWIP-IDTCYQVEGIQGQPGLIRYCASTVKDDVPDSKSTIKFAKEKLLTIDPIKRCLSYEIVDNNMGFKSYVATIKVLPINDDVKGSGCKIEWGFVCDPVEGWRFQDLNSYVEFSLQFMANKI 474
            MAE+  PK  WEGK + D+  +  +QVW +L DFC+LHKW P I TCY+V+G+ GQPGLIRYCA   +  + + +STIK+AKEKLL++DPI+RCLSYEI+++N+GFKSYVA ++V+PIN      GCKIEW +VCDP+EGW   D  SY++ SLQ MA K+
Sbjct:    1 MAEDQIPKSKWEGKTSADLEGSSAEQVWPLLADFCSLHKWFPDIATCYRVDGVPGQPGLIRYCA---RAPIDNDESTIKWAKEKLLSLDPIQRCLSYEIIESNLGFKSYVAVMQVVPINGGDGSIGCKIEWSYVCDPIEGWGLNDFRSYLDSSLQLMAEKM 158          
BLAST of Ca_01922 vs. TrEMBL
Match: B9P5W1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_591276 PE=4 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.920e-49
Identity = 96/165 (58.18%), Postives = 118/165 (71.52%), Query Frame = 1
Query:    1 MAEESNPKWEGKVTVDVRNTDEKQVWSVLEDFCNLHKWIP-IDTCYQVEGIQGQPGLIRYCAS-TVKDDVPDSKSTIKFAKEKLLTIDPIKRCLSYEIVDNNMGFKSYVATIKVLPIND-DVKGS---GCKIEWGFVCDPVEGWRFQDLNSYVEFSLQFMANKIE 477
            M EE+  KWEGK TV+++     QVW  LEDFCNL KW+P +DTCYQVEG  GQPGL+RYC+S T   D     + + +AKEKL+ I+P +RCLSYEI++NN GFKSYVAT+K  PIND D  G    GCKIEW F+ DP+EGW  +D NSY+  SLQFM  K+E
Sbjct:    1 MTEETQGKWEGKATVELKGPTADQVWPFLEDFCNLQKWLPGVDTCYQVEGELGQPGLVRYCSSGTASSDGSHEGNKVIWAKEKLIMINPSERCLSYEILENNAGFKSYVATMKAFPINDGDEDGDGQHGCKIEWSFIADPIEGWPLEDFNSYINSSLQFMGQKME 165          
BLAST of Ca_01922 vs. TrEMBL
Match: A5BHR3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034796 PE=4 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 2.772e-48
Identity = 91/160 (56.88%), Postives = 117/160 (73.12%), Query Frame = 1
Query:    1 MAEESNPKWEGKVTVDVRNTDEKQVWSVLEDFCNLHKWIP-IDTCYQVEGIQGQPGLIRYCASTVKDDVPDSKSTIKFAKEKLLTIDPIKRCLSYEIVDNNMGFKSYVATIKVLPINDDVKGSGCKIEWGFVCDPVEGWRFQDLNSYVEFSLQFMANKIE 477
            + EE  P+WEGK T +++ T   QVW +LEDFC +HKW P +DT YQVEG +G+PGL RYCA+         +S +K+AKEKLLT+DPI+RC SYE++DNN+GF SYVATIKVLP++    G GC+IEW F   P+EGWR  DL S+V+  LQFMA K+E
Sbjct:   11 LMEEPEPRWEGKATAELKTTAPDQVWPLLEDFCGIHKWFPDLDTSYQVEGEKGKPGLTRYCANN------PGESGVKWAKEKLLTMDPIQRCFSYEVLDNNIGFNSYVATIKVLPVD----GGGCRIEWSFASGPIEGWRSDDLGSFVDSCLQFMAKKME 160          
BLAST of Ca_01922 vs. TrEMBL
Match: F6H2X9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g03200 PE=4 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 3.621e-48
Identity = 91/158 (57.59%), Postives = 116/158 (73.42%), Query Frame = 1
Query:    7 EESNPKWEGKVTVDVRNTDEKQVWSVLEDFCNLHKWIP-IDTCYQVEGIQGQPGLIRYCASTVKDDVPDSKSTIKFAKEKLLTIDPIKRCLSYEIVDNNMGFKSYVATIKVLPINDDVKGSGCKIEWGFVCDPVEGWRFQDLNSYVEFSLQFMANKIE 477
            EE  P+WEGK T +++ T   QVW +LEDFC +HKW P +DT YQVEG +G+PGL RYCA+         +S +K+AKEKLLT+DPI+RC SYE++DNN+GF SYVATIKVLP++    G GC+IEW F   P+EGWR  DL S+V+  LQFMA K+E
Sbjct:    2 EEPEPRWEGKATAELKTTAPDQVWPLLEDFCGIHKWFPDLDTSYQVEGEKGKPGLTRYCANN------PGESGVKWAKEKLLTMDPIQRCFSYEVLDNNIGFNSYVATIKVLPVD----GGGCRIEWSFASGPIEGWRSDDLGSFVDSCLQFMAKKME 149          
BLAST of Ca_01922 vs. TrEMBL
Match: M5XHK8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018663mg PE=4 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 4.729e-48
Identity = 95/163 (58.28%), Postives = 122/163 (74.85%), Query Frame = 1
Query:    1 MAEESNPKWEGKVTVDVRNTDEKQVWSVLEDFCNLHKWIP-IDTCYQVEGIQGQPGLIRYCASTVKDDVPDSKSTIKFAKEKLLTIDPIKRCLSYEIVDNNMGFKSYVATIKVLPIND---DVKGSGCKIEWGFVCDPVEGWRFQDLNSYVEFSLQFMANKIE 477
            M E++ PKWEG+ + D++    +QVW +L DFCNLHKW P ++T YQV GI GQPGLIRYCA+   D  PD ++TIK+ KEKLL IDPIKRCLSYEI++NNMGF SYV T++V+PI+D   DV   GCKIEW  VCDPV+GWR ++L  ++E SL  +A  +E
Sbjct:    1 MQEQTQPKWEGRTSADLKGPAAEQVWPLLADFCNLHKWFPKLETSYQVGGILGQPGLIRYCATPPAD--PDDQTTIKWVKEKLLMIDPIKRCLSYEILENNMGFHSYVGTMQVVPIHDIHHDVV-LGCKIEWWVVCDPVDGWRLENLLDFLESSLPLVAKTME 160          
BLAST of Ca_01922 vs. DB:Swiss
Match: LFS_ALLCE (Lachrymatory-factor synthase OS=Allium cepa OX=4679 GN=LFS PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.050e-14
Identity = 45/153 (29.41%), Postives = 73/153 (47.71%), Query Frame = 1
Query:   22 KWEGKVTVDVRNTDEKQVWSVLEDFCNLHKWIP-IDTCYQVEGIQGQPGLIRYCASTVKDDVPDSKSTIKFAKEKLLTIDPIKRCLSYEIVDNNMGFKSYVATIKVLPINDDVKGSGCKIEWGFVCDPVEGWRFQDLNSYVEFSLQFMANKIE 477
            KW GKV   + NT  +Q W++L+DF NLHK +P +  C  VEG     G +RY    +     +      +AKEKL+ +D      SY   +   G++ Y AT++++   +  +  G + +W F C  +EG         ++     +  KIE
Sbjct:   20 KWSGKVHALLPNTKPEQAWTLLKDFINLHKVMPSLSVCELVEGEANVVGCVRYVKGIMHPIEEEF-----WAKEKLVALDNKNMSYSYIFTECFTGYEDYTATMQIV---EGPEHKGSRFDWSFQCKYIEGMTESAFTEILQHWATEIGQKIE 164          
The following BLAST results are available for this feature:
BLAST of Ca_01922 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
LFS_ALLCE4.644e-1329.41Lachrymatory-factor synthase OS=Allium cepa GN=LFS... [more]
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BLAST of Ca_01922 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7J3I2_MEDTR1.973e-7074.56Lachrymatory-factor synthase OS=Medicago truncatul... [more]
I1K9F6_SOYBN2.187e-6168.71Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
C6TN70_SOYBN1.916e-5768.13Uncharacterized protein OS=Glycine max PE=2 SV=1[more]
A5BHR2_VITVI1.051e-5561.35Putative uncharacterized protein OS=Vitis vinifera... [more]
B9HE24_POPTR1.470e-4958.43Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
M5Y5I6_PRUPE1.920e-4957.14Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
B9P5W1_POPTR1.920e-4958.18Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A5BHR3_VITVI2.772e-4856.88Putative uncharacterized protein OS=Vitis vinifera... [more]
F6H2X9_VITVI3.621e-4857.59Putative uncharacterized protein OS=Vitis vinifera... [more]
M5XHK8_PRUPE4.729e-4858.28Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]

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BLAST of Ca_01922 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
LFS_ALLCE1.050e-1429.41Lachrymatory-factor synthase OS=Allium cepa OX=467... [more]
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Expression

Available Analyses

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Download expression dataset for this feature
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019587Polyketide cyclase/dehydrasePFAMPF10604Polyketide_cyc2coord: 13..140
score: 6.5
IPR023393START-like domainGENE3D3.30.530.20no descriptioncoord: 21..156
score: 1.8
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 6..163
score: 5.5

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_01922_v1.0_kabuli ID=Ca_01922_v1.0_kabuli; Name=Ca_01922; organism=Cicer arietinum; type=mRNA; length=498bp
ATGGCAGAGGAATCTAATCCAAAATGGGAAGGTAAAGTAACTGTTGATGT
AAGAAACACCGACGAAAAACAAGTATGGTCAGTTTTAGAAGATTTCTGCA
ACCTACACAAATGGATCCCCATAGACACGTGTTACCAAGTCGAAGGAATT
CAAGGACAACCTGGTCTTATCCGCTACTGCGCTTCCACCGTTAAAGACGA
TGTTCCTGATTCCAAGTCAACAATCAAGTTTGCAAAAGAGAAGTTATTAA
CAATTGATCCAATCAAACGTTGTTTGTCCTATGAAATTGTTGACAACAAC
ATGGGATTTAAGTCTTATGTTGCAACAATCAAAGTACTTCCAATTAATGA
TGATGTTAAAGGTTCAGGGTGTAAGATTGAGTGGGGGTTTGTTTGTGATC
CAGTGGAAGGGTGGAGATTTCAAGATCTGAATTCTTATGTTGAATTTTCT
CTCCAATTTATGGCTAATAAGATTGAGGTTGATTTGCATGTTCTGTAA
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protein sequence of Ca_01922_v1.0_kabuli

>Ca_01922_v1.0_kabuli ID=Ca_01922_v1.0_kabuli; Name=Ca_01922_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=165bp
MAEESNPKWEGKVTVDVRNTDEKQVWSVLEDFCNLHKWIPIDTCYQVEGI
QGQPGLIRYCASTVKDDVPDSKSTIKFAKEKLLTIDPIKRCLSYEIVDNN
MGFKSYVATIKVLPINDDVKGSGCKIEWGFVCDPVEGWRFQDLNSYVEFS
LQFMANKIEVDLHVL
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mRNA from alignment at Ca5:33327368..33327865+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_01922_v1.0_kabuli ID=Ca_01922_v1.0_kabuli; Name=Ca_01922; organism=Cicer arietinum; type=mRNA; length=498bp; location=Sequence derived from: Ca5:33327368..33327865+ (Cicer arietinum
ATGGCAGAGGAATCTAATCCAAAATGGGAAGGTAAAGTAACTGTTGATGT AAGAAACACCGACGAAAAACAAGTATGGTCAGTTTTAGAAGATTTCTGCA ACCTACACAAATGGATCCCCATAGACACGTGTTACCAAGTCGAAGGAATT CAAGGACAACCTGGTCTTATCCGCTACTGCGCTTCCACCGTTAAAGACGA TGTTCCTGATTCCAAGTCAACAATCAAGTTTGCAAAAGAGAAGTTATTAA CAATTGATCCAATCAAACGTTGTTTGTCCTATGAAATTGTTGACAACAAC ATGGGATTTAAGTCTTATGTTGCAACAATCAAAGTACTTCCAATTAATGA TGATGTTAAAGGTTCAGGGTGTAAGATTGAGTGGGGGTTTGTTTGTGATC CAGTGGAAGGGTGGAGATTTCAAGATCTGAATTCTTATGTTGAATTTTCT CTCCAATTTATGGCTAATAAGATTGAGGTTGATTTGCATGTTCTGTAA
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Coding sequence (CDS) from alignment at Ca5:33327368..33327865+

>Ca_01922_v1.0_kabuli ID=Ca_01922_v1.0_kabuli; Name=Ca_01922; organism=Cicer arietinum; type=CDS; length=498bp; location=Sequence derived from: Ca5:33327368..33327865+ (Cicer arietinum
ATGGCAGAGGAATCTAATCCAAAATGGGAAGGTAAAGTAACTGTTGATGT
AAGAAACACCGACGAAAAACAAGTATGGTCAGTTTTAGAAGATTTCTGCA
ACCTACACAAATGGATCCCCATAGACACGTGTTACCAAGTCGAAGGAATT
CAAGGACAACCTGGTCTTATCCGCTACTGCGCTTCCACCGTTAAAGACGA
TGTTCCTGATTCCAAGTCAACAATCAAGTTTGCAAAAGAGAAGTTATTAA
CAATTGATCCAATCAAACGTTGTTTGTCCTATGAAATTGTTGACAACAAC
ATGGGATTTAAGTCTTATGTTGCAACAATCAAAGTACTTCCAATTAATGA
TGATGTTAAAGGTTCAGGGTGTAAGATTGAGTGGGGGTTTGTTTGTGATC
CAGTGGAAGGGTGGAGATTTCAAGATCTGAATTCTTATGTTGAATTTTCT
CTCCAATTTATGGCTAATAAGATTGAGGTTGATTTGCATGTTCTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR019587Polyketide_cyclase/dehydratase
IPR023393START-like_dom_sf